TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750927.2.1
(1331 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA... 392 e-117
gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6... 392 e-117
gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flow... 392 e-107
gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-... 182 7e-094
dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA... 182 7e-094
ref|XM_473638.1| Oryza sativa (japonica cultivar-group), p... 182 3e-092
dbj|AP004178.3| Oryza sativa (japonica cultivar-group) geno... 141 1e-069
gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) c... 141 3e-061
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 141 1e-060
dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA... 131 4e-057
gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8... 131 4e-057
emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromoso... 141 4e-055
dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA... 131 6e-055
ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA 131 6e-055
gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) ... 131 7e-055
gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5... 123 1e-054
dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA... 123 1e-054
ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA 123 1e-054
emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein 128 9e-054
gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS ... 129 1e-053
dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA... 122 3e-053
dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA... 122 4e-053
gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid ... 122 4e-053
gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-... 131 4e-051
dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA... 115 1e-050
gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-... 115 1e-050
gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-... 115 1e-050
ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA 115 1e-050
dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA... 115 3e-050
gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS ... 119 5e-050
gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-... 119 2e-049
dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA... 119 2e-049
gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-... 115 3e-049
ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA 118 3e-049
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 141 1e-048
gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-... 119 3e-048
ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA 120 3e-048
emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box pro... 120 3e-048
dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA... 119 4e-048
dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA... 120 4e-048
ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA 118 6e-048
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 141 6e-047
dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA... 119 1e-046
gb|AACV01005163.1| Oryza sativa (japonica cultivar-group) c... 79 2e-044
gb|AY345220.1| Oryza sativa (japonica cultivar-group) trans... 184 2e-044
gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pi... 106 5e-044
ref|XM_472756.1| Oryza sativa (japonica cultivar-group), p... 182 1e-043
gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS ... 128 3e-043
dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA... 127 9e-043
dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA... 127 9e-043
dbj|AK104921.1| Oryza sativa (japonica cultivar-group) cDNA... 127 9e-043
dbj|AK070958.1| Oryza sativa (japonica cultivar-group) cDNA... 122 2e-042
gb|AY551913.1| Oryza sativa (japonica cultivar-group) MADS-... 122 2e-042
ref|XM_463559.1| Oryza sativa (japonica cultivar-group), p... 121 3e-042
gb|CF315263.1|CF315263 HD--04-B23.b1 OsHDAC1-overexpressing... 119 5e-042
dbj|AK070425.1| Oryza sativa (japonica cultivar-group) cDNA... 118 6e-042
gb|AY332475.1| Oryza sativa (japonica cultivar-group) MADS ... 118 6e-042
dbj|AK070135.1| Oryza sativa (japonica cultivar-group) cDNA... 116 4e-040
gb|AY551919.1| Oryza sativa (japonica cultivar-group) MADS-... 116 4e-040
ref|NM_197541.1| Oryza sativa (japonica cultivar-group) put... 116 4e-040
gb|CB659436.1|CB659436 OSJNEc16G22.f OSJNEc Oryza sativa (j... 116 4e-040
gb|AY345224.1| Oryza sativa (japonica cultivar-group) trans... 116 1e-039
gb|CB658195.1|CB658195 OSJNEc14A21.f OSJNEc Oryza sativa (j... 116 2e-039
gb|AY177702.1| Oryza sativa (japonica cultivar-group) trans... 113 2e-039
ref|XM_467621.1| Oryza sativa (japonica cultivar-group), mRNA 113 2e-039
gb|AY177696.1| Oryza sativa (japonica cultivar-group) trans... 108 2e-039
gb|AY224482.1| Oryza sativa (japonica cultivar-group) isola... 112 4e-039
gb|CV720574.1|CV720574 YBH--01-B14.b1 Rice before heading y... 93 7e-039
gb|AACV01006102.1| Oryza sativa (japonica cultivar-group) c... 122 1e-038
gb|CV721367.1|CV721367 YBH--03-N20.b1 Rice before heading y... 89 1e-037
gb|AY551912.1| Oryza sativa (japonica cultivar-group) MADS-... 118 2e-037
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 122 1e-036
gb|AC105732.3| Oryza sativa (japonica cultivar-group) chrom... 122 3e-036
gb|AACV01018907.1| Oryza sativa (japonica cultivar-group) c... 131 5e-035
gb|AY250075.1| Oryza sativa (japonica cultivar-group) MADS2... 100 1e-034
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 122 3e-034
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 131 4e-034
dbj|AK109522.1| Oryza sativa (japonica cultivar-group) cDNA... 103 5e-034
ref|XM_464283.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-034
ref|XM_467915.1| Oryza sativa (japonica cultivar-group), mRNA 101 5e-034
dbj|AB107957.1| Oryza sativa (japonica cultivar-group) RMD1... 101 5e-034
dbj|AB003322.1| Oryza sativa (japonica cultivar-group) mRNA... 101 5e-034
gb|CB652556.1|CB652556 OSJNEc02K24.f OSJNEc Oryza sativa (j... 101 5e-034
gb|AY177700.1| Oryza sativa (japonica cultivar-group) trans... 99 7e-034
dbj|AK070121.1| Oryza sativa (japonica cultivar-group) cDNA... 101 9e-034
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 131 2e-033
gb|AACV01013077.1| Oryza sativa (japonica cultivar-group) c... 123 6e-033
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 122 1e-032
dbj|AP005529.3| Oryza sativa (japonica cultivar-group) geno... 131 1e-032
gb|AACV01007934.1| Oryza sativa (japonica cultivar-group) c... 119 7e-032
gb|AACV01016746.1| Oryza sativa (japonica cultivar-group) c... 120 1e-031
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 119 1e-031
dbj|AB026295.2| Oryza sativa (japonica cultivar-group) geno... 123 2e-031
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 131 2e-031
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 119 2e-031
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 119 2e-031
gb|AACV01005162.1| Oryza sativa (japonica cultivar-group) c... 141 2e-031
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-031
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-031
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-031
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 141 2e-031
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 141 2e-031
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 119 2e-031
dbj|AK111859.1| Oryza sativa (japonica cultivar-group) cDNA... 97 5e-031
gb|AACV01015031.1| Oryza sativa (japonica cultivar-group) c... 119 7e-031
gb|D22380.1|D22380 RICC10934A Rice callus Oryza sativa (jap... 139 7e-031
gb|AY345222.1| Oryza sativa (japonica cultivar-group) trans... 97 1e-030
gb|CF322477.1|CF322477 HDN--01-C18.g1 OsHDAC1-overexpressin... 101 2e-030
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 123 2e-030
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 120 3e-030
gb|AY345223.2| Oryza sativa (japonica cultivar-group) trans... 97 4e-030
gb|AACV01002820.1| Oryza sativa (japonica cultivar-group) c... 119 5e-030
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 119 6e-030
gb|C75937.1|C75937 C75937 Rice callus Oryza sativa (japonic... 122 6e-030
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 119 8e-030
gb|CB655394.1|CB655394 OSJNEc08M08.r OSJNEc Oryza sativa (j... 116 9e-030
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 119 1e-029
gb|AACV01024177.1| Oryza sativa (japonica cultivar-group) c... 118 1e-029
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-029
dbj|AP003379.2| Oryza sativa (japonica cultivar-group) geno... 119 2e-029
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 119 3e-029
gb|CF297258.1|CF297258 30DGS--07-P17.b1 Rice leaf plasmid c... 127 3e-029
dbj|AK108568.1| Oryza sativa (japonica cultivar-group) cDNA... 133 3e-029
gb|AY553724.1| Oryza sativa (japonica cultivar-group) MADS-... 133 3e-029
ref|NM_188300.1| Oryza sativa (japonica cultivar-group), p... 133 3e-029
gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJN... 119 3e-029
emb|AJ536158.1|OSA536158 Oryza sativa (japonica cultivar-gr... 97 4e-029
gb|AY345221.1| Oryza sativa (japonica cultivar-group) trans... 97 4e-029
emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC O... 118 5e-029
emb|AL513004.1|CNS07EFJ Oryza sativa (japonica cultivar-gro... 118 6e-029
emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC O... 118 6e-029
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 119 7e-029
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 119 7e-029
emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B... 118 7e-029
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 118 2e-028
gb|AQ578837.1|AQ578837 nbxb0093F09f CUGI Rice BAC Library O... 131 2e-028
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 131 2e-028
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 131 2e-028
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 131 2e-028
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 131 2e-028
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 131 2e-028
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 131 2e-028
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 119 5e-028
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-027
gb|AU068508.1|AU068508 AU068508 Rice callus Oryza sativa (j... 116 3e-027
dbj|AK111723.1| Oryza sativa (japonica cultivar-group) cDNA... 124 2e-026
dbj|AB232157.1| Oryza sativa (japonica cultivar-group) mRNA... 124 2e-026
gb|AQ271415.1|AQ271415 nbxb0025B08f CUGI Rice BAC Library O... 123 4e-026
gb|AQ330858.1|AQ330858 nbxb0048E10f CUGI Rice BAC Library O... 123 4e-026
gb|AQ575051.1|AQ575051 nbxb0086L17r CUGI Rice BAC Library O... 123 4e-026
gb|AU225127.1|AU225127 AU225127 Oryza sativa Koshihikari pi... 123 4e-026
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 123 4e-026
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 123 4e-026
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 122 7e-026
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 122 7e-026
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 122 7e-026
gb|AACV01004772.1| Oryza sativa (japonica cultivar-group) c... 100 1e-025
gb|AY551924.1| Oryza sativa (japonica cultivar-group) MADS-... 107 1e-025
dbj|AK070894.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-025
ref|XM_463532.1| Oryza sativa (japonica cultivar-group), p... 107 1e-025
gb|AY177693.1| Oryza sativa (japonica cultivar-group) trans... 121 2e-025
gb|AACV01003159.1| Oryza sativa (japonica cultivar-group) c... 105 3e-025
gb|D46933.1|D46933 RICS11905A Rice green shoot Oryza sativa... 120 3e-025
dbj|AP004049.2| Oryza sativa (japonica cultivar-group) geno... 105 4e-025
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 120 5e-025
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 120 5e-025
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 120 5e-025
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 120 5e-025
