TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|C27708.1|C27708 C27708 Rice callus cDNA Oryza sativa (ja... 221 9e-056
gb|AU092630.1|AU092630 AU092630 Rice callus Oryza sativa (j... 221 9e-056
gb|AU161115.1|AU161115 AU161115 Rice callus Oryza sativa (j... 221 9e-056
gb|CV729204.1|CV729204 FLO--01-O20.b1 Rice flower lambda ph... 221 9e-056
dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA... 221 9e-056
gb|CF314982.1|CF314982 HD--03-L17.b1 OsHDAC1-overexpressing... 194 1e-052
gb|CF333220.1|CF333220 JMT--02-A13.b1 AtJMT-overexpressing ... 192 5e-051
gb|CV729205.1|CV729205 FLO--01-O20.g1 Rice flower lambda ph... 204 8e-051
gb|CF333221.1|CF333221 JMT--02-A13.g1 AtJMT-overexpressing ... 179 1e-049
gb|CF314983.1|CF314983 HD--03-L17.g1 OsHDAC1-overexpressing... 178 3e-049
gb|C27943.1|C27943 C27943 Rice callus cDNA Oryza sativa (ja... 194 2e-048
gb|AACV01011724.1| Oryza sativa (japonica cultivar-group) c... 95 6e-044
gb|AU058316.2|AU058316 AU058316 Oryza sativa Nipponbare imm... 177 1e-042
gb|AC104271.2| Oryza sativa (japonica cultivar-group) chrom... 95 3e-042
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 95 1e-039
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 95 1e-039
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 95 2e-037
dbj|AP004365.3| Oryza sativa (japonica cultivar-group) geno... 95 2e-037
gb|AACV01003094.1| Oryza sativa (japonica cultivar-group) c... 95 2e-037
gb|CA756409.1|CA756409 BR030041000_PLATE_G11_87_087.ab1 OA ... 112 2e-034
ref|NM_189410.1| Oryza sativa (japonica cultivar-group), p... 119 4e-025
dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA... 116 2e-024
>gb|C27708.1|C27708 C27708 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52661_1A, mRNA sequence
Length = 468
Score = 221 bits (476), Expect = 9e-056
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 161 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 340
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 341 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 439
Score = 188 bits (405), Expect = 5e-046
Identities = 80/90 (88%), Positives = 82/90 (91%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 438 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 259
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRPSNFLLFRQLI TWVLF TLI+ T+ GP
Sbjct: 258 TRPSNFLLFRQLISTWVLFFTLIIXTDSGP 169
Score = 168 bits (362), Expect = 5e-040
Identities = 70/105 (66%), Positives = 83/105 (79%)
Frame = +2 / +1
Query: 92 GGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER* 271
GG + ++GG G+Q+ +++ DER+E +PG+YQLPEQQEVAWS + S LQHGS*E *
Sbjct: 124 GGSHSGEEGGGGIQYGAAVRXDDEREEQHPGAYQLPEQQEVAWSCEGI*SPLQHGS*EC* 303
Query: 272 GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
GDVD GT+D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 304 GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 438
Score = 162 bits (349), Expect = 3e-038
Identities = 69/103 (66%), Positives = 80/103 (77%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 436 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 257
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFF 96
TKQLLVVPA+DK+LG++L AHH+ +R E L LL + F
Sbjct: 256 TTKQLLVVPAIDKHLGVVLHAHHQXGQRPRTEFLLLLLPLSGF 128
Score = 116 bits (248), Expect = 2e-024
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 437 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 258
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 257 HDQATSCCSGN**APGCCSSRSS 189
>gb|AU092630.1|AU092630 AU092630 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52661, mRNA sequence
Length = 671
Score = 221 bits (476), Expect = 9e-056
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 166 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 345
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 346 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 444
Score = 190 bits (409), Expect = 2e-046
Identities = 81/90 (90%), Positives = 83/90 (92%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 443 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 264
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRPSNFLLFRQLI TWVLF TLI+ST+ GP
Sbjct: 263 TRPSNFLLFRQLISTWVLFFTLIISTDSGP 174
Score = 174 bits (374), Expect = 1e-041
Identities = 77/127 (60%), Positives = 91/127 (71%)
Frame = +2 / +3
Query: 26 PSRRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQ 205
P A+ S L R A GG + ++GG G+Q+ +++ A DER+E +PG+YQLPEQ
Sbjct: 63 PDPEASPASRLAGRPPAFAADGGGSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQ 242
Query: 206 QEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHC 385
QEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP WGFGHHC
Sbjct: 243 QEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHC 422
Query: 386 PQEPEMS 406
QEPEMS
Sbjct: 423 AQEPEMS 443
Score = 169 bits (364), Expect = 2e-040
Identities = 72/108 (66%), Positives = 83/108 (76%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 441 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 262
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
TKQLLVVPA+DK+LG++L AHH+H +R E L LL + F RQ
Sbjct: 261 TTKQLLVVPAIDKHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFLRHRQ 118
Score = 116 bits (248), Expect = 2e-024
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 442 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 263
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 262 HDQATSCCSGN**APGCCSSRSS 194
>gb|AU161115.1|AU161115 AU161115 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53504, mRNA sequence
Length = 660
Score = 221 bits (476), Expect = 9e-056
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 154 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 333
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 334 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 432
Score = 190 bits (409), Expect = 2e-046
Identities = 81/90 (90%), Positives = 83/90 (92%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 431 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 252
