TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2655972.2.1
(666 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB675784.1|CB675784 OSJNEe11L12.r OSJNEe Oryza sativa (j... 245 4e-063
dbj|AK066744.1| Oryza sativa (japonica cultivar-group) cDNA... 245 4e-063
gb|AACV01002291.1| Oryza sativa (japonica cultivar-group) c... 245 4e-063
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 245 4e-063
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 245 4e-063
dbj|AP003560.2| Oryza sativa (japonica cultivar-group) geno... 245 4e-063
dbj|AP003309.3| Oryza sativa (japonica cultivar-group) geno... 245 4e-063
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 245 4e-063
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 245 4e-063
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 245 4e-063
ref|NM_191552.1| Oryza sativa (japonica cultivar-group), p... 243 2e-062
>gb|CB675784.1|CB675784 OSJNEe11L12.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11L12 3', mRNA sequence
Length = 805
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -3
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 521 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 342
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 341 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 162
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 161 HTETWS*L 138
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +1
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 133 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 312
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 313 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 492
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 493 LQPKKNRMG 519
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +2
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 140 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 319
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 320 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 499
Query: 53 QKRTE 39
Q+R E
Sbjct: 500 QRRIE 514
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -2
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 513 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 334
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 333 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 154
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 153 DLVIVMV 133
Score = 115 bits (246), Expect(2) = 4e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +3
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 252 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 431
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 432 PLVMGMSIPEVLV*KIIFLISTAKEE*N 515
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / -1
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 514 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 335
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 334 QECGIY 317
Score = 54.7 bits (113), Expect(2) = 4e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / -1
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 295 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 140
Score = 29.9 bits (59), Expect(2) = 4e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +3
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 141 L*PGLSVKFAVPF*FPEPYR 200
>dbj|AK066744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088B01, full
insert sequence
Length = 2441
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / +3
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 1572 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 1751
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 1752 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 1931
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 1932 HTETWS*L 1955
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / -2
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 1960 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 1781
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 1780 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 1601
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 1600 LQPKKNRMG 1574
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / -3
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 1953 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 1774
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 1773 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 1594
Query: 53 QKRTE 39
Q+R E
Sbjct: 1593 QRRIE 1579
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / +2
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 1580 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 1759
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 1760 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 1939
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 1940 DLVIVMV 1960
Score = 115 bits (246), Expect(2) = 4e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / -1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 1841 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 1662
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 1661 PLVMGMSIPEVLV*KIIFLISTAKEE*N 1578
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / +1
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 1579 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 1758
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 1759 QECGIY 1776
Score = 54.7 bits (113), Expect(2) = 4e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / +1
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 1798 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 1953
Score = 29.9 bits (59), Expect(2) = 4e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 1952 L*PGLSVKFAVPF*FPEPYR 1893
>gb|AACV01002291.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002291, whole
genome shotgun sequence
Length = 11657
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 7499 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 7320
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 7319 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 7140
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 7139 HTETWS*L 7116
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +1
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 7111 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 7290
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 7291 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 7470
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 7471 LQPKKNRMG 7497
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +2
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 7118 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 7297
