TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594433.2.1
(766 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB111916.1| Oryza sativa (japonica cultivar-group) OsRP... 328 4e-088
dbj|AK060582.1| Oryza sativa (japonica cultivar-group) cDNA... 328 4e-088
gb|AACV01006099.1| Oryza sativa (japonica cultivar-group) c... 139 3e-074
gb|AC135158.2| Oryza sativa (japonica cultivar-group) chrom... 139 2e-073
gb|AC134241.2| Oryza sativa (japonica cultivar-group) chrom... 139 2e-073
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 139 4e-071
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 139 2e-069
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-052
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 139 4e-052
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 139 4e-052
gb|AQ396394.2|AQ396394 nbxb0067P07r CUGI Rice BAC Library O... 90 3e-034
>dbj|AB111916.1| Oryza sativa (japonica cultivar-group) OsRPA70b mRNA for replication
protein A 70b, complete cds
Length = 1928
Score = 328 bits (711), Expect = 4e-088
Identities = 127/147 (86%), Positives = 140/147 (95%)
Frame = -1 / +2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLRYIMV+KVSDPTGEAW+S+
Sbjct: 1460 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSL 1639
Query: 556 FNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
FN+ AE+I+GCSADELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRIT
Sbjct: 1640 FNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRIT 1819
Query: 376 VRSEAPVEHAAESKYLLEQIAKLTAC* 296
VRSEAPV+HAAE+KY+LE+IAKLT C*
Sbjct: 1820 VRSEAPVDHAAEAKYMLEEIAKLTGC* 1900
Score = 227 bits (491), Expect = 9e-058
Identities = 106/149 (71%), Positives = 108/149 (72%)
Frame = +3 / -3
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFRAX 476
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 1899 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLRR* 1720
Query: 477 XXXXXXXXXXXXXXXXQPMIFSACSLNTETHASPVGSETLTTMMYLSEHSESFFWHPSHQ 656
QP I SA SLN E+ ASPVGSETL TMMYLSEHS SFFWHPSHQ
Sbjct: 1719 LSSPSSFLIRSSSSALQPTILSA*SLNRESQASPVGSETLMTMMYLSEHSASFFWHPSHQ 1540
Query: 657 YPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 1539 YPDPIASVTFLLQVLQARYHMVWSGLIRL 1453
Score = 214 bits (462), Expect = 9e-054
Identities = 94/149 (63%), Positives = 113/149 (75%)
Frame = +2 / -2
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 1906 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 1727
Query: 470 SITVVPLLFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ*AFRVILLASL 649
+TV+ LL P+PIKLV AAN+ LC+++E R P L SR+GDLDDHDV Q*A +ILLA
Sbjct: 1726 KVTVITLLLPNPIKLVCTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPQ*ALSIILLAPF 1547
Query: 650 APVSRSKSFSHLLVAGLASTVPHVLVRLE 736
PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 1546 TPVS*SNCLSHLLVAGLASSVPHGLVRLD 1460
Score = 195 bits (420), Expect = 6e-048
Identities = 95/146 (65%), Positives = 111/146 (76%)
Frame = -3 / +1
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEIHHGRQGLRSYWRGMGLCV 555
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+HHG QGLR YW G+ V
Sbjct: 1462 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEVHHGHQGLRPYW*GLAFSV 1641
Query: 554 QRACREDHWLQRRRA*SDQERGGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHC 375
Q + RED WLQ RRA*SD E GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HC
Sbjct: 1642 Q*SGREDCWLQCRRA*SD*EGGG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHC 1821
Query: 374 EE*SAGRARS*IQVPA*TDSEAYCLL 297
EE*S+GR RS* QV A DS+A LL
Sbjct: 1822 EE*SSGRPRS*SQVHARGDSQADRLL 1899
Score = 152 bits (327), Expect = 4e-035
Identities = 80/138 (57%), Positives = 90/138 (65%)
Frame = -2 / +3
Query: 744 ISXSSLTRTCGTVLARPAXXXXXXXXXXXTGARDAKRMTRNAH*DTSWSSRSPILLARHG 565
++ SSLT+ CGT LARPA TG + A+RM +AH* TSWSSRSP LL R G
Sbjct: 1452 LALSSLTKPCGTELARPATRR*LRQLDQDTGVKGARRMMLSAH*GTSWSSRSPTLLVRPG 1631
Query: 564 SLCSTSMQRRSLAAAPTSLIGSGKRRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGR 385
LCS QR LAA TSLIG G+RR TV S RK GFLTCSASA M+T R+GR
Sbjct: 1632 FLCSMIRQRGLLAAVQTSLIGLGRRRVMTVTFSS*RKLLGFLTCSASA*LRMST*MRRGR 1811
Query: 384 ESL*GVKRRSSTQLNPST 331
SL*GVK R +TQL PST
Sbjct: 1812 GSL*GVKLR*TTQLKPST 1865
Score = 102 bits (218), Expect(2) = 3e-032
Identities = 51/78 (65%), Positives = 55/78 (70%)
Frame = +1 / -1
