TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA... 194 1e-048
dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA... 191 9e-048
ref|XM_475374.1| Oryza sativa (japonica cultivar-group), p... 194 9e-048
dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA... 192 6e-047
gb|AU065597.1|AU065597 AU065597 Rice cDNA from immature lea... 191 8e-047
gb|CV725138.1|CV725138 14Salt--02-B03.g1 Salt treated rice ... 191 8e-047
dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA... 191 8e-047
ref|NM_193707.1| Oryza sativa (japonica cultivar-group), p... 191 8e-047
gb|AU058259.1|AU058259 AU058259 Oryza sativa Nipponbare imm... 186 4e-045
gb|AU183330.1|AU183330 AU183330 Rice cDNA from immature lea... 184 1e-044
ref|XM_475081.1| Oryza sativa (japonica cultivar-group), p... 122 2e-043
gb|AU173102.1|AU173102 AU173102 Rice root Oryza sativa (jap... 179 3e-043
gb|AACV01012352.1| Oryza sativa (japonica cultivar-group) c... 122 6e-043
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 122 1e-041
gb|AC108876.2| Oryza sativa (japonica cultivar-group) chrom... 122 2e-041
gb|AU094183.1|AU094183 AU094183 Rice panicle at flowering s... 173 2e-041
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 122 2e-041
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 122 3e-041
gb|AACV01010765.1| Oryza sativa (japonica cultivar-group) c... 122 6e-041
gb|AC093921.2| Oryza sativa (japonica cultivar-group) chrom... 122 1e-040
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 122 2e-040
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 122 3e-040
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 122 3e-040
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 122 9e-040
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 122 2e-039
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 122 7e-039
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 122 8e-039
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 122 1e-038
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 122 1e-038
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 122 2e-038
gb|AU029353.1|AU029353 AU029353 Rice panicle shorter than 3... 141 4e-037
gb|AU029320.1|AU029320 AU029320 Rice panicle shorter than 3... 158 1e-036
gb|AU065295.1|AU065295 AU065295 Rice cDNA from immature lea... 112 2e-036
dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA... 155 7e-036
dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA... 150 2e-034
ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA 149 4e-034
gb|AU184065.1|AU184065 AU184065 Rice root Oryza sativa (jap... 149 6e-034
dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA... 148 8e-034
dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA... 148 8e-034
dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA... 148 8e-034
dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA... 148 8e-034
ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA 148 8e-034
gb|CB648097.1|CB648097 OSJNEb11F09.r OSJNEb Oryza sativa (j... 148 1e-033
gb|CB681474.1|CB681474 OSJNEf07M04.r OSJNEf Oryza sativa (j... 148 1e-033
gb|CF290894.1|CF290894 14ROOT--01-B17.g1 Rice root plasmid ... 148 1e-033
gb|CF304442.1|CF304442 ABF1--04-P18.g1 ABF3-overexpressing ... 148 1e-033
dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA... 148 1e-033
ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA 148 1e-033
gb|AU165979.1|AU165979 AU165979 Rice panicle shorter than 3... 146 4e-033
gb|CF281327.1|CF281327 14ETL--08-F12.g1 Rice etiolated leaf... 146 4e-033
gb|CF297052.1|CF297052 30DGS--07-K23.b1 Rice leaf plasmid c... 145 5e-033
gb|CF294301.1|CF294301 30DGS--03-M13.b1 Rice leaf plasmid c... 143 4e-032
gb|AQ257917.1|AQ257917 nbxb0019G10r CUGI Rice BAC Library O... 83 5e-032
gb|CF280135.1|CF280135 14ETL--06-L01.b1 Rice etiolated leaf... 130 7e-032
gb|CV726853.1|CV726853 14Salt--04-L09.b1 Salt treated rice ... 139 4e-031
gb|AU092780.1|AU092780 AU092780 Rice callus Oryza sativa (j... 138 8e-031
gb|AU082124.1|AU082124 AU082124 Rice mature leaf Oryza sati... 131 1e-030
gb|AU095387.1|AU095387 AU095387 Rice cDNA from immature lea... 94 1e-030
gb|CV724855.1|CV724855 14Salt--01-K12.b1 Salt treated rice ... 136 3e-030
gb|AACV01007816.1| Oryza sativa (japonica cultivar-group) c... 97 5e-030
emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC O... 97 1e-029
gb|AF377946.3| Oryza sativa (japonica cultivar-group) chrom... 97 1e-029
gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic ... 97 1e-029
gb|AC146936.4| Oryza sativa (japonica cultivar-group) chrom... 97 1e-029
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 61 1e-029
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 61 2e-029
emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromoso... 61 2e-029
emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC O... 97 2e-029
gb|AACV01008758.1| Oryza sativa (japonica cultivar-group) c... 61 2e-029
gb|AACV01018502.1| Oryza sativa (japonica cultivar-group) c... 95 5e-029
gb|AU029344.1|AU029344 AU029344 Rice panicle shorter than 3... 119 1e-028
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 97 2e-028
gb|AACV01016514.1| Oryza sativa (japonica cultivar-group) c... 94 3e-028
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 97 3e-028
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 97 6e-028
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 95 7e-028
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 95 7e-028
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 95 8e-028
