TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647051.2.1
(627 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_470129.1| Oryza sativa (japonica cultivar-group), mRNA 84 2e-032
dbj|AK061390.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-032
dbj|AK104791.1| Oryza sativa (japonica cultivar-group) cDNA... 84 2e-032
gb|CB656535.1|CB656535 OSJNEc10P22.f OSJNEc Oryza sativa (j... 84 2e-032
gb|CB656536.1|CB656536 OSJNEc10P22.r OSJNEc Oryza sativa (j... 84 2e-032
gb|CB679371.1|CB679371 OSJNEf02M17.f OSJNEf Oryza sativa (j... 84 2e-032
gb|CB679372.1|CB679372 OSJNEf02M17.r OSJNEf Oryza sativa (j... 84 2e-032
gb|AU089819.1|AU089819 AU089819 Rice green shoot Oryza sati... 79 3e-030
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 79 7e-030
gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 gen... 79 7e-030
gb|AF474922.1| Oryza sativa chalcone isomerase (Cfi) gene, ... 79 5e-029
gb|AACV01008175.1| Oryza sativa (japonica cultivar-group) c... 79 3e-023
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 79 1e-020
>ref|XM_470129.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 916
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / +3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 465 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 596
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +3
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 603 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 779
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / -1
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 613 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 464
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -1
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 718 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 602
>dbj|AK061390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C05, full
insert sequence
Length = 877
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / +1
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 439 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 570
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +1
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 577 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 753
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / -3
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 587 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 438
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -3
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 692 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 576
>dbj|AK104791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F07, full
insert sequence
Length = 834
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / +1
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 409 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 540
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +1
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 547 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 723
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / -2
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 557 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 408
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -2
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 662 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 546
>gb|CB656535.1|CB656535 OSJNEc10P22.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10P22 5', mRNA sequence
Length = 806
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / +3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 396 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 527
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +3
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 534 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 710
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / -2
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 544 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 395
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -2
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 649 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 533
>gb|CB656536.1|CB656536 OSJNEc10P22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10P22 3', mRNA sequence
Length = 789
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / -3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 496 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 365
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 358 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 182
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / +3
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 348 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 497
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / +3
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 243 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 359
>gb|CB679371.1|CB679371 OSJNEf02M17.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02M17 5', mRNA sequence
Length = 782
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / +2
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 395 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 526
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 533 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 709
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / -3
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 543 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 394
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / -3
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 648 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 532
>gb|CB679372.1|CB679372 OSJNEf02M17.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02M17 3', mRNA sequence
Length = 737
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2 / -3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
EG A +KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 444 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 313
Score = 79.4 bits (167), Expect(2) = 2e-032
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 306 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 130
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 32/50 (64%), Positives = 35/50 (70%)
Frame = -1 / +2
Query: 150 ATPPAAGTDESLEKATVRTPAVECVKRMEAPGAKVSGLNTSLNFSTATPS 1
A +GTDESLE ATVRTP E VKRM+APG K+ GL SLN S A PS
Sbjct: 296 AATAPSGTDESLENATVRTPGGEWVKRMDAPGGKLWGLKASLNLSAAAPS 445
Score = 56.5 bits (117), Expect(2) = 8e-022
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -1 / +2
Query: 249 DTLAARLSFAAGDTPRSPMMDSSTASQRRLFSIATPPAA 133
+T AA L FAAG+TP SPMM+SSTASQ LFSIA A
Sbjct: 191 ETRAAMLRFAAGETPCSPMMESSTASQSALFSIAAAATA 307
>gb|AU089819.1|AU089819 AU089819 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16470, mRNA sequence
Length = 466
Score = 79.4 bits (167), Expect(2) = 3e-030
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 125 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 301
Score = 76.7 bits (161), Expect(2) = 3e-030
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = +2 / +2
Query: 17 EKFREVFKPETFAPGASILFTHSTAGVLTVAFSKDSSVP 133
+KF+E FKP +F PGASILFTHS GVLTVAFSKDSSVP
Sbjct: 2 DKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVP 118
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 79.4 bits (167), Expect(3) = 7e-030
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 747329 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 747153
Score = 63.8 bits (133), Expect(3) = 7e-030
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2 / -2
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVA 109
EG A +KF+E FKP +F PGASILFTHS GVLTV+
Sbjct: 747548 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVS 747441
Score = 29.0 bits (57), Expect(3) = 7e-030
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 106 RLLQGLVGAGGRRRG 150
R+LQGLVGA GRR G
Sbjct: 747363 RVLQGLVGARGRRGG 747319
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
sequence
Length = 163828
Score = 79.4 bits (167), Expect(3) = 7e-030
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 54734 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 54558
Score = 63.8 bits (133), Expect(3) = 7e-030
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2 / -3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVA 109
EG A +KF+E FKP +F PGASILFTHS GVLTV+
Sbjct: 54953 EGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVS 54846
Score = 29.0 bits (57), Expect(3) = 7e-030
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / -2
Query: 106 RLLQGLVGAGGRRRG 150
R+LQGLVGA GRR G
Sbjct: 54768 RVLQGLVGARGRRGG 54724
>gb|AF474922.1| Oryza sativa chalcone isomerase (Cfi) gene, complete cds
Length = 2479
Score = 79.4 bits (167), Expect(3) = 5e-029
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 1784 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 1960
Score = 61.1 bits (127), Expect(3) = 5e-029
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 2 EGVAVEKFREVFKPETFAPGASILFTHSTAGVLTVA 109
EG A +K +E FKP +F PGASILFTHS GVLTV+
Sbjct: 1566 EGAAADKLKEAFKPHSFPPGASILFTHSPPGVLTVS 1673
Score = 29.0 bits (57), Expect(3) = 5e-029
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 106 RLLQGLVGAGGRRRG 150
R+LQGLVGA GRR G
Sbjct: 1750 RVLQGLVGARGRRGG 1794
>gb|AACV01008175.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008175,
whole genome shotgun sequence
Length = 5641
Score = 79.4 bits (167), Expect(3) = 3e-023
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -1
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 430 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 254
Score = 44.1 bits (90), Expect(3) = 3e-023
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / -3
Query: 26 REVFKPETFAPGASILFTHSTAGVLTVA 109
R +P +F PGASILFTHS GVLTV+
Sbjct: 626 RRPSRPHSFPPGASILFTHSPPGVLTVS 543
Score = 26.3 bits (51), Expect(3) = 3e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 98 LTVAFSKDSSVP 133
L VAFSKDSSVP
Sbjct: 473 LQVAFSKDSSVP 438
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 79.4 bits (167), Expect(2) = 1e-020
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 134 AAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELLAKETAAPADAPQAEPVS 310
A AIEN+ LCEAVL+SIIGE GVSPAAK S+AARVS+LL E+ A + PVS
Sbjct: 7770149 AVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAESTGDVAAAEPAPVS 7769973
Score = 44.1 bits (90), Expect(2) = 1e-020
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 26 REVFKPETFAPGASILFTHSTAGVLTVA 109
R +P +F PGASILFTHS GVLTV+
Sbjct: 7770345 RRPSRPHSFPPGASILFTHSPPGVLTVS 7770262
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,883,090,098
Number of Sequences: 438736
Number of extensions: 40192825
Number of successful extensions: 533908
Number of sequences better than 1.0e-020: 16
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 136203992550
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)