TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750763.3.1
(819 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01008547.1| Oryza sativa (japonica cultivar-group) c... 387 e-106
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 387 e-106
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 387 e-106
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 387 e-106
emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromoso... 387 e-106
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 387 e-106
ref|XM_471234.1| Oryza sativa (japonica cultivar-group), p... 385 e-105
gb|AZ135244.1|AZ135244 OSJNBb0115A18r CUGI Rice BAC Library... 381 e-104
gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A0... 171 1e-067
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 171 8e-067
gb|AC025905.3| Oryza sativa (japonica cultivar-group) chrom... 171 9e-067
ref|NM_196827.1| Oryza sativa (japonica cultivar-group) put... 171 9e-067
gb|AU070353.1|AU070353 AU070353 Rice green shoot Oryza sati... 253 1e-065
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 153 3e-062
gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) c... 153 3e-062
dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chro... 227 1e-057
dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA... 227 1e-057
ref|NT_107232.1| Oryza sativa (japonica cultivar-group) 227 1e-057
gb|AACV01014423.1| Oryza sativa (japonica cultivar-group) c... 227 1e-057
dbj|AP003724.2| Oryza sativa (japonica cultivar-group) geno... 227 1e-057
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 227 1e-057
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 227 1e-057
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 227 1e-057
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 173 2e-051
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 173 2e-051
dbj|AP003767.3| Oryza sativa (japonica cultivar-group) geno... 173 2e-051
dbj|AP003487.2| Oryza sativa (japonica cultivar-group) geno... 173 2e-051
gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) c... 173 2e-051
dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA... 173 2e-051
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 166 8e-049
dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chro... 166 9e-049
dbj|AP004039.3| Oryza sativa (japonica cultivar-group) geno... 166 9e-049
dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA... 166 9e-049
ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA 166 9e-049
dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA... 163 2e-048
gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) c... 114 4e-043
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-042
gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) c... 113 1e-042
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 171 9e-041
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 171 9e-041
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 166 2e-039
gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (... 164 1e-038
gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (... 158 7e-037
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 153 3e-035
dbj|AK072592.1| Oryza sativa (japonica cultivar-group) cDNA... 109 2e-025
gb|AACV01011622.1| Oryza sativa (japonica cultivar-group) c... 109 5e-024
gb|AC136521.2| Oryza sativa (japonica cultivar-group) chrom... 109 2e-023
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-023
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 109 3e-022
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 109 3e-022
dbj|AP005541.3| Oryza sativa (japonica cultivar-group) geno... 88 5e-022
dbj|AP004696.3| Oryza sativa (japonica cultivar-group) geno... 88 5e-022
gb|AACV01017899.1| Oryza sativa (japonica cultivar-group) c... 88 5e-022
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 109 5e-022
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 109 5e-022
ref|XM_481288.1| Oryza sativa (japonica cultivar-group), mRNA 88 5e-022
>gb|AACV01008547.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008547, whole
genome shotgun sequence
Length = 35849
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +2
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 32807 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 32986
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 32987 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 33166
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 33167 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 33301
Score = 124 bits (266), Expect(3) = 2e-033
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -2
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 33190 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 33011
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 33010 AGVGDHVDL 32984
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 33087 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 32908
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 32907 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 32797
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 33300 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 33151
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 33299 ATRSGWASSGPWHCRW 33252
Score = 28.6 bits (56), Expect(3) = 2e-033
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -1
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WT 332
+SRC SRR R C RTTG+ + P C * T
Sbjct: 32954 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*ST 32814
>ref|NT_107194.1| Oryza sativa (japonica cultivar-group)
Length = 2696338
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +1
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 2470465 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 2470644
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 2470645 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 2470824
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 2470825 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 2470959
Score = 124 bits (266), Expect(3) = 2e-033
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -2
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 2470848 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 2470669
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 2470668 AGVGDHVDL 2470642
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -3
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 2470745 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 2470566
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 2470565 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 2470455
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 2470958 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 2470809
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 2470957 ATRSGWASSGPWHCRW 2470910
Score = 28.6 bits (56), Expect(3) = 2e-033
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -1
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WT 332
+SRC SRR R C RTTG+ + P C * T
Sbjct: 2470612 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*ST 2470472
>gb|CH401184.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000021
genomic scaffold, whole genome shotgun sequence
Length = 2817894
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +1
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 668578 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 668757
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 668758 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 668937
