TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950080.2.1
(687 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK102184.1| Oryza sativa (japonica cultivar-group) cDNA... 359 2e-097
ref|XM_477670.1| Oryza sativa (japonica cultivar-group), mRNA 359 2e-097
gb|AACV01015874.1| Oryza sativa (japonica cultivar-group) c... 138 1e-085
dbj|AP003889.2| Oryza sativa (japonica cultivar-group) chro... 138 1e-083
dbj|AP005325.5| Oryza sativa (japonica cultivar-group) geno... 138 4e-083
gb|CH401223.1| Oryza sativa (japonica cultivar-group) chrom... 138 2e-081
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 138 2e-079
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 138 6e-079
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 138 7e-079
gb|CX728620.1|CX728620 OSJNEf09O05.r OSJNEf Oryza sativa (j... 220 1e-055
>dbj|AK102184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M16, full
insert sequence
Length = 895
Score = 359 bits (778), Expect = 2e-097
Identities = 141/170 (82%), Positives = 151/170 (88%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 39 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 218
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
LVCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NN
Sbjct: 219 LVCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNN 398
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS 541
IECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRPS
Sbjct: 399 IECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRPS 548
Score = 228 bits (492), Expect(2) = 2e-080
Identities = 91/118 (77%), Positives = 107/118 (90%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TSA
Sbjct: 542 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSA 363
Query: 355 RQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+QVLVDD+ALE+
Sbjct: 362 SQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIANQVLVDDVALEL 189
Score = 176 bits (378), Expect = 3e-042
Identities = 84/118 (71%), Positives = 93/118 (78%)
Frame = +1 / +2
Query: 199 HQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQ 378
HQRGPG+R A*G DGRRWYTSRLP M*FLSRTLV*P SCAP+ LNSA*S D QRL+G Q
Sbjct: 206 HQRGPGLR*A*GRDGRRWYTSRLPWM*FLSRTLV*PCSCAPNR*LNSA*SLD*QRLYGCQ 385
Query: 379 ARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET*LDLS 552
A +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET +LS
Sbjct: 386 AHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLETIPELS 559
Score = 149 bits (321), Expect = 2e-034
Identities = 66/104 (63%), Positives = 71/104 (68%)
Frame = -2 / -2
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMAXXXXXXXXXXXXRGALGRFRTLCCWRAWNPCNLC 357
VS+CL LS+ SY*YPP CHFA A GA G+F LCC AW+P NLC
Sbjct: 543 VSSCLSILSVCPHSY*YPPHCHFARASLSPLCSSPLPPPGASGKFHILCCL*AWHPYNLC 364
Query: 356 PSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 363 *SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 232
Score = 126 bits (270), Expect = 2e-027
Identities = 57/79 (72%), Positives = 61/79 (77%)
Frame = -1 / -1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL V+RSCR
Sbjct: 523 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PLLVKRSCR 344
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSVWSTTTRSNQRSGKK
Sbjct: 343 IELSVWSTTTRSNQRSGKK 287
Score = 116 bits (248), Expect(2) = 2e-032
Identities = 56/92 (60%), Positives = 58/92 (63%)
Frame = +3 / +1
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTWCATSLRT*WKKVVY**ITTDV 278
S PT +SSA SSTRTW A SLRT*WKKVVY**IT DV
Sbjct: 106 SSPTRWTSATSTSGTSSARRASMTAGTRSSSATSSTRTWFAMSLRT*WKKVVY**ITMDV 285
Query: 279 ISFQNVGLTS*LCSRLTTQFCMIA*RAEVTWV 374
ISFQNVGLT *LCS+ TQFCMIA* AEV WV
Sbjct: 286 ISFQNVGLTL*LCSKQITQFCMIA*LAEVIWV 381
Score = 95.9 bits (203), Expect(2) = 2e-080
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 211 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 32
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 31 PPRDAIAR 8
Score = 46.9 bits (96), Expect(2) = 2e-032
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGD 536
T+R *C CEVT WRI VG H*Q G*T GD
Sbjct: 448 TKRR**CPCEVTMWRISVGMWAH*QNG*TTGD 543
>ref|XM_477670.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 895
Score = 359 bits (778), Expect = 2e-097
Identities = 141/170 (82%), Positives = 151/170 (88%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 39 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 218