dbj|AP003838.3| Oryza sativa (japonica cultivar-group) geno... 94 1e-027
emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC O... 94 1e-027
gb|D15670.1|D15670 RICC1060A Rice callus Oryza sativa (japo... 124 1e-026
ref|NT_107148.1| Oryza sativa (japonica cultivar-group) 94 2e-026
gb|AU029343.1|AU029343 AU029343 Rice panicle shorter than 3... 113 3e-026
gb|C96964.1|C96964 C96964 Rice callus Oryza sativa (japonic... 122 4e-026
gb|AU088594.2|AU088594 AU088594 Rice callus Oryza sativa (j... 122 6e-026
gb|C74363.1|C74363 C74363 Rice panicle shorter than 3cm Ory... 122 8e-026
gb|AU029997.1|AU029997 AU029997 Rice cDNA from immature lea... 122 8e-026
gb|AU095388.1|AU095388 AU095388 Rice cDNA from immature lea... 122 8e-026
gb|AU165995.1|AU165995 AU165995 Rice panicle shorter than 3... 122 8e-026
gb|AU181543.1|AU181543 AU181543 Rice callus (2001) Oryza sa... 122 8e-026
gb|CV722803.1|CV722803 root--01-J22.g1 Rice root lambda pha... 122 8e-026
gb|CV724330.1|CV724330 root--06-K12.g1 Rice root lambda pha... 122 8e-026
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 122 8e-026
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 122 8e-026
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 122 8e-026
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 122 8e-026
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 122 8e-026
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 122 8e-026
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 122 8e-026
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 122 8e-026
gb|AACV01025103.1| Oryza sativa (japonica cultivar-group) c... 97 9e-026
gb|AU063029.2|AU063029 AU063029 Rice callus Oryza sativa (j... 72 3e-025
gb|AU064367.1|AU064367 AU064367 Rice panicle shorter than 3... 119 4e-025
gb|AU108901.1|AU108901 AU108901 Rice callus Oryza sativa (j... 119 4e-025
gb|AACV01024664.1| Oryza sativa (japonica cultivar-group) c... 83 5e-025
gb|AU092838.1|AU092838 AU092838 Rice callus Oryza sativa (j... 73 9e-025
gb|C93673.1|C93673 C93673 Rice panicle at flowering stage O... 95 3e-024
gb|AU092411.1|AU092411 AU092411 Rice callus Oryza sativa (j... 112 4e-023
gb|AU163812.1|AU163812 AU163812 Rice panicle at ripening st... 76 5e-023
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 83 5e-023
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 97 4e-022
gb|D23029.1|D23029 RICC2067A Rice callus Oryza sativa (japo... 86 1e-021
gb|C27961.1|C27961 C27961 Rice callus cDNA Oryza sativa (ja... 92 2e-021
gb|AU031646.1|AU031646 AU031646 Rice root Oryza sativa (jap... 87 7e-021
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full
insert sequence
Length = 1097
Score = 194 bits (419), Expect(2) = 1e-048
Identities = 84/103 (81%), Positives = 85/103 (82%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP GNAARDNK
Sbjct: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 329
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
Score = 122 bits (260), Expect(6) = 2e-046
Identities = 55/88 (62%), Positives = 56/88 (63%)
Frame = -2 / -2
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 487 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 308
Query: 307 PANXXXXXXXXXXXXXXXTGAPVPTRWE 224
PA+ TGAPVP RWE
Sbjct: 307 PASSSTSAARYSRTAAR*TGAPVPMRWE 224
Score = 79.9 bits (168), Expect(3) = 7e-024
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / -1
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 455 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 339
Score = 64.8 bits (135), Expect(6) = 2e-046
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 245 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 120
Score = 41.4 bits (84), Expect(3) = 7e-024
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 187 TGNWSPALTERDTGFFFG 134
Score = 36.3 bits (73), Expect(3) = 7e-024
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / -3
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 528 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 436
Score = 27.6 bits (54), Expect(6) = 2e-046
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -1
Query: 860 NKFYTSLQSYYKQHLVIHRS 801
+K S Q YY+QHL IH S
Sbjct: 884 SKLSKS*QYYYRQHLTIHSS 825
Score = 26.3 bits (51), Expect(2) = 1e-048
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 802 DL*ITRCCL**DCKDV*N 855
+L*I RCCL** C D+ N
Sbjct: 826 EL*IVRCCL**YC*DLDN 879
Score = 24.9 bits (48), Expect(6) = 2e-046
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / -3
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 525 PSWATWGSYPPW 490
Score = 24.4 bits (47), Expect(6) = 2e-046
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 644 QQIGAFQFRQEGE 606
Score = 24.0 bits (46), Expect(6) = 2e-046
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / -3
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 579 RHCVCPKRPPPSLATW 532
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full
insert sequence
Length = 912
Score = 191 bits (412), Expect(2) = 9e-048
Identities = 83/103 (80%), Positives = 84/103 (81%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VS SVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP GNAARDNK
Sbjct: 149 VSPSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 328
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 329 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 457
Score = 122 bits (260), Expect(6) = 2e-046
Identities = 55/88 (62%), Positives = 56/88 (63%)
Frame = -2 / -1
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 486 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 307