dbj|AP006720.1| Oryza sativa (japonica cultivar-group) geno... 105 5e-025
gb|C74564.1|C74564 C74564 Rice panicle shorter than 3cm Ory... 119 9e-025
dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA... 119 9e-025
gb|AACV01000383.1| Oryza sativa (japonica cultivar-group) c... 119 9e-025
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 119 9e-025
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 119 9e-025
dbj|AP003105.2| Oryza sativa (japonica cultivar-group) geno... 119 9e-025
dbj|AP003197.4| Oryza sativa (japonica cultivar-group) geno... 119 9e-025
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 119 9e-025
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 119 9e-025
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 119 9e-025
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 119 9e-025
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 100 9e-025
dbj|AP004766.1| Oryza sativa (japonica cultivar-group) chro... 100 9e-025
gb|C72923.1|C72923 C72923 Rice panicle at flowering stage O... 118 1e-024
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 118 2e-024
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 118 2e-024
gb|AACV01009916.1| Oryza sativa (japonica cultivar-group) c... 102 3e-024
gb|CF332627.1|CF332627 JMT--01-D10.b1 AtJMT-overexpressing ... 116 4e-024
gb|CF334759.1|CF334759 JMT--04-C18.b1 AtJMT-overexpressing ... 116 4e-024
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 116 4e-024
gb|AACV01022000.1| Oryza sativa (japonica cultivar-group) c... 116 4e-024
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 116 4e-024
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 116 4e-024
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 116 4e-024
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 116 4e-024
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 116 4e-024
gb|AACV01024998.1| Oryza sativa (japonica cultivar-group) c... 100 7e-024
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 105 1e-023
emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC O... 100 2e-023
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 102 2e-023
gb|AC098695.2| Oryza sativa (japonica cultivar-group) chrom... 114 3e-023
gb|AY551915.1| Oryza sativa (japonica cultivar-group) MADS-... 114 3e-023
gb|AACV01005781.1| Oryza sativa (japonica cultivar-group) c... 114 3e-023
ref|XM_468584.1| Oryza sativa (japonica cultivar-group), p... 114 3e-023
ref|XM_482530.1| Oryza sativa (japonica cultivar-group), mRNA 114 3e-023
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 114 3e-023
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 100 3e-023
emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromoso... 102 3e-023
gb|CB682181.1|CB682181 OSJNEf09D09.f OSJNEf Oryza sativa (j... 113 4e-023
gb|AY177694.1| Oryza sativa (japonica cultivar-group) trans... 113 4e-023
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 105 5e-023
dbj|AK100233.1| Oryza sativa (japonica cultivar-group) cDNA... 100 6e-023
dbj|AK102927.1| Oryza sativa (japonica cultivar-group) cDNA... 112 7e-023
gb|AY177695.2| Oryza sativa (japonica cultivar-group) trans... 112 7e-023
ref|XM_471721.1| Oryza sativa (japonica cultivar-group), p... 112 7e-023
gb|CF294135.1|CF294135 30DGS--03-I23.g1 Rice leaf plasmid c... 112 1e-022
gb|CF309429.1|CF309429 ABF--03-J22.g1 ABF3-overexpressing t... 111 1e-022
gb|AC135920.2| Oryza sativa (japonica cultivar-group) chrom... 111 2e-022
gb|AACV01011127.1| Oryza sativa (japonica cultivar-group) c... 111 2e-022
ref|NT_107224.1| Oryza sativa (japonica cultivar-group) 111 2e-022
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 111 2e-022
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 111 2e-022
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 111 2e-022
gb|AU069848.1|AU069848 AU069848 Rice panicle at flowering s... 111 3e-022
gb|AU088583.1|AU088583 AU088583 Rice callus Oryza sativa (j... 111 3e-022
gb|AU094650.1|AU094650 AU094650 Rice panicle (longer than 1... 111 3e-022
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 102 4e-022
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 100 6e-022
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 100 6e-022
gb|AACV01002803.1| Oryza sativa (japonica cultivar-group) c... 107 1e-021
gb|CF336890.1|CF336890 JMT--07-B20.b1 AtJMT-overexpressing ... 108 1e-021
gb|CV731070.1|CV731070 FLO--04-O21.g1 Rice flower lambda ph... 108 1e-021
dbj|AB003327.1| Oryza sativa (japonica cultivar-group) mRNA... 108 1e-021
dbj|AK066160.1| Oryza sativa (japonica cultivar-group) cDNA... 108 1e-021
gb|AY551923.1| Oryza sativa (japonica cultivar-group) MADS-... 108 2e-021
gb|AC090974.1|AC090974 Oryza sativa (japonica cultivar-grou... 107 2e-021
dbj|AP003405.1| Oryza sativa (japonica cultivar-group) chro... 107 2e-021
dbj|AP003561.2| Oryza sativa (japonica cultivar-group) geno... 107 2e-021
gb|CB666400.1|CB666400 OSJNEd13E17.f OSJNEd Oryza sativa (j... 106 5e-021
dbj|AP005010.1| Oryza sativa (japonica cultivar-group) chro... 106 5e-021
dbj|AP004888.3| Oryza sativa (japonica cultivar-group) geno... 106 5e-021
dbj|AP005751.3| Oryza sativa (japonica cultivar-group) geno... 106 5e-021
gb|AACV01005341.1| Oryza sativa (japonica cultivar-group) c... 106 5e-021
gb|D15657.2|D15657 RICC1032A Rice callus Oryza sativa (japo... 106 6e-021
gb|CA755986.1|CA755986 BR030032000_PLATE_E04_29_033.ab1 OA ... 105 9e-021
gb|AACV01010477.1| Oryza sativa (japonica cultivar-group) c... 105 9e-021
ref|XM_463804.1| Oryza sativa (japonica cultivar-group), mRNA 105 9e-021
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 105 9e-021
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 105 9e-021
>dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N09, full
insert sequence
Length = 1134
Score = 392 bits (851), Expect(4) = e-117
Identities = 170/193 (88%), Positives = 177/193 (91%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 134 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 313
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
GITKTLERYQHCCYNAQDSN ALSETQSWY EMSKL+AKFEALQRTQRHLLGE+LGPLSV
Sbjct: 314 GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 493
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSNYRT 751
KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKER LGE+NRQLKHKLE EG ++
Sbjct: 494 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 673
Query: 752 LQHAAWPAPGSTM 790
A A G+ +
Sbjct: 674 AMQQASWAQGAVV 712
Score = 282 bits (611), Expect(3) = 4e-081
Identities = 132/191 (69%), Positives = 140/191 (73%)
Frame = -3 / -1
Query: 780 PGAGQAACCRVL*LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHX 601
P A +A C + L++PS SSLCLSCL ISP RSFLRSSSTCSIISCVFLCLACD AH
Sbjct: 702 P*AQEACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHS 523
Query: 600 XXXXXXXXXFTLXXXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQC 421
TL SKCL*VRCKASNFA +FDISWYQL VSESA LES*AL*QQC
Sbjct: 522 SCFSSCCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQLWVSESALLES*AL*QQC 343
Query: 420 WYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSI 241
WYLSKVFVMPALPNS*SLPRLEKMM AFL RPLRRLEKVT LILFS+
Sbjct: 342 WYLSKVFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLILFSM 163
Query: 240 RLSSTRPLPMA 208
R SST PLP++
Sbjct: 162 RFSSTLPLPIS 130
Score = 248 bits (535), Expect(3) = 5e-070
Identities = 119/202 (58%), Positives = 132/202 (65%)
Frame = +1 / +1
Query: 187 GKLEIVRRHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPR 366
G + + R GEG S*A+A REQDQ GHLLQAPQRP QE QPR
Sbjct: 109 GIVRSIGRDGEGKS*AEAHREQDQQAGHLLQAPQRPPQEGLRAVRSLRRRGRAHHLLQPR 288
Query: 367 QALRVRQRRHNKNFRKVPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAW 546
QALRVRQRRHNK+FRKVPTLLLQCSRFQ T *N ELVP NVK E KI AAHS+ALAW
Sbjct: 289 QALRVRQRRHNKDFRKVPTLLLQCSRFQQCTF*NPELVP*NVKVESKI*SFAAHSKALAW 468
Query: 547 GGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S 726
GG+W T+ + +AAA ETA MC +TG+TEKD T DG SG QKGA+ G N ATQ QA
Sbjct: 469 GGSWTTQRQRIAAAGETA*MCTITGETEKDATDDGTSGGTSQKGASAG*N**ATQAQARG 648
Query: 727 *RL*QLQNPAACSLASSRQHHG 792
*R Q A SL S + G
Sbjct: 649 *RFHQQLQSHAASLLGSGRRGG 714
Score = 186 bits (400), Expect(3) = 8e-052
Identities = 81/132 (61%), Positives = 93/132 (70%)
Frame = -2 / -3
Query: 607 TFEXXXXXXXXLHTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVA 428
TF+ +W+K LPKQVPLSALQ +FC Q *HF+VP L FR+C +GILSIVA
Sbjct: 529 TFKLFLQLLQFFDAEWSKILPKQVPLSALQSFKFCFQL*HFMVPTLGFRKCIVGILSIVA 350
Query: 427 AMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLV 248
MLVPF*S CY ERDLGVAE+G+LVGLLE+AVAALGEGDL VDLV
Sbjct: 349 TMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALGEGDLPVDLV 170
Query: 247 LDPLELNSTPPH 212
LD L+LNS+PPH
Sbjct: 169 LDALQLNSSPPH 134
Score = 148 bits (317), Expect(2) = 2e-035
Identities = 71/132 (53%), Positives = 83/132 (62%)
Frame = +3 / +3
Query: 396 *QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNLAH*VXX 575
*Q+L*KGTNI ATMLKIP H LK R GT KCQ+* QN + CSAL+GTCLGR L H
Sbjct: 318 *QRL*KGTNIVATMLKIPTMHFLKPRVGTMKCQS*KQNLKLCSALKGTCLGRILDHSASK 497
Query: 576 XXXXXXXXXXVLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATTEPC 755
V HR+DRER N *W+KW++ AERS +W K GNS+TS +LKV T
Sbjct: 498 NCSSWRNSLNVHYHRRDRERRN**WNKWRNFAERSVSWVKLIGNSSTSSRLKVPPATTEP 677
Query: 756 SMQPGQLPAAPW 791
+P L A W
Sbjct: 678 CSKPPGLRAPWW 713
Score = 101 bits (216), Expect(3) = 2e-024
Identities = 48/71 (67%), Positives = 54/71 (76%)
Frame = -1 / -2
Query: 608 HIRAVSLAAATPSHSVGQVPPQASASECAARPRILPSVLTFPGTSSEFQRVRHWNLEHCS 429
HI+AVS AAA V Q PPQASA ECAA+ +IL S LTF GT+S FQ+V WNLEHCS
Sbjct: 530 HIQAVSPAAAIL*R*VVQDPPQASAFECAAKLQILLSTLTFHGTNSGFQKVHCWNLEHCS 351
Query: 428 SNVGTFLKFLL 396
+NVGTFLK LL
Sbjct: 350 NNVGTFLKSLL 318
Score = 38.6 bits (78), Expect(3) = 8e-052
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / -3
Query: 790 HGAAGSWPGCMLQGSVVATTFSFKLVFELPVHFSQVSLLSAE 665
H A S G + V TF+ +LV ELP++F+Q++LLSA+
Sbjct: 712 HHGALSPGGLLHGSVVAGGTFNLELVLELPINFTQLTLLSAK 587
Score = 35.9 bits (72), Expect(4) = e-117
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 948 RTTSCWDGFFEL 983
RTTSCWDGFFEL
Sbjct: 855 RTTSCWDGFFEL 890
Score = 35.4 bits (71), Expect(3) = 5e-070
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +2
Query: 932 SPPGGENNFMLGWVL* 979
+P G ENNFMLGWVL*
Sbjct: 839 APAGAENNFMLGWVL* 886
Score = 34.1 bits (68), Expect(4) = e-117
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 839 SVAMDCEPTLQIGYP 883
S AMD EPTLQIGYP
Sbjct: 749 SAAMDSEPTLQIGYP 793
Score = 32.2 bits (64), Expect(3) = 2e-024
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 737 YNLQLQACV*VACSFLPGVAPFC 669
+NLQ +AC *VA F P APFC
Sbjct: 659 WNLQPRACA*VAY*FHPADAPFC 591
Score = 32.2 bits (64), Expect(3) = 4e-081
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 978 QRTHPSMKLFSPP 940
QRTHPSMKLFS P
Sbjct: 885 QRTHPSMKLFSAP 847
Score = 31.3 bits (62), Expect(3) = 4e-081
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -3 / -1
Query: 882 GYPICRVGSQSIATD 838
GYPIC+VGS+S+A +
Sbjct: 792 GYPICKVGSESMAAE 748
Score = 30.4 bits (60), Expect(2) = 2e-035
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +1
Query: 946 REQLHAGMGSLS 981
REQLHAGMGSLS
Sbjct: 853 REQLHAGMGSLS 888
Score = 29.5 bits (58), Expect(3) = 8e-052
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 982 NSKNPSQHEVVLAS 941
+SKNPSQHEVVL +
Sbjct: 889 SSKNPSQHEVVLCT 848
Score = 27.6 bits (54), Expect(3) = 2e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 980 LKEPIPA*SCS 948
LKEPIPA*SCS
Sbjct: 887 LKEPIPA*SCS 855
Score = 25.8 bits (50), Expect(3) = 5e-070
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 849 WTVNPLCKSGTLL 887
WT+NP CK G L+
Sbjct: 759 WTLNPPCKLGILI 797
Score = 23.1 bits (44), Expect(4) = e-117
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2 / +2
Query: 890 HQFLPSEAANNIPRSPPGGENN 955
HQF+P+EA + P G N
Sbjct: 794 HQFVPAEANTIQRSTAPAGAEN 859
>gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6) mRNA, complete cds