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
LVCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NN
Sbjct: 219 LVCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNN 398
Query: 392 IECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS 541
IECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRPS
Sbjct: 399 IECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRPS 548
Score = 228 bits (492), Expect(2) = 2e-080
Identities = 91/118 (77%), Positives = 107/118 (90%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TSA
Sbjct: 542 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSA 363
Query: 355 RQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+QVLVDD+ALE+
Sbjct: 362 SQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIANQVLVDDVALEL 189
Score = 176 bits (378), Expect = 3e-042
Identities = 84/118 (71%), Positives = 93/118 (78%)
Frame = +1 / +2
Query: 199 HQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQ 378
HQRGPG+R A*G DGRRWYTSRLP M*FLSRTLV*P SCAP+ LNSA*S D QRL+G Q
Sbjct: 206 HQRGPGLR*A*GRDGRRWYTSRLPWM*FLSRTLV*PCSCAPNR*LNSA*SLD*QRLYGCQ 385
Query: 379 ARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET*LDLS 552
A +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET +LS
Sbjct: 386 AHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLETIPELS 559
Score = 149 bits (321), Expect = 2e-034
Identities = 66/104 (63%), Positives = 71/104 (68%)
Frame = -2 / -2
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMAXXXXXXXXXXXXRGALGRFRTLCCWRAWNPCNLC 357
VS+CL LS+ SY*YPP CHFA A GA G+F LCC AW+P NLC
Sbjct: 543 VSSCLSILSVCPHSY*YPPHCHFARASLSPLCSSPLPPPGASGKFHILCCL*AWHPYNLC 364
Query: 356 PSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 363 *SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 232
Score = 126 bits (270), Expect = 2e-027
Identities = 57/79 (72%), Positives = 61/79 (77%)
Frame = -1 / -1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL V+RSCR
Sbjct: 523 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PLLVKRSCR 344
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSVWSTTTRSNQRSGKK
Sbjct: 343 IELSVWSTTTRSNQRSGKK 287
Score = 116 bits (248), Expect(2) = 2e-032
Identities = 56/92 (60%), Positives = 58/92 (63%)
Frame = +3 / +1
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTWCATSLRT*WKKVVY**ITTDV 278
S PT +SSA SSTRTW A SLRT*WKKVVY**IT DV
Sbjct: 106 SSPTRWTSATSTSGTSSARRASMTAGTRSSSATSSTRTWFAMSLRT*WKKVVY**ITMDV 285
Query: 279 ISFQNVGLTS*LCSRLTTQFCMIA*RAEVTWV 374
ISFQNVGLT *LCS+ TQFCMIA* AEV WV
Sbjct: 286 ISFQNVGLTL*LCSKQITQFCMIA*LAEVIWV 381
Score = 95.9 bits (203), Expect(2) = 2e-080
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 211 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 32
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 31 PPRDAIAR 8
Score = 46.9 bits (96), Expect(2) = 2e-032
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGD 536
T+R *C CEVT WRI VG H*Q G*T GD
Sbjct: 448 TKRR**CPCEVTMWRISVGMWAH*QNG*TTGD 543
>gb|AACV01015874.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015874, whole
genome shotgun sequence
Length = 11733
Score = 138 bits (295), Expect(3) = 1e-085
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 4858 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 5037
Query: 539 S 541
S
Sbjct: 5038 S 5040
Score = 123 bits (264), Expect(3) = 1e-085
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +2
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 4628 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 4783
Score = 111 bits (238), Expect(3) = 8e-063
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -1
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 5034 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 4855
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 4854 NRTLSQK* 4831
Score = 109 bits (232), Expect(3) = 1e-085
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 1263 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 1442
Query: 212 LV 217
LV
Sbjct: 1443 LV 1448
Score = 104 bits (222), Expect(2) = 5e-036
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -3
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 4783 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 4628
Score = 95.9 bits (203), Expect(3) = 8e-063
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -3