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 668938 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 669072
Score = 124 bits (266), Expect(3) = 2e-033
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -1
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 668961 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 668782
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 668781 AGVGDHVDL 668755
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -2
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 668858 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 668679
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 668678 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 668568
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 669071 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 668922
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 669070 ATRSGWASSGPWHCRW 669023
Score = 28.6 bits (56), Expect(3) = 2e-033
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -3
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WT 332
+SRC SRR R C RTTG+ + P C * T
Sbjct: 668725 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*ST 668585
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +3
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 2154483 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 2154662
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 2154663 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 2154842
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 2154843 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 2154977
Score = 124 bits (266), Expect = 1e-026
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -3
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 2154866 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 2154687
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 2154686 AGVGDHVDL 2154660
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -1
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 2154763 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 2154584
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 2154583 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 2154473
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 2154976 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 2154827
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
complete sequence
Length = 138572
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +3
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 86517 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 86696
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 86697 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 86876
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 86877 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 87011
Score = 124 bits (266), Expect(3) = 2e-033
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -1
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 86900 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 86721
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 86720 AGVGDHVDL 86694
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -2
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 86797 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 86618
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 86617 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 86507
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 87010 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 86861
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 87009 ATRSGWASSGPWHCRW 86962
Score = 28.6 bits (56), Expect(3) = 2e-033
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -3
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WT 332
+SRC SRR R C RTTG+ + P C * T
Sbjct: 86664 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*ST 86524
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 387 bits (840), Expect = e-106
Identities = 149/165 (90%), Positives = 157/165 (95%)
Frame = +1 / +1
Query: 325 LCRSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGK 504
+ RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGK
Sbjct: 2470615 IIRSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGK 2470794
Query: 505 IYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGAN 684
IYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGAN
Sbjct: 2470795 IYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGAN 2470974
Query: 685 VHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
VHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 2470975 VHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 2471109
Score = 124 bits (266), Expect = 1e-026
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -1
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 2470998 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 2470819
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 2470818 AGVGDHVDL 2470792
Score = 124 bits (265), Expect(2) = 2e-056
Identities = 58/97 (59%), Positives = 64/97 (65%)
Frame = -2 / -2
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 2470895 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 2470716
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHL 315
S S QQSS+GLPVPHDR P F AV+ L+DL + +
Sbjct: 2470715 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDLMMNSI 2470605
Score = 119 bits (255), Expect(2) = 2e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 2471108 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 2470959
>ref|XM_471234.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1419
Score = 385 bits (834), Expect = e-105
Identities = 148/162 (91%), Positives = 155/162 (95%)
Frame = +1 / +1
Query: 334 SINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYV 513
SI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGKIYV
Sbjct: 313 SIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIYV 492
Query: 514 VTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
VTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGANVHI
Sbjct: 493 VTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVHI 672
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
ANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 673 ANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 798
Score = 124 bits (266), Expect(3) = 6e-035
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -1
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 687 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 508
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 507 AGVGDHVDL 481
Score = 123 bits (263), Expect(2) = 4e-056
Identities = 58/99 (58%), Positives = 65/99 (65%)
Frame = -2 / -2
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 584 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 405
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDLQSSHLSS 309
S S QQSS+GLPVPHDR P F AV+ L+D+ + +S
Sbjct: 404 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDMCTCETTS 288
Score = 119 bits (255), Expect(2) = 4e-056
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 797 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 648
Score = 33.6 bits (67), Expect(3) = 6e-035
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -3 / -3
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WTCRAA 320
+SRC SRR R C RTTG+ + P C * TC A
Sbjct: 451 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*STCALA 299
Score = 31.8 bits (63), Expect(3) = 6e-035
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 796 ATRSGWASSGPWHCRW 749