Length = 1043
Score = 392 bits (851), Expect(4) = e-117
Identities = 170/193 (88%), Positives = 177/193 (91%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 34 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 213
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
GITKTLERYQHCCYNAQDSN ALSETQSWY EMSKL+AKFEALQRTQRHLLGE+LGPLSV
Sbjct: 214 GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 393
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSNYRT 751
KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKER LGE+NRQLKHKLE EG ++
Sbjct: 394 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYR 573
Query: 752 LQHAAWPAPGSTM 790
A A G+ +
Sbjct: 574 AMQQASWAQGAVV 612
Score = 285 bits (616), Expect(3) = 8e-082
Identities = 133/191 (69%), Positives = 141/191 (73%)
Frame = -3 / -1
Query: 780 PGAGQAACCRVL*LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHX 601
P A +A C + L++PS SSLCLSCL ISP RSFLRSSSTCSIISCVFLCLACD AH
Sbjct: 602 P*AQEACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHS 423
Query: 600 XXXXXXXXXFTLXXXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQC 421
TL SKCL*VRCKASNFA +FDISWYQL*VSESA LES*AL*QQC
Sbjct: 422 SCFSSCCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQL*VSESALLES*AL*QQC 243
Query: 420 WYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSI 241
WYLSKVFVMPALPNS*SLPRLEKMM AFL RPLRRLEKVT LILFS+
Sbjct: 242 WYLSKVFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLILFSM 63
Query: 240 RLSSTRPLPMA 208
R SST PLP++
Sbjct: 62 RFSSTLPLPIS 30
Score = 248 bits (536), Expect(3) = 3e-070
Identities = 119/202 (58%), Positives = 132/202 (65%)
Frame = +1 / +3
Query: 187 GKLEIVRRHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPR 366
G + + R GEG S*A+A REQDQ GHLLQAPQRP QE QPR
Sbjct: 9 GIVRSIGRDGEGKS*AEAHREQDQQAGHLLQAPQRPPQEGLRAVRSLRRRGRAHHLLQPR 188
Query: 367 QALRVRQRRHNKNFRKVPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAW 546
QALRVRQRRHNK+FRKVPTLLLQCSRFQ T *NSELVP NVK E KI AAHS+ALAW
Sbjct: 189 QALRVRQRRHNKDFRKVPTLLLQCSRFQQCTF*NSELVP*NVKVESKI*SFAAHSKALAW 368
Query: 547 GGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S 726
GG+W T+ + +AAA ETA MC +TG+TEKD T DG G QKGA+ G N ATQ QA
Sbjct: 369 GGSWTTQRQRIAAAGETA*MCTITGETEKDATDDGTGGGTSQKGASAG*N**ATQAQARG 548
Query: 727 *RL*QLQNPAACSLASSRQHHG 792
*R Q A SL S + G
Sbjct: 549 *RFHQQLQSHAASLLGSGRRGG 614
Score = 188 bits (404), Expect(3) = 2e-052
Identities = 82/132 (62%), Positives = 94/132 (71%)
Frame = -2 / -3
Query: 607 TFEXXXXXXXXLHTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVA 428
TF+ +W+K LPKQVPLSALQ +FC Q *HF+VP LSFR+C +GILSIVA
Sbjct: 429 TFKLFLQLLQFFDAEWSKILPKQVPLSALQSFKFCFQL*HFMVPTLSFRKCIVGILSIVA 250
Query: 427 AMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLV 248
MLVPF*S CY ERDLGVAE+G+LVGLLE+AVAALGEGDL VDLV
Sbjct: 249 TMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALGEGDLPVDLV 70
Query: 247 LDPLELNSTPPH 212
LD L+LNS+PPH
Sbjct: 69 LDALQLNSSPPH 34
Score = 149 bits (321), Expect(2) = 4e-036
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +3 / +2
Query: 396 *QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNLAH*VXX 575
*Q+L*KGTNI ATMLKIP H LKLR GT KCQ+* QN + CSAL+GTCLGR L H
Sbjct: 218 *QRL*KGTNIVATMLKIPTMHFLKLRVGTMKCQS*KQNLKLCSALKGTCLGRILDHSASK 397
Query: 576 XXXXXXXXXXVLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATTEPC 755
V HR+DRER N *W++W++ AERS +W K GNS+TS +LKV T
Sbjct: 398 NCSSWRNSLNVHYHRRDRERRN**WNRWRNFAERSVSWVKLIGNSSTSSRLKVPPATTEP 577
Query: 756 SMQPGQLPAAPW 791
+P L A W
Sbjct: 578 CSKPPGLRAPWW 613
Score = 105 bits (223), Expect(3) = 2e-025
Identities = 49/71 (69%), Positives = 55/71 (77%)
Frame = -1 / -2
Query: 608 HIRAVSLAAATPSHSVGQVPPQASASECAARPRILPSVLTFPGTSSEFQRVRHWNLEHCS 429
HI+AVS AAA V Q PPQASA ECAA+ +IL S LTF GT+SEFQ+V WNLEHCS
Sbjct: 430 HIQAVSPAAAIL*R*VVQDPPQASAFECAAKLQILLSTLTFHGTNSEFQKVHCWNLEHCS 251
Query: 428 SNVGTFLKFLL 396
+NVGTFLK LL
Sbjct: 250 NNVGTFLKSLL 218
Score = 38.6 bits (78), Expect(3) = 2e-052
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / -3
Query: 790 HGAAGSWPGCMLQGSVVATTFSFKLVFELPVHFSQVSLLSAE 665
H A S G + V TF+ +LV ELP++F+Q++LLSA+
Sbjct: 612 HHGALSPGGLLHGSVVAGGTFNLELVLELPINFTQLTLLSAK 487
Score = 35.9 bits (72), Expect(4) = e-117
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 948 RTTSCWDGFFEL 983
RTTSCWDGFFEL
Sbjct: 755 RTTSCWDGFFEL 790
Score = 35.4 bits (71), Expect(3) = 3e-070
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 932 SPPGGENNFMLGWVL* 979
+P G ENNFMLGWVL*
Sbjct: 739 APAGAENNFMLGWVL* 786
Score = 34.1 bits (68), Expect(4) = e-117
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 839 SVAMDCEPTLQIGYP 883
S AMD EPTLQIGYP
Sbjct: 649 SAAMDSEPTLQIGYP 693
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / -2
Query: 737 YNLQLQACV*VACSFLPGVAPFC 669
+NLQ +AC *VA F P APFC
Sbjct: 559 WNLQPRACA*VAY*FHPADAPFC 491
Score = 32.2 bits (64), Expect(3) = 8e-082
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 978 QRTHPSMKLFSPP 940
QRTHPSMKLFS P
Sbjct: 785 QRTHPSMKLFSAP 747
Score = 31.3 bits (62), Expect(3) = 8e-082
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -3 / -1
Query: 882 GYPICRVGSQSIATD 838
GYPIC+VGS+S+A +
Sbjct: 692 GYPICKVGSESMAAE 648
Score = 30.4 bits (60), Expect(2) = 4e-036
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 946 REQLHAGMGSLS 981
REQLHAGMGSLS
Sbjct: 753 REQLHAGMGSLS 788
Score = 29.5 bits (58), Expect(3) = 2e-052
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 982 NSKNPSQHEVVLAS 941
+SKNPSQHEVVL +
Sbjct: 789 SSKNPSQHEVVLCT 748
Score = 27.6 bits (54), Expect(3) = 2e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 980 LKEPIPA*SCS 948
LKEPIPA*SCS
Sbjct: 787 LKEPIPA*SCS 755
Score = 25.8 bits (50), Expect(3) = 3e-070
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3 / +2
Query: 849 WTVNPLCKSGTLL 887
WT+NP CK G L+
Sbjct: 659 WTLNPPCKLGILI 697
Score = 23.1 bits (44), Expect(4) = e-117
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2 / +1
Query: 890 HQFLPSEAANNIPRSPPGGENN 955
HQF+P+EA + P G N
Sbjct: 694 HQFVPAEANTIQRSTAPAGAEN 759
>gb|BP185086.1|BP185086 BP185086 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone pNS-YP13, mRNA
sequence
Length = 670
Score = 392 bits (850), Expect = e-107
Identities = 167/177 (94%), Positives = 172/177 (97%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 115 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 294
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
GITKTLERYQHCCYNAQDSN ALSETQSWY EMSKL+AKFEALQRTQRHLLGE+LGPLSV
Sbjct: 295 GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSV 474
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKER LGE+NRQLKHKLE EG ++
Sbjct: 475 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTS 645
Score = 279 bits (604), Expect = 5e-073
Identities = 130/186 (69%), Positives = 137/186 (73%)
Frame = -3 / -3
Query: 765 AACCRVL*LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXX 586
A C + L++PS SSLCLSCL ISP RSFLRSSSTCSIISCVFLCLACD AH
Sbjct: 668 ACCMAL*LLVEPSTSSLCLSCLLISPS*RSFLRSSSTCSIISCVFLCLACDSAHSSCFSS 489
Query: 585 XXXXFTLXXXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESAPLES*AL*QQCWYLSK 406
TL SKCL*VRCKASNFA +FDISWYQL VSESA LES*AL*QQCWYLSK
Sbjct: 488 CCNSLTLSGPRSSPSKCL*VRCKASNFAFNFDISWYQLWVSESALLES*AL*QQCWYLSK 309
Query: 405 VFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLILFSIRLSST 226
VFVMPALPNS*SLPRLEKMM AFL RPLRRLEKVT LILFS+R SST
Sbjct: 308 VFVMPALPNS*SLPRLEKMMSATSASQRTDSS*AFLRRPLRRLEKVTCLLILFSMRFSST 129
Query: 225 RPLPMA 208
PLP++
Sbjct: 128 LPLPIS 111
Score = 243 bits (525), Expect = 4e-062
Identities = 116/193 (60%), Positives = 128/193 (66%)
Frame = +1 / +3
Query: 187 GKLEIVRRHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPR 366
G + + R GEG S*A+A REQDQ GHLLQAPQRP QE QPR
Sbjct: 90 GIVRSIGRDGEGKS*AEAHREQDQQAGHLLQAPQRPPQEGLRAVRSLRRRGRAHHLLQPR 269
Query: 367 QALRVRQRRHNKNFRKVPTLLLQCSRFQWRTL*NSELVPGNVKTEGKIRGLAAHSEALAW 546
QALRVRQRRHNK+FRKVPTLLLQCSRFQ T *N ELVP NVK E KI AAHS+ALAW
Sbjct: 270 QALRVRQRRHNKDFRKVPTLLLQCSRFQQCTF*NPELVP*NVKVESKI*SFAAHSKALAW 449
Query: 547 GGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQATQTQA*S 726
GG+W T+ + +AAA ETA MC +TG+TEKD T DG SG QKGA+ G N ATQ QA
Sbjct: 450 GGSWTTQRQRIAAAGETA*MCTITGETEKDATDDGTSGGTSQKGASAG*N**ATQAQARG 629
Query: 727 *RL*QLQNPAACS 765
*R Q A S
Sbjct: 630 *RFHQQLQSHAAS 668
Score = 186 bits (400), Expect(2) = 7e-050
Identities = 81/132 (61%), Positives = 93/132 (70%)
Frame = -2 / -2
Query: 607 TFEXXXXXXXXLHTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSFRECAIGILSIVA 428
TF+ +W+K LPKQVPLSALQ +FC Q *HF+VP L FR+C +GILSIVA
Sbjct: 510 TFKLFLQLLQFFDAEWSKILPKQVPLSALQSFKFCFQL*HFMVPTLGFRKCIVGILSIVA 331
Query: 427 AMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDLAVDLV 248
MLVPF*S CY ERDLGVAE+G+LVGLLE+AVAALGEGDL VDLV
Sbjct: 330 TMLVPF*SLCYAGAAELVELAAAGEDDERDLGVAENGQLVGLLEEAVAALGEGDLPVDLV 151
Query: 247 LDPLELNSTPPH 212
LD L+LNS+PPH
Sbjct: 150 LDALQLNSSPPH 115
Score = 144 bits (309), Expect = 2e-032
Identities = 68/124 (54%), Positives = 80/124 (64%)
Frame = +3 / +2
Query: 396 *QKL*KGTNIAATMLKIPMAHSLKLRAGTRKCQN*GQNSRPCSALRGTCLGRNLAH*VXX 575
*Q+L*KGTNI ATMLKIP H LK R GT KCQ+* QN + CSAL+GTCLGR L H
Sbjct: 299 *QRL*KGTNIVATMLKIPTMHFLKPRVGTMKCQS*KQNLKLCSALKGTCLGRILDHSASK 478
Query: 576 XXXXXXXXXXVLCHRQDRERHNL*WSKWKSSAERSDTWEK*TGNSNTSLKLKVVATTEPC 755
V HR+DRER N *W+KW++ AERS +W K GNS+TS +LKV T
Sbjct: 479 NCSSWRNSLNVHYHRRDRERRN**WNKWRNFAERSVSWVKLIGNSSTSSRLKVPPATTEP 658
Query: 756 SMQP 767
+P
Sbjct: 659 CSKP 670
Score = 101 bits (216), Expect(2) = 2e-023
Identities = 48/71 (67%), Positives = 54/71 (76%)
Frame = -1 / -1
Query: 608 HIRAVSLAAATPSHSVGQVPPQASASECAARPRILPSVLTFPGTSSEFQRVRHWNLEHCS 429
HI+AVS AAA V Q PPQASA ECAA+ +IL S LTF GT+S FQ+V WNLEHCS
Sbjct: 511 HIQAVSPAAAIL*R*VVQDPPQASAFECAAKLQILLSTLTFHGTNSGFQKVHCWNLEHCS 332
Query: 428 SNVGTFLKFLL 396
+NVGTFLK LL
Sbjct: 331 NNVGTFLKSLL 299
Score = 36.8 bits (74), Expect(2) = 7e-050
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 745 VVATTFSFKLVFELPVHFSQVSLLSAE 665
V TF+ +LV ELP++F+Q++LLSA+
Sbjct: 648 VAGGTFNLELVLELPINFTQLTLLSAK 568
Score = 32.2 bits (64), Expect(2) = 2e-023
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / -1
Query: 737 YNLQLQACV*VACSFLPGVAPFC 669
+NLQ +AC *VA F P APFC
Sbjct: 640 WNLQPRACA*VAY*FHPADAPFC 572
>gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS213
mRNA, complete cds
Length = 1134
Score = 182 bits (391), Expect(4) = 7e-094
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 138 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 317
Query: 392 GITKTLERYQHCCYNAQDSNGALS 463
GI KTLE+Y CCYNAQ SN AL+
Sbjct: 318 GINKTLEKYNSCCYNAQGSNSALA 389
Score = 171 bits (369), Expect(4) = 7e-094
Identities = 71/93 (76%), Positives = 85/93 (91%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E QSWYQEMS+L+ K E LQR+QRH+LGE+LGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 396 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 575
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
MMEQV++LRRKER LGE+N+QLK+KLEAE S+
Sbjct: 576 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 674
Score = 106 bits (226), Expect(3) = 7e-047
Identities = 52/83 (62%), Positives = 56/83 (67%)
Frame = -3 / -3
Query: 456 APLES*AL*QQCWYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRL 277
A E *AL*QQ Y S V +PALPNS SLPRLEKMM AFL RPLRRL
Sbjct: 382 ALFEP*AL*QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRL 203
Query: 276 EKVTWRLILFSIRLSSTRPLPMA 208
EKVT RLILFS+R SST PLP++
Sbjct: 202 EKVTCRLILFSMRFSSTLPLPIS 134
Score = 94.5 bits (200), Expect(3) = 7e-047
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -3
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL SASSL SCL SP RSF R SSTCSI+ CVF C ACD + F L
Sbjct: 673 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 494
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESA 454
S CL* R + S+ LS DISWYQL* S A