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRPSNFLLFRQLI TWVLF TLI+ST+ GP
Sbjct: 251 TRPSNFLLFRQLISTWVLFFTLIISTDSGP 162
Score = 170 bits (365), Expect = 2e-040
Identities = 73/116 (62%), Positives = 86/116 (74%)
Frame = +2 / +3
Query: 59 PPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLR 238
P TA GG + ++GG G+Q+ +++ A DER+E +PG+YQLPEQQEVAWS +
Sbjct: 84 PAARTAFAADXGGSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQQEVAWSCEGI* 263
Query: 239 SALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
S LQHGS*E *GDVD G +D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 264 SPLQHGS*EC*GDVD*GXKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 431
Score = 166 bits (356), Expect = 3e-039
Identities = 71/108 (65%), Positives = 82/108 (75%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L L PHLPN+LKNHVA+ I+ H
Sbjct: 429 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWXLSPHLPNILKNHVAMAIKCPH 250
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
TKQLLVVPA+DK+LG++L AHH+H +R E L LL + F RQ
Sbjct: 249 TTKQLLVVPAIDKHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFLRHRQ 106
Score = 116 bits (248), Expect = 2e-024
Identities = 55/83 (66%), Positives = 59/83 (71%)
Frame = -1 / -3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 430 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLXPQSTSP*HSQEPCCNGDQMPS 251
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 250 HDQATSCCSGN**APGCCSSRSS 182
>gb|CV729204.1|CV729204 FLO--01-O20.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-O20,
mRNA sequence
Length = 500
Score = 221 bits (476), Expect = 9e-056
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 163 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 342
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 343 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 441
Score = 190 bits (409), Expect = 2e-046
Identities = 81/90 (90%), Positives = 83/90 (92%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 440 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 261
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRPSNFLLFRQLI TWVLF TLI+ST+ GP
Sbjct: 260 TRPSNFLLFRQLISTWVLFFTLIISTDSGP 171
Score = 174 bits (374), Expect = 1e-041
Identities = 77/127 (60%), Positives = 91/127 (71%)
Frame = +2 / +3
Query: 26 PSRRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQ 205
P A+ S L R A GG + ++GG G+Q+ +++ A DER+E +PG+YQLPEQ
Sbjct: 60 PDPEASPASRLAGRPPAFAADGGGSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQ 239
Query: 206 QEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHC 385
QEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP WGFGHHC
Sbjct: 240 QEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHC 419
Query: 386 PQEPEMS 406
QEPEMS
Sbjct: 420 AQEPEMS 440
Score = 169 bits (364), Expect = 2e-040
Identities = 72/108 (66%), Positives = 83/108 (76%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 438 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 259
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
TKQLLVVPA+DK+LG++L AHH+H +R E L LL + F RQ
Sbjct: 258 TTKQLLVVPAIDKHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFLRHRQ 115
Score = 116 bits (248), Expect = 2e-024
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 439 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 260
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 259 HDQATSCCSGN**APGCCSSRSS 191
>dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H02, full
insert sequence
Length = 694
Score = 221 bits (476), Expect = 9e-056
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 162 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 341
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 342 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 440
Score = 190 bits (409), Expect = 2e-046
Identities = 81/90 (90%), Positives = 83/90 (92%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 439 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 260
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
TRPSNFLLFRQLI TWVLF TLI+ST+ GP
Sbjct: 259 TRPSNFLLFRQLISTWVLFFTLIISTDSGP 170
Score = 174 bits (374), Expect = 1e-041
Identities = 77/127 (60%), Positives = 91/127 (71%)
Frame = +2 / +2
Query: 26 PSRRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQ 205
P A+ S L R A GG + ++GG G+Q+ +++ A DER+E +PG+YQLPEQ
Sbjct: 59 PDPEASPASRLAGRPPAFAADGGGSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQ 238
Query: 206 QEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHC 385
QEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP WGFGHHC
Sbjct: 239 QEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHC 418
Query: 386 PQEPEMS 406
QEPEMS
Sbjct: 419 AQEPEMS 439
Score = 169 bits (364), Expect = 2e-040
Identities = 72/108 (66%), Positives = 83/108 (76%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 437 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 258
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
TKQLLVVPA+DK+LG++L AHH+H +R E L LL + F RQ
Sbjct: 257 TTKQLLVVPAIDKHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFLRHRQ 114
Score = 116 bits (248), Expect = 2e-024
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 438 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 259
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 258 HDQATSCCSGN**APGCCSSRSS 190
>gb|CF314982.1|CF314982 HD--03-L17.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--03-L17, mRNA sequence
Length = 529
Score = 194 bits (418), Expect(2) = 1e-052
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +3 / +3
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 162 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 341
Query: 309 KKKALPVNKDRFISKMFLRG 368
KKKALPVNKDRFISKMFLRG
Sbjct: 342 KKKALPVNKDRFISKMFLRG 401
Score = 161 bits (346), Expect(2) = 2e-042
Identities = 69/77 (89%), Positives = 71/77 (92%)
Frame = -3 / -1
Query: 367 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLI 188
PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI
Sbjct: 400 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLI 221
Query: 187 RTWVLFLTLIMSTERGP 137
TWVLF TLI+ST+ GP
Sbjct: 220 STWVLFFTLIISTDSGP 170
Score = 143 bits (307), Expect(2) = 4e-036
Identities = 61/96 (63%), Positives = 72/96 (75%)
Frame = -2 / -3
Query: 368 PTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVD 189
PT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+D
Sbjct: 401 PT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAID 222
Query: 188 KNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
K+LG++L AHH+H +R E L LL + F RQ
Sbjct: 221 KHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFLRHRQ 114
Score = 143 bits (307), Expect(2) = 1e-036
Identities = 66/115 (57%), Positives = 80/115 (69%)
Frame = +2 / +2
Query: 26 PSRRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQ 205
P A+ S L R A GG + ++GG G+Q+ +++ A DER+E +PG+YQLPEQ
Sbjct: 59 PDPEASPASRLAGRPPAFAADGGGSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQ 238
Query: 206 QEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWG 370
QEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP WG
Sbjct: 239 QEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWG 403
Score = 36.3 bits (73), Expect(2) = 1e-052
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 368 GFGHHCPQEPEMS 406
GFGHHC QEPEMS
Sbjct: 402 GFGHHCAQEPEMS 440
Score = 35.4 bits (71), Expect(2) = 2e-042
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / -3
Query: 418 RVQATHFGFLRTMMTESP 365
+ THFGFL TMMTESP
Sbjct: 452 KTHITHFGFLSTMMTESP 399
Score = 34.1 bits (68), Expect(2) = 1e-036
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 366 GDSVIIVLRNPK*VACTRRESIC*QYVVLLGVR 464
GDSVIIVLRNPK*V + YV L V+
Sbjct: 400 GDSVIIVLRNPK*VIWVLYPGLSLCYVALSNVQ 498
Score = 32.2 bits (64), Expect(2) = 4e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 404 SFRVPEDNDDRIP 366
SFRVPE NDDRIP
Sbjct: 438 SFRVPEHNDDRIP 400
>gb|CF333220.1|CF333220 JMT--02-A13.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-A13, mRNA sequence
Length = 530
Score = 192 bits (413), Expect(2) = 5e-051
Identities = 79/80 (98%), Positives = 80/80 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRN+KKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 164 FSTGPLSVLMMSVKNNTQVLINCRNSKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 343
Query: 309 KKKALPVNKDRFISKMFLRG 368
KKKALPVNKDRFISKMFLRG
Sbjct: 344 KKKALPVNKDRFISKMFLRG 403
Score = 161 bits (346), Expect(2) = 3e-042
Identities = 69/77 (89%), Positives = 71/77 (92%)
Frame = -3 / -3
Query: 367 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLI 188
PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI
Sbjct: 402 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLI 223
Query: 187 RTWVLFLTLIMSTERGP 137
TWVLF TLI+ST+ GP
Sbjct: 222 STWVLFFTLIISTDSGP 172
Score = 138 bits (296), Expect(2) = 1e-033
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = -2 / -2
Query: 368 PTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVD 189
PT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H TKQLL VPA+D
Sbjct: 403 PT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPHTTKQLLAVPAID 224
Query: 188 KNLGIILDAHHEHRERTGAELLFLL 114
K+LG++L AHH+H +R E L LL
Sbjct: 223 KHLGVVLHAHHQHGQRPRTEFLLLL 149
Score = 134 bits (287), Expect(2) = 2e-033
Identities = 58/92 (63%), Positives = 71/92 (77%)
Frame = +2 / +1
Query: 92 GGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER* 271
G + ++GG G+Q+ +++ A DER+E +PG+YQLPEQQEVAWS + S LQHGS*E *
Sbjct: 127 GSHSAGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQQEVAWSCEGI*SPLQHGS*EC* 306
Query: 272 GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPW 367
GDVD GT+D *RQEEGS EQGQVH QDVP W
Sbjct: 307 GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTW 402
Score = 35.0 bits (70), Expect(2) = 3e-042
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / -2
Query: 406 THFGFLRTMMTESP 365
THFGFL TMMTESP
Sbjct: 442 THFGFLSTMMTESP 401
Score = 33.6 bits (67), Expect(2) = 5e-051
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 371 FGHHCPQEPEMS 406
FGHHC QEPEMS
Sbjct: 407 FGHHCAQEPEMS 442
Score = 32.2 bits (64), Expect(2) = 2e-033
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3 / +3
Query: 366 GDSVIIVLRNPK*V 407
GDSVIIVLRNPK*V
Sbjct: 402 GDSVIIVLRNPK*V 443
Score = 29.0 bits (57), Expect(2) = 1e-033
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 404 SFRVPEDNDDRI 369
SFRVPE NDDRI
Sbjct: 440 SFRVPEHNDDRI 405
>gb|CV729205.1|CV729205 FLO--01-O20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-O20,
mRNA sequence
Length = 488
Score = 204 bits (440), Expect = 8e-051
Identities = 86/86 (100%), Positives = 86/86 (100%)
Frame = +3 / -3
Query: 150 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPV 329
VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPV
Sbjct: 486 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPV 307
Query: 330 NKDRFISKMFLRGDSVIIVLRNPK*V 407
NKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 306 NKDRFISKMFLRGDSVIIVLRNPK*V 229
Score = 183 bits (395), Expect = 1e-044
Identities = 79/86 (91%), Positives = 80/86 (93%)
Frame = -3 / +2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 230 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 409
Query: 226 TRPSNFLLFRQLIRTWVLFLTLIMST 149
TRPSNFLLFRQLI TWVLF TLI+ST
Sbjct: 410 TRPSNFLLFRQLISTWVLFFTLIIST 487
Score = 157 bits (338), Expect = 1e-036
Identities = 64/85 (75%), Positives = 73/85 (85%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 232 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 411
Query: 224 ATKQLLVVPAVDKNLGIILDAHHEH 150
TKQLLVVPA+DK+LG++L AHH+H
Sbjct: 412 TTKQLLVVPAIDKHLGVVLHAHHQH 486
Score = 153 bits (329), Expect = 2e-035
Identities = 65/85 (76%), Positives = 70/85 (82%)
Frame = +2 / -2
Query: 152 AHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGE 331
A DER+E +PG+YQLPEQQEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS E