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 1886 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 1707
Query: 490 PLS*SDQARRRCSQ*SSL 543
P S*SDQAR CSQ SSL
Sbjct: 1706 PPS*SDQARLHCSQQSSL 1653
Score = 60.2 bits (125), Expect(2) = 3e-032
Identities = 28/42 (66%), Positives = 28/42 (66%)
Frame = +1 / -1
Query: 604 *CISVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
*C SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 1592 *CTSVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 1467
>dbj|AK060582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H05, full
insert sequence
Length = 2221
Score = 328 bits (711), Expect = 4e-088
Identities = 127/147 (86%), Positives = 140/147 (95%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLRYIMV+KVSDPTGEAW+S+
Sbjct: 1542 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSL 1721
Query: 556 FNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
FN+ AE+I+GCSADELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRIT
Sbjct: 1722 FNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRIT 1901
Query: 376 VRSEAPVEHAAESKYLLEQIAKLTAC* 296
VRSEAPV+HAAE+KY+LE+IAKLT C*
Sbjct: 1902 VRSEAPVDHAAEAKYMLEEIAKLTGC* 1982
Score = 227 bits (491), Expect = 9e-058
Identities = 106/149 (71%), Positives = 108/149 (72%)
Frame = +3 / -1
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFRAX 476
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 1981 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLRR* 1802
Query: 477 XXXXXXXXXXXXXXXXQPMIFSACSLNTETHASPVGSETLTTMMYLSEHSESFFWHPSHQ 656
QP I SA SLN E+ ASPVGSETL TMMYLSEHS SFFWHPSHQ
Sbjct: 1801 LSSPSSFLIRSSSSALQPTILSA*SLNRESQASPVGSETLMTMMYLSEHSASFFWHPSHQ 1622
Query: 657 YPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 1621 YPDPIASVTFLLQVLQARYHMVWSGLIRL 1535
Score = 214 bits (461), Expect = 1e-053
Identities = 93/149 (62%), Positives = 113/149 (75%)
Frame = +2 / -3
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 1988 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 1809
Query: 470 SITVVPLLFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ*AFRVILLASL 649
+TV+ LL P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV Q*A +ILLA
Sbjct: 1808 KVTVITLLLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPQ*ALSIILLAPF 1629
Query: 650 APVSRSKSFSHLLVAGLASTVPHVLVRLE 736
PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 1628 TPVS*SNCLSHLLVAGLASSVPHGLVRLD 1542
Score = 191 bits (411), Expect = 1e-046
Identities = 94/146 (64%), Positives = 110/146 (75%)
Frame = -3 / +2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEIHHGRQGLRSYWRGMGLCV 555
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+HHG QGLR YW G+ V
Sbjct: 1544 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEVHHGHQGLRPYW*GLAFSV 1723
Query: 554 QRACREDHWLQRRRA*SDQERGGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHC 375
Q + RED WLQ R A*SD E GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HC
Sbjct: 1724 Q*SGREDCWLQCR*A*SD*EGGG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHC 1903
Query: 374 EE*SAGRARS*IQVPA*TDSEAYCLL 297
EE*S+GR RS* QV A DS+A LL
Sbjct: 1904 EE*SSGRPRS*SQVHARGDSQADRLL 1981
Score = 149 bits (321), Expect = 3e-034
Identities = 79/138 (57%), Positives = 89/138 (64%)
Frame = -2 / +1
Query: 744 ISXSSLTRTCGTVLARPAXXXXXXXXXXXTGARDAKRMTRNAH*DTSWSSRSPILLARHG 565
++ SSLT+ CGT LARPA TG + A+RM +AH* TSWSSRSP LL R G
Sbjct: 1534 LALSSLTKPCGTELARPATRR*LRQLDQDTGVKGARRMMLSAH*GTSWSSRSPTLLVRPG 1713
Query: 564 SLCSTSMQRRSLAAAPTSLIGSGKRRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGR 385
LCS QR LAA SLIG G+RR TV S RK GFLTCSASA M+T R+GR
Sbjct: 1714 FLCSMIRQRGLLAAVQMSLIGLGRRRVMTVTFSS*RKLLGFLTCSASA*LRMST*MRRGR 1893
Query: 384 ESL*GVKRRSSTQLNPST 331
SL*GVK R +TQL PST
Sbjct: 1894 GSL*GVKLR*TTQLKPST 1947
Score = 100 bits (213), Expect(2) = 1e-031
Identities = 50/78 (64%), Positives = 54/78 (69%)
Frame = +1 / -2
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 1968 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 1789
Query: 490 PLS*SDQARRRCSQ*SSL 543
P S*SDQA CSQ SSL
Sbjct: 1788 PPS*SDQAHLHCSQQSSL 1735
Score = 60.2 bits (125), Expect(2) = 1e-031
Identities = 28/42 (66%), Positives = 28/42 (66%)
Frame = +1 / -2
Query: 604 *CISVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