Query: 307 PANXXXXXXXXXXXXXXXTGAPVPTRWE 224
PA+ TGAPVP RWE
Sbjct: 306 PASSSTSAARYSRTAAR*TGAPVPMRWE 223
Score = 79.9 bits (168), Expect(3) = 4e-023
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / -3
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 454 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 338
Score = 62.9 bits (131), Expect(6) = 2e-046
Identities = 31/42 (73%), Positives = 31/42 (73%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL G RLLL A AA
Sbjct: 244 AGADALGVAALLEVAADTADGELEPGLDGGGHRLLLRPAAAA 119
Score = 38.2 bits (77), Expect(3) = 4e-023
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TE +TGFF G
Sbjct: 186 TGNWSPALTEGDTGFFFG 133
Score = 36.3 bits (73), Expect(3) = 4e-023
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / -2
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 527 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 435
Score = 27.6 bits (54), Expect(6) = 2e-046
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -3
Query: 860 NKFYTSLQSYYKQHLVIHRS 801
+K S Q YY+QHL IH S
Sbjct: 883 SKLSKS*QYYYRQHLTIHSS 824
Score = 26.3 bits (51), Expect(2) = 9e-048
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 802 DL*ITRCCL**DCKDV*N 855
+L*I RCCL** C D+ N
Sbjct: 825 EL*IVRCCL**YC*DLDN 878
Score = 24.9 bits (48), Expect(6) = 2e-046
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / -2
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 524 PSWATWGSYPPW 489
Score = 24.4 bits (47), Expect(6) = 2e-046
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 643 QQIGAFQFRQEGE 605
Score = 24.0 bits (46), Expect(6) = 2e-046
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / -2
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 578 RHCVCPKRPPPSLATW 531
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 492
Score = 194 bits (419), Expect = 9e-048
Identities = 84/103 (81%), Positives = 85/103 (82%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP GNAARDNK
Sbjct: 79 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 258
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 259 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 387
Score = 122 bits (260), Expect(3) = 3e-041
Identities = 55/88 (62%), Positives = 56/88 (63%)
Frame = -2 / -2
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 416 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 237
Query: 307 PANXXXXXXXXXXXXXXXTGAPVPTRWE 224
PA+ TGAPVP RWE
Sbjct: 236 PASSSTSAARYSRTAAR*TGAPVPMRWE 153
Score = 79.9 bits (168), Expect(3) = 1e-024
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / -1
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 384 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 268
Score = 64.8 bits (135), Expect(3) = 3e-041
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 174 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 49
Score = 41.4 bits (84), Expect(3) = 1e-024
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 116 TGNWSPALTERDTGFFFG 63
Score = 36.3 bits (73), Expect(3) = 1e-024
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / -3
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 457 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 365
Score = 24.9 bits (48), Expect(3) = 3e-041
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / -3
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 454 PSWATWGSYPPW 419
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full
insert sequence
Length = 797
Score = 192 bits (413), Expect = 6e-047
Identities = 83/103 (80%), Positives = 85/103 (82%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP GNAARDNK
Sbjct: 153 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 332
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 333 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 461
Score = 112 bits (240), Expect(2) = 7e-036
Identities = 50/86 (58%), Positives = 53/86 (61%)
Frame = -2 / -2
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 487 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 308
Query: 304 ANXXXXXXXXXXXXXXXTGAPVPTRW 227
A+ TGAPVPTRW
Sbjct: 307 ASSSTSAARYSRTAAR*TGAPVPTRW 230
Score = 62.5 bits (130), Expect(2) = 7e-036
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 248 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 132
>gb|AU065597.1|AU065597 AU065597 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50453_1A, mRNA sequence
Length = 729
Score = 191 bits (412), Expect = 8e-047
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 164 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 343
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 344 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 472
Score = 108 bits (230), Expect(3) = 2e-036
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -2 / -1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 504 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 325
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 324 FPASSSTSAARYSRTAAR*TGAPVPMRW 241
Score = 62.5 bits (130), Expect(3) = 2e-036
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 259 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 155
Score = 24.9 bits (48), Expect(3) = 2e-036
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -2
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 542 TSRRPSWATW 513
>gb|CV725138.1|CV725138 14Salt--02-B03.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-B03, mRNA sequence
Length = 491
Score = 191 bits (412), Expect = 8e-047