Sbjct: 484 ADDEREEQHPGAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSE 305
Query: 332 QGQVHKQDVPPWGFGHHCPQEPEMS 406
QGQVH QDVP WGFGHHC QEPEMS
Sbjct: 304 QGQVH*QDVPTWGFGHHCAQEPEMS 230
Score = 116 bits (248), Expect = 2e-024
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = -1 / +3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 231 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 410
Query: 225 RDQATSCCSGS**EPGYYS*RSS 157
DQATSCCSG+** PG S RSS
Sbjct: 411 HDQATSCCSGN**APGCCSSRSS 479
>gb|CF333221.1|CF333221 JMT--02-A13.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-A13, mRNA sequence
Length = 536
Score = 179 bits (385), Expect(2) = 1e-049
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +3 / -1
Query: 168 KNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFI 347
+ QVLINCRN+KKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALP+NKDRFI
Sbjct: 473 RTTPQVLINCRNSKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPLNKDRFI 294
Query: 348 SKMFLRGDSVIIVLRNPK*V 407
SKMFLRGDSVIIVLRNPK*V
Sbjct: 293 SKMFLRGDSVIIVLRNPK*V 234
Score = 165 bits (354), Expect(2) = 8e-041
Identities = 71/80 (88%), Positives = 72/80 (90%)
Frame = -3 / +1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLF GRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 235 THFGFLSTMMTESPRRNILLMNLSLFNGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 414
Query: 226 TRPSNFLLFRQLIRTWVLFL 167
TRPSNFLLFRQLI TW + L
Sbjct: 415 TRPSNFLLFRQLISTWGVVL 474
Score = 140 bits (301), Expect(2) = 2e-034
Identities = 60/76 (78%), Positives = 63/76 (82%)
Frame = +2 / -3
Query: 179 PGSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDV 358
PG+YQLPEQQEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDV
Sbjct: 462 PGAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSIEQGQVH*QDV 283
Query: 359 PPWGFGHHCPQEPEMS 406
P WGFGHHC QEPEMS
Sbjct: 282 PTWGFGHHCAQEPEMS 235
Score = 134 bits (287), Expect = 1e-029
Identities = 57/76 (75%), Positives = 63/76 (82%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLV +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 237 SFRVPEHNDDRIPT*EHLANEPVLVQWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 416
Query: 224 ATKQLLVVPAVDKNLG 177
TKQLL VPA+DK+LG
Sbjct: 417 TTKQLLAVPAIDKHLG 464
Score = 112 bits (240), Expect = 3e-023
Identities = 50/76 (65%), Positives = 54/76 (71%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 236 LISGS*AQ**PNPHVGTSC**TCPCSMEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 415
Query: 225 RDQATSCCSGS**EPG 178
DQATSCCSG+** PG
Sbjct: 416 HDQATSCCSGN**APG 463
Score = 41.4 bits (84), Expect(2) = 1e-049
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / -3
Query: 129 FSTGPLSVLMMSVKNNT 179
FSTGPLSVLMMSVKNNT
Sbjct: 513 FSTGPLSVLMMSVKNNT 463
Score = 29.5 bits (58), Expect(2) = 2e-034
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 110 KKGGRGVQHRSSLGAHDERQE*YP 181
++GG G+Q+ +++ A DER+E +P
Sbjct: 532 EEGGGGIQYGAAVRADDEREEQHP 461
Score = 26.3 bits (51), Expect(2) = 8e-041
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 178 VLFLTLIMSTERGP 137
VLF TLI+ST+ GP
Sbjct: 464 VLFFTLIISTDSGP 505
>gb|CF314983.1|CF314983 HD--03-L17.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--03-L17, mRNA sequence
Length = 550
Score = 178 bits (383), Expect(2) = 3e-049
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +3 / -3
Query: 186 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 365
LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR
Sbjct: 449 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 270
Query: 366 GDSVIIVLRNPK*V 407
GDSVIIVLRNPK*V
Sbjct: 269 GDSVIIVLRNPK*V 228
Score = 160 bits (343), Expect(2) = 8e-041
Identities = 69/73 (94%), Positives = 69/73 (94%)
Frame = -3 / +1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 229 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 408
Query: 226 TRPSNFLLFRQLI 188
TRPSNFLLFRQLI
Sbjct: 409 TRPSNFLLFRQLI 447
Score = 136 bits (292), Expect(2) = 1e-034
Identities = 58/74 (78%), Positives = 61/74 (82%)
Frame = +2 / -2
Query: 185 SYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPP 364
+YQLPEQQEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP
Sbjct: 450 AYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPT 271
Query: 365 WGFGHHCPQEPEMS 406
WGFGHHC QEPEMS
Sbjct: 270 WGFGHHCAQEPEMS 229
Score = 136 bits (291), Expect = 3e-030
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 231 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 410
Query: 224 ATKQLLVVPAVDKNLG 177
TKQLLVVPA+DK G
Sbjct: 411 TTKQLLVVPAIDKPXG 458
Score = 106 bits (227), Expect = 2e-021
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 230 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 409
Query: 225 RDQATSCCSGS** 187
DQATSCCSG+**
Sbjct: 410 HDQATSCCSGN** 448
Score = 41.4 bits (84), Expect(2) = 3e-049
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / -2
Query: 129 FSTGPLSVLMMSVKNNT 179
FSTGPLSVLMMSVKNNT
Sbjct: 507 FSTGPLSVLMMSVKNNT 457
Score = 34.1 bits (68), Expect(2) = 1e-034
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2 / -1
Query: 92 GGRNQHKKGGRGVQHRSSLGAHDERQE*YP 181
GG + ++GG G+Q+ +++ A DER+E +P
Sbjct: 544 GGSHSGEEGGGGIQYGAAVRADDEREEQHP 455
Score = 31.3 bits (62), Expect(2) = 8e-041
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3 / +2
Query: 181 WVLFLTLIMSTERGP 137
WVLF TLI+ST+ GP
Sbjct: 455 WVLFFTLIISTDSGP 499
>gb|C27943.1|C27943 C27943 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C53504_1A, mRNA sequence
Length = 458
Score = 194 bits (418), Expect(2) = 2e-048
Identities = 80/80 (100%), Positives = 80/80 (100%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 149 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 328
Query: 309 KKKALPVNKDRFISKMFLRG 368
KKKALPVNKDRFISKMFLRG
Sbjct: 329 KKKALPVNKDRFISKMFLRG 388
Score = 161 bits (346), Expect = 8e-038
Identities = 69/77 (89%), Positives = 71/77 (92%)
Frame = -3 / -3
Query: 367 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLI 188
PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI
Sbjct: 387 PRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLI 208
Query: 187 RTWVLFLTLIMSTERGP 137
TWVLF TLI+ST+ GP
Sbjct: 207 STWVLFFTLIISTDSGP 157
Score = 143 bits (306), Expect = 2e-032
Identities = 61/96 (63%), Positives = 72/96 (75%)
Frame = -2 / -2
Query: 368 PTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVD 189
PT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+D
Sbjct: 388 PT*EHLANEPVLVHWKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAID 209
Query: 188 KNLGIILDAHHEHRERTGAELLFLLFYVGFFRHGRQ 81
K+LG++L AHH+H +R E L LL + F RQ
Sbjct: 208 KHLGVVLHAHHQHGQRPRTEFLLLLLPLSGFXPHRQ 101
Score = 136 bits (292), Expect = 2e-030
Identities = 64/115 (55%), Positives = 78/115 (67%)
Frame = +2 / +1
Query: 26 PSRRAAAVSPLPPRLTAPIGAHGGRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQ 205
P A+ S L R A + ++GG G+Q+ +++ A DER+E +PG+YQLPEQ
Sbjct: 46 PDPEASPASRLAGRPPAFAADGEXSHSGEEGGGGIQYGAAVRADDEREEQHPGAYQLPEQ 225
Query: 206 QEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWG 370
QEVAWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP WG
Sbjct: 226 QEVAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSSEQGQVH*QDVPTWG 390
Score = 22.6 bits (43), Expect(2) = 2e-048
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / +2
Query: 368 GFGHHC 385
GFGHHC
Sbjct: 389 GFGHHC 406
>gb|AACV01011724.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011724, whole
genome shotgun sequence
Length = 16500
Score = 95.5 bits (202), Expect(3) = 1e-035
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 14234 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 14353
Score = 94.1 bits (199), Expect(3) = 6e-044
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3 / -1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 14355 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 14233
Score = 92.3 bits (195), Expect(3) = 6e-044
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3 / -2
Query: 162 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
S+ ++ VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 14564 SIYSSF*VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 14436
Score = 84.9 bits (179), Expect(3) = 2e-028
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2 / -3
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
GT+D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 14353 GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 14234
Score = 82.2 bits (173), Expect(2) = 6e-023
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -2 / +1
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKN 255
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL P +LKN
Sbjct: 14236 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLQQEKPMLLKN 14385
Score = 71.6 bits (150), Expect(3) = 1e-035
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +1
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI T
Sbjct: 14437 TSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLIST 14544
Score = 70.3 bits (147), Expect(3) = 1e-026
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2 / +3
Query: 290 YLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+DK+L
Sbjct: 14436 YLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAIDKHL 14546
Score = 69.3 bits (145), Expect(3) = 1e-026
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / +3
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY
Sbjct: 14235 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLY 14339
Score = 62.5 bits (130), Expect(3) = 2e-028
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / -1
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEVAWS + S LQHGS*E *GDVD GT
Sbjct: 14544 GAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GT 14434
Score = 49.2 bits (101), Expect(2) = 6e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1 / +2
Query: 261 QEPCCSADRRLARDQATSCCSGS**EP 181
QEPCC+ D+ + DQATSCCSG+** P
Sbjct: 14465 QEPCCNGDQMPSHDQATSCCSGN**AP 14545
Score = 45.5 bits (93), Expect(3) = 6e-044
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNTQV 185
FSTGPLSVLMMSVKNNTQV
Sbjct: 16209 FSTGPLSVLMMSVKNNTQV 16153
Score = 36.8 bits (74), Expect(3) = 1e-035
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 185 NLGIILDAHHEHRERTGAELLFLL 114
NLG++L AHH+H +R E L LL
Sbjct: 16153 NLGVVLHAHHQHGQRPRTEFLLLL 16224
Score = 33.6 bits (67), Expect(3) = 1e-026
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 184 TWVLFLTLIMSTERGP 137
TWVLF TLI+ST+ GP
Sbjct: 16154 TWVLFFTLIISTDSGP 16201
Score = 32.2 bits (64), Expect(3) = 2e-028
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2 / -3
Query: 110 KKGGRGVQHRSSLGAHDERQE*YPG 184
++GG G+Q+ +++ A DER+E +PG
Sbjct: 16228 EEGGGGIQYGAAVRADDEREEQHPG 16154
>gb|AU058316.2|AU058316 AU058316 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50441_2Z, mRNA
sequence
Length = 453
Score = 177 bits (381), Expect = 1e-042
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = +3 / +2
Query: 183 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFL 362
VLINCRNNK LLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFL
Sbjct: 2 VLINCRNNKXLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFL 181
Query: 363 RGDSVIIVLRNPK*V 407
RGDSVIIVLRNPK*V
Sbjct: 182 RGDSVIIVLRNPK*V 226
Score = 158 bits (340), Expect = 5e-037
Identities = 69/75 (92%), Positives = 69/75 (92%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKAR 227
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQ RS A
Sbjct: 225 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQWRSNAL 46
Query: 226 TRPSNFLLFRQLIRT 182
TRPS FLLFRQLI T
Sbjct: 45 TRPSXFLLFRQLIST 1
Score = 136 bits (292), Expect = 2e-030
Identities = 58/75 (77%), Positives = 61/75 (81%)
Frame = +2 / +1
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGTEDR*RQEEGSPGEQGQVHKQDVP 361
G+YQLPEQQE AWS + S LQHGS*E *GDVD GT+D *RQEEGS EQGQVH QDVP
Sbjct: 1 GAYQLPEQQEXAWSCEGI*SPLQHGS*EC*GDVD*GTKDW*RQEEGSSXEQGQVH*QDVP 180
Query: 362 PWGFGHHCPQEPEMS 406