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 1435 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 1256
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 1255 PPRDAIAR 1232
Score = 87.2 bits (184), Expect(2) = 6e-035
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1 / +3
Query: 358 QRLHGFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
QRL+G QA +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET
Sbjct: 4857 QRLYGCQAHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLET 5036
Query: 538 *LDLS 552
+LS
Sbjct: 5037 IPELS 5051
Score = 86.8 bits (183), Expect(3) = 8e-063
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = -2 / -2
Query: 359 CPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
C S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 4772 C*SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 4638
Score = 84.5 bits (178), Expect(2) = 6e-035
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 219 ATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RA 359
A SLRT*WKKVVY**IT DVISFQNVGLT *LCS+ TQFCMIA* A
Sbjct: 4632 AMSLRT*WKKVVY**ITMDVISFQNVGLTL*LCSKQITQFCMIA*LA 4772
Score = 83.1 bits (175), Expect(3) = 1e-021
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = +1 / +1
Query: 214 GVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLH 369
G+R A*G DGRRWYTSRLP M*FLSRTLV*P SCAP+ LNSA*S D Q +H
Sbjct: 4627 GLR*A*GRDGRRWYTSRLPWM*FLSRTLV*PCSCAPNR*LNSA*SLD*QVIH 4782
Score = 70.7 bits (148), Expect(2) = 5e-036
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -1 / -2
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PL 358
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL
Sbjct: 5015 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PL 4857
Score = 46.9 bits (96), Expect(3) = 1e-021
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +3 / +2
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*TIGD 536
T+R *C CEVT WRI VG H*Q G*T GD
Sbjct: 4940 TKRR**CPCEVTMWRISVGMWAH*QNG*TTGD 5035
Score = 25.4 bits (49), Expect(3) = 1e-021
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +3 / +1
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTW 215
S PT +SSA SSTRTW
Sbjct: 1330 SSPTRWTSATSTSGTSSARRASMTAGTRSSSATSSTRTW 1446
>dbj|AP003889.2| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1213_A07,
*** SEQUENCING IN PROGRESS ***
Length = 119829
Score = 138 bits (295), Expect(3) = 1e-083
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +2
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 18845 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 19024
Query: 539 S 541
S
Sbjct: 19025 S 19027
Score = 123 bits (264), Expect(3) = 1e-083
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +3
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 18615 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 18770
Score = 111 bits (238), Expect(3) = 8e-061
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 19021 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 18842
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 18841 NRTLSQK* 18818
Score = 109 bits (232), Expect(3) = 1e-083
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 15250 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 15429
Query: 212 LV 217
LV
Sbjct: 15430 LV 15435
Score = 104 bits (222), Expect(2) = 5e-036
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 18770 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 18615
Score = 95.9 bits (203), Expect(3) = 8e-061
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 15422 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 15243
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 15242 PPRDAIAR 15219
Score = 87.2 bits (184), Expect(2) = 6e-035
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1 / +1
Query: 358 QRLHGFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
QRL+G QA +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET
Sbjct: 18844 QRLYGCQAHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLET 19023
Query: 538 *LDLS 552
+LS
Sbjct: 19024 IPELS 19038
Score = 86.8 bits (183), Expect(3) = 8e-061
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = -2 / -1
Query: 359 CPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
C S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 18759 C*SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 18625
Score = 84.5 bits (178), Expect(2) = 6e-035
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +3 / +1