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 175 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 354
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 355 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 483
Score = 100 bits (212), Expect(2) = 5e-032
Identities = 46/80 (57%), Positives = 47/80 (58%)
Frame = -2 / -1
Query: 466 VFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPANXXXX 287
VFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AAFPA+
Sbjct: 491 VFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAAFPASSSTS 312
Query: 286 XXXXXXXXXXXTGAPVPTRW 227
TGAPVP RW
Sbjct: 311 AARYSRTAAR*TGAPVPMRW 252
Score = 62.5 bits (130), Expect(2) = 5e-032
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 270 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 166
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full
insert sequence
Length = 754
Score = 191 bits (412), Expect = 8e-047
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 175 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 354
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 355 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 483
Score = 108 bits (230), Expect(3) = 2e-036
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -2 / -3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 515 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 336
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 335 FPASSSTSAARYSRTAAR*TGAPVPMRW 252
Score = 62.5 bits (130), Expect(3) = 2e-036
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 270 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 166
Score = 24.9 bits (48), Expect(3) = 2e-036
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -1
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 553 TSRRPSWATW 524
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 480
Score = 191 bits (412), Expect = 8e-047
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 85 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 264
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 265 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 393
Score = 103 bits (219), Expect(3) = 2e-034
Identities = 49/87 (56%), Positives = 52/87 (59%)
Frame = -2 / -2
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 425 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 246
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTR 230
FPA+ TGAPVP R
Sbjct: 245 FPASSSTSAARYSRTAAR*TGAPVPMR 165
Score = 58.8 bits (122), Expect(3) = 2e-034
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD L VA LLEVAADTA GELE GL GAR RLL
Sbjct: 180 AGADALRVAALLEVAADTADGELEPGLDGARHRLL 76
Score = 26.7 bits (52), Expect(3) = 2e-034
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -3
Query: 555 TSRPPFWATW 526
T RPP WATW
Sbjct: 463 TCRPPSWATW 434
>gb|AU058259.1|AU058259 AU058259 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50282_1A, mRNA
sequence
Length = 593
Score = 186 bits (400), Expect = 4e-045
Identities = 80/103 (77%), Positives = 83/103 (80%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 143 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 322
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRIIPRHVLLAIRNDEELGKLLAGVT HGGVLPNINPVLLP
Sbjct: 323 KNRIIPRHVLLAIRNDEELGKLLAGVTKEHGGVLPNINPVLLP 451
Score = 105 bits (224), Expect(2) = 1e-033
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = -2 / -3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPC++VTPA ST RGMI FFLLS AA
Sbjct: 483 PAAAAFSAVFLGSSTGLMLGSTPPCSLVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 304
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 303 FPASSSTSAARYSRTAAR*TGAPVPMRW 220
Score = 62.5 bits (130), Expect(2) = 1e-033
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 238 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 134
>gb|AU183330.1|AU183330 AU183330 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61713, mRNA sequence
Length = 446
Score = 184 bits (397), Expect = 1e-044
Identities = 79/100 (79%), Positives = 82/100 (82%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 145 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 324
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 449
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV
Sbjct: 325 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPV 444
Score = 89.0 bits (188), Expect(2) = 9e-029
Identities = 41/75 (54%), Positives = 42/75 (56%)
Frame = -2 / -1
Query: 451 STGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPANXXXXXXXXX 272
STGLMLG TPPCAMVTPA ST RGMI FFLLS AAFPA+
Sbjct: 446 STGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAAFPASSSTSAARYS 267
Query: 271 XXXXXXTGAPVPTRW 227
TGAPVP RW
Sbjct: 266 RTAAR*TGAPVPMRW 222
Score = 62.5 bits (130), Expect(2) = 9e-029
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 240 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 136
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 522
Score = 122 bits (260), Expect(2) = 2e-043
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +1
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 283 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 435
Score = 94.1 bits (199), Expect(4) = 5e-033
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 461 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 282
Query: 304 AN 299
A+
Sbjct: 281 AS 276
Score = 79.0 bits (166), Expect(2) = 2e-043
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP
Sbjct: 76 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAP 177