WGFGHHC QEPEMS
Sbjct: 181 TWGFGHHCAQEPEMS 225
Score = 133 bits (286), Expect = 1e-029
Identities = 56/74 (75%), Positives = 62/74 (83%)
Frame = -2 / -3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSH 225
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL PHLPN+LKNHVA+ I+ H
Sbjct: 223 SFRVPEHNDDRIPT*EHLANEPVLVHXKSLLLAFTSLWYLSPHLPNILKNHVAMAIKCPH 44
Query: 224 ATKQLLVVPAVDKN 183
TKQ LVVPA+DK+
Sbjct: 43 TTKQXLVVPAIDKH 2
Score = 105 bits (223), Expect = 7e-021
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -1 / -2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLYXXXXXXXXXXXXSQEPCCSADRRLA 226
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY SQEPCC+ D+ +
Sbjct: 224 LISGS*AQ**PNPHVGTSC**TCPCSXEEPSSCLYQSLVPQSTSP*HSQEPCCNGDQMPS 45
Query: 225 RDQATSCCSGS** 187
DQA SCCSG+**
Sbjct: 44 HDQAXSCCSGN** 6
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01,
complete sequence
Length = 117724
Score = 95.5 bits (202), Expect(3) = 5e-034
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 45270 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 45389
Score = 94.1 bits (199), Expect(3) = 3e-042
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3 / -1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 45391 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 45269
Score = 92.3 bits (195), Expect(3) = 3e-042
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3 / -2
Query: 162 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
S+ ++ VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 45600 SIYSSF*VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 45472
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2 / -3
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
GT+D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 45389 GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 45270
Score = 82.2 bits (173), Expect(2) = 6e-023
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -2 / +2
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKN 255
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL P +LKN
Sbjct: 45272 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLQQEKPMLLKN 45421
Score = 71.6 bits (150), Expect(3) = 5e-034
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +2
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI T
Sbjct: 45473 TSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLIST 45580
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2 / +1
Query: 290 YLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+DK+L
Sbjct: 45472 YLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAIDKHL 45582
Score = 69.3 bits (145), Expect(2) = 2e-025
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / +1
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY
Sbjct: 45271 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLY 45375
Score = 62.5 bits (130), Expect(2) = 1e-027
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / -1
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEVAWS + S LQHGS*E *GDVD GT
Sbjct: 45580 GAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GT 45470
Score = 49.2 bits (101), Expect(2) = 6e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1 / +3
Query: 261 QEPCCSADRRLARDQATSCCSGS**EP 181
QEPCC+ D+ + DQATSCCSG+** P
Sbjct: 45501 QEPCCNGDQMPSHDQATSCCSGN**AP 45581
Score = 45.5 bits (93), Expect(3) = 3e-042
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNTQV 185
FSTGPLSVLMMSVKNNTQV
Sbjct: 47245 FSTGPLSVLMMSVKNNTQV 47189
Score = 36.8 bits (74), Expect(3) = 5e-034
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 185 NLGIILDAHHEHRERTGAELLFLL 114
NLG++L AHH+H +R E L LL
Sbjct: 47189 NLGVVLHAHHQHGQRPRTEFLLLL 47260
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 95.5 bits (202), Expect(2) = 1e-033
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 1849639 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 1849758
Score = 94.1 bits (199), Expect(3) = 1e-039
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3 / -3
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 1849760 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 1849638
Score = 92.3 bits (195), Expect(3) = 1e-039
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3 / -1
Query: 162 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
S+ ++ VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 1849969 SIYSSF*VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 1849841
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2 / -2
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
GT+D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 1849758 GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 1849639
Score = 82.2 bits (173), Expect(2) = 6e-023
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKN 255
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL P +LKN
Sbjct: 1849641 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLQQEKPMLLKN 1849790
Score = 71.6 bits (150), Expect(2) = 1e-033
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +3
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI T
Sbjct: 1849842 TSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLIST 1849949
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2 / +2
Query: 290 YLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+DK+L
Sbjct: 1849841 YLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAIDKHL 1849951
Score = 69.3 bits (145), Expect(2) = 2e-025
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY
Sbjct: 1849640 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLY 1849744
Score = 62.5 bits (130), Expect(2) = 1e-027
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / -3
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEVAWS + S LQHGS*E *GDVD GT
Sbjct: 1849949 GAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GT 1849839
Score = 49.2 bits (101), Expect(2) = 6e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1 / +1
Query: 261 QEPCCSADRRLARDQATSCCSGS**EP 181