Query: 219 ATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RA 359
A SLRT*WKKVVY**IT DVISFQNVGLT *LCS+ TQFCMIA* A
Sbjct: 18619 AMSLRT*WKKVVY**ITMDVISFQNVGLTL*LCSKQITQFCMIA*LA 18759
Score = 70.7 bits (148), Expect(2) = 5e-036
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -1 / -1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PL 358
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL
Sbjct: 19002 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PL 18844
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0710F09
Length = 198867
Score = 138 bits (295), Expect(3) = 4e-083
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 134689 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 134868
Query: 539 S 541
S
Sbjct: 134869 S 134871
Score = 123 bits (264), Expect(3) = 4e-083
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +2
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 134459 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 134614
Score = 111 bits (238), Expect(3) = 2e-060
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -1
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 134865 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 134686
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 134685 NRTLSQK* 134662
Score = 109 bits (232), Expect(3) = 4e-083
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 131094 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 131273
Query: 212 LV 217
LV
Sbjct: 131274 LV 131279
Score = 104 bits (222), Expect(2) = 5e-036
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -3
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 134614 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 134459
Score = 95.9 bits (203), Expect(3) = 2e-060
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -3
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 131266 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 131087
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 131086 PPRDAIAR 131063
Score = 87.2 bits (184), Expect(2) = 6e-035
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1 / +3
Query: 358 QRLHGFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
QRL+G QA +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET
Sbjct: 134688 QRLYGCQAHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLET 134867
Query: 538 *LDLS 552
+LS
Sbjct: 134868 IPELS 134882
Score = 86.8 bits (183), Expect(3) = 2e-060
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = -2 / -2
Query: 359 CPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
C S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 134603 C*SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 134469
Score = 84.5 bits (178), Expect(2) = 6e-035
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 219 ATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RA 359
A SLRT*WKKVVY**IT DVISFQNVGLT *LCS+ TQFCMIA* A
Sbjct: 134463 AMSLRT*WKKVVY**ITMDVISFQNVGLTL*LCSKQITQFCMIA*LA 134603
Score = 70.7 bits (148), Expect(2) = 5e-036
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -1 / -2
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PL 358
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL
Sbjct: 134846 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PL 134688
>gb|CH401223.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000060
genomic scaffold, whole genome shotgun sequence
Length = 1552265
Score = 138 bits (295), Expect(3) = 2e-081
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 647485 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 647664
Query: 539 S 541
S
Sbjct: 647665 S 647667
Score = 123 bits (264), Expect(3) = 2e-081
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +2
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 647255 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 647410
Score = 111 bits (238), Expect(3) = 1e-058
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 647661 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 647482
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 647481 NRTLSQK* 647458
Score = 109 bits (232), Expect(3) = 2e-081
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 643890 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 644069
Query: 212 LV 217
LV
Sbjct: 644070 LV 644075
Score = 104 bits (222), Expect(2) = 5e-036