Score = 62.5 bits (130), Expect(4) = 5e-033
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 171 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 55
Score = 25.4 bits (49), Expect(4) = 5e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 250 GAPVPTRW 227
GAPVPTRW
Sbjct: 176 GAPVPTRW 153
Score = 21.7 bits (41), Expect(4) = 5e-033
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3 / -3
Query: 552 SRPPFWATWRRRP 514
S P W TWR P
Sbjct: 517 SAPASWGTWRLCP 479
>gb|AU173102.1|AU173102 AU173102 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0711, mRNA sequence
Length = 448
Score = 179 bits (386), Expect = 3e-043
Identities = 77/98 (78%), Positives = 80/98 (81%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNK
Sbjct: 154 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 333
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIN 443
KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIN
Sbjct: 334 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIN 447
Score = 82.2 bits (173), Expect(2) = 1e-026
Identities = 38/72 (52%), Positives = 39/72 (54%)
Frame = -2 / -3
Query: 442 LMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPANXXXXXXXXXXXX 263
LMLG TPPCAMVTPA ST RGMI FFLLS AAFPA+
Sbjct: 446 LMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAAFPASSSTSAARYSRTA 267
Query: 262 XXXTGAPVPTRW 227
TGAPVP RW
Sbjct: 266 AR*TGAPVPMRW 231
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 249 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 145
>gb|AACV01012352.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012352, whole
genome shotgun sequence
Length = 16496
Score = 122 bits (260), Expect(3) = 6e-043
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 8539 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 8387
Score = 103 bits (220), Expect(6) = 2e-035
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +3
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 8358 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 8537
Query: 307 PAN 299
PA+
Sbjct: 8538 PAS 8546
Score = 81.7 bits (172), Expect(3) = 6e-043
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / -1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP
Sbjct: 8771 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAP 8670
Score = 79.9 bits (168), Expect(4) = 5e-030
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / +2
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 8390 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 8506
Score = 64.8 bits (135), Expect(4) = 5e-030
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / +3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 8676 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 8801
Score = 41.4 bits (84), Expect(6) = 2e-035
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 8734 TGNWSPALTERDTGFFFG 8787
Score = 36.3 bits (73), Expect(4) = 5e-030
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / +1
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 8317 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 8409
Score = 27.6 bits (54), Expect(4) = 5e-030
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +2
Query: 860 NKFYTSLQSYYKQHLVIHRS 801
+K S Q YY+QHL IH S
Sbjct: 7961 SKLSKS*QYYYRQHLTIHSS 8020
Score = 26.3 bits (51), Expect(3) = 6e-043
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 802 DL*ITRCCL**DCKDV*N 855
+L*I RCCL** C D+ N
Sbjct: 8019 EL*IVRCCL**YC*DLDN 7966
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +1
Query: 250 GAPVPTRWE 224
GAPVP RWE
Sbjct: 8671 GAPVPMRWE 8697
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / +1
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 8320 PSWATWGSYPPW 8355
Score = 24.4 bits (47), Expect(6) = 2e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 8201 QQIGAFQFRQEGE 8239
Score = 24.0 bits (46), Expect(6) = 2e-035
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / +1
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 8266 RHCVCPKRPPPSLATW 8313
>gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001262, whole
genome shotgun sequence
Length = 9271
Score = 122 bits (260), Expect(2) = 1e-041
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 2772 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 2924
Score = 92.3 bits (195), Expect(3) = 5e-028
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / -1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 2956 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 2777
Query: 310 FPAN 299
FPA+
Sbjct: 2776 FPAS 2765
Score = 78.5 bits (165), Expect(2) = 1e-041
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 2505 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 2606
Score = 58.8 bits (122), Expect(3) = 5e-028
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD L VA LLEVAADTA GELE GL GAR RLL
Sbjct: 2600 AGADALRVAALLEVAADTADGELEPGLDGARHRLL 2496
Score = 26.7 bits (52), Expect(3) = 5e-028
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -2
Query: 555 TSRPPFWATW 526
T RPP WATW
Sbjct: 2994 TCRPPSWATW 2965
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02,
complete sequence
Length = 93826
Score = 122 bits (260), Expect(2) = 2e-041
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 7535 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 7383
Score = 103 bits (220), Expect(6) = 2e-035
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +1
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 7354 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 7533
Query: 307 PAN 299
PA+