QEPCC+ D+ + DQATSCCSG+** P
Sbjct: 1849870 QEPCCNGDQMPSHDQATSCCSGN**AP 1849950
Score = 45.5 bits (93), Expect(3) = 1e-039
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3 / -3
Query: 129 FSTGPLSVLMMSVKNNTQV 185
FSTGPLSVLMMSVKNNTQV
Sbjct: 1851614 FSTGPLSVLMMSVKNNTQV 1851558
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041 genomic
scaffold, whole genome shotgun sequence
Length = 2540762
Score = 95.5 bits (202), Expect(2) = 1e-033
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 1820572 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 1820691
Score = 94.1 bits (199), Expect(3) = 1e-039
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3 / -1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 1820693 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 1820571
Score = 92.3 bits (195), Expect(3) = 1e-039
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3 / -2
Query: 162 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
S+ ++ VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 1820902 SIYSSF*VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 1820774
Score = 84.9 bits (179), Expect(2) = 1e-027
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +2 / -3
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
GT+D *RQEEGS EQGQVH QDVP WGFGHHC QEPEMS
Sbjct: 1820691 GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEMS 1820572
Score = 82.2 bits (173), Expect(2) = 6e-023
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -2 / +3
Query: 404 SFRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKN 255
SFRVPE NDDRIPT EHLA EPVLVH +SLLLAFT L YL P +LKN
Sbjct: 1820574 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLQQEKPMLLKN 1820723
Score = 71.6 bits (150), Expect(2) = 1e-033
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / +3
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ RS A TRPSNFLLFRQLI T
Sbjct: 1820775 TSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLIST 1820882
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2 / +2
Query: 290 YLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
YL PHLPN+LKNHVA+ I+ H TKQLLVVPA+DK+L
Sbjct: 1820774 YLSPHLPNILKNHVAMAIKCPHTTKQLLVVPAIDKHL 1820884
Score = 69.3 bits (145), Expect(2) = 2e-025
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = -1 / +2
Query: 405 LISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
LISGS* Q**PNPH GTSC *TCPCS EPSSCLY
Sbjct: 1820573 LISGS*AQ**PNPHVGTSC**TCPCSLEEPSSCLY 1820677
Score = 62.5 bits (130), Expect(2) = 1e-027
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / -1
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEVAWS + S LQHGS*E *GDVD GT
Sbjct: 1820882 GAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GT 1820772
Score = 49.2 bits (101), Expect(2) = 6e-023
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1 / +1
Query: 261 QEPCCSADRRLARDQATSCCSGS**EP 181
QEPCC+ D+ + DQATSCCSG+** P
Sbjct: 1820803 QEPCCNGDQMPSHDQATSCCSGN**AP 1820883
Score = 45.5 bits (93), Expect(3) = 1e-039
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3 / -1
Query: 129 FSTGPLSVLMMSVKNNTQV 185
FSTGPLSVLMMSVKNNTQV
Sbjct: 1822547 FSTGPLSVLMMSVKNNTQV 1822491
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 95.5 bits (202), Expect(2) = 1e-031
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +2
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 2340176 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 2340295
Score = 92.7 bits (196), Expect(2) = 2e-037
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3 / -3
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL+NPK*V
Sbjct: 2340297 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLKNPK*V 2340175
Score = 87.2 bits (184), Expect(2) = 2e-025
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2 / -2
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT 418
GT+D *RQEEGS EQGQVH+QDVP WG GHHC Q+PEMS LY+
Sbjct: 2340295 GTKDW*RQEEGSSSEQGQVHQQDVPTWGLGHHCAQKPEMSYLYS 2340164
Score = 87.2 bits (184), Expect(2) = 2e-037
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3 / -1
Query: 183 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
VLINC+NNKKLLGRVRAFD HCNMVLENVREMWTEV
Sbjct: 2340491 VLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEV 2340384
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -1 / +3
Query: 417 VYRLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
+YR LISG * Q**P+PH GTSC *TCPCS EPSSCLY
Sbjct: 2340165 LYR*LISGF*AQ**PSPHVGTSC**TCPCSLEEPSSCLY 2340281
Score = 64.8 bits (135), Expect(2) = 1e-031
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ S A TRPSNFLLF QLI T
Sbjct: 2340385 TSVHISLTFSRTMLQWLSNALTRPSNFLLFWQLIST 2340492
Score = 60.2 bits (125), Expect(2) = 4e-022
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2 / +3
Query: 323 ESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
+S L T YLGPHLP++LKNHVA+ I+ H T LLVV A+DK+L
Sbjct: 2340351 KSSKLQITPCMYLGPHLPDILKNHVAMAIKCPHTT**LLVVLAIDKHL 2340494
Score = 52.4 bits (108), Expect(2) = 2e-025
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +2 / -3
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEV S + LQHGS*E GDVDRGT
Sbjct: 2340492 GAYQLPEQQEVTRSCEGI**PLQHGS*ECQGDVDRGT 2340382
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0458E05
Length = 193577
Score = 95.5 bits (202), Expect(2) = 2e-031
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 152095 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 152214
Score = 92.7 bits (196), Expect(2) = 2e-037
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3 / -1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL+NPK*V
Sbjct: 152216 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLKNPK*V 152094
Score = 87.2 bits (184), Expect(2) = 2e-025
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2 / -3
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT 418
GT+D *RQEEGS EQGQVH+QDVP WG GHHC Q+PEMS LY+
Sbjct: 152214 GTKDW*RQEEGSSSEQGQVHQQDVPTWGLGHHCAQKPEMSYLYS 152083
Score = 87.2 bits (184), Expect(2) = 2e-037