Sbjct: 493 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL*CSPPA 386
Score = 88.6 bits (187), Expect(3) = 1e-024
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -2 / -2
Query: 442 LSIVAAMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 263
LS+V A +V F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 368 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 189
Query: 262 AVDLVLDPLELNSTPPH 212
VDLVLD L+LN +PPH
Sbjct: 188 PVDLVLDALQLNPSPPH 138
Score = 87.7 bits (185), Expect(2) = 5e-028
Identities = 42/81 (51%), Positives = 49/81 (60%)
Frame = +1 / +2
Query: 208 RHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQ 387
R GEG *A+A REQDQP GHLLQAPQRP QE QP QA+R+R
Sbjct: 134 RDGEGKG*AEAHREQDQPAGHLLQAPQRPPQEGVRALRALRRGGGAHHLLQPWQAVRIR* 313
Query: 388 RRHNKNFRKVPTLLLQCSRFQ 450
RR+ ++ KV LLLQ SRF+
Sbjct: 314 RRNKQDIGKVQ*LLLQRSRFK 376
Score = 62.0 bits (129), Expect(2) = 5e-028
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +1 / +2
Query: 529 SEALAWGGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQAT 708
SEA AW +W E +G AAA E + VTG T KDT +DGA R+ +G R + AT
Sbjct: 461 SEAHAW*RSWTIEHKGTAAAGEAT*VLTVTGSTTKDTNHDGAGRRSSPEGTPAWRAQ*AT 640
Query: 709 QTQA*S*RL*Q 741
+ QA S* *Q
Sbjct: 641 EKQARS*SR*Q 673
Score = 40.5 bits (82), Expect(3) = 1e-024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / -2
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSF 464
+ QW+K K VPL AL+ + + *H LVPAL F
Sbjct: 503 YAQWSKIFTKHVPLRALETFKLSLEP*HLLVPALMF 396
Score = 30.4 bits (60), Expect(3) = 7e-047
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 879 YPICRVGSQSIA 844
YPICRVGSQSI+
Sbjct: 793 YPICRVGSQSIS 758
Score = 29.9 bits (59), Expect(4) = 7e-094
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 848 MDCEPTLQIGY 880
+DCEPTLQIGY
Sbjct: 762 IDCEPTLQIGY 794
Score = 27.2 bits (53), Expect(3) = 1e-024
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 748 SVVATTFSFKLVFELPVHFSQVSLLSAE 665
+V A FSF LVF+L + S+++ L A+
Sbjct: 680 AVAAIGFSF*LVFQLLIELSKLAFLPAK 597
Score = 24.0 bits (46), Expect(4) = 7e-094
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 950 NNFMLGWVL*VALLII 997
NNF++GW L* L+I
Sbjct: 858 NNFVMGWPL*SPSLLI 905
>dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057B01, full
insert sequence
Length = 963
Score = 182 bits (391), Expect(4) = 7e-094
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 32 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 211
Query: 392 GITKTLERYQHCCYNAQDSNGALS 463
GI KTLE+Y CCYNAQ SN AL+
Sbjct: 212 GINKTLEKYNSCCYNAQGSNSALA 283
Score = 171 bits (369), Expect(4) = 7e-094
Identities = 71/93 (76%), Positives = 85/93 (91%)
Frame = +2 / +2
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E QSWYQEMS+L+ K E LQR+QRH+LGE+LGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 290 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 469
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
MMEQV++LRRKER LGE+N+QLK+KLEAE S+
Sbjct: 470 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 568
Score = 106 bits (226), Expect(3) = 7e-047
Identities = 52/83 (62%), Positives = 56/83 (67%)
Frame = -3 / -1
Query: 456 APLES*AL*QQCWYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRL 277
A E *AL*QQ Y S V +PALPNS SLPRLEKMM AFL RPLRRL
Sbjct: 276 ALFEP*AL*QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRL 97
Query: 276 EKVTWRLILFSIRLSSTRPLPMA 208
EKVT RLILFS+R SST PLP++
Sbjct: 96 EKVTCRLILFSMRFSSTLPLPIS 28
Score = 94.5 bits (200), Expect(3) = 7e-047
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -1
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL SASSL SCL SP RSF R SSTCSI+ CVF C ACD + F L
Sbjct: 567 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 388
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESA 454
S CL* R + S+ LS DISWYQL* S A
Sbjct: 387 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL*CSPPA 280
Score = 88.6 bits (187), Expect(3) = 1e-024
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -2 / -3
Query: 442 LSIVAAMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 263
LS+V A +V F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 262 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 83
Query: 262 AVDLVLDPLELNSTPPH 212
VDLVLD L+LN +PPH
Sbjct: 82 PVDLVLDALQLNPSPPH 32
Score = 87.7 bits (185), Expect(2) = 5e-028
Identities = 42/81 (51%), Positives = 49/81 (60%)
Frame = +1 / +1
Query: 208 RHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQ 387
R GEG *A+A REQDQP GHLLQAPQRP QE QP QA+R+R
Sbjct: 28 RDGEGKG*AEAHREQDQPAGHLLQAPQRPPQEGVRALRALRRGGGAHHLLQPWQAVRIR* 207
Query: 388 RRHNKNFRKVPTLLLQCSRFQ 450
RR+ ++ KV LLLQ SRF+
Sbjct: 208 RRNKQDIGKVQ*LLLQRSRFK 270
Score = 62.0 bits (129), Expect(2) = 5e-028
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +1 / +1
Query: 529 SEALAWGGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQAT 708
SEA AW +W E +G AAA E + VTG T KDT +DGA R+ +G R + AT
Sbjct: 355 SEAHAW*RSWTIEHKGTAAAGEAT*VLTVTGSTTKDTNHDGAGRRSSPEGTPAWRAQ*AT 534
Query: 709 QTQA*S*RL*Q 741
+ QA S* *Q
Sbjct: 535 EKQARS*SR*Q 567
Score = 40.5 bits (82), Expect(3) = 1e-024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / -3
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSF 464
+ QW+K K VPL AL+ + + *H LVPAL F
Sbjct: 397 YAQWSKIFTKHVPLRALETFKLSLEP*HLLVPALMF 290
Score = 30.4 bits (60), Expect(3) = 7e-047
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 879 YPICRVGSQSIA 844
YPICRVGSQSI+
Sbjct: 687 YPICRVGSQSIS 652
Score = 29.9 bits (59), Expect(4) = 7e-094
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 848 MDCEPTLQIGY 880
+DCEPTLQIGY
Sbjct: 656 IDCEPTLQIGY 688
Score = 27.2 bits (53), Expect(3) = 1e-024
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 748 SVVATTFSFKLVFELPVHFSQVSLLSAE 665
+V A FSF LVF+L + S+++ L A+
Sbjct: 574 AVAAIGFSF*LVFQLLIELSKLAFLPAK 491
Score = 24.0 bits (46), Expect(4) = 7e-094
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 950 NNFMLGWVL*VALLII 997
NNF++GW L* L+I
Sbjct: 752 NNFVMGWPL*SPSLLI 799
>ref|XM_473638.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 750
Score = 182 bits (391), Expect(3) = 3e-092
Identities = 77/84 (91%), Positives = 79/84 (94%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 180
Query: 392 GITKTLERYQHCCYNAQDSNGALS 463
GI KTLE+Y CCYNAQ SN AL+
Sbjct: 181 GINKTLEKYNSCCYNAQGSNSALA 252
Score = 171 bits (369), Expect(3) = 3e-092
Identities = 71/93 (76%), Positives = 85/93 (91%)
Frame = +2 / +1
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E QSWYQEMS+L+ K E LQR+QRH+LGE+LGPLS+KELQQLEKQLE +LSQARQRKTQ+
Sbjct: 259 EHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQI 438
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
MMEQV++LRRKER LGE+N+QLK+KLEAE S+
Sbjct: 439 MMEQVDDLRRKERQLGELNKQLKNKLEAEADSS 537
Score = 105 bits (224), Expect(3) = 1e-046
Identities = 52/81 (64%), Positives = 54/81 (66%)
Frame = -3 / -2
Query: 456 APLES*AL*QQCWYLSKVFVMPALPNS*SLPRLEKMMXXXXXXXXXXXXXAFLSRPLRRL 277
A E *AL*QQ Y S V +PALPNS SLPRLEKMM AFL RPLRRL
Sbjct: 245 ALFEP*AL*QQLLYFSNVLFIPALPNSYSLPRLEKMMSATSASQSTESSYAFLRRPLRRL 66
Query: 276 EKVTWRLILFSIRLSSTRPLP 214
EKVT RLILFS+R SST PLP
Sbjct: 65 EKVTCRLILFSMRFSSTLPLP 3
Score = 94.5 bits (200), Expect(3) = 1e-046
Identities = 49/96 (51%), Positives = 53/96 (55%)
Frame = -3 / -2
Query: 741 LLQPSASSLCLSCLFISPRCRSFLRSSSTCSIISCVFLCLACDKAHXXXXXXXXXXFTLX 562
LL SASSL SCL SP RSF R SSTCSI+ CVF C ACD + F L
Sbjct: 536 LLSASASSLFFSCLLSSPSWRSFRRRSSTCSIMICVFRCRACDSEYSSCFSSCCSSFMLN 357
Query: 561 XXXXXXSKCL*VRCKASNFALSFDISWYQL*VSESA 454
S CL* R + S+ LS DISWYQL* S A
Sbjct: 356 GPRSSPSMCL*ERWRHSSLVLSLDISWYQL*CSPPA 249
Score = 88.6 bits (187), Expect(3) = 1e-024
Identities = 43/77 (55%), Positives = 48/77 (62%)
Frame = -2 / -1
Query: 442 LSIVAAMLVPF*SFCYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGEGDL 263
LS+V A +V F Y ER L VAEHGELV LLE+AVAALGEGDL
Sbjct: 231 LSVVTATIVLFQCLVYSGATEFVQLATAGEDDERHLRVAEHGELVRLLEEAVAALGEGDL 52
Query: 262 AVDLVLDPLELNSTPPH 212
VDLVLD L+LN +PPH
Sbjct: 51 PVDLVLDALQLNPSPPH 1
Score = 85.8 bits (181), Expect(4) = 4e-028
Identities = 41/79 (51%), Positives = 48/79 (60%)
Frame = +1 / +3
Query: 214 GEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPRQALRVRQRR 393
GEG *A+A REQDQP GHLLQAPQRP QE QP QA+R+R RR
Sbjct: 3 GEGKG*AEAHREQDQPAGHLLQAPQRPPQEGVRALRALRRGGGAHHLLQPWQAVRIR*RR 182
Query: 394 HNKNFRKVPTLLLQCSRFQ 450
+ ++ KV LLLQ SRF+
Sbjct: 183 NKQDIGKVQ*LLLQRSRFK 239
Score = 62.0 bits (129), Expect(4) = 4e-028
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +1 / +3
Query: 529 SEALAWGGTWPTECEGVAAARETARMCFVTGKTEKDTTYDGASGRAPQKGATPGRNEQAT 708
SEA AW +W E +G AAA E + VTG T KDT +DGA R+ +G R + AT
Sbjct: 324 SEAHAW*RSWTIEHKGTAAAGEAT*VLTVTGSTTKDTNHDGAGRRSSPEGTPAWRAQ*AT 503
Query: 709 QTQA*S*RL*Q 741
+ QA S* *Q
Sbjct: 504 EKQARS*SR*Q 536
Score = 40.5 bits (82), Expect(3) = 1e-024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -2 / -1
Query: 571 HTQWAKFLPKQVPLSALQGLEFCPQF*HFLVPALSF 464
+ QW+K K VPL AL+ + + *H LVPAL F
Sbjct: 366 YAQWSKIFTKHVPLRALETFKLSLEP*HLLVPALMF 259
Score = 30.4 bits (60), Expect(3) = 1e-046
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -2
Query: 879 YPICRVGSQSIA 844
YPICRVGSQSI+
Sbjct: 656 YPICRVGSQSIS 621
Score = 29.9 bits (59), Expect(3) = 3e-092
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 848 MDCEPTLQIGY 880
+DCEPTLQIGY
Sbjct: 625 IDCEPTLQIGY 657
Score = 27.2 bits (53), Expect(3) = 1e-024
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 748 SVVATTFSFKLVFELPVHFSQVSLLSAE 665
+V A FSF LVF+L + S+++ L A+
Sbjct: 543 AVAAIGFSF*LVFQLLIELSKLAFLPAK 460
Score = 21.7 bits (41), Expect(4) = 4e-028
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 950 NNFMLGWVL* 979
NNF++GW L*
Sbjct: 721 NNFVMGWPL* 750
Score = 21.7 bits (41), Expect(4) = 4e-028
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2 / +1
Query: 887 HHQFLPSEAANNIPRSPPGGENN 955
++QF+ EAAN G +NN
Sbjct: 655 YYQFVRPEAANPRSNGGGGDQNN 723
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1123_G04
Length = 124666
Score = 141 bits (302), Expect(6) = 1e-069
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 22056 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 22235
Query: 392 G 394
G
Sbjct: 22236 G 22238
Score = 89.0 bits (188), Expect(8) = 5e-040
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -2 / -3
Query: 343 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLELNSTPPH 212
RDLGVAE+G+LVGLLE+AVAALGEGDL VDLVLD L+LNS+PPH
Sbjct: 22187 RDLGVAENGQLVGLLEEAVAALGEGDLPVDLVLDALQLNSSPPH 22056
Score = 80.8 bits (170), Expect(6) = 7e-036
Identities = 38/69 (55%), Positives = 41/69 (59%)
Frame = +1 / +2
Query: 187 GKLEIVRRHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPR 366
G + + R GEG S*A+A REQDQ GHLLQAPQRP QE QPR
Sbjct: 22031 GIVRSIGRDGEGKS*AEAHREQDQQAGHLLQAPQRPPQEGLRAVRSLRRRGRAHHLLQPR 22210
Query: 367 QALRVRQRR 393
QALRVRQRR
Sbjct: 22211 QALRVRQRR 22237
Score = 78.5 bits (165), Expect(6) = 1e-069
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2 / +2
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RHLLGE+LGPLSVKELQQLEKQLECALSQARQRK
Sbjct: 27302 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 27403
Score = 65.2 bits (136), Expect(6) = 1e-069
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQ 472
ITKTLERYQHCCYNAQDSN ALSETQ
Sbjct: 24997 ITKTLERYQHCCYNAQDSNNALSETQ 25074
Score = 57.4 bits (119), Expect(6) = 7e-036
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 514 GLAAHSEALAWGGTWPTECEGVAAARETARMCFVTGKTEK 633
G A +ALAWGG+W T+ + +AAA ETA MC +TG+TEK
Sbjct: 27283 GFA*FLKALAWGGSWTTQRQRIAAAGETA*MCTITGETEK 27402
Score = 53.3 bits (110), Expect(8) = 5e-040
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -3
Query: 468 VSESAPLES*AL*QQCWYLSKVFVM 394
VSESA LES*AL*QQCWYLSKVFVM
Sbjct: 25070 VSESALLES*AL*QQCWYLSKVFVM 24996
Score = 51.5 bits (106), Expect(6) = 7e-036
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / +3
Query: 391 RHNKNFRKVPTLLLQCSRFQWRTL*N 468
+HNK+FRKVPTLLLQCSRFQ T *N
Sbjct: 24993 QHNKDFRKVPTLLLQCSRFQQCTF*N 25070