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 647410 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 647255
Score = 95.9 bits (203), Expect(3) = 1e-058
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -1 / -2
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LM WHS S+SQPS RLFSRTRSPML WRR ASARSEH VTSTFGR R P
Sbjct: 644062 LMMWHSSSSSQPSWRLFSRTRSPMLMWRRSTASARSEHVVVFPVPGVPVTSTFGRVRRAP 643883
Query: 24 PPLPAASR 1
PP A +R
Sbjct: 643882 PPRDAIAR 643859
Score = 87.2 bits (184), Expect(2) = 6e-035
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +1 / +3
Query: 358 QRLHGFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET 537
QRL+G QA +QHR+ N P AP GG+GELQRG DA+AK*Q GGY *E DR+ KQLET
Sbjct: 647484 QRLYGCQAHKQHRM*NFPDAPGGGKGELQRGDSDALAK*QCGGYQ*ECGHTDRMDKQLET 647663
Query: 538 *LDLS 552
+LS
Sbjct: 647664 IPELS 647678
Score = 86.8 bits (183), Expect(3) = 1e-058
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = -2 / -1
Query: 359 CPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
C S DHAELS GAQL+GQTNVLERNHI GNLLVYHLLPS PQA
Sbjct: 647399 C*SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLVYHLLPSRPQA 647265
Score = 84.5 bits (178), Expect(2) = 6e-035
Identities = 40/47 (85%), Positives = 41/47 (87%)
Frame = +3 / +3
Query: 219 ATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RA 359
A SLRT*WKKVVY**IT DVISFQNVGLT *LCS+ TQFCMIA* A
Sbjct: 647259 AMSLRT*WKKVVY**ITMDVISFQNVGLTL*LCSKQITQFCMIA*LA 647399
Score = 70.7 bits (148), Expect(2) = 5e-036
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -1 / -1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PL 358
SV+ PTFLLISSTLSLR GIT+ S WKISHSML SL P+*PL
Sbjct: 647642 SVSVPTFLLISSTLSLRKGITISSL*LSLASSRSIWKISHSMLFVSLAPI*PL 647484
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 138 bits (295), Expect(3) = 2e-079
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +3
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 657228 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 657407
Query: 539 S 541
S
Sbjct: 657408 S 657410
Score = 123 bits (264), Expect(3) = 2e-079
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +1
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 656998 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 657153
Score = 111 bits (238), Expect = 6e-023
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -2
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 657404 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 657225
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 657224 NRTLSQK* 657201
Score = 109 bits (232), Expect(3) = 2e-079
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +2
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 653633 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 653812
Query: 212 LV 217
LV
Sbjct: 653813 LV 653818
Score = 104 bits (222), Expect = 1e-020
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -1
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 657153 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 656998
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 138 bits (295), Expect(3) = 6e-079
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 12080962 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 12081141
Query: 539 S 541
S
Sbjct: 12081142 S 12081144
Score = 123 bits (264), Expect(3) = 6e-079
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +2
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 12080732 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 12080887
Score = 111 bits (238), Expect = 6e-023
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 12081138 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 12080959
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 12080958 NRTLSQK* 12080935
Score = 109 bits (232), Expect(3) = 6e-079
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 12077367 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 12077546
Query: 212 LV 217
LV
Sbjct: 12077547 LV 12077552
Score = 104 bits (222), Expect = 1e-020
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 12080887 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 12080732
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 138 bits (295), Expect(3) = 7e-079
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRP 538
RGYMG+KL NNIECEIFQ+LLEEARESY+E+IVMPLRSDNVEDISRNVG LT+W+NNWRP