*C SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 1674 *CTSVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 1549
>gb|AACV01006099.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006099, whole
genome shotgun sequence
Length = 43449
Score = 139 bits (299), Expect(3) = 3e-074
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 37426 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 37605
Query: 313 KLTAC* 296
KLT C*
Sbjct: 37606 KLTGC* 37623
Score = 107 bits (228), Expect(3) = 3e-074
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 36884 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 37009
Score = 100 bits (213), Expect(3) = 2e-052
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +3 / -1
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHS SFFWHPSHQYPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 37011 YLSEHSASFFWHPSHQYPDPIASVTFLLQVLQARYHMVWSGLIRL 36877
Score = 96.4 bits (204), Expect(3) = 2e-052
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / -1
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 37629 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 37450
Query: 470 SITVVPLL 493
+TV+ LL
Sbjct: 37449 KVTVITLL 37426
Score = 92.7 bits (196), Expect(4) = 1e-034
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3 / -2
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFR 470
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 37622 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLR 37449
Score = 90.4 bits (191), Expect(3) = 3e-074
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1 / +1
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
RYIMV+KVSDPTGEAW+S+FN+ AE+I+GCSADELDRIRKE
Sbjct: 37096 RYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE 37218
Score = 81.7 bits (172), Expect(3) = 1e-034
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HCEE*S+GR RS* QV A DS+
Sbjct: 37428 GG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHCEE*SSGRPRS*SQVHARGDSQ 37607
Query: 311 AYCLL 297
A LL
Sbjct: 37608 ADRLL 37622
Score = 79.9 bits (168), Expect(2) = 6e-023
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +1 / -3
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 37609 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 37430
Query: 490 P 492
P
Sbjct: 37429 P 37427
Score = 67.0 bits (140), Expect(3) = 2e-052
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2 / -1
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV +
Sbjct: 37218 LLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPE 37093
Score = 62.0 bits (129), Expect(3) = 1e-034
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+
Sbjct: 36886 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEV 37011
Score = 60.2 bits (125), Expect(3) = 1e-034
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 626 GMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
G ++HHG QGLR YW G+ VQ + RED WLQ R A*SD E G
Sbjct: 37083 GSFLQVHHGHQGLRPYW*GLAFSVQ*SGREDCWLQCR*A*SD*EGG 37220
Score = 59.7 bits (124), Expect(2) = 6e-023
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2 / -3
Query: 575 ASRIGDLDDHDVSQ*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+S G + + Q*A +ILLA PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 37045 SSMHGVIQPKVLPQ*ALSIILLAPFTPVS*SNCLSHLLVAGLASSVPHGLVRLD 36884
Score = 56.1 bits (116), Expect(4) = 1e-034
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +1 / -2
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 37007 SVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 36891
Score = 51.9 bits (107), Expect(4) = 1e-034
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -2
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QP I SA SLN E+ ASPVGSETL TMMYL +
Sbjct: 37184 QPTILSA*SLNRESQASPVGSETLMTMMYLKK 37089
Score = 26.7 bits (52), Expect(4) = 1e-034
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1 / -3
Query: 490 PLS*SDQARRRCSQ*SSL 543
P S*SDQA CSQ SSL
Sbjct: 37219 PPS*SDQAHLHCSQQSSL 37166
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
complete sequence
Length = 111961
Score = 139 bits (299), Expect(3) = 2e-073
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 9400 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 9579
Query: 313 KLTAC* 296
KLT C*
Sbjct: 9580 KLTGC* 9597
Score = 107 bits (228), Expect(3) = 2e-073