Score = 50.1 bits (103), Expect(8) = 5e-040
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / -2
Query: 540 KCL*VRCKASNFALSFDISWYQL 472
K L*VRCKASNFA +FDISWYQL
Sbjct: 27078 KYL*VRCKASNFAFNFDISWYQL 27010
Score = 50.1 bits (103), Expect(6) = 1e-069
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2 / +2
Query: 470 QSWYQEMSKLRAKFEALQRTQRH 538
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 27008 KSWYHEMSKLKAKFEALQRTQRY 27076
Score = 35.9 bits (72), Expect(6) = 1e-069
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 948 RTTSCWDGFFEL 983
RTTSCWDGFFEL
Sbjct: 29612 RTTSCWDGFFEL 29647
Score = 35.4 bits (71), Expect(8) = 5e-040
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3 / -3
Query: 678 SFLRSSSTCSIISCV 634
+FLRSSSTCSIISCV
Sbjct: 28775 TFLRSSSTCSIISCV 28731
Score = 35.4 bits (71), Expect(6) = 7e-036
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 932 SPPGGENNFMLGWVL* 979
+P G ENNFMLGWVL*
Sbjct: 29596 APAGAENNFMLGWVL* 29643
Score = 35.0 bits (70), Expect(6) = 1e-069
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 632 KTQLMMEQVEELRRKERHLGEMNR 703
+TQLMMEQVEELRRK + ++++
Sbjct: 28729 QTQLMMEQVEELRRKVHYQSKVSQ 28800
Score = 34.1 bits (68), Expect(8) = 5e-040
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -3 / -2
Query: 633 FLCLACDKAHXXXXXXXXXXFTLXXXXXXXSKCL*VRCK 517
FLCLACD AH TL SKCL* K
Sbjct: 27402 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 27286
Score = 33.1 bits (66), Expect(6) = 7e-036
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / +1
Query: 674 KERHLGEMNRQLKHKL 721
+ER LGE+NRQLKHK+
Sbjct: 29080 QERQLGEINRQLKHKV 29127
Score = 32.2 bits (64), Expect(8) = 5e-040
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 978 QRTHPSMKLFSPP 940
QRTHPSMKLFS P
Sbjct: 29642 QRTHPSMKLFSAP 29604
Score = 31.3 bits (62), Expect(6) = 7e-036
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 472 ELVPGNVKTEGKIRGLAAHSE 534
ELVP NVK E KI AAHS+
Sbjct: 27010 ELVP*NVKVESKI*SFAAHSK 27072
Score = 28.6 bits (56), Expect(8) = 5e-040
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -3 / -2
Query: 879 YPICRVGSQSIATD 838
YPIC+VGS+S+A +
Sbjct: 29370 YPICKVGSESMAAE 29329
Score = 28.1 bits (55), Expect(8) = 5e-040
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3 / -3
Query: 759 CCRVL*LLQPSASSLCLSCLFISPRCRS 676
C + * + +LCLSCL ISP RS
Sbjct: 29165 CTALA*QISE*IRTLCLSCLLISPS*RS 29082
>gb|AACV01010373.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010373, whole
genome shotgun sequence
Length = 17272
Score = 141 bits (302), Expect(7) = 3e-061
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / -2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 15066 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 14887
Query: 392 G 394
G
Sbjct: 14886 G 14884
Score = 70.7 bits (148), Expect(7) = 3e-061
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / -1
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RH+LGE+LGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 12313 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 12212
Score = 43.7 bits (89), Expect(7) = 3e-061
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 395 ITKTLERYQHCCYNAQDSNGALS 463
I KTLE+Y CCYNAQ SN AL+
Sbjct: 12945 INKTLEKYNSCCYNAQGSNSALA 12877
Score = 42.3 bits (86), Expect(7) = 3e-061
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / -3
Query: 473 SWYQEMSKLRAKFEALQRTQRH 538
SWYQEMS+L+ K E LQR+QR+
Sbjct: 12458 SWYQEMSRLKTKLECLQRSQRY 12393
Score = 30.4 bits (60), Expect(7) = 3e-061
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2 / -1
Query: 632 KTQLMMEQVEELRRK 676
+TQ+MMEQV++LRRK
Sbjct: 11512 QTQIMMEQVDDLRRK 11468
Score = 29.0 bits (57), Expect(7) = 3e-061
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 674 KERHLGEMNRQLKHKL 721
+ER LGE+N+QLK+K+
Sbjct: 10110 QERQLGELNKQLKNKV 10063
Score = 26.7 bits (52), Expect(7) = 3e-061
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 848 MDCEPTLQIG 877
+DCEPTLQIG
Sbjct: 9795 IDCEPTLQIG 9766
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 141 bits (302), Expect(6) = 1e-060
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 3059603 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 3059782
Query: 392 G 394
G
Sbjct: 3059783 G 3059785
Score = 106 bits (227), Expect(2) = 7e-022
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG++ ++RI+N +RQVTFSKRRNGLLKKA ELS+LCDAEV L++FSS G+LYEF S
Sbjct: 5640492 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSS 5640668
Score = 89.0 bits (188), Expect(5) = 7e-028
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -2 / -2
Query: 343 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLELNSTPPH 212
RDLGVAE+G+LVGLLE+AVAALGEGDL VDLVLD L+LNS+PPH
Sbjct: 3059734 RDLGVAENGQLVGLLEEAVAALGEGDLPVDLVLDALQLNSSPPH 3059603
Score = 80.8 bits (170), Expect(4) = 4e-026
Identities = 38/69 (55%), Positives = 41/69 (59%)
Frame = +1 / +1
Query: 187 GKLEIVRRHGEGSS*AQADREQDQPPGHLLQAPQRPAQEXXXXXXXXXXXXXXXXXXQPR 366
G + + R GEG S*A+A REQDQ GHLLQAPQRP QE QPR
Sbjct: 3059578 GIVRSIGRDGEGKS*AEAHREQDQQAGHLLQAPQRPPQEGLRAVRSLRRRGRAHHLLQPR 3059757
Query: 367 QALRVRQRR 393
QALRVRQRR
Sbjct: 3059758 QALRVRQRR 3059784
Score = 78.5 bits (165), Expect(6) = 1e-060
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2 / +1
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RHLLGE+LGPLSVKELQQLEKQLECALSQARQRK
Sbjct: 3064849 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 3064950
Score = 65.2 bits (136), Expect(6) = 1e-060
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQ 472
ITKTLERYQHCCYNAQDSN ALSETQ
Sbjct: 3062544 ITKTLERYQHCCYNAQDSNNALSETQ 3062621
Score = 57.4 bits (119), Expect(4) = 4e-026
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1 / +3
Query: 514 GLAAHSEALAWGGTWPTECEGVAAARETARMCFVTGKTEK 633
G A +ALAWGG+W T+ + +AAA ETA MC +TG+TEK
Sbjct: 3064830 GFA*FLKALAWGGSWTTQRQRIAAAGETA*MCTITGETEK 3064949
Score = 53.3 bits (110), Expect(5) = 7e-028
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / -2
Query: 468 VSESAPLES*AL*QQCWYLSKVFVM 394
VSESA LES*AL*QQCWYLSKVFVM
Sbjct: 3062617 VSESALLES*AL*QQCWYLSKVFVM 3062543
Score = 51.5 bits (106), Expect(4) = 4e-026
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / +2
Query: 391 RHNKNFRKVPTLLLQCSRFQWRTL*N 468
+HNK+FRKVPTLLLQCSRFQ T *N
Sbjct: 3062540 QHNKDFRKVPTLLLQCSRFQQCTF*N 3062617
Score = 50.1 bits (103), Expect(5) = 7e-028
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / -1
Query: 540 KCL*VRCKASNFALSFDISWYQL 472
K L*VRCKASNFA +FDISWYQL
Sbjct: 3064625 KYL*VRCKASNFAFNFDISWYQL 3064557
Score = 50.1 bits (103), Expect(6) = 1e-060
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRH 538
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 3064555 KSWYHEMSKLKAKFEALQRTQRY 3064623
Score = 38.6 bits (78), Expect(2) = 7e-022
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2 / +1
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
R + GEEL LS+ ELQQLEK LE L + K
Sbjct: 7225990 RQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTK 7226091
Score = 35.9 bits (72), Expect(6) = 1e-060
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 948 RTTSCWDGFFEL 983
RTTSCWDGFFEL
Sbjct: 3067159 RTTSCWDGFFEL 3067194
Score = 35.4 bits (71), Expect(5) = 7e-028
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3 / -2
Query: 678 SFLRSSSTCSIISCV 634
+FLRSSSTCSIISCV
Sbjct: 3066322 TFLRSSSTCSIISCV 3066278
Score = 35.4 bits (71), Expect(4) = 4e-026
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 932 SPPGGENNFMLGWVL* 979
+P G ENNFMLGWVL*
Sbjct: 3067143 APAGAENNFMLGWVL* 3067190
Score = 35.0 bits (70), Expect(6) = 1e-060
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / +3
Query: 632 KTQLMMEQVEELRRKERHLGEMNR 703
+TQLMMEQVEELRRK + ++++
Sbjct: 3066276 QTQLMMEQVEELRRKVHYQSKVSQ 3066347
Score = 34.1 bits (68), Expect(5) = 7e-028
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -3 / -1
Query: 633 FLCLACDKAHXXXXXXXXXXFTLXXXXXXXSKCL*VRCK 517
FLCLACD AH TL SKCL* K
Sbjct: 3064949 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 3064833
>dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143P16, full
insert sequence
Length = 1203
Score = 131 bits (280), Expect(4) = 4e-057
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 105 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 284
Query: 386 S 388
S
Sbjct: 285 S 287
Score = 103 bits (220), Expect(4) = 4e-057
Identities = 47/99 (47%), Positives = 68/99 (68%)
Frame = +2 / +3
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
QS E KL+A+ E LQRTQR+LLGE+LG L +KEL+QLEKQL+ +L R +TQ M+
Sbjct: 381 QSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHML 560
Query: 650 EQVEELRRKERHLGEMNRQLKHKLEAEGCSNYRTLQHAA 766
+Q+ +L+R+E+ L E N+ L+ KLE + + +H A
Sbjct: 561 DQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGA 677
Score = 24.9 bits (48), Expect(4) = 4e-057
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDS 448
+T+TLERYQ Y D+
Sbjct: 297 MTRTLERYQKFSYGGPDT 350
Score = 24.0 bits (46), Expect(4) = 4e-057
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +3
Query: 839 SVAMDCEPTLQIGYPP 886
S+ EPTLQIG+ P
Sbjct: 756 SLEAAAEPTLQIGFTP 803
>gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8) mRNA, complete cds
Length = 1179
Score = 131 bits (280), Expect(4) = 4e-057
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 103 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 282
Query: 386 S 388
S
Sbjct: 283 S 285
Score = 103 bits (220), Expect(4) = 4e-057
Identities = 47/99 (47%), Positives = 68/99 (68%)
Frame = +2 / +1
Query: 470 QSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMM 649
QS E KL+A+ E LQRTQR+LLGE+LG L +KEL+QLEKQL+ +L R +TQ M+
Sbjct: 379 QSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHML 558
Query: 650 EQVEELRRKERHLGEMNRQLKHKLEAEGCSNYRTLQHAA 766
+Q+ +L+R+E+ L E N+ L+ KLE + + +H A
Sbjct: 559 DQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGA 675
Score = 24.9 bits (48), Expect(4) = 4e-057
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCYNAQDS 448
+T+TLERYQ Y D+
Sbjct: 295 MTRTLERYQKFSYGGPDT 348
Score = 24.0 bits (46), Expect(4) = 4e-057
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 839 SVAMDCEPTLQIGYPP 886
S+ EPTLQIG+ P
Sbjct: 754 SLEAAAEPTLQIGFTP 801
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
complete sequence
Length = 149892
Score = 141 bits (302), Expect(6) = 4e-055
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 84618 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 84797
Query: 392 G 394
G
Sbjct: 84798 G 84800
Score = 70.7 bits (148), Expect(6) = 4e-055
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +3
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RH+LGE+LGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 87381 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 87482
Score = 43.7 bits (89), Expect(6) = 4e-055
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCYNAQDSNGALS 463
I KTLE+Y CCYNAQ SN AL+
Sbjct: 86749 INKTLEKYNSCCYNAQGSNSALA 86817
Score = 42.3 bits (86), Expect(6) = 4e-055
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRH 538
SWYQEMS+L+ K E LQR+QR+
Sbjct: 87236 SWYQEMSRLKTKLECLQRSQRY 87301
Score = 30.4 bits (60), Expect(6) = 4e-055
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +2 / +1
Query: 632 KTQLMMEQVEELRRK 676
+TQ+MMEQV++LRRK
Sbjct: 88183 QTQIMMEQVDDLRRK 88227
Score = 29.0 bits (57), Expect(6) = 4e-055
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +2 / +2
Query: 674 KERHLGEMNRQLKHKL 721
+ER LGE+N+QLK+K+
Sbjct: 89585 QERQLGELNKQLKNKV 89632
>dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063L04, full
insert sequence
Length = 1055
Score = 131 bits (280), Expect(4) = 6e-055
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 61 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 240
Query: 386 S 388
S
Sbjct: 241 S 243
Score = 95.0 bits (201), Expect(4) = 6e-055
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 352 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 531