>gb|AZ135244.1|AZ135244 OSJNBb0115A18r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0115A18r, DNA
sequence
Length = 589
Score = 381 bits (827), Expect = e-104
Identities = 147/163 (90%), Positives = 154/163 (94%)
Frame = +1 / +3
Query: 331 RSINNITARRNLGYLSCGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIY 510
RSI N TARR LGYLSCGTGNPIDDCWRCD DWH NR+RLADCGIGFGRNAIGGRDGKIY
Sbjct: 6 RSIRNSTARRKLGYLSCGTGNPIDDCWRCDPDWHKNRQRLADCGIGFGRNAIGGRDGKIY 185
Query: 511 VVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVH 690
VVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTIDGRGANVH
Sbjct: 186 VVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGANVH 365
Query: 691 IANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IANGACITIQY+TNVIIHGLH HDC+PTGNAMVRSSPSHY WR
Sbjct: 366 IANGACITIQYVTNVIIHGLHXHDCRPTGNAMVRSSPSHYXWR 494
Score = 124 bits (266), Expect(3) = 2e-033
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = -1 / -3
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA +VDGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 383 AGAIGDVHVGATAVDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 204
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 203 AGVGDHVDL 177
Score = 123 bits (264), Expect(2) = 3e-053
Identities = 58/92 (63%), Positives = 62/92 (67%)
Frame = -2 / -1
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILPSRPPMALRPKPMPQSARRFRLLCQ 426
K I SGSS MTA R VP *ILPSRPPMALRPKPMPQSA R+R LCQ
Sbjct: 280 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILPSRPPMALRPKPMPQSASRWRFLCQ 101
Query: 425 SESQRQQSSMGLPVPHDRYPRFRRAVMLLMDL 330
S S QQSS+GLPVPHDR P F AV+ L+DL
Sbjct: 100 SGSHLQQSSIGLPVPHDR*PSFLLAVLFLIDL 5
Score = 109 bits (233), Expect(2) = 3e-053
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RH *WLGELRTMA PVGLQS M PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 493 RHX*WLGELRTMALPVGLQSXMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 344
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 819 APPIVAGRAAHHGVPRGLA 763
APP+VAGRA HG+ G A
Sbjct: 494 APPVVAGRAPDHGIAGGPA 438
Score = 28.6 bits (56), Expect(3) = 2e-033
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = -3 / -2
Query: 472 QSRCHSRRXXXXXXXXXXXXXXXXRWGCLSRTTGTRDFAGP*CC*WT 332
+SRC SRR R C RTTG+ + P C * T
Sbjct: 147 RSRCRSRRAAGDSCASPGRTSSSRRSDCRCRTTGSPASSSPCCS*ST 7
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
sequence
Length = 117157
Score = 171 bits (368), Expect(3) = 1e-067
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / +1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 111688 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 111867
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 111868 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 111969
Score = 90.0 bits (190), Expect(3) = 1e-067
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / +1
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 111964 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 112089
Score = 72.1 bits (151), Expect(3) = 2e-029
Identities = 34/62 (54%), Positives = 39/62 (62%)
Frame = -1 / -2
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DV VGAA+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD
Sbjct: 111960 DVDVGAAAVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGD 111781
Query: 513 HV 508
V
Sbjct: 111780 DV 111775
Score = 71.2 bits (149), Expect(3) = 2e-029
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 112088 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 111963
Score = 39.1 bits (79), Expect(3) = 1e-067
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRC 417
C TGNPIDDCWRC
Sbjct: 111643 CLTGNPIDDCWRC 111681
Score = 27.6 bits (54), Expect(3) = 2e-029
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQSSMG PV H P
Sbjct: 111683 AHRQQSSMGFPVKHPPPP 111630
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 171 bits (368), Expect(3) = 8e-067
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -2
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 2978019 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 2977840
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 2977839 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 2977738
Score = 90.0 bits (190), Expect(3) = 8e-067
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / -2
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 2977743 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 2977618
Score = 72.1 bits (151), Expect(3) = 2e-028
Identities = 34/62 (54%), Positives = 39/62 (62%)
Frame = -1 / +1
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DV VGAA+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD
Sbjct: 2977747 DVDVGAAAVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGD 2977926
Query: 513 HV 508
V
Sbjct: 2977927 DV 2977932
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 2977619 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 2977744
Score = 35.9 bits (72), Expect(3) = 8e-067
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRC 417
C TGNPID CWRC
Sbjct: 2978064 CLTGNPIDHCWRC 2978026
Score = 24.4 bits (47), Expect(3) = 2e-028
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / +2
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQ SMG PV H P
Sbjct: 2978024 AHRQQWSMGFPVKHPPPP 2978077
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
complete sequence
Length = 179157
Score = 171 bits (368), Expect(3) = 9e-067
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 125277 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 125098
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 125097 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 124996
Score = 90.0 bits (190), Expect(3) = 9e-067
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / -1
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 125001 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 124876
Score = 72.1 bits (151), Expect(3) = 2e-028
Identities = 34/62 (54%), Positives = 39/62 (62%)
Frame = -1 / +1
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DV VGAA+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD
Sbjct: 125005 DVDVGAAAVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGD 125184
Query: 513 HV 508
V
Sbjct: 125185 DV 125190
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 124877 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 125002
Score = 35.9 bits (72), Expect(3) = 9e-067
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRC 417
C TGNPID CWRC
Sbjct: 125322 CLTGNPIDHCWRC 125284
Score = 24.4 bits (47), Expect(3) = 2e-028
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / +2
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQ SMG PV H P
Sbjct: 125282 AHRQQWSMGFPVKHPPPP 125335
>ref|NM_196827.1| Oryza sativa (japonica cultivar-group) putative pectate lyase
(OSJNBa0018F16.19), mRNA
Length = 1404
Score = 171 bits (368), Expect(3) = 9e-067
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / +1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 250 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 429
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 430 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 531
Score = 90.0 bits (190), Expect(3) = 9e-067
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / +1
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 526 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 651
Score = 72.1 bits (151), Expect(3) = 2e-028
Identities = 34/62 (54%), Positives = 39/62 (62%)
Frame = -1 / -1
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DV VGAA+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD
Sbjct: 522 DVDVGAAAVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGD 343
Query: 513 HV 508
V
Sbjct: 342 DV 337
Score = 71.2 bits (149), Expect(3) = 2e-028
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / -2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 650 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 525
Score = 35.9 bits (72), Expect(3) = 9e-067
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRC 417
C TGNPID CWRC
Sbjct: 205 CLTGNPIDHCWRC 243
Score = 24.4 bits (47), Expect(3) = 2e-028
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / -2
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQ SMG PV H P
Sbjct: 245 AHRQQWSMGFPVKHPPPP 192
>gb|AU070353.1|AU070353 AU070353 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12346_8A, mRNA sequence
Length = 562
Score = 253 bits (548), Expect = 1e-065
Identities = 99/108 (91%), Positives = 105/108 (97%)
Frame = +1 / +1
Query: 496 DGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGR 675
DGKIYVVTDPSDDD VNP+KGTLRYAVI +EPLWI+FKRDMVITLK+ELIMNSFKTI GR
Sbjct: 1 DGKIYVVTDPSDDDAVNPKKGTLRYAVIRDEPLWIVFKRDMVITLKQELIMNSFKTIXGR 180
Query: 676 GANVHIANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GANVHIANGACITIQY+TNVIIHGLHIHDC+PTGNAMVRSSPSHYGWR
Sbjct: 181 GANVHIANGACITIQYVTNVIIHGLHIHDCRPTGNAMVRSSPSHYGWR 324
Score = 122 bits (261), Expect(2) = 1e-029
Identities = 52/69 (75%), Positives = 56/69 (81%)
Frame = -1 / -2
Query: 708 AGTIGDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVI 529
AG IGDVHVGA + DGLEAVHD+LLLERD HV LEDDP+RL DDGV E AL V RVV+
Sbjct: 213 AGAIGDVHVGATAXDGLEAVHDQLLLERDHHVALEDDPQRLVADDGVPERALLGVHRVVV 34
Query: 528 ARVGDHVDL 502
A VGDHVDL
Sbjct: 33 AGVGDHVDL 7
Score = 119 bits (255), Expect(2) = 3e-027
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLAMCTLAPRP 669
RHP*WLGELRTMA PVGLQSWM PWMMTLV YWMVMQAPLAMCTLAPRP
Sbjct: 323 RHP*WLGELRTMALPVGLQSWMCRPWMMTLVTYWMVMQAPLAMCTLAPRP 174
Score = 31.8 bits (63), Expect(2) = 1e-029
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 817 ATHSGWASCAPWRSPW 770
AT SGWAS PW W
Sbjct: 322 ATRSGWASSGPWHCRW 275
Score = 26.7 bits (52), Expect(2) = 3e-027
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2 / -3
Query: 605 KMIQSGSSWMTA*RRVPXXXXXXXXXXXXXXX*ILP 498
K I SGSS MTA R VP *ILP
Sbjct: 110 KTIHSGSSRMTAYRSVPFLGFTASSSLGSVTT*ILP 3
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 153 bits (328), Expect(3) = 3e-062
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = +1 / -3
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 4189949 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 4189770
Query: 601 IFKRDMVITLKEELIMNSFKTIDG 672
+F DM I L EEL++NS+KTIDG
Sbjct: 4189769 VFAGDMTIRLNEELLVNSYKTIDG 4189698
Score = 90.0 bits (190), Expect(3) = 3e-062
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / -2
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 4189671 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 4189546
Score = 71.2 bits (149), Expect(3) = 9e-026
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 4189547 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 4189672
Score = 59.7 bits (124), Expect(3) = 9e-026
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 672 SVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGDHV 508
+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD V
Sbjct: 4189698 AVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGDDV 4189862
Score = 39.1 bits (79), Expect(3) = 3e-062
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRC 417
C TGNPIDDCWRC
Sbjct: 4189994 CLTGNPIDDCWRC 4189956
Score = 27.6 bits (54), Expect(3) = 9e-026
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQSSMG PV H P
Sbjct: 4189954 AHRQQSSMGFPVKHPPPP 4190007
>gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021719, whole
genome shotgun sequence
Length = 27956
Score = 153 bits (328), Expect(3) = 3e-062
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = +1 / -1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 12053 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 11874
Query: 601 IFKRDMVITLKEELIMNSFKTIDG 672
+F DM I L EEL++NS+KTIDG
Sbjct: 11873 VFAGDMTIRLNEELLVNSYKTIDG 11802
Score = 90.0 bits (190), Expect(3) = 3e-062
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1 / -3
Query: 694 ANGACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
A GACIT+QY++NVIIH +H+HDC P GNA VR+SP+HYGWR
Sbjct: 11775 AGGACITLQYVSNVIIHNIHVHDCVPAGNANVRASPTHYGWR 11650
Score = 71.2 bits (149), Expect(3) = 1e-025
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPLA 693
RHP* +GE RT+A P G QSW W WMMTL YW VM AP A
Sbjct: 11651 RHP*CVGEARTLALPAGTQSWTWMLWMMTLETYWSVMHAPPA 11776
Score = 59.7 bits (124), Expect(3) = 1e-025
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1 / +3
Query: 672 SVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGDHV 508
+VDGL AVH+ELL+E D HV E DPE +D V E V RV + VGD V
Sbjct: 11802 AVDGLVAVHEELLVEADGHVAGEHDPEGALLDGAVPERPRRGVHRVAVGGVGDDV 11966
Score = 39.1 bits (79), Expect(3) = 3e-062
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRC 417
C TGNPIDDCWRC
Sbjct: 12098 CLTGNPIDDCWRC 12060
Score = 27.6 bits (54), Expect(3) = 1e-025
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 419 SQRQQSSMGLPVPHDRYP 366
+ RQQSSMG PV H P
Sbjct: 12058 AHRQQSSMGFPVKHPPPP 12111
>dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0507H07, ***
SEQUENCING IN PROGRESS ***
Length = 101786
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 36161 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 35982
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 35981 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 35802
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 35801 IHNIHIHDILQGKGGMIRDSPEHFGFR 35721
Score = 114 bits (244), Expect(2) = 4e-043
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / -1
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 32561 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 32382
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 32381 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 32298
Score = 84.9 bits (179), Expect(2) = 4e-043
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C PID C RC +DW +RKRLA C GFG N GG GK Y+VTD +DDD VNP +G
Sbjct: 32737 CKATYPIDRC*RCRTDWATDRKRLALCAQGFGLNTTGGLAGKFYLVTDGTDDDAVNPPRG 32558
>dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G06, full
insert sequence
Length = 2078
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 482 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 661
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 662 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 841
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 842 IHNIHIHDILQGKGGMIRDSPEHFGFR 922
>ref|NT_107232.1| Oryza sativa (japonica cultivar-group)
Length = 367211
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 331809 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 331988
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 331989 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 332168
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 332169 IHNIHIHDILQGKGGMIRDSPEHFGFR 332249
Score = 114 bits (244), Expect(2) = 4e-043
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +3
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 335409 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 335588
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 335589 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 335672
Score = 84.9 bits (179), Expect(2) = 4e-043