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 8858 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 8983
Score = 100 bits (213), Expect(3) = 1e-051
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +3 / -2
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHS SFFWHPSHQYPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 8985 YLSEHSASFFWHPSHQYPDPIASVTFLLQVLQARYHMVWSGLIRL 8851
Score = 96.4 bits (204), Expect(3) = 1e-051
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / -2
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 9603 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 9424
Query: 470 SITVVPLL 493
+TV+ LL
Sbjct: 9423 KVTVITLL 9400
Score = 92.7 bits (196), Expect(3) = 7e-033
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3 / -3
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFR 470
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 9596 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLR 9423
Score = 90.4 bits (191), Expect(3) = 2e-073
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1 / +1
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
RYIMV+KVSDPTGEAW+S+FN+ AE+I+GCSADELDRIRKE
Sbjct: 9070 RYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE 9192
Score = 81.7 bits (172), Expect(3) = 8e-034
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HCEE*S+GR RS* QV A DS+
Sbjct: 9402 GG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHCEE*SSGRPRS*SQVHARGDSQ 9581
Query: 311 AYCLL 297
A LL
Sbjct: 9582 ADRLL 9596
Score = 79.9 bits (168), Expect(2) = 2e-022
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +1 / -1
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 9583 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 9404
Query: 490 P 492
P
Sbjct: 9403 P 9401
Score = 67.0 bits (140), Expect(3) = 1e-051
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2 / -2
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV +
Sbjct: 9192 LLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPE 9067
Score = 62.0 bits (129), Expect(3) = 8e-034
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+
Sbjct: 8860 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEV 8985
Score = 60.2 bits (125), Expect(3) = 8e-034
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 626 GMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
G ++HHG QGLR YW G+ VQ + RED WLQ R A*SD E G
Sbjct: 9057 GSFLQVHHGHQGLRPYW*GLAFSVQ*SGREDCWLQCR*A*SD*EGG 9194
Score = 59.7 bits (124), Expect(2) = 2e-022
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2 / -1
Query: 575 ASRIGDLDDHDVSQ*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+S G + + Q*A +ILLA PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 9019 SSMHGVIQPKVLPQ*ALSIILLAPFTPVS*SNCLSHLLVAGLASSVPHGLVRLD 8858
Score = 56.1 bits (116), Expect(3) = 7e-033
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +1 / -3
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 8981 SVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 8865
Score = 51.9 bits (107), Expect(3) = 7e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -3
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QP I SA SLN E+ ASPVGSETL TMMYL +
Sbjct: 9158 QPTILSA*SLNRESQASPVGSETLMTMMYLKK 9063
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02,
complete sequence
Length = 128535
Score = 139 bits (299), Expect(3) = 2e-073
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +2
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 100487 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 100666
Query: 313 KLTAC* 296
KLT C*
Sbjct: 100667 KLTGC* 100684
Score = 107 bits (228), Expect(3) = 2e-073
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 99945 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 100070
Score = 100 bits (213), Expect(3) = 2e-051
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +3 / -3
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHS SFFWHPSHQYPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 100072 YLSEHSASFFWHPSHQYPDPIASVTFLLQVLQARYHMVWSGLIRL 99938
Score = 96.4 bits (204), Expect(3) = 2e-051
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / -3
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 100690 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 100511
Query: 470 SITVVPLL 493
+TV+ LL
Sbjct: 100510 KVTVITLL 100487