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+RKE+ + E NR L+ KLE
Sbjct: 532 LQRKEQMVSEANRCLRRKLE 591
Score = 30.9 bits (61), Expect(4) = 6e-055
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +1
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 724 EPTLQIGYPAEHHEAMNSACMNTYMPP 804
Score = 27.2 bits (53), Expect(4) = 6e-055
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 253 MTKTLEKYQKCSY 291
>ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1056
Score = 131 bits (280), Expect(4) = 6e-055
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +2
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 62 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 241
Query: 386 S 388
S
Sbjct: 242 S 244
Score = 95.0 bits (201), Expect(4) = 6e-055
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2 / +2
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 353 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 532
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+RKE+ + E NR L+ KLE
Sbjct: 533 LQRKEQMVSEANRCLRRKLE 592
Score = 30.9 bits (61), Expect(4) = 6e-055
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +2
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 725 EPTLQIGYPAEHHEAMNSACMNTYMPP 805
Score = 27.2 bits (53), Expect(4) = 6e-055
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 254 MTKTLEKYQKCSY 292
>gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) mRNA, complete cds
Length = 1078
Score = 131 bits (280), Expect(4) = 7e-055
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 93 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 272
Query: 386 S 388
S
Sbjct: 273 S 275
Score = 95.0 bits (201), Expect(4) = 7e-055
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2 / +3
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 384 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 563
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+RKE+ + E NR L+ KLE
Sbjct: 564 LQRKEQMVSEANRCLRRKLE 623
Score = 30.9 bits (61), Expect(4) = 7e-055
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +3
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 756 EPTLQIGYPAEHHEAMNSACMNTYMPP 836
Score = 27.2 bits (53), Expect(4) = 7e-055
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 285 MTKTLEKYQKCSY 323
>gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5) mRNA, complete cds
Length = 1027
Score = 123 bits (264), Expect(3) = 1e-054
Identities = 51/61 (83%), Positives = 60/61 (98%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG+L+EF +
Sbjct: 122 SMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 301
Query: 389 A 391
+
Sbjct: 302 S 304
Score = 107 bits (228), Expect(3) = 1e-054
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +2 / +2
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N+ +++ AL S YQE KL+ + E LQ TQR+LLGE+L PLS+KEL+QLE Q+E +L
Sbjct: 356 NSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISL 535
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
R K Q +++QV EL+RKE+ L + N+ LK K++ N
Sbjct: 536 MNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 664
Score = 26.3 bits (51), Expect(3) = 1e-054
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 386 SAGITKTLERYQHCCYN 436
S+ + KTLERY+ C YN
Sbjct: 302 SSCMYKTLERYRSCNYN 352
>dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B10, full
insert sequence
Length = 1022
Score = 123 bits (264), Expect(3) = 1e-054
Identities = 51/61 (83%), Positives = 60/61 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG+L+EF +
Sbjct: 135 SMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 314
Query: 389 A 391
+
Sbjct: 315 S 317
Score = 107 bits (228), Expect(3) = 1e-054
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +2 / +3
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N+ +++ AL S YQE KL+ + E LQ TQR+LLGE+L PLS+KEL+QLE Q+E +L
Sbjct: 369 NSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISL 548
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
R K Q +++QV EL+RKE+ L + N+ LK K++ N
Sbjct: 549 MNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 677
Score = 26.3 bits (51), Expect(3) = 1e-054
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYN 436
S+ + KTLERY+ C YN
Sbjct: 315 SSCMYKTLERYRSCNYN 365
>ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1022
Score = 123 bits (264), Expect(3) = 1e-054
Identities = 51/61 (83%), Positives = 60/61 (98%)
Frame = +2 / +3
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RG+L+EF +
Sbjct: 135 SMGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 314
Query: 389 A 391
+
Sbjct: 315 S 317
Score = 107 bits (228), Expect(3) = 1e-054
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +2 / +3
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N+ +++ AL S YQE KL+ + E LQ TQR+LLGE+L PLS+KEL+QLE Q+E +L
Sbjct: 369 NSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISL 548
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
R K Q +++QV EL+RKE+ L + N+ LK K++ N
Sbjct: 549 MNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGEN 677
Score = 26.3 bits (51), Expect(3) = 1e-054
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYN 436
S+ + KTLERY+ C YN
Sbjct: 315 SSCMYKTLERYRSCNYN 365
>emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein
Length = 1003
Score = 128 bits (274), Expect(4) = 9e-054
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 3 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 179
Score = 93.6 bits (198), Expect(4) = 9e-054
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +2 / +3
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ L R +T+ +++Q+ E
Sbjct: 288 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSYLKHVRTTRTKHLVDQLTE 467
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+RKE+ + E NR L+ KLE
Sbjct: 468 LQRKEQMVSEANRCLRRKLE 527
Score = 30.9 bits (61), Expect(4) = 9e-054
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +3
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 660 EPTLQIGYPAEHHEAMNSACMNTYMPP 740
Score = 27.2 bits (53), Expect(4) = 9e-054
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 189 MTKTLEKYQKCSY 227
>gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL6)
mRNA, complete cds
Length = 1025
Score = 129 bits (276), Expect(4) = 1e-053
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +2 / +1
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINR+VTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 43 IGMGRGRVELKRIENKINRRVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 222
Query: 386 S 388
S
Sbjct: 223 S 225
Score = 92.7 bits (196), Expect(4) = 1e-053
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 334 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 513
Query: 665 LRRKERHLGEMNRQLKHKLE 724
L+RKE+ E NR L+ KLE
Sbjct: 514 LQRKEQMGSEANRCLRRKLE 573
Score = 30.9 bits (61), Expect(4) = 1e-053
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +1
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 706 EPTLQIGYPAEHHEAMNSACMNTYMPP 786
Score = 27.2 bits (53), Expect(4) = 1e-053
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 235 MTKTLEKYQKCSY 273
>dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O08, full
insert sequence
Length = 1188
Score = 122 bits (262), Expect(2) = 3e-053
Identities = 51/60 (85%), Positives = 58/60 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 89 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 268
Score = 111 bits (237), Expect(2) = 3e-053
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2 / +2
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N + A E + YQE KL+ + E LQ TQR++LGE+LGPLS+KEL+QLE Q+E +L
Sbjct: 308 NYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSL 487
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
Q R RK Q +++Q+ +L+ KE+ L ++N+ L+ KL+ N
Sbjct: 488 KQVRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 616
>dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029M13, full
insert sequence
Length = 1152
Score = 122 bits (262), Expect(2) = 4e-053
Identities = 51/60 (85%), Positives = 58/60 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 93 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 272
Score = 111 bits (236), Expect(2) = 4e-053
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2 / +3
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N + A E + YQE KL+ + E LQ TQR++LGE+LGPLS+KEL+QLE Q+E +L
Sbjct: 312 NYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSL 491
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
Q R RK Q +++Q+ +L+ KE+ L ++N+ L+ KL+ N
Sbjct: 492 KQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 620
>gb|CF332154.1|CF332154 NACL--08-I21.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-I21, mRNA sequence
Length = 619
Score = 122 bits (262), Expect(2) = 4e-053
Identities = 51/60 (85%), Positives = 58/60 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG+VELKRIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF S+
Sbjct: 78 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 257
Score = 111 bits (236), Expect(2) = 4e-053
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2 / +3
Query: 434 NAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECAL 613
N + A E + YQE KL+ + E LQ TQR++LGE+LGPLS+KEL+QLE Q+E +L
Sbjct: 297 NYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSL 476
Query: 614 SQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKLEAEGCSN 742
Q R RK Q +++Q+ +L+ KE+ L ++N+ L+ KL+ N
Sbjct: 477 KQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAEN 605
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216
mRNA, complete cds
Length = 1265
Score = 131 bits (280), Expect(5) = 4e-051
Identities = 56/61 (91%), Positives = 59/61 (96%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF
Sbjct: 228 IGMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 407
Query: 386 S 388
S
Sbjct: 408 S 410
Score = 76.2 bits (160), Expect(5) = 4e-051
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +2 / +3
Query: 512 EALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLG 691
E L +R+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ EL+RKE+ +
Sbjct: 651 EKLCMYERNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVS 830
Query: 692 EMNRQLKHKLE 724
E NR L+ KLE
Sbjct: 831 EANRCLRRKLE 863
Score = 30.9 bits (61), Expect(5) = 4e-051
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2 / +3
Query: 857 EPTLQIGYPPHHQFLPSEAANNIPRSP 937
EPTLQIGYP H + A N P
Sbjct: 996 EPTLQIGYPAEHHEAMNSACMNTYMPP 1076
Score = 27.2 bits (53), Expect(5) = 4e-051
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 420 MTKTLEKYQKCSY 458
Score = 25.8 bits (50), Expect(5) = 4e-051
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 485 EMSKLRAKFEALQRTQR 535
E KL+A+ E LQRTQR
Sbjct: 519 EYLKLKARVENLQRTQR 569
>dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31254
Length = 1175
Score = 115 bits (246), Expect(3) = 1e-050
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 254 IEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 433
Query: 386 SA 391
S+
Sbjct: 434 SS 439
Score = 99.1 bits (210), Expect(3) = 1e-050
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +2 / +2
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 518 EMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 697
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++++ +L+RKE+ L + NR LK KL+
Sbjct: 698 LLDELCDLKRKEQMLQDANRVLKRKLD 778
Score = 29.5 bits (58), Expect(3) = 1e-050
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 437 SSNMLKTLERYQRYIYASQDAAAPTSD 517
>gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS212
mRNA, complete cds
Length = 1095
Score = 115 bits (246), Expect(3) = 1e-050
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = +2 / +3
Query: 176 RRKEGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 355
R K R MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++F
Sbjct: 66 RLKRDLEREIEMMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLF 245