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C PID C RC +DW +RKRLA C GFG N GG GK Y+VTD +DDD VNP +G
Sbjct: 335233 CKATYPIDRC*RCRTDWATDRKRLALCAQGFGLNTTGGLAGKFYLVTDGTDDDAVNPPRG 335412
>gb|AACV01014423.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014423,
whole genome shotgun sequence
Length = 8187
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 720 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 541
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 540 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 361
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 360 IHNIHIHDILQGKGGMIRDSPEHFGFR 280
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0498C03
Length = 146394
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 110992 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 111171
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 111172 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 111351
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 111352 IHNIHIHDILQGKGGMIRDSPEHFGFR 111432
Score = 114 bits (244), Expect(2) = 4e-043
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +1
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 114592 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 114771
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 114772 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 114855
Score = 84.9 bits (179), Expect(2) = 4e-043
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C PID C RC +DW +RKRLA C GFG N GG GK Y+VTD +DDD VNP +G
Sbjct: 114416 CKATYPIDRC*RCRTDWATDRKRLALCAQGFGLNTTGGLAGKFYLVTDGTDDDAVNPPRG 114595
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 3821822 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 3822001
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 3822002 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 3822181
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 3822182 IHNIHIHDILQGKGGMIRDSPEHFGFR 3822262
Score = 114 bits (244), Expect(2) = 3e-043
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +3
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 3826356 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 3826535
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 3826536 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 3826619
Score = 84.9 bits (179), Expect(2) = 3e-043
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C PID C RC +DW +RKRLA C GFG N GG GK Y+VTD +DDD VNP +G
Sbjct: 3826180 CKATYPIDRC*RCRTDWATDRKRLALCAQGFGLNTTGGLAGKFYLVTDGTDDDAVNPPRG 3826359
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 21520559 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 21520738
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 21520739 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 21520918
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 21520919 IHNIHIHDILQGKGGMIRDSPEHFGFR 21520999
Score = 173 bits (373), Expect = 2e-041
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2286592 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2286413
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2286412 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2286278
Score = 163 bits (351), Expect = 2e-038
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 2291246 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 2291067
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 2291066 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 2290932
Score = 114 bits (244), Expect = 1e-023
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +3
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 21525093 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 21525272
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 21525273 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 21525356
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 227 bits (490), Expect = 1e-057
Identities = 89/147 (60%), Positives = 106/147 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +DW +RKRLA C GFGRN GG GK Y+VTD +DDD NPR G
Sbjct: 22473859 CKATNPIDRCWRCRADWVTDRKRLARCAQGFGRNTTGGLAGKFYLVTDGTDDDVENPRPG 22474038
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNVI 738
TLR+ VI +EPLWIIF +DM+I LKEE+++NS KTIDGRGA V I NGA +T+Q NVI
Sbjct: 22474039 TLRWGVIQDEPLWIIFAKDMIINLKEEMMINSDKTIDGRGAQVRITNGAQVTVQNSNNVI 22474218
Query: 739 IHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IH +HIHD M+R SP H+G+R
Sbjct: 22474219 IHNIHIHDILQGKGGMIRDSPEHFGFR 22474299
Score = 173 bits (373), Expect = 2e-041
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2336724 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2336545
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2336544 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2336410
Score = 173 bits (373), Expect = 2e-041
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2377118 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2377297
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2377298 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2377432
Score = 163 bits (351), Expect = 2e-038
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 2372464 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 2372643
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 2372644 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 2372778
Score = 114 bits (244), Expect = 1e-023
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +1
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 22477459 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 22477638
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 22477639 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 22477722
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2286592 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2286413
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2286412 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2286278
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 2291246 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 2291067
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 2291066 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 2290932
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 2286275 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 2286454
Query: 516 DHVDL 502
HVDL
Sbjct: 2286455 HHVDL 2286469
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 2286274 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 2286155
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / -2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 2290928 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 2290809
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / +3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 2286156 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 2286278
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2340695 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2340874
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2340875 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2341009
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 2300301 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 2300122
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 2300121 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 2299987
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 2336041 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 2336220
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 2336221 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 2336355