Score = 92.7 bits (196), Expect(3) = 9e-033
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3 / -1
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFR 470
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 100683 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLR 100510
Score = 90.4 bits (191), Expect(3) = 2e-073
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1 / +2
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
RYIMV+KVSDPTGEAW+S+FN+ AE+I+GCSADELDRIRKE
Sbjct: 100157 RYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE 100279
Score = 81.7 bits (172), Expect(3) = 1e-033
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +1
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HCEE*S+GR RS* QV A DS+
Sbjct: 100489 GG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHCEE*SSGRPRS*SQVHARGDSQ 100668
Query: 311 AYCLL 297
A LL
Sbjct: 100669 ADRLL 100683
Score = 79.9 bits (168), Expect(2) = 2e-022
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +1 / -2
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 100670 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 100491
Query: 490 P 492
P
Sbjct: 100490 P 100488
Score = 67.0 bits (140), Expect(3) = 2e-051
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2 / -3
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV +
Sbjct: 100279 LLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPE 100154
Score = 62.0 bits (129), Expect(3) = 1e-033
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+
Sbjct: 99947 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEV 100072
Score = 60.2 bits (125), Expect(3) = 1e-033
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +1
Query: 626 GMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
G ++HHG QGLR YW G+ VQ + RED WLQ R A*SD E G
Sbjct: 100144 GSFLQVHHGHQGLRPYW*GLAFSVQ*SGREDCWLQCR*A*SD*EGG 100281
Score = 59.7 bits (124), Expect(2) = 2e-022
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2 / -2
Query: 575 ASRIGDLDDHDVSQ*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+S G + + Q*A +ILLA PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 100106 SSMHGVIQPKVLPQ*ALSIILLAPFTPVS*SNCLSHLLVAGLASSVPHGLVRLD 99945
Score = 56.1 bits (116), Expect(3) = 9e-033
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +1 / -1
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 100068 SVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 99952
Score = 51.9 bits (107), Expect(3) = 9e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -1
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QP I SA SLN E+ ASPVGSETL TMMYL +
Sbjct: 100245 QPTILSA*SLNRESQASPVGSETLMTMMYLKK 100150
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 139 bits (299), Expect(3) = 4e-071
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 1114411 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 1114590
Query: 313 KLTAC* 296
KLT C*
Sbjct: 1114591 KLTGC* 1114608
Score = 107 bits (228), Expect(3) = 4e-071
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 1113869 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 1113994
Score = 100 bits (213), Expect(3) = 4e-049
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +3 / -3
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHS SFFWHPSHQYPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 1113996 YLSEHSASFFWHPSHQYPDPIASVTFLLQVLQARYHMVWSGLIRL 1113862
Score = 96.4 bits (204), Expect(3) = 4e-049
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / -3
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 1114614 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 1114435
Query: 470 SITVVPLL 493
+TV+ LL
Sbjct: 1114434 KVTVITLL 1114411
Score = 92.7 bits (196), Expect(3) = 2e-030
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3 / -1
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFR 470
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 1114607 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLR 1114434
Score = 90.4 bits (191), Expect(3) = 4e-071
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1 / +1
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
RYIMV+KVSDPTGEAW+S+FN+ AE+I+GCSADELDRIRKE
Sbjct: 1114081 RYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE 1114203
Score = 81.7 bits (172), Expect(3) = 2e-031