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 7298 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 7477
Query: 53 QKRTE 39
Q+R E
Sbjct: 7478 QRRIE 7492
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 7491 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 7312
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 7311 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 7132
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 7131 DLVIVMV 7111
Score = 115 bits (246), Expect(2) = 4e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +3
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 7230 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 7409
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 7410 PLVMGMSIPEVLV*KIIFLISTAKEE*N 7493
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / -2
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 7492 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 7313
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 7312 QECGIY 7295
Score = 54.7 bits (113), Expect(2) = 4e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / -2
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 7273 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 7118
Score = 29.9 bits (59), Expect(2) = 4e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +3
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 7119 L*PGLSVKFAVPF*FPEPYR 7178
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 30668319 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 30668140
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 30668139 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 30667960
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 30667959 HTETWS*L 30667936
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +2
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 30667931 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 30668110
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 30668111 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 30668290
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 30668291 LQPKKNRMG 30668317
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +3
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 30667938 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 30668117
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 30668118 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 30668297
Query: 53 QKRTE 39
Q+R E
Sbjct: 30668298 QRRIE 30668312
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 30668311 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 30668132
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 30668131 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 30667952
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 30667951 DLVIVMV 30667931
Score = 115 bits (246), Expect = 5e-024
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 30668050 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 30668229
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 30668230 PLVMGMSIPEVLV*KIIFLISTAKEE*N 30668313
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 5115702 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 5115523
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 5115522 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 5115343
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 5115342 HTETWS*L 5115319
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +2
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 5115314 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 5115493
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 5115494 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 5115673
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 5115674 LQPKKNRMG 5115700
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +3
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 5115321 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 5115500
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 5115501 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 5115680
Query: 53 QKRTE 39
Q+R E
Sbjct: 5115681 QRRIE 5115695
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 5115694 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 5115515
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 5115514 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 5115335
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 5115334 DLVIVMV 5115314
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 5115433 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 5115612
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 5115613 PLVMGMSIPEVLV*KIIFLISTAKEE*N 5115696
Score = 80.8 bits (170), Expect(2) = 3e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / -2
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 5115695 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 5115516
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 5115515 QECGIY 5115498
Score = 54.7 bits (113), Expect(2) = 3e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / -2
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 5115476 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 5115321
Score = 29.9 bits (59), Expect(2) = 3e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +1
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 5115322 L*PGLSVKFAVPF*FPEPYR 5115381
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1060H01
Length = 157987
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 29926 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 29747
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 29746 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 29567
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 29566 HTETWS*L 29543
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +3
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 29538 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 29717
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 29718 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 29897
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 29898 LQPKKNRMG 29924
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +1
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 29545 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 29724
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 29725 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 29904
Query: 53 QKRTE 39
Q+R E
Sbjct: 29905 QRRIE 29919
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 29918 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 29739