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / +1
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 2299984 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 2300163
Query: 516 DHVDL 502
HVDL
Sbjct: 2300164 HHVDL 2300178
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / -3
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 2341012 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 2340833
Query: 516 DHVDL 502
HVDL
Sbjct: 2340832 HHVDL 2340818
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 2341013 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 2341132
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / +1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 2336359 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 2336478
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 2299983 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 2299864
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 2299865 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 2299987
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 2341131 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 2341009
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0036F10
Length = 149415
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 8576 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 8755
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 8756 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 8890
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 3922 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 4101
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 4102 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 4236
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / -3
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 8893 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 8714
Query: 516 DHVDL 502
HVDL
Sbjct: 8713 HHVDL 8699
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 8894 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 9013
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / +1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 4240 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 4359
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 9012 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 8890
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0007O20
Length = 147363
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 98919 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 99098
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 99099 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 99233
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 58525 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 58346
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 58345 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 58211
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 94265 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 94444
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 94445 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 94579
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / +2
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 58208 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 58387
Query: 516 DHVDL 502
HVDL
Sbjct: 58388 HHVDL 58402
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / -2
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 99236 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 99057
Query: 516 DHVDL 502
HVDL
Sbjct: 99056 HHVDL 99042
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 99237 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 99356
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / +2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 94583 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 94702
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 58207 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 58088
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / +3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 58089 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 58211
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 99355 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 99233
>gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013018, whole
genome shotgun sequence
Length = 32067
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 11577 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 11756
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 11757 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 11891
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 6923 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 7102
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 7103 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 7237
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / -2
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 11894 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 11715
Query: 516 DHVDL 502
HVDL
Sbjct: 11714 HHVDL 11700
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 11895 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 12014
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / +2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 7241 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 7360
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 12013 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 11891
>dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P11, full
insert sequence
Length = 1659
Score = 173 bits (373), Expect(2) = 2e-051
Identities = 68/105 (64%), Positives = 78/105 (74%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C GFG +GG GKIYVVTD SDD+ V PRKG
Sbjct: 459 CMATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRKG 638
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLRY VI + P+WI+F RDM+I L++ELI+N KTIDGRGA VHI
Sbjct: 639 TLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHI 773
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / -2
Query: 696 GDVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVG 517
GDVH+ A +VDGL VHD+LL E DDHV E DP R +D V E R D +V+A VG
Sbjct: 776 GDVHLRATAVDGLVVVHDQLLPELDDHVAREHDPHRPVLDHAVPERPFPRDDHLVVAGVG 597
Query: 516 DHVDL 502
HVDL
Sbjct: 596 HHVDL 582
Score = 53.3 bits (110), Expect(2) = 2e-051
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q + +VIIH +HIH P G M+R S HYG R
Sbjct: 777 GAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLR 896
Score = 48.3 bits (99), Expect(2) = 2e-022
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAPL 696
R P*W E R M P G + WMW+ WM+T W V+ AP+
Sbjct: 895 RRP*WRLESRIMPPPCGTEWWMWTLWMITCWTPWSVIWAPV 773
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 166 bits (358), Expect(2) = 8e-049
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 430875 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 430696
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 430695 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 430552
Score = 64.8 bits (135), Expect(3) = 2e-023
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = -1 / +1
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DVH+ AA+VDGL A +ELL E D H E DP+R + E A+ARV V +A VGD
Sbjct: 430561 DVHLRAAAVDGLVAGDEELLREADHHGLGEGDPQRRRLHGAPPERAVARVGGVAVAGVGD 430740
Query: 513 HVDL 502
VDL
Sbjct: 430741 DVDL 430752
Score = 52.4 bits (108), Expect(3) = 2e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 506 ILPSRPPMALRPKPMPQSARRFRLLCQSESQRQQSSMGLPVPH 378