Query: 356 SSRGKLYEFGSA 391
S G+LY+F S+
Sbjct: 246 SHAGRLYQFSSS 281
Score = 99.1 bits (210), Expect(3) = 1e-050
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 360 EMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 539
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++++ +L+RKE+ L + NR LK KL+
Sbjct: 540 LLDELCDLKRKEQMLQDANRVLKRKLD 620
Score = 29.5 bits (58), Expect(3) = 1e-050
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 279 SSNMLKTLERYQRYIYASQDAAAPTSD 359
>gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS217
mRNA, complete cds
Length = 1028
Score = 115 bits (246), Expect(3) = 1e-050
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 114 IEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 293
Query: 386 SA 391
S+
Sbjct: 294 SS 299
Score = 99.1 bits (210), Expect(3) = 1e-050
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 378 EMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 557
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++++ +L+RKE+ L + NR LK KL+
Sbjct: 558 LLDELCDLKRKEQMLQDANRVLKRKLD 638
Score = 29.5 bits (58), Expect(3) = 1e-050
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 297 SSNMLKTLERYQRYIYASQDAAAPTSD 377
>ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 839
Score = 115 bits (246), Expect(3) = 1e-050
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 114 IEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 293
Query: 386 SA 391
S+
Sbjct: 294 SS 299
Score = 99.1 bits (210), Expect(3) = 1e-050
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 378 EMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 557
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++++ +L+RKE+ L + NR LK KL+
Sbjct: 558 LLDELCDLKRKEQMLQDANRVLKRKLD 638
Score = 29.5 bits (58), Expect(3) = 1e-050
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 297 SSNMLKTLERYQRYIYASQDAAAPTSD 377
>dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E14, full
insert sequence
Length = 1284
Score = 115 bits (246), Expect(3) = 3e-050
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2 / +3
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 279 IEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 458
Query: 386 SA 391
S+
Sbjct: 459 SS 464
Score = 97.7 bits (207), Expect(3) = 3e-050
Identities = 43/87 (49%), Positives = 63/87 (72%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 543 EMQNNYQE*VNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 722
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLE 724
+++++ +L+RKE+ L + NR LK KL+
Sbjct: 723 LLDELCDLKRKEQMLQDANRVLKRKLD 803
Score = 29.5 bits (58), Expect(3) = 3e-050
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +3
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 462 SSNMLKTLERYQRYIYASQDAAAPTSD 542
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10)
mRNA, complete cds
Length = 964
Score = 119 bits (254), Expect(2) = 5e-050
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +2 / +2
Query: 176 RRKEGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 355
RR+ ++ MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIF
Sbjct: 53 RRRRRRRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIF 232
Query: 356 SSRGKLYEFGS 388
S++GKLYE+ +
Sbjct: 233 STKGKLYEYAT 265
Score = 104 bits (221), Expect(2) = 5e-050
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK+QLM+E
Sbjct: 356 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 535
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL+RKE+ L E N+ L+ +L
Sbjct: 536 SINELQRKEKSLQEENKVLQKEL 604
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211
mRNA, complete cds
Length = 1109
Score = 119 bits (254), Expect(2) = 2e-049
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +2 / +3
Query: 176 RRKEGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 355
RR+ ++ MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIF
Sbjct: 66 RRRRRRRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIF 245
Query: 356 SSRGKLYEFGS 388
S++GKLYE+ +
Sbjct: 246 STKGKLYEYAT 278
Score = 102 bits (217), Expect(2) = 2e-049
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK+QLM+E
Sbjct: 369 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 548
Query: 653 QVEELRRKERHLGEMNRQLK 712
+ EL+RKE+ L E N+ L+
Sbjct: 549 SINELQRKEKSLQEENKVLQ 608
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full
insert sequence
Length = 1284
Score = 119 bits (254), Expect(2) = 2e-049
Identities = 51/71 (71%), Positives = 62/71 (87%)
Frame = +2 / +2
Query: 176 RRKEGS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 355
RR+ ++ MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIF
Sbjct: 272 RRRRRRRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIF 451
Query: 356 SSRGKLYEFGS 388
S++GKLYE+ +
Sbjct: 452 STKGKLYEYAT 484
Score = 101 bits (216), Expect(2) = 2e-049
Identities = 42/79 (53%), Positives = 59/79 (74%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK+QLM+E
Sbjct: 575 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 754
Query: 653 QVEELRRKERHLGEMNRQL 709
+ EL+RKE+ L E N+ L
Sbjct: 755 SINELQRKEKSLQEENKVL 811
>gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS221
mRNA, complete cds
Length = 1070
Score = 115 bits (246), Expect(3) = 3e-049
Identities = 46/62 (74%), Positives = 57/62 (91%)
Frame = +2 / +2
Query: 206 VAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 385
+ MGRG+V L+RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVAL++FS G+LY+F
Sbjct: 146 IEMGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFS 325
Query: 386 SA 391
S+
Sbjct: 326 SS 331
Score = 94.1 bits (199), Expect(3) = 3e-049
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = +2 / +2
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
E Q+ YQE L+A E LQ++QR+LLGE+L PL+ EL+QLE Q+ L Q R RKTQ+
Sbjct: 410 EMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQV 589
Query: 644 MMEQVEELRRKERHLGEMNRQLK 712
+++++ +L+RKE+ L + NR LK
Sbjct: 590 LLDELCDLKRKEQMLQDANRVLK 658
Score = 29.5 bits (58), Expect(3) = 3e-049
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2 / +2
Query: 386 SAGITKTLERYQHCCYNAQDSNGALSE 466
S+ + KTLERYQ Y +QD+ S+
Sbjct: 329 SSNMLKTLERYQRYIYASQDAAAPTSD 409
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 813
Score = 118 bits (252), Expect(2) = 3e-049
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA E+SVLCDAEVALIIFS++GKLYE+ +
Sbjct: 24 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYAT 200
Score = 102 bits (217), Expect(2) = 3e-049
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ Q+HL+GE+L L++KELQQLE+QLE +L R RK+QLM+E
Sbjct: 291 NWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLE 470
Query: 653 QVEELRRKERHLGEMNRQLK 712
+ EL+RKE+ L E N+ L+
Sbjct: 471 SINELQRKEKSLQEENKVLQ 530
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 141 bits (302), Expect(4) = 1e-048
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 3058313 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 3058492
Query: 392 G 394
G
Sbjct: 3058493 G 3058495
Score = 70.7 bits (148), Expect(4) = 1e-048
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +2
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RH+LGE+LGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 3061076 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 3061177
Score = 43.7 bits (89), Expect(4) = 1e-048
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDSNGALS 463
I KTLE+Y CCYNAQ SN AL+
Sbjct: 3060444 INKTLEKYNSCCYNAQGSNSALA 3060512
Score = 42.3 bits (86), Expect(4) = 1e-048
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRH 538
SWYQEMS+L+ K E LQR+QR+
Sbjct: 3060931 SWYQEMSRLKTKLECLQRSQRY 3060996
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215
mRNA, complete cds
Length = 1136
Score = 119 bits (255), Expect(2) = 3e-048
Identities = 50/67 (74%), Positives = 59/67 (88%)
Frame = +2 / +3
Query: 188 GS*RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRG 367
G R+ MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +G
Sbjct: 144 GERRAARMMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKG 323
Query: 368 KLYEFGS 388
KLYE+ +
Sbjct: 324 KLYEYAT 344
Score = 97.7 bits (207), Expect(2) = 3e-048
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2 / +3
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L RK+ LM+E
Sbjct: 435 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLE 614
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 615 SISELQKKERSLQEENKALQKEL 683
>ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1088
Score = 120 bits (256), Expect(2) = 3e-048
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 266
Score = 97.3 bits (206), Expect(2) = 3e-048
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
+ ++W E L++K +ALQ++QR LLGE+L L++KELQQLE QLE +L R +K QL
Sbjct: 348 DQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQL 527
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAE 730
+ E + EL++KE+ L N L+ +E E
Sbjct: 528 LFESISELQKKEKSLKNQNNVLQKLMETE 614
>emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein
Length = 974
Score = 120 bits (256), Expect(2) = 3e-048
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S
Sbjct: 77 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 253
Score = 97.3 bits (206), Expect(2) = 3e-048
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +2 / +2
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
+ ++W E L++K +ALQ++QR LLGE+L L++KELQQLE QLE +L R +K QL
Sbjct: 335 DQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQL 514
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAE 730
+ E + EL++KE+ L N L+ +E E
Sbjct: 515 LFESISELQKKEKSLKNQNNVLQKLMETE 601
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:E31864
Length = 1289
Score = 119 bits (254), Expect(2) = 4e-048
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = +2 / +2
Query: 197 RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 376
R MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLY
Sbjct: 110 RRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLY 289
Query: 377 EFGS 388
E+ +
Sbjct: 290 EYAT 301
Score = 97.7 bits (207), Expect(2) = 4e-048
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L RK+ LM+E
Sbjct: 392 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLE 571
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 572 SISELQKKERSLQEENKALQKEL 640
>dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A02, full
insert sequence
Length = 1088
Score = 120 bits (256), Expect(2) = 4e-048
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG V+L+RIENKINRQVTFSKRRNGLLKKA+E+SVLCDA+VALI+FS++GKLYEF S
Sbjct: 90 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSS 266
Score = 96.8 bits (205), Expect(2) = 4e-048
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +2 / +3
Query: 464 ETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQL 643
+ ++W E L++K +ALQ++QR LLGE+L L++KELQQLE QLE +L R +K QL
Sbjct: 348 DQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQL 527
Query: 644 MMEQVEELRRKERHLGEMNRQLKHKLEAE 730
+ E + EL++KE+ L N L+ +E E
Sbjct: 528 LFESIPELQKKEKSLKNQNNVLQKLMETE 614
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 807
Score = 118 bits (253), Expect(2) = 6e-048
Identities = 48/59 (81%), Positives = 56/59 (94%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYAT 177
Score = 97.7 bits (207), Expect(2) = 6e-048
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L RK+ LM+E
Sbjct: 268 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLE 447
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 448 SISELQKKERSLQEENKALQKEL 516
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 141 bits (302), Expect(4) = 6e-047
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2 / +3
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA
Sbjct: 7086150 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 7086329
Query: 392 G 394
G
Sbjct: 7086330 G 7086332
Score = 105 bits (225), Expect = 9e-021