Sbjct: 7534 PAS 7542
Score = 81.7 bits (172), Expect(2) = 2e-041
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP
Sbjct: 7767 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAP 7666
Score = 79.9 bits (168), Expect(4) = 7e-028
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / +3
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 7386 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 7502
Score = 64.8 bits (135), Expect(4) = 7e-028
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / +1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 7672 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 7797
Score = 41.4 bits (84), Expect(6) = 2e-035
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 7730 TGNWSPALTERDTGFFFG 7783
Score = 36.3 bits (73), Expect(4) = 7e-028
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / +2
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 7313 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 7405
Score = 27.6 bits (54), Expect(4) = 7e-028
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +3
Query: 860 NKFYTSLQSYYKQHLVIHRS 801
+K S Q YY+QHL IH S
Sbjct: 6957 SKLSKS*QYYYRQHLTIHSS 7016
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 250 GAPVPTRWE 224
GAPVP RWE
Sbjct: 7667 GAPVPMRWE 7693
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / +2
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 7316 PSWATWGSYPPW 7351
Score = 24.4 bits (47), Expect(6) = 2e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 7197 QQIGAFQFRQEGE 7235
Score = 24.0 bits (46), Expect(6) = 2e-035
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / +2
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 7262 RHCVCPKRPPPSLATW 7309
>gb|AU094183.1|AU094183 AU094183 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3565, mRNA sequence
Length = 631
Score = 173 bits (373), Expect = 2e-041
Identities = 73/95 (76%), Positives = 77/95 (81%)
Frame = +3 / +1
Query: 174 LQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRH 353
+QFPVGRIGRYLK+GRY+QR+GTGAP GNAARDNKKNRIIPRH
Sbjct: 58 VQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 237
Query: 354 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
VLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 238 VLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 342
Score = 108 bits (230), Expect(4) = 2e-032
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -2 / -3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 374 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 195
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 194 FPASSSTSAARYSRTAAR*TGAPVPMRW 111
Score = 47.3 bits (97), Expect(4) = 2e-032
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLG 135
AGAD LGVA LLEVAADTA GEL+ L LG
Sbjct: 129 AGADALGVAALLEVAADTADGELDPALTXRDTXFFLG 19
Score = 24.9 bits (48), Expect(4) = 2e-032
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -1
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 412 TSRRPSWATW 383
Score = 22.1 bits (42), Expect(4) = 2e-032
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3 / -1
Query: 885 FFFFFFSTKQILHIFAILLQTAPSDSQ 805
FFFFFF K + I L SQ
Sbjct: 616 FFFFFFLKKNLTSXKFIFLNRHKHRSQ 536
>gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006345, whole
genome shotgun sequence
Length = 12782
Score = 122 bits (260), Expect(2) = 2e-041
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -1
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 7943 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 7791
Score = 92.3 bits (195), Expect(3) = 3e-028
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 7759 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 7938
Query: 310 FPAN 299
FPA+
Sbjct: 7939 FPAS 7950
Score = 78.5 bits (165), Expect(2) = 2e-041
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 8200 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 8099
Score = 62.5 bits (130), Expect(3) = 3e-028
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 8105 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 8209
Score = 24.9 bits (48), Expect(3) = 3e-028
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / +2
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 7721 TSRRPSWATW 7750
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
complete sequence
Length = 163130
Score = 122 bits (260), Expect(2) = 3e-041
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 101892 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 101740
Score = 103 bits (220), Expect(6) = 2e-035
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +2
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 101711 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 101890
Query: 307 PAN 299
PA+
Sbjct: 101891 PAS 101899
Score = 81.7 bits (172), Expect(2) = 3e-041
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP
Sbjct: 102124 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAP 102023
Score = 79.9 bits (168), Expect(4) = 4e-027
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / +1
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 101743 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 101859
Score = 64.8 bits (135), Expect(4) = 4e-027
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 102029 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 102154
Score = 41.4 bits (84), Expect(6) = 2e-035
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 102087 TGNWSPALTERDTGFFFG 102140
Score = 36.3 bits (73), Expect(4) = 4e-027
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / +3