ILP PP+A RPKPM A RFR + QS QRQ S+G H
Sbjct: 430748 ILPRTPPVAPRPKPMAHRASRFRSVAQSLRQRQHRSIGFVARH 430876
Score = 51.5 bits (106), Expect(2) = 8e-049
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 430551 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 430432
Score = 33.1 bits (66), Expect(3) = 2e-023
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAP 699
R P +GE RT + SW W M+TL W V+ AP
Sbjct: 430433 RGPMCVGESRTAPPSLCFTSWTWRLVMITLRANWTVIPAP 430552
>dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0542A02, ***
SEQUENCING IN PROGRESS ***
Length = 137445
Score = 166 bits (358), Expect(2) = 9e-049
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 125814 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 125993
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 125994 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 126137
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = -1 / -2
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DVH+ AA+VDGL A +ELL E D H E DP+R + E A+ARV V +A VGD
Sbjct: 126128 DVHLRAAAVDGLVAGDEELLREADHHGLGEGDPQRRRLHGAPPERAVARVGGVAVAGVGD 125949
Query: 513 HVDL 502
VDL
Sbjct: 125948 DVDL 125937
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / -3
Query: 506 ILPSRPPMALRPKPMPQSARRFRLLCQSESQRQQSSMGLPVPH 378
ILP PP+A RPKPM A RFR + QS QRQ S+G H
Sbjct: 125941 ILPRTPPVAPRPKPMAHRASRFRSVAQSLRQRQHRSIGFVARH 125813
Score = 51.5 bits (106), Expect(2) = 9e-049
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 126138 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 126257
Score = 33.1 bits (66), Expect(3) = 3e-023
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / -3
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAP 699
R P +GE RT + SW W M+TL W V+ AP
Sbjct: 126256 RGPMCVGESRTAPPSLCFTSWTWRLVMITLRANWTVIPAP 126137
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1006_D05
Length = 128178
Score = 166 bits (358), Expect(2) = 9e-049
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 42486 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 42307
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 42306 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 42163
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = -1 / +1
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DVH+ AA+VDGL A +ELL E D H E DP+R + E A+ARV V +A VGD
Sbjct: 42172 DVHLRAAAVDGLVAGDEELLREADHHGLGEGDPQRRRLHGAPPERAVARVGGVAVAGVGD 42351
Query: 513 HVDL 502
VDL
Sbjct: 42352 DVDL 42363
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / +2
Query: 506 ILPSRPPMALRPKPMPQSARRFRLLCQSESQRQQSSMGLPVPH 378
ILP PP+A RPKPM A RFR + QS QRQ S+G H
Sbjct: 42359 ILPRTPPVAPRPKPMAHRASRFRSVAQSLRQRQHRSIGFVARH 42487
Score = 51.5 bits (106), Expect(2) = 9e-049
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 42162 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 42043
Score = 33.1 bits (66), Expect(3) = 3e-023
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / +2
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAP 699
R P +GE RT + SW W M+TL W V+ AP
Sbjct: 42044 RGPMCVGESRTAPPSLCFTSWTWRLVMITLRANWTVIPAP 42163
>dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148H12, full
insert sequence
Length = 1825
Score = 166 bits (358), Expect(2) = 9e-049
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 447 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 626
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 627 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 770
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = -1 / -3
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DVH+ AA+VDGL A +ELL E D H E DP+R + E A+ARV V +A VGD
Sbjct: 761 DVHLRAAAVDGLVAGDEELLREADHHGLGEGDPQRRRLHGAPPERAVARVGGVAVAGVGD 582
Query: 513 HVDL 502
VDL
Sbjct: 581 DVDL 570
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 506 ILPSRPPMALRPKPMPQSARRFRLLCQSESQRQQSSMGLPVPH 378
ILP PP+A RPKPM A RFR + QS QRQ S+G H
Sbjct: 574 ILPRTPPVAPRPKPMAHRASRFRSVAQSLRQRQHRSIGFVARH 446
Score = 51.5 bits (106), Expect(2) = 9e-049
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 771 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 890
Score = 33.1 bits (66), Expect(3) = 3e-023
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAP 699
R P +GE RT + SW W M+TL W V+ AP
Sbjct: 889 RGPMCVGESRTAPPSLCFTSWTWRLVMITLRANWTVIPAP 770
>ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1825
Score = 166 bits (358), Expect(2) = 9e-049
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 447 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 626
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 627 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 770
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = -1 / -3
Query: 693 DVHVGAASVDGLEAVHDELLLERDDHVPLEDDPERLFVDDGVAEGALARVDRVVIARVGD 514
DVH+ AA+VDGL A +ELL E D H E DP+R + E A+ARV V +A VGD
Sbjct: 761 DVHLRAAAVDGLVAGDEELLREADHHGLGEGDPQRRRLHGAPPERAVARVGGVAVAGVGD 582
Query: 513 HVDL 502
VDL
Sbjct: 581 DVDL 570
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -2 / -1
Query: 506 ILPSRPPMALRPKPMPQSARRFRLLCQSESQRQQSSMGLPVPH 378
ILP PP+A RPKPM A RFR + QS QRQ S+G H
Sbjct: 574 ILPRTPPVAPRPKPMAHRASRFRSVAQSLRQRQHRSIGFVARH 446
Score = 51.5 bits (106), Expect(2) = 9e-049
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 771 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 890
Score = 33.1 bits (66), Expect(3) = 3e-023
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / -1
Query: 818 RHP*WLGELRTMAFPVGLQSWMWSPWMMTLVMYWMVMQAP 699
R P +GE RT + SW W M+TL W V+ AP
Sbjct: 889 RGPMCVGESRTAPPSLCFTSWTWRLVMITLRANWTVIPAP 770
>dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E18, full
insert sequence
Length = 1870
Score = 163 bits (351), Expect(2) = 2e-048
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = +1 / +1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC +W + RKRLA C +GFG A GG GKIY+VTD D+ V PR+G
Sbjct: 484 CTVTNPIDLCWRCRKNWASRRKRLAKCAMGFGHKATGGLAGKIYIVTDAGDEHLVIPRRG 663
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+AVI E PLWI+F R MVI L +ELI+ S KTIDGRGA VH+
Sbjct: 664 TLRHAVIQERPLWIVFARSMVIRLAKELIVTSDKTIDGRGAQVHV 798
Score = 53.3 bits (110), Expect(2) = 2e-048
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1 / +1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q ++NVIIH LHIH+ P ++R S H+G R
Sbjct: 802 GAQITVQAVSNVIIHNLHIHNSVPRSGGLIRDSMHHFGIR 921
>gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014424, whole
genome shotgun sequence
Length = 13752
Score = 114 bits (244), Expect(2) = 4e-043
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +1 / +1
Query: 556 GTLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANGACITIQYITNV 735
GTLR+ VI +EPLWIIF ++M+I LKE +++NS KTID RGA+V I NG +T+Q NV
Sbjct: 2815 GTLRWGVIQDEPLWIIFAKEMIINLKEGMMINSDKTIDRRGAHVRITNGVQVTVQNSNNV 2994
Query: 736 IIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
IIH +HIHD M+R S +G+R
Sbjct: 2995 IIHNIHIHDIVLGKLGMIRDSLEQFGFR 3078
Score = 84.9 bits (179), Expect(2) = 4e-043
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / +2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C PID C RC +DW +RKRLA C GFG N GG GK Y+VTD +DDD VNP +G
Sbjct: 2639 CKATYPIDRC*RCRTDWATDRKRLALCAQGFGLNTTGGLAGKFYLVTDGTDDDAVNPPRG 2818
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 113 bits (242), Expect(3) = 1e-042
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 6518550 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 6518371
Query: 559 TLRYAVIHEEPL 594
TLR+ + PL
Sbjct: 6518370 TLRWGAMQAAPL 6518335
Score = 51.5 bits (106), Expect(3) = 1e-042
