TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2921788.2.1
         (606 letters)

Database: Oryza_nucl_with_EST.fasta 
           438,736 sequences; 2,800,419,916 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AK106296.1|  Oryza sativa (japonica cultivar-group) cDNA...   113   2e-030
ref|NT_107192.1|  Oryza sativa (japonica cultivar-group)          112   2e-030
gb|AC137267.2|  Genomic sequence for Oryza sativa, Nipponbar...   112   2e-030
gb|AU225644.1|AU225644  AU225644 Oryza sativa Koshihikari pi...   111   8e-030
gb|CH401173.1|  Oryza sativa (japonica cultivar-group) chrom...    78   3e-027
gb|AACV01006434.1|  Oryza sativa (japonica cultivar-group) c...    78   3e-027
dbj|AP008209.1|  Oryza sativa (japonica cultivar-group) geno...   112   3e-023
gb|DP000009.1|  Oryza sativa (japonica cultivar-group) chrom...   112   3e-023
>dbj|AK106296.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B11, full
           insert sequence
          Length = 667

 Score =  113 bits (241), Expect(2) = 2e-030
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = +1 / +3

                                                            
Query: 175 AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG* 321
           AWCFSDPEMKRRRRVASYKAYS EGKVK+S  RGFRWIKAKCSELIHG*
Sbjct: 255 AWCFSDPEMKRRRRVASYKAYSVEGKVKSSLRRGFRWIKAKCSELIHG* 401

 Score = 43.2 bits (88), Expect(2) = 2e-030
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / +3

                            
Query: 70  EVVPYGDRRIDIIVKPP 120
           EVVPYGDRRID++VKPP
Sbjct: 117 EVVPYGDRRIDVVVKPP 167
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
          Length = 4781381

 Score =  112 bits (240), Expect(2) = 2e-030
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +1 / +1

                                                               
Query: 175     AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG 318
               AWCFSDPEMKRRRRVASYKAYS EGKVK+S  RGFRWIKAKCSELIHG
Sbjct: 1978546 AWCFSDPEMKRRRRVASYKAYSVEGKVKSSLRRGFRWIKAKCSELIHG 1978689

 Score = 43.2 bits (88), Expect(2) = 2e-030
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / +1

                                
Query: 70      EVVPYGDRRIDIIVKPP 120
               EVVPYGDRRID++VKPP
Sbjct: 1978408 EVVPYGDRRIDVVVKPP 1978458
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score =  112 bits (240), Expect(2) = 2e-030
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +1 / +3

                                                             
Query: 175   AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG 318
             AWCFSDPEMKRRRRVASYKAYS EGKVK+S  RGFRWIKAKCSELIHG
Sbjct: 51543 AWCFSDPEMKRRRRVASYKAYSVEGKVKSSLRRGFRWIKAKCSELIHG 51686

 Score = 43.2 bits (88), Expect(2) = 2e-030
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / +3

                              
Query: 70    EVVPYGDRRIDIIVKPP 120
             EVVPYGDRRID++VKPP
Sbjct: 51405 EVVPYGDRRIDVVVKPP 51455
>gb|AU225644.1|AU225644 AU225644 Oryza sativa Koshihikari pistil Oryza sativa (japonica
           cultivar-group) cDNA clone KP3-0625, mRNA sequence
          Length = 482

 Score =  111 bits (236), Expect(2) = 8e-030
 Identities = 44/49 (89%), Positives = 45/49 (91%)
 Frame = +1 / +2

                                                            
Query: 175 AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG* 321
           AWCFSDPEMKRRRRVASYKAYS EG VK+S  RGFRWIKAKCSELIHG*
Sbjct: 266 AWCFSDPEMKRRRRVASYKAYSVEGNVKSSLRRGFRWIKAKCSELIHG* 412

 Score = 43.2 bits (88), Expect(2) = 8e-030
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / +2

                            
Query: 70  EVVPYGDRRIDIIVKPP 120
           EVVPYGDRRID++VKPP
Sbjct: 128 EVVPYGDRRIDVVVKPP 178
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
                scaffold, whole genome shotgun sequence
          Length = 13858245

 Score = 77.6 bits (163), Expect(3) = 3e-027
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = +1 / +3

                                                   
Query: 175      AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGF 279
                AWCFSDPEMKRRRR+ASYKAYS EGKVK+S  RGF
Sbjct: 10711302 AWCFSDPEMKRRRRLASYKAYSVEGKVKSSLRRGF 10711406

 Score = 43.2 bits (88), Expect(3) = 3e-027
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / +3

                                 
Query: 70       EVVPYGDRRIDIIVKPP 120
                EVVPYGDRRID++VKPP
Sbjct: 10711164 EVVPYGDRRIDVVVKPP 10711214

 Score = 42.3 bits (86), Expect(3) = 3e-027
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1 / +1

                               
Query: 274      GFRWIKAKCSELIHG 318
                GFRWIKAKCSELIHG
Sbjct: 10711402 GFRWIKAKCSELIHG 10711446
>gb|AACV01006434.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006434, whole
            genome shotgun sequence
          Length = 38209

 Score = 77.6 bits (163), Expect(3) = 3e-027
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = +1 / -3

                                               
Query: 175  AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGF 279
            AWCFSDPEMKRRRR+ASYKAYS EGKVK+S  RGF
Sbjct: 3317 AWCFSDPEMKRRRRLASYKAYSVEGKVKSSLRRGF 3213

 Score = 43.2 bits (88), Expect(3) = 3e-027
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1 / -3

                             
Query: 70   EVVPYGDRRIDIIVKPP 120
            EVVPYGDRRID++VKPP
Sbjct: 3455 EVVPYGDRRIDVVVKPP 3405

 Score = 42.3 bits (86), Expect(3) = 3e-027
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1 / -1

                           
Query: 274  GFRWIKAKCSELIHG 318
            GFRWIKAKCSELIHG
Sbjct: 3217 GFRWIKAKCSELIHG 3173
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  112 bits (240), Expect = 3e-023
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +1 / +1

                                                                
Query: 175      AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG 318
                AWCFSDPEMKRRRRVASYKAYS EGKVK+S  RGFRWIKAKCSELIHG
Sbjct: 10632730 AWCFSDPEMKRRRRVASYKAYSVEGKVKSSLRRGFRWIKAKCSELIHG 10632873
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  112 bits (240), Expect = 3e-023
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +1 / +1

                                                                
Query: 175      AWCFSDPEMKRRRRVASYKAYSAEGKVKASFPRGFRWIKAKCSELIHG 318
                AWCFSDPEMKRRRRVASYKAYS EGKVK+S  RGFRWIKAKCSELIHG
Sbjct: 10634629 AWCFSDPEMKRRRRVASYKAYSVEGKVKSSLRRGFRWIKAKCSELIHG 10634772
  Database: Oryza_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:41 PM
  Number of letters in database: 2,800,419,916
  Number of sequences in database:  438,736
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 3,115,788,608
Number of Sequences: 438736
Number of extensions: 43746397
Number of successful extensions: 233178
Number of sequences better than 1.0e-020: 11
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 129847806231
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)