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 101670 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 101762
Score = 27.6 bits (54), Expect(4) = 4e-027
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +1
Query: 860 NKFYTSLQSYYKQHLVIHRS 801
+K S Q YY+QHL IH S
Sbjct: 101314 SKLSKS*QYYYRQHLTIHSS 101373
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 250 GAPVPTRWE 224
GAPVP RWE
Sbjct: 102024 GAPVPMRWE 102050
Score = 24.9 bits (48), Expect(6) = 2e-035
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / +3
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 101673 PSWATWGSYPPW 101708
Score = 24.4 bits (47), Expect(6) = 2e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 101554 QQIGAFQFRQEGE 101592
Score = 24.0 bits (46), Expect(6) = 2e-035
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / +3
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 101619 RHCVCPKRPPPSLATW 101666
>gb|AACV01010765.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010765, whole
genome shotgun sequence
Length = 49043
Score = 122 bits (260), Expect(2) = 6e-041
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +1
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 13729 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 13881
Score = 94.1 bits (199), Expect(3) = 2e-032
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -1
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 13907 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 13728
Query: 304 AN 299
A+
Sbjct: 13727 AS 13722
Score = 79.0 bits (166), Expect(2) = 6e-041
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP
Sbjct: 13494 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAP 13595
Score = 62.5 bits (130), Expect(3) = 2e-032
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 13589 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 13473
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 250 GAPVPTRW 227
GAPVPTRW
Sbjct: 13594 GAPVPTRW 13571
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0041A22, complete sequence
Length = 117919
Score = 122 bits (260), Expect(2) = 1e-040
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 52445 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 52597
Score = 94.1 bits (199), Expect(3) = 2e-032
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 52623 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 52444
Query: 304 AN 299
A+
Sbjct: 52443 AS 52438
Score = 79.0 bits (166), Expect(2) = 1e-040
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP
Sbjct: 52210 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAP 52311
Score = 62.5 bits (130), Expect(3) = 2e-032
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 52305 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 52189
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -3
Query: 250 GAPVPTRW 227
GAPVPTRW
Sbjct: 52310 GAPVPTRW 52287
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0507H06
Length = 136351
Score = 122 bits (260), Expect(2) = 2e-040
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 70383 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 70535
Score = 92.3 bits (195), Expect(2) = 1e-025
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / -1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 70567 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 70388
Query: 310 FPAN 299
FPA+
Sbjct: 70387 FPAS 70376
Score = 78.5 bits (165), Expect(2) = 2e-040
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 70116 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 70217
Score = 58.8 bits (122), Expect(2) = 1e-025
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD L VA LLEVAADTA GELE GL GAR RLL
Sbjct: 70211 AGADALRVAALLEVAADTADGELEPGLDGARHRLL 70107
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0002D01, from chromosome 3, complete sequence
Length = 187589
Score = 122 bits (260), Expect(2) = 3e-040
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 168781 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 168629
Score = 92.3 bits (195), Expect(2) = 1e-026
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / +3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 168597 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 168776
Query: 310 FPAN 299
FPA+
Sbjct: 168777 FPAS 168788
Score = 78.5 bits (165), Expect(2) = 3e-040
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 169038 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 168937
Score = 62.5 bits (130), Expect(2) = 1e-026
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / +1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 168943 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 169047
>ref|NT_107213.1| Oryza sativa (japonica cultivar-group)
Length = 2036819
Score = 122 bits (260), Expect(2) = 3e-040
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 1066341 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 1066189
Score = 103 bits (220), Expect(6) = 1e-035
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +2
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 1066160 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 1066339
Query: 307 PAN 299
PA+
Sbjct: 1066340 PAS 1066348
Score = 81.7 bits (172), Expect(2) = 3e-040
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP
Sbjct: 1066573 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAP 1066472
Score = 79.9 bits (168), Expect(3) = 2e-024
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -1 / +1