Sbjct: 12876565 RGYMGAKLTNNIECEIFQMLLEEARESYKEEIVMPLRSDNVEDISRNVGTLTEWINNWRP 12876744
Query: 539 S 541
S
Sbjct: 12876745 S 12876747
Score = 123 bits (264), Expect(3) = 7e-079
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2 / +2
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYM 370
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT R +M
Sbjct: 12876335 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSR*FM 12876490
Score = 111 bits (238), Expect = 6e-023
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = -3 / -3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+VTSQ HH +L VALP LL+EHLE+F YVV ELGTH+TS
Sbjct: 12876741 SPVVYPFCQCAHIPTDILHIVTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSV 12876562
Query: 355 RQAIMQN* 332
+ + Q *
Sbjct: 12876561 NRTLSQK* 12876538
Score = 109 bits (232), Expect(3) = 7e-079
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2 / +3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R RPNVLV CSLLADA LRH+NIGDLVREKSLHDGWD +LECH+INED
Sbjct: 12872970 RRTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINED 12873149
Query: 212 LV 217
LV
Sbjct: 12873150 LV 12873155
Score = 104 bits (222), Expect = 1e-020
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = -3 / -2
Query: 370 HVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAH 215
H A QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*YTTFFHHVLKL+A+
Sbjct: 12876490 HELPASQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*YTTFFHHVLKLIAN 12876335
>gb|CX728620.1|CX728620 OSJNEf09O05.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09O05 3', mRNA sequence
Length = 600
Score = 220 bits (475), Expect = 1e-055
Identities = 86/96 (89%), Positives = 92/96 (95%)
Frame = +2 / -2
Query: 254 ILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANNIECEIFQVLLEEAR 433
ILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLT RGYMG+KL NNIECEIFQ+LLEEAR
Sbjct: 599 ILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTSRGYMGAKLTNNIECEIFQMLLEEAR 420
Query: 434 ESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS 541
ESY+E+IVMPLRS NVEDISRNVG LT+W+NNWRPS
Sbjct: 419 ESYKEEIVMPLRSANVEDISRNVGTLTEWINNWRPS 312
Score = 176 bits (378), Expect = 3e-042
Identities = 70/94 (74%), Positives = 82/94 (87%)
Frame = -3 / +3
Query: 535 SPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTSA 356
SP+VYP CQC ++PT+ILH+ TSQ HH +L VALP LL+EHLE+F YVV ELGTH+TSA
Sbjct: 318 SPVVYPFCQCAHIPTDILHIGTSQGHHYLLFVALPCLLQEHLENFTFYVVCELGTHITSA 497
Query: 355 RQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*Y 254
QAIMQN*V+ LEHNY+VKPTFWKEITS+VIY*Y
Sbjct: 498 SQAIMQN*VICLEHNYKVKPTFWKEITSMVIY*Y 599
Score = 131 bits (280), Expect = 1e-028
Identities = 67/100 (67%), Positives = 75/100 (75%)
Frame = +1 / -1
Query: 253 YTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGFQARQQHRVRNLPSAPRGGE 432
YTSRLP M*FLSRTLV*P SCAP+ LNSA*S D QRL+G QA +QHR+ N P A GG+
Sbjct: 600 YTSRLPWM*FLSRTLV*PCSCAPNR*LNSA*SLD*QRLYGCQAHKQHRM*NFPDALGGGK 421
Query: 433 GELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET*LDLS 552
GELQRG DA+AK Q GGY *E DR+ KQLET +LS
Sbjct: 420 GELQRGDSDALAKCQCGGYQ*ECGHTDRMDKQLETIPELS 301
Score = 125 bits (267), Expect = 6e-027
Identities = 56/79 (70%), Positives = 61/79 (77%)
Frame = -1 / +1
Query: 516 SVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSCR 337
SV+ PTFLLISSTL+LR GIT+ S WKISHSML SL P+*PL V+RSCR
Sbjct: 337 SVSVPTFLLISSTLALRKGITISSL*LSLASSKSIWKISHSMLFVSLAPI*PLLVKRSCR 516
Query: 336 IELSVWSTTTRSNQRSGKK 280
IELSVWSTTTRSNQRSGKK
Sbjct: 517 IELSVWSTTTRSNQRSGKK 573
Score = 93.6 bits (198), Expect(2) = 1e-022
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = -2 / +2
Query: 416 ALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLV 255
A G+F LCC AW+P NLC S DHAELS GAQL+GQTNVLERNHI GNLLV
Sbjct: 437 ASGKFHILCCL*AWHPYNLC*SSDHAELSYLFGAQLQGQTNVLERNHIHGNLLV 598
Score = 36.8 bits (74), Expect(2) = 1e-022
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2 / +2
Query: 536 VSNCLPSLSMHLRSY*YPPRCHFAMA 459
VS+CL LS+ SY*YPP HFA A
Sbjct: 317 VSSCLSILSVCPHSY*YPPHWHFARA 394
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,780,803,622
Number of Sequences: 438736
Number of extensions: 52596776
Number of successful extensions: 292756
Number of sequences better than 1.0e-020: 14
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 153382351889
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)