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +3
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HCEE*S+GR RS* QV A DS+
Sbjct: 1114413 GG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHCEE*SSGRPRS*SQVHARGDSQ 1114592
Query: 311 AYCLL 297
A LL
Sbjct: 1114593 ADRLL 1114607
Score = 79.9 bits (168), Expect(2) = 3e-021
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = +1 / -2
Query: 310 ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPP 489
A LS +A TW+QLR P LHSSQ* SA S C H+ R*RGTGEEP+ LP A E NC P
Sbjct: 1114594 AWLSPRACTWLQLRGLPELHSSQ*SSASSHSCTHSELR*RGTGEEPK*LPSA*EGNCHHP 1114415
Query: 490 P 492
P
Sbjct: 1114414 P 1114412
Score = 67.0 bits (140), Expect(3) = 4e-049
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2 / -3
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV +
Sbjct: 1114203 LLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPE 1114078
Score = 62.0 bits (129), Expect(3) = 2e-031
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +1
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+
Sbjct: 1113871 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEV 1113996
Score = 60.2 bits (125), Expect(3) = 2e-031
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +3
Query: 626 GMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
G ++HHG QGLR YW G+ VQ + RED WLQ R A*SD E G
Sbjct: 1114068 GSFLQVHHGHQGLRPYW*GLAFSVQ*SGREDCWLQCR*A*SD*EGG 1114205
Score = 59.7 bits (124), Expect(2) = 3e-021
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +2 / -2
Query: 575 ASRIGDLDDHDVSQ*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+S G + + Q*A +ILLA PVS S SHLLVAGLAS+VPH LVRL+
Sbjct: 1114030 SSMHGVIQPKVLPQ*ALSIILLAPFTPVS*SNCLSHLLVAGLASSVPHGLVRLD 1113869
Score = 56.1 bits (116), Expect(3) = 2e-030
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +1 / -1
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 1113992 SVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 1113876
Score = 51.9 bits (107), Expect(3) = 2e-030
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -1
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QP I SA SLN E+ ASPVGSETL TMMYL +
Sbjct: 1114169 QPTILSA*SLNRESQASPVGSETLMTMMYLKK 1114074
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 139 bits (299), Expect(3) = 2e-069
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +3
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 5984481 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 5984660
Query: 313 KLTAC* 296
KLT C*
Sbjct: 5984661 KLTGC* 5984678
Score = 107 bits (228), Expect(3) = 2e-069
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 5983939 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 5984064
Score = 100 bits (213), Expect(3) = 2e-047
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +3 / -2
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHS SFFWHPSHQYPDP SVTFLLQVLQARYHM WSGL L
Sbjct: 5984066 YLSEHSASFFWHPSHQYPDPIASVTFLLQVLQARYHMVWSGLIRL 5983932
Score = 96.4 bits (204), Expect(3) = 2e-047
Identities = 41/68 (60%), Positives = 51/68 (75%)
Frame = +2 / -2
Query: 290 LLLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQ 469
L LA+ +L YL + VLGFSCV+ R FTPHSD LP L+ V +L ADAEQVRNP FL+L+
Sbjct: 5984684 LHLATCQLGYLLEHVLGFSCVVYRSFTPHSDPLPLLIHVLILSYADAEQVRNPSSFLQLE 5984505
Query: 470 SITVVPLL 493
+TV+ LL
Sbjct: 5984504 KVTVITLL 5984481
Score = 92.7 bits (196), Expect(3) = 8e-029
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +3 / -3
Query: 297 *QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFR 470
*Q VS AI SS YL SAA STGASLLTVILCLFS +YS VTLTRNR*GTQVAS S R
Sbjct: 5984677 *QPVSLAISSSMYLASAAWSTGASLLTVILCLFSFMYSF*VTLTRNR*GTQVASFSLR 5984504
Score = 90.4 bits (191), Expect(3) = 2e-069
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = -1 / +3
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
RYIMV+KVSDPTGEAW+S+FN+ AE+I+GCSADELDRIRKE
Sbjct: 5984151 RYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADELDRIRKE 5984273
Score = 81.7 bits (172), Expect(3) = 9e-030
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -3 / +2
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+A+GS+LGSSPVPRQR++ *+ E+AE+HCEE*S+GR RS* QV A DS+
Sbjct: 5984483 GG**QLPSQAEGSYLGSSPVPRQRNSE*VHE*EEAEDHCEE*SSGRPRS*SQVHARGDSQ 5984662
Query: 311 AYCLL 297
A LL
Sbjct: 5984663 ADRLL 5984677