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / -1
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 6518227 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 6518108
Score = 51.0 bits (105), Expect(3) = 1e-042
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 598 IIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
I F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 6518332 ITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 6518228
>gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003607, whole
genome shotgun sequence
Length = 8977
Score = 113 bits (242), Expect(3) = 1e-042
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 6900 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 7079
Query: 559 TLRYAVIHEEPL 594
TLR+ + PL
Sbjct: 7080 TLRWGAMQAAPL 7115
Score = 51.5 bits (106), Expect(3) = 1e-042
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 700 GACITIQYITNVIIHGLHIHDCKPTGNAMVRSSPSHYGWR 819
GA IT+Q+ NVII LH+HD K + VR SP+H G R
Sbjct: 7223 GAGITVQFARNVIITSLHVHDVKHSDGGAVRDSPTHIGPR 7342
Score = 51.0 bits (105), Expect(3) = 1e-042
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 598 IIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
I F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 7118 ITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 7222
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 171 bits (368), Expect = 9e-041
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 16246388 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 16246209
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 16246208 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 16246107
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 171 bits (368), Expect = 9e-041
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = +1 / -1
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 16254629 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 16254450
Query: 601 IFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
+F DM I L EEL++NS+KTIDGRGANVH+ G
Sbjct: 16254449 VFAGDMTIRLNEELLVNSYKTIDGRGANVHVGAG 16254348
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 166 bits (358), Expect = 2e-039
Identities = 67/108 (62%), Positives = 75/108 (69%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 6400493 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 6400314
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +EL++ S KTIDGRGA VHIA G
Sbjct: 6400313 TLRWGAMQAAPLWITFAKSMVIRLTQELLVASDKTIDGRGAQVHIARG 6400170
>gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0018O13f, DNA sequence
Length = 787
Score = 164 bits (353), Expect = 1e-038
Identities = 66/108 (61%), Positives = 75/108 (69%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 402 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 581
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHIANG 702
TLR+ + PLWI F + MVI L +E ++ S KTIDGRGA+VHIA G
Sbjct: 582 TLRWGAMXAAPLWITFAKSMVIRLTQEALVASDKTIDGRGAHVHIARG 725
>gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0025I06f, DNA sequence
Length = 714
Score = 158 bits (340), Expect = 7e-037
Identities = 64/105 (60%), Positives = 71/105 (67%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 399 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 578
Query: 559 TLRYAVIHEEPLWIIFKRDMVITLKEELIMNSFKTIDGRGANVHI 693
TLR+ + PLWI F + MVI L EL++ S KTID RGA VHI
Sbjct: 579 TLRWGAMQAAPLWITFAKSMVIRLTHELLVGSDKTIDWRGAQVHI 713
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 153 bits (328), Expect = 3e-035
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = +1 / -3
Query: 421 SDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKGTLRYAVIHEEPLWI 600
+DW +R+RLADCGIGFGRNA+GG+ G +YVVTDPSD DPVNP GTLRY I E PLWI
Sbjct: 15055743 TDWRQDRQRLADCGIGFGRNAMGGKGGPVYVVTDPSDGDPVNPAPGTLRYGAIQEGPLWI 15055564
Query: 601 IFKRDMVITLKEELIMNSFKTIDG 672
+F DM I L EEL++NS+KTIDG
Sbjct: 15055563 VFAGDMTIRLNEELLVNSYKTIDG 15055492
>dbj|AK072592.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D01, full
insert sequence
Length = 1238
Score = 109 bits (232), Expect(2) = 2e-025
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +1 / +3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDD 534
CGTGNPIDDCWRCD W +NR+RLADC +GFGR A+GG+ G++YVV D DD
Sbjct: 123 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD 278
Score = 34.1 bits (68), Expect(2) = 2e-025
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / +3
Query: 700 GACITIQYITNVIIHGLHIHDCKP 771
GAC ++ ++V+IHGL I C+P
Sbjct: 444 GACFAVRGASDVVIHGLTIRRCRP 515
>gb|AACV01011622.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011622, whole
genome shotgun sequence
Length = 32634
Score = 109 bits (232), Expect(2) = 5e-024
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +1 / -3
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDD 534
CGTGNPIDDCWRCD W +NR+RLADC +GFGR A+GG+ G++YVV D DD
Sbjct: 28651 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD 28496
Score = 34.1 bits (68), Expect(2) = 5e-024
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / -3
Query: 700 GACITIQYITNVIIHGLHIHDCKP 771
GAC ++ ++V+IHGL I C+P
Sbjct: 28330 GACFAVRGASDVVIHGLTIRRCRP 28259
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
OSJNBa0034M22, complete sequence
Length = 149435
Score = 109 bits (232), Expect(2) = 2e-023
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDD 534
CGTGNPIDDCWRCD W +NR+RLADC +GFGR A+GG+ G++YVV D DD
Sbjct: 102247 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD 102092
Score = 34.1 bits (68), Expect(2) = 2e-023
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 700 GACITIQYITNVIIHGLHIHDCKP 771
GAC ++ ++V+IHGL I C+P
Sbjct: 101926 GACFAVRGASDVVIHGLTIRRCRP 101855
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 113 bits (242), Expect = 2e-023
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDPVNPRKG 558
C NPID CWRC DW +RKRLA C +GFGR A GG GKIYVVTDP D D NPR G
Sbjct: 6518550 CLATNPIDRCWRCRKDWATDRKRLARCAMGFGRGATGGVRGKIYVVTDPGDGDAANPRYG 6518371
Query: 559 TLRYAVIHEEPL 594
TLR+ + PL
Sbjct: 6518370 TLRWGAMQAAPL 6518335
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 109 bits (232), Expect(2) = 3e-022
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +1 / -1
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDD 534
CGTGNPIDDCWRCD W +NR+RLADC +GFGR A+GG+ G++YVV D DD
Sbjct: 338326 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD 338171
Score = 34.1 bits (68), Expect(2) = 3e-022
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / -1
Query: 700 GACITIQYITNVIIHGLHIHDCKP 771
GAC ++ ++V+IHGL I C+P
Sbjct: 338005 GACFAVRGASDVVIHGLTIRRCRP 337934
>gb|CH401204.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000041
genomic scaffold, whole genome shotgun sequence
Length = 2540762
Score = 109 bits (232), Expect(2) = 3e-022
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = +1 / -2
Query: 379 CGTGNPIDDCWRCDSDWHNNRKRLADCGIGFGRNAIGGRDGKIYVVTDPSDD 534
CGTGNPIDDCWRCD W +NR+RLADC +GFGR A+GG+ G++YVV D DD
Sbjct: 355267 CGTGNPIDDCWRCDPGWADNRQRLADCAVGFGRRAVGGKGGRVYVVNDTGDD 355112
Score = 34.1 bits (68), Expect(2) = 3e-022
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1 / -2
Query: 700 GACITIQYITNVIIHGLHIHDCKP 771
GAC ++ ++V+IHGL I C+P
Sbjct: 354946 GACFAVRGASDVVIHGLTIRRCRP 354875
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,428,297,158
Number of Sequences: 438736
Number of extensions: 58943914
Number of successful extensions: 361611
Number of sequences better than 1.0e-020: 80
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 193316218653
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)