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3 / -2
Query: 183 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
VLINC+NNKKLLGRVRAFD HCNMVLENVREMWTEV
Sbjct: 152410 VLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEV 152303
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -1 / +2
Query: 417 VYRLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
+YR LISG * Q**P+PH GTSC *TCPCS EPSSCLY
Sbjct: 152084 LYR*LISGF*AQ**PSPHVGTSC**TCPCSLEEPSSCLY 152200
Score = 64.8 bits (135), Expect(2) = 2e-031
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = -3 / +3
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ S A TRPSNFLLF QLI T
Sbjct: 152304 TSVHISLTFSRTMLQWLSNALTRPSNFLLFWQLIST 152411
Score = 60.2 bits (125), Expect(2) = 4e-022
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2 / +2
Query: 323 ESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
+S L T YLGPHLP++LKNHVA+ I+ H T LLVV A+DK+L
Sbjct: 152270 KSSKLQITPCMYLGPHLPDILKNHVAMAIKCPHTT**LLVVLAIDKHL 152413
Score = 52.4 bits (108), Expect(2) = 2e-025
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +2 / -1
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEV S + LQHGS*E GDVDRGT
Sbjct: 152411 GAYQLPEQQEVTRSCEGI**PLQHGS*ECQGDVDRGT 152301
>gb|AACV01003094.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003094, whole
genome shotgun sequence
Length = 61898
Score = 95.5 bits (202), Expect(2) = 2e-031
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = -3 / +3
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 45744 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 45863
Score = 92.7 bits (196), Expect(2) = 2e-037
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3 / -2
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
+VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL+NPK*V
Sbjct: 45865 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLKNPK*V 45743
Score = 87.2 bits (184), Expect(2) = 2e-025
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +2 / -1
Query: 287 GTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMSSLYT 418
GT+D *RQEEGS EQGQVH+QDVP WG GHHC Q+PEMS LY+
Sbjct: 45863 GTKDW*RQEEGSSSEQGQVHQQDVPTWGLGHHCAQKPEMSYLYS 45732
Score = 87.2 bits (184), Expect(2) = 2e-037
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3 / -3
Query: 183 VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
VLINC+NNKKLLGRVRAFD HCNMVLENVREMWTEV
Sbjct: 46059 VLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEV 45952
Score = 68.4 bits (143), Expect(2) = 4e-022
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -1 / +1
Query: 417 VYRLLISGS*GQ**PNPHGGTSCL*TCPCSPGEPSSCLY 301
+YR LISG * Q**P+PH GTSC *TCPCS EPSSCLY
Sbjct: 45733 LYR*LISGF*AQ**PSPHVGTSC**TCPCSLEEPSSCLY 45849
Score = 64.8 bits (135), Expect(2) = 2e-031
Identities = 30/36 (83%), Positives = 30/36 (83%)
Frame = -3 / +2
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
TSVHISLTFSRTMLQ S A TRPSNFLLF QLI T
Sbjct: 45953 TSVHISLTFSRTMLQWLSNALTRPSNFLLFWQLIST 46060
Score = 60.2 bits (125), Expect(2) = 4e-022
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = -2 / +1
Query: 323 ESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHATKQLLVVPAVDKNL 180
+S L T YLGPHLP++LKNHVA+ I+ H T LLVV A+DK+L
Sbjct: 45919 KSSKLQITPCMYLGPHLPDILKNHVAMAIKCPHTT**LLVVLAIDKHL 46062
Score = 52.4 bits (108), Expect(2) = 2e-025
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +2 / -2
Query: 182 GSYQLPEQQEVAWSRASLRSALQHGS*ER*GDVDRGT 292
G+YQLPEQQEV S + LQHGS*E GDVDRGT
Sbjct: 46060 GAYQLPEQQEVTRSCEGI**PLQHGS*ECQGDVDRGT 45950
>gb|CA756409.1|CA756409 BR030041000_PLATE_G11_87_087.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030041000_PLATE_G11_87_087.ab1 similar to small
nuclear ribonucleoprotein D2-like protein [Chlamys, mRNA
sequence
Length = 627
Score = 112 bits (239), Expect(2) = 2e-034
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +3 / +2
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F TGPLS+L +VKNNTQVLI CRNN+KLL RV+AFDRHCNMVLE+V E+W E PK+ K
Sbjct: 119 FRTGPLSLLTDAVKNNTQVLIACRNNRKLLARVKAFDRHCNMVLEDVTELWQETPKSSKA 298
Query: 309 KKKA 320
K A
Sbjct: 299 KAAA 310
Score = 57.4 bits (119), Expect(2) = 2e-034
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +3 / +2
Query: 318 ALPVNKDRFISKMFLRGDSVIIVLRNPK 401
A PVNKDR+IS MFLRGDSVI+VL+NPK
Sbjct: 350 AKPVNKDRYISXMFLRGDSVILVLKNPK 433
>ref|NM_189410.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 153
Score = 119 bits (254), Expect = 4e-025
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3 / +1
Query: 252 MVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
MVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL+NPK*
Sbjct: 1 MVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLKNPK* 153
Score = 117 bits (250), Expect = 1e-024
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRT 254
HFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRT
Sbjct: 152 HFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRT 3
>dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B09, full
insert sequence
Length = 360
Score = 116 bits (248), Expect = 2e-024
Identities = 49/49 (100%), Positives = 49/49 (100%)
Frame = +3 / +2
Query: 261 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 407
ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V
Sbjct: 2 ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*V 148
Score = 115 bits (245), Expect = 6e-024
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -3 / -1
Query: 406 THFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFS 260
THFGFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFS
Sbjct: 147 THFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFS 1
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,315,440,073
Number of Sequences: 438736
Number of extensions: 64881058
Number of successful extensions: 416796
Number of sequences better than 1.0e-020: 31
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 149752000365
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)