Identities = 42/60 (70%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRGRVELK+IEN NRQVTFSKRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S
Sbjct: 8871286 SMGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSS 8871465
Score = 102 bits (217), Expect(2) = 2e-021
Identities = 39/60 (65%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
+MGRG++ ++RI+N +RQVTFSKRRNG+ KKA EL++LCDAEV L+IFSS G+LYE+ S
Sbjct: 891682 SMGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAS 891861
Score = 70.7 bits (148), Expect(4) = 6e-047
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +2 / +2
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RH+LGE+LGPLS+KELQQLEKQLE +LSQARQRK
Sbjct: 7088903 RHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRK 7089004
Score = 43.7 bits (89), Expect(4) = 6e-047
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 395 ITKTLERYQHCCYNAQDSNGALS 463
I KTLE+Y CCYNAQ SN AL+
Sbjct: 7088271 INKTLEKYNSCCYNAQGSNSALA 7088339
Score = 42.3 bits (86), Expect(4) = 6e-047
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 473 SWYQEMSKLRAKFEALQRTQRH 538
SWYQEMS+L+ K E LQR+QR+
Sbjct: 7088758 SWYQEMSRLKTKLECLQRSQRY 7088823
Score = 42.3 bits (86), Expect(2) = 2e-021
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2 / +1
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLM 646
R L+G++L L VKELQ LE QLE ++ R +K L+
Sbjct: 898846 RQLMGQDLSGLGVKELQTLENQLEMSIRCIRTKKVNLL 898959
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full
insert sequence
Length = 2563
Score = 119 bits (254), Expect(2) = 1e-046
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = +2 / +3
Query: 197 RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 376
R MGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA I+FS +GKLY
Sbjct: 168 RRAARMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLY 347
Query: 377 EFGS 388
E+ +
Sbjct: 348 EYAT 359
Score = 97.7 bits (207), Expect(2) = 1e-046
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +2 / +2
Query: 473 SWYQEMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMME 652
+W E KL+AK E +Q+ +HL+GE+L L++KELQQLE+QLE +L RK+ LM+E
Sbjct: 1784 NWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLE 1963
Query: 653 QVEELRRKERHLGEMNRQLKHKL 721
+ EL++KER L E N+ L+ +L
Sbjct: 1964 SISELQKKERSLQEENKALQKEL 2032
>gb|AACV01005163.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005163, whole
genome shotgun sequence
Length = 11617
Score = 78.5 bits (165), Expect(8) = 2e-044
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2 / -3
Query: 533 RHLLGEELGPLSVKELQQLEKQLECALSQARQRK 634
RHLLGE+LGPLSVKELQQLEKQLECALSQARQRK
Sbjct: 7736 RHLLGEDLGPLSVKELQQLEKQLECALSQARQRK 7635
Score = 65.2 bits (136), Expect(8) = 2e-044
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2 / -2
Query: 395 ITKTLERYQHCCYNAQDSNGALSETQ 472
ITKTLERYQHCCYNAQDSN ALSETQ
Sbjct: 10041 ITKTLERYQHCCYNAQDSNNALSETQ 9964
Score = 57.4 bits (119), Expect(5) = 5e-024
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1 / -2
Query: 514 GLAAHSEALAWGGTWPTECEGVAAARETARMCFVTGKTEK 633
G A +ALAWGG+W T+ + +AAA ETA MC +TG+TEK
Sbjct: 7755 GFA*FLKALAWGGSWTTQRQRIAAAGETA*MCTITGETEK 7636
Score = 53.3 bits (110), Expect(7) = 4e-027
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3 / +2
Query: 468 VSESAPLES*AL*QQCWYLSKVFVM 394
VSESA LES*AL*QQCWYLSKVFVM
Sbjct: 9968 VSESALLES*AL*QQCWYLSKVFVM 10042
Score = 51.5 bits (106), Expect(5) = 5e-024
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +1 / -1
Query: 391 RHNKNFRKVPTLLLQCSRFQWRTL*N 468
+HNK+FRKVPTLLLQCSRFQ T *N
Sbjct: 10045 QHNKDFRKVPTLLLQCSRFQQCTF*N 9968
Score = 50.1 bits (103), Expect(7) = 4e-027
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -3 / +1
Query: 540 KCL*VRCKASNFALSFDISWYQL 472
K L*VRCKASNFA +FDISWYQL
Sbjct: 7960 KYL*VRCKASNFAFNFDISWYQL 8028
Score = 50.1 bits (103), Expect(8) = 2e-044
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +2 / -3
Query: 470 QSWYQEMSKLRAKFEALQRTQRH 538
+SWY EMSKL+AKFEALQRTQR+
Sbjct: 8030 KSWYHEMSKLKAKFEALQRTQRY 7962
Score = 35.9 bits (72), Expect(8) = 2e-044
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / -3
Query: 948 RTTSCWDGFFEL 983
RTTSCWDGFFEL
Sbjct: 5426 RTTSCWDGFFEL 5391
Score = 35.4 bits (71), Expect(7) = 4e-027
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3 / +2
Query: 678 SFLRSSSTCSIISCV 634
+FLRSSSTCSIISCV
Sbjct: 6263 TFLRSSSTCSIISCV 6307
Score = 35.4 bits (71), Expect(5) = 5e-024
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 932 SPPGGENNFMLGWVL* 979
+P G ENNFMLGWVL*
Sbjct: 5442 APAGAENNFMLGWVL* 5395
Score = 35.0 bits (70), Expect(5) = 5e-024
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +2 / -2
Query: 632 KTQLMMEQVEELRRKERHLGEMNR 703
+TQLMMEQVEELRRK + ++++
Sbjct: 6309 QTQLMMEQVEELRRKVHYQSKVSQ 6238
Score = 34.1 bits (68), Expect(7) = 4e-027
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -3 / +1
Query: 633 FLCLACDKAHXXXXXXXXXXFTLXXXXXXXSKCL*VRCK 517
FLCLACD AH TL SKCL* K
Sbjct: 7636 FLCLACDSAHSSCFSSCCNSLTLSGPRSSPSKCL*ESSK 7752
Score = 33.1 bits (66), Expect(8) = 2e-044
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / -2
Query: 674 KERHLGEMNRQLKHKL 721
+ER LGE+NRQLKHK+
Sbjct: 5958 QERQLGEINRQLKHKV 5911
Score = 32.2 bits (64), Expect(7) = 4e-027
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 978 QRTHPSMKLFSPP 940
QRTHPSMKLFS P
Sbjct: 5396 QRTHPSMKLFSAP 5434
Score = 31.3 bits (62), Expect(5) = 5e-024
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 472 ELVPGNVKTEGKIRGLAAHSE 534
ELVP NVK E KI AAHS+
Sbjct: 8028 ELVP*NVKVESKI*SFAAHSK 7966
Score = 28.6 bits (56), Expect(7) = 4e-027
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -3 / +1
Query: 879 YPICRVGSQSIATD 838
YPIC+VGS+S+A +
Sbjct: 5668 YPICKVGSESMAAE 5709
Score = 28.1 bits (55), Expect(7) = 4e-027
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3 / +2
Query: 759 CCRVL*LLQPSASSLCLSCLFISPRCRS 676
C + * + +LCLSCL ISP RS
Sbjct: 5873 CTALA*QISE*IRTLCLSCLLISPS*RS 5956
Score = 27.6 bits (54), Expect(8) = 2e-044
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / -3
Query: 839 SVAMDCEPTLQIG 877
S AMD EPTLQIG
Sbjct: 5708 SAAMDSEPTLQIG 5670
Score = 26.3 bits (51), Expect(8) = 2e-044
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 633 RHNL*WSKWKSSAER 677
R N *W+KW++ AER
Sbjct: 6308 RRN**WNKWRNFAER 6264
Score = 25.8 bits (50), Expect(8) = 2e-044
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 738 ATTEPCSMQPG 770
ATTEPCS PG
Sbjct: 5794 ATTEPCSKPPG 5762
>gb|AY345220.1| Oryza sativa (japonica cultivar-group) transcription factor MADS23
mRNA, complete cds; alternatively spliced
Length = 695
Score = 184 bits (396), Expect = 2e-044
Identities = 79/160 (49%), Positives = 108/160 (67%)
Frame = +2 / +3
Query: 197 RSYVAMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLY 376
RS MGRG++E+KRI+N +RQVTFSKRR+GL KKA ELS+LCDAEV L++FSS +LY
Sbjct: 15 RSKGKMGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLY 194
Query: 377 EFGSAGITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEEL 556
+F S+ + +ERY + + A SE + W QE + LR + LQ R LLG++L
Sbjct: 195 DFASSSMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQL 374
Query: 557 GPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRK 676
L V++LQ LE +LE +L R RK +MM+Q++EL RK
Sbjct: 375 SGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 494
>gb|AU225854.1|AU225854 AU225854 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0886, mRNA sequence
Length = 502
Score = 106 bits (227), Expect(3) = 5e-044
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2 / +1
Query: 242 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
IENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 16 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 162
Score = 87.7 bits (185), Expect(3) = 5e-044
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +2 / +1
Query: 485 EMSKLRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEE 664
E KL+A+ E LQRTQR+LLGE+L L +KEL+ LEKQL+ +L R +T+ +++Q+ E
Sbjct: 271 EYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTE 450
Query: 665 LRRKERHLGEMNRQL 709
L+RKE+ + E NR L
Sbjct: 451 LQRKEQMVSEANRCL 495
Score = 27.2 bits (53), Expect(3) = 5e-044
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 395 ITKTLERYQHCCY 433
+TKTLE+YQ C Y
Sbjct: 172 MTKTLEKYQKCSY 210
>ref|XM_472756.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 708
Score = 182 bits (391), Expect = 1e-043
Identities = 77/170 (45%), Positives = 111/170 (65%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
MGRG++ ++RI+N +RQVTFSKRRNG+ KKA EL++LCDAEV L+IFSS G+LYE+ S
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLVIFSSTGRLYEYAST 180
Query: 392 GITKTLERYQHCCYNAQDSNGALSETQSWYQEMSKLRAKFEALQRTQRHLLGEELGPLSV 571
+ ++RY Q SE + W +E + LR + +LQ R L+G++L L V
Sbjct: 181 SMKSVIDRYGRAKEEQQHVANPNSELKFWQREAASLRQQLHSLQENHRQLMGQDLSGLGV 360
Query: 572 KELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMNRQLKHKL 721
KELQ LE QLE ++ R +K QLM++++ EL RK + + N +L K+
Sbjct: 361 KELQTLENQLEMSIRCIRTKKDQLMIDEIHELNRKGSLIHQENMELYRKV 510
>gb|AY332476.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL20)
mRNA, complete cds
Length = 875
Score = 128 bits (275), Expect(2) = 3e-043
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +2 / +2
Query: 209 AMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS 388
AM RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 68 AMVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 247
Query: 389 AGITKTLERYQ 421
A KT+ERY+
Sbjct: 248 ASTQKTIERYR 280
Score = 72.1 bits (151), Expect(2) = 3e-043
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 497 LRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRK 676
L K EAL+ +R LLGE+L S++EL LE +LE +L R RKT+L+ EQV +LR K
Sbjct: 356 LAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREK 535
Query: 677 ERHLGEMNRQLKHK 718
E L + N +L+ K
Sbjct: 536 EMKLRKDNEELREK 577
>dbj|AK067641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C22, full
insert sequence
Length = 1117
Score = 127 bits (271), Expect(2) = 9e-043
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +2 / +1
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF SA
Sbjct: 184 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 363
Query: 392 GITKTLERYQ 421
KT+ERY+
Sbjct: 364 STQKTIERYR 393
Score = 72.1 bits (151), Expect(2) = 9e-043
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +2 / +1
Query: 497 LRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRK 676
L K EAL+ +R LLGE+L S++EL LE +LE +L R RKT+L+ EQV +LR K
Sbjct: 469 LAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREK 648
Query: 677 ERHLGEMNRQLKHK 718
E L + N +L+ K
Sbjct: 649 EMKLRKDNEELREK 690
>dbj|AB003328.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like
protein, complete cds, clone:S11905
Length = 1095
Score = 127 bits (271), Expect(2) = 9e-043
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +2 / +2
Query: 212 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 391
M RG+ ++KRIEN +RQVTFSKRRNGLLKKA+ELSVLCDAEVALI+FS RGKLYEF SA
Sbjct: 164 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 343
Query: 392 GITKTLERYQ 421
KT+ERY+
Sbjct: 344 STQKTIERYR 373
Score = 72.1 bits (151), Expect(2) = 9e-043
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +2 / +2
Query: 497 LRAKFEALQRTQRHLLGEELGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRK 676
L K EAL+ +R LLGE+L S++EL LE +LE +L R RKT+L+ EQV +LR K
Sbjct: 449 LAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREK 628
Query: 677 ERHLGEMNRQLKHK 718
E L + N +L+ K
Sbjct: 629 EMKLRKDNEELREK 670
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 9,571,536,106
Number of Sequences: 438736
Number of extensions: 168147450
Number of successful extensions: 803864
Number of sequences better than 1.0e-020: 326
length of database: 933,473,305
effective HSP length: 61
effective length of database: 906,710,409
effective search space used: 346363376238
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)