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 29738 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 29559
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 29558 DLVIVMV 29538
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +2
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 29657 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 29836
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 29837 PLVMGMSIPEVLV*KIIFLISTAKEE*N 29920
Score = 80.8 bits (170), Expect(2) = 3e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / -2
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 29919 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 29740
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 29739 QECGIY 29722
Score = 54.7 bits (113), Expect(2) = 3e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / -2
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 29700 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 29545
Score = 29.9 bits (59), Expect(2) = 3e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +2
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 29546 L*PGLSVKFAVPF*FPEPYR 29605
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0036G09
Length = 124118
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 70253 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 70074
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 70073 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 69894
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 69893 HTETWS*L 69870
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +1
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 69865 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 70044
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 70045 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 70224
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 70225 LQPKKNRMG 70251
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +2
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 69872 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 70051
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 70052 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 70231
Query: 53 QKRTE 39
Q+R E
Sbjct: 70232 QRRIE 70246
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 70245 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 70066
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 70065 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 69886
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 69885 DLVIVMV 69865
Score = 115 bits (246), Expect(2) = 3e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +3
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 69984 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 70163
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 70164 PLVMGMSIPEVLV*KIIFLISTAKEE*N 70247
Score = 80.8 bits (170), Expect(2) = 3e-024
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / -2
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 70246 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 70067
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 70066 QECGIY 70049
Score = 54.7 bits (113), Expect(2) = 3e-024
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +3 / -2
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGHS 413
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GHS
Sbjct: 70027 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGHS 69872
Score = 29.9 bits (59), Expect(2) = 3e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / +3
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 69873 L*PGLSVKFAVPF*FPEPYR 69932
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 5024746 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 5024567
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 5024566 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 5024387
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 5024386 HTETWS*L 5024363
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +3
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 5024358 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 5024537
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 5024538 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 5024717
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 5024718 LQPKKNRMG 5024744
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +1
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 5024365 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 5024544
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 5024545 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 5024724
Query: 53 QKRTE 39
Q+R E
Sbjct: 5024725 QRRIE 5024739
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 5024738 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 5024559
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 5024558 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 5024379
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 5024378 DLVIVMV 5024358
Score = 115 bits (246), Expect = 5e-024
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +2
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 5024477 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 5024656
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 5024657 PLVMGMSIPEVLV*KIIFLISTAKEE*N 5024740
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 30226467 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 30226288
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 30226287 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 30226108
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 30226107 HTETWS*L 30226084
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +2
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 30226079 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 30226258
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 30226259 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 30226438
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 30226439 LQPKKNRMG 30226465
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +3
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 30226086 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 30226265
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 30226266 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 30226445
Query: 53 QKRTE 39
Q+R E
Sbjct: 30226446 QRRIE 30226460
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 30226459 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 30226280
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 30226279 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 30226100