Score = 67.0 bits (140), Expect(3) = 2e-047
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2 / -2
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L P+PIKL+ AAN+ LC+++E R P L SR+GDLDDHDV +
Sbjct: 5984273 LLPNPIKLICTAANNPLCLIIEQRKPGLTSRVGDLDDHDVPE 5984148
Score = 62.0 bits (129), Expect(3) = 9e-030
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -3 / +3
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*P HVVP LQDLQQEGD* WI ILV +P+E* +LTE+
Sbjct: 5983941 QA*PNHVVPSLQDLQQEGD*GNWIRILV*RVPEE*C*VLTEV 5984066
Score = 60.2 bits (125), Expect(3) = 9e-030
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -3 / +2
Query: 626 GMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
G ++HHG QGLR YW G+ VQ + RED WLQ R A*SD E G
Sbjct: 5984138 GSFLQVHHGHQGLRPYW*GLAFSVQ*SGREDCWLQCR*A*SD*EGG 5984275
Score = 56.1 bits (116), Expect(3) = 8e-029
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +1 / -3
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
SVS HS G TSI IQ QSPSCCRSCK GTT GQ
Sbjct: 5984062 SVSTQHHSSGTLHTSILIQLPQSPSCCRSCKLGTTWFGQ 5983946
Score = 51.9 bits (107), Expect(3) = 8e-029
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -3
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QP I SA SLN E+ ASPVGSETL TMMYL +
Sbjct: 5984239 QPTILSA*SLNRESQASPVGSETLMTMMYLKK 5984144
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 139 bits (299), Expect(2) = 4e-052
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +2
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 5950865 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 5951044
Query: 313 KLTAC* 296
KLT C*
Sbjct: 5951045 KLTGC* 5951062
Score = 107 bits (228), Expect(2) = 4e-052
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 5950323 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 5950448
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 139 bits (299), Expect(2) = 4e-052
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 5950078 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 5950257
Query: 313 KLTAC* 296
KLT C*
Sbjct: 5950258 KLTGC* 5950275
Score = 107 bits (228), Expect(2) = 4e-052
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 5949536 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 5949661
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 139 bits (299), Expect(2) = 4e-052
Identities = 57/66 (86%), Positives = 63/66 (95%)
Frame = -1 / +2
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQ+EY NEKRQRITVRSEAPV+HAAE+KY+LE+IA
Sbjct: 6176843 QEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAKYMLEEIA 6177022
Query: 313 KLTAC* 296
KLT C*
Sbjct: 6177023 KLTGC* 6177040
Score = 107 bits (228), Expect(2) = 4e-052
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKTCNKKVTE GSGYWCEGCQKND+ECSLR
Sbjct: 6176301 IKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLR 6176426
>gb|AQ396394.2|AQ396394 nbxb0067P07r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0067P07r, DNA sequence
Length = 987
Score = 90.4 bits (191), Expect(2) = 3e-034
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1 / -3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQ MWYRACKT NK V E GSGYWCEG QK+D+ECSLR
Sbjct: 592 IKPDQTMWYRACKTYNKNVREAIGSGYWCEGSQKSDAECSLR 467
Score = 85.4 bits (180), Expect(2) = 5e-025
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +3 / +3
Query: 606 MYLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
+YLSEHS S FW PSHQYP+P S TFLL VLQARYHM WSGL L
Sbjct: 462 LYLSEHSASLFWDPSHQYPEPIASRTFLL*VLQARYHMVWSGLIRL 599
Score = 79.4 bits (167), Expect(2) = 3e-034
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = -1 / -3
Query: 613 RYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
R IMV+KVSDPTGEAW+S+FN+ E+I+GCSA+ELDRI KE
Sbjct: 379 RCIMVIKVSDPTGEAWLSLFNDQTERIVGCSANELDRISKE 257
Score = 53.3 bits (110), Expect(2) = 5e-025
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
L + IKL+ AAN+ LC+++E R P L SR+ DLDDHD +
Sbjct: 257 LLTNAIKLICTAANNPLCLIIEQRKPGLTSRV*DLDDHDAPE 382
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,234,274,744
Number of Sequences: 438736
Number of extensions: 81417352
Number of successful extensions: 373021
Number of sequences better than 1.0e-020: 16
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 176979636795
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)