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 30226099 DLVIVMV 30226079
Score = 115 bits (246), Expect = 5e-024
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 30226198 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 30226377
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 30226378 PLVMGMSIPEVLV*KIIFLISTAKEE*N 30226461
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 245 bits (529), Expect = 4e-063
Identities = 99/128 (77%), Positives = 111/128 (86%)
Frame = +2 / -1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 30587649 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 30587470
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 30587469 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 30587290
Query: 392 NIETWS*L 415
+ ETWS*L
Sbjct: 30587289 HTETWS*L 30587266
Score = 200 bits (431), Expect = 1e-049
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -1 / +2
Query: 420 HHNYDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASD 241
+HNYD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D
Sbjct: 30587261 YHNYDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPD 30587440
Query: 240 SNKFHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWF 61
+KFH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS F
Sbjct: 30587441 FSKFHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*F 30587620
Query: 60 LQPKKNRTG 34
LQPKKNR G
Sbjct: 30587621 LQPKKNRMG 30587647
Score = 132 bits (283), Expect = 4e-029
Identities = 65/125 (52%), Positives = 83/125 (66%)
Frame = -2 / +3
Query: 413 TMTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVI 234
TMT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T++
Sbjct: 30587268 TMTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLV 30587447
Query: 233 SSTVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYS 54
+ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYS
Sbjct: 30587448 NSTLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYS 30587627
Query: 53 QKRTE 39
Q+R E
Sbjct: 30587628 QRRIE 30587642
Score = 128 bits (274), Expect = 6e-028
Identities = 65/127 (51%), Positives = 77/127 (60%)
Frame = +1 / -3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 30587641 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 30587462
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 30587461 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 30587282
Query: 400 DMVIVVM 420
D+VIV++
Sbjct: 30587281 DLVIVMV 30587261
Score = 115 bits (246), Expect = 5e-024
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / +1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 30587380 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 30587559
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 30587560 PLVMGMSIPEVLV*KIIFLISTAKEE*N 30587643
>ref|NM_191552.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1911
Score = 243 bits (525), Expect = 2e-062
Identities = 98/127 (77%), Positives = 110/127 (86%)
Frame = +2 / +1
Query: 32 SPVLFFFGCRNQENDFLYKDFWLTHAQDEGVLSSKRGGGFFVAFSRDQPQKVYVQPKIKE 211
+P+LFFFGCRNQENDFLYKDFW HA D+GVLSSK GGGFFVAFSRDQPQKVYVQ +I+E
Sbjct: 1531 APILFFFGCRNQENDFLYKDFWYAHAHDQGVLSSKNGGGFFVAFSRDQPQKVYVQHRIRE 1710
Query: 212 QSSRLWNLLLSDAVIYIAGSSTKMPADVTAALEEVICKEGGVKQADASKWLRDLERAGRL 391
QS+R+WNLL S A IYIAGSSTKMPADVTAALEEVIC+E G + +AS WLR LER G+
Sbjct: 1711 QSARVWNLLKSGAAIYIAGSSTKMPADVTAALEEVICQETGCSEEEASIWLRKLERNGKF 1890
Query: 392 NIETWS* 412
+ ETWS*
Sbjct: 1891 HTETWS* 1911
Score = 193 bits (415), Expect = 2e-047
Identities = 92/126 (73%), Positives = 98/126 (77%)
Frame = -1 / -2
Query: 411 YDHVSMLSLPALSRSLSHFEASACLTPPSLQITSSSAAVTSAGIFVEEPAM*ITASDSNK 232
YD VS+ +LP LS LSH EAS+ P S QITSSSAAVTSAGI V+EPAM I A D +K
Sbjct: 1910 YDQVSV*NLPFLSSFLSHIEASSSEQPVS*QITSSSAAVTSAGILVDEPAMYIAAPDFSK 1731
Query: 231 FHSLELCSFILGCT*TFCG*SREKATKKPPPLFEDNTPSSCA*VSQKSLYRKSFSWFLQP 52
FH+L LCS IL CT*TF G*S EKATKKPPP FEDNTP S A* QKSLYRKSFS FLQP
Sbjct: 1730 FHTLALCSLILCCT*TF*G*SLEKATKKPPPFFEDNTPWSWA*AYQKSLYRKSFS*FLQP 1551
Query: 51 KKNRTG 34
KKNR G
Sbjct: 1550 KKNRMG 1533
Score = 130 bits (278), Expect = 2e-028
Identities = 64/124 (51%), Positives = 82/124 (66%)
Frame = -2 / -3
Query: 410 MTMSRC*VYQPFLDP*AISKHPLA*HHLLYK*PPLAQL*HRQAFSSKSLQCRSLHRTVIS 231
MT S+C + + FL *AIS+ PL + L +* QL*H+ AF SLQC +T+++
Sbjct: 1909 MTRSQCEICRSFLVS*AISRLPLLNNRFLDR*LLPVQL*HQLAFW*TSLQCILQPQTLVN 1730
Query: 230 STVLNSVPLSWVARRPFAADPGKKRRRNHRPFSRTTPPHPAHELARNPCIENRFLGFYSQ 51
ST+L+S PLS A R F AD K+++RNHR FSRT PP HE R+PCIEN FL FYSQ
Sbjct: 1729 STLLHSAPLSCAAHRLFEADL*KRQQRNHRHFSRTIPPGHGHEHTRSPCIENHFLDFYSQ 1550
Query: 50 KRTE 39
+R E
Sbjct: 1549 RRIE 1538
Score = 125 bits (268), Expect = 4e-027
Identities = 64/124 (51%), Positives = 74/124 (59%)
Frame = +1 / +3
Query: 40 SVLFWL*KPRKRFSIQGFLANSCAG*GGVVLEKGRWFLRRFFPGSAAKGLRATQDKGTEF 219
S+L WL*K RK FSIQG L SC GG+VLEK RWFL F SA+K L A QDKG E
Sbjct: 1539 SILLWL*KSRK*FSIQGLLVCSCP*PGGIVLEKWRWFLCCLF*RSASKSLCAAQDKGAEC 1718
Query: 220 KTVELITVRCSDLHCRLFDENACRCYSCARGGYL*RRWCQASGCFEMAQGSRKGW*T*HR 399
K+VE V ++HCRL +NA CYSC YL R G +MAQ +RK H
Sbjct: 1719 KSVEFTKVWGCNIHCRLVYQNAS*CYSCTGRSYLSRNRLFRRGSLDMAQETRKERQISH* 1898
Query: 400 DMVI 411
D+VI
Sbjct: 1899 DLVI 1910
Score = 115 bits (246), Expect(2) = 4e-027
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -3 / -1
Query: 301 SCNIGRHFRRRACNVDHCIGQ**VPQS*TLFLYLGLHVDLLRLIPGKSDEETTAPFRGQH 122
SCNI HF RRACNV **+P S TL Y LH+D LRLI K ++ETTA FRGQ+
Sbjct: 1800 SCNISWHFGRRACNVYCSPRL**IPHSCTLLPYPVLHIDFLRLISRKGNKETTAIFRGQY 1621
Query: 121 PLILRMS*PEILV*KIVFLVSTAKKEQN 38
PL++ MS PE+LV*KI+FL+STAK+E N
Sbjct: 1620 PLVMGMSIPEVLV*KIIFLISTAKEE*N 1537
Score = 80.8 bits (170), Expect(2) = 1e-023
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3 / +2
Query: 39 FCSFLAVETKKTIFYTRISG*LMRRMRGCCPRKGAVVSSSLFPGISRKRSTCNPR*RNRV 218
F S LAVE KK IFYTR SG LM RG CPRK AVVS F IS K+S C+ * +RV
Sbjct: 1538 FYSSLAVEIKKMIFYTRTSGMLMPMTRGYCPRKMAVVSLLPFLEISLKKSMCSTG*GSRV 1717
Query: 219 QDCGTY 236
Q+CG Y
Sbjct: 1718 QECGIY 1735
Score = 52.8 bits (109), Expect(2) = 1e-023
Identities = 28/51 (54%), Positives = 31/51 (60%)
Frame = +3 / +2
Query: 258 TLQALRRKCLPMLQLR*RRLFVKKVVSSKRMLRNGSGI*KGLVDLTSRHGH 410
TLQA KC MLQL ++L VKK V KR R GSG *KG + T R GH
Sbjct: 1757 TLQARLPKCQLMLQLHWKKLSVKKPVVQKRKPRYGSGN*KGTANFTLRPGH 1909
Score = 29.9 bits (59), Expect(2) = 4e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 412 L*PCLDVKSTSPF*IPEPFR 353
L*P L VK PF* PEP+R
Sbjct: 1911 L*PGLSVKFAVPF*FPEPYR 1852
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,822,503,978
Number of Sequences: 438736
Number of extensions: 79450535
Number of successful extensions: 405984
Number of sequences better than 1.0e-020: 15
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 147029236722
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)