Query: 455 EQHRVDVGQNPAVCDGDAGQ*LPELLIVADRQQYVSRDD 339
EQHRVDVGQ+PAV DGDAGQ LPELL+VADRQQ+V RDD
Sbjct: 1066192 EQHRVDVGQHPAVRDGDAGQQLPELLVVADRQQHVPRDD 1066308
Score = 64.8 bits (135), Expect(3) = 2e-024
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 1066478 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 1066603
Score = 41.4 bits (84), Expect(6) = 1e-035
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+TGFF G
Sbjct: 1066536 TGNWSPALTERDTGFFFG 1066589
Score = 36.3 bits (73), Expect(3) = 2e-024
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3 / +3
Query: 528 WRRRPSWVTSSLCLPWQQRQRFSWGAAQG*C 436
W +W + PW +R R SWGAA G*C
Sbjct: 1066119 WPSWATWGSYPPWPPWPRRSRSSWGAAPG*C 1066211
Score = 24.9 bits (48), Expect(6) = 1e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 250 GAPVPTRWE 224
GAPVP RWE
Sbjct: 1066473 GAPVPMRWE 1066499
Score = 24.9 bits (48), Expect(6) = 1e-035
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -3 / +3
Query: 543 PFWATWRRRPSW 508
P WATW P W
Sbjct: 1066122 PSWATWGSYPPW 1066157
Score = 24.4 bits (47), Expect(6) = 1e-035
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 623 RQLGAFQFREDRE 585
+Q+GAFQFR++ E
Sbjct: 1066003 QQIGAFQFRQEGE 1066041
Score = 24.0 bits (46), Expect(6) = 1e-035
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3 / +3
Query: 573 QHCQGPTSRPPFWATW 526
+HC P PP ATW
Sbjct: 1066068 RHCVCPKRPPPSLATW 1066115
>ref|NT_079870.2| Oryza sativa (japonica cultivar-group)
Length = 867822
Score = 122 bits (260), Expect(2) = 9e-040
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 707246 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 707398
Score = 94.1 bits (199), Expect(3) = 2e-032
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -1
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 707424 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 707245
Query: 304 AN 299
A+
Sbjct: 707244 AS 707239
Score = 79.0 bits (166), Expect(2) = 9e-040
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP
Sbjct: 707011 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAP 707112
Score = 62.5 bits (130), Expect(3) = 2e-032
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -1
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 707106 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 706990
Score = 25.4 bits (49), Expect(3) = 2e-032
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 250 GAPVPTRW 227
GAPVPTRW
Sbjct: 707111 GAPVPTRW 707088
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 122 bits (260), Expect(2) = 2e-039
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -1
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 4892874 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 4892722
Score = 103 bits (220), Expect(2) = 6e-029
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +2
Query: 487 SLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAF 308
SLAAA VFLGSSTGLMLG TPPCAMVTPA STCRGMIRFFLLSRAAF
Sbjct: 4892693 SLAAAEPVFLGSSTGLMLGSTPPCAMVTPASSFPSSSSLRIASSTCRGMIRFFLLSRAAF 4892872
Query: 307 PAN 299
PA+
Sbjct: 4892873 PAS 4892881
Score = 81.7 bits (172), Expect(2) = 2e-039
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLKQGRYSQR+GTGAP
Sbjct: 4893106 VSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAP 4893005
Score = 64.8 bits (135), Expect(2) = 6e-029
Identities = 32/42 (76%), Positives = 32/42 (76%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAAPAA 120
AGAD LGVA LLEVAADTA GELE GL GA RLLL A AA
Sbjct: 4893011 AGADALGVAALLEVAADTADGELEPGLDGAGHRLLLRPAAAA 4893136
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 122 bits (260), Expect(2) = 7e-039
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -1
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 815318 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 815166
Score = 92.3 bits (195), Expect(2) = 3e-025
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 815134 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 815313
Query: 310 FPAN 299
FPA+
Sbjct: 815314 FPAS 815325
Score = 78.5 bits (165), Expect(2) = 7e-039
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 815575 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 815474
Score = 62.5 bits (130), Expect(2) = 3e-025
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 815480 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 815584
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028
genomic scaffold, whole genome shotgun sequence
Length = 7678539
Score = 122 bits (260), Expect(2) = 8e-039
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 700761 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 700913
Score = 94.1 bits (199), Expect(3) = 6e-027
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -3
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A +AVF GSSTGLM G TPPCAMVTPA STC GMIRFFLLSRAAFP
Sbjct: 700939 LSAFSAVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFLLSRAAFP 700760
Query: 304 AN 299
A+
Sbjct: 700759 AS 700754
Score = 79.0 bits (166), Expect(2) = 8e-039
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QRVGTGAP
Sbjct: 700526 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAP 700627
Score = 62.5 bits (130), Expect(3) = 6e-027
Identities = 30/39 (76%), Positives = 30/39 (76%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLLLGAA 129
AGAD LGVA LLEVAAD A GELE GL GAR RLLL A
Sbjct: 700621 AGADALGVAALLEVAADAADGELEPGLDGARHRLLLRPA 700505
Score = 36.8 bits (74), Expect(3) = 6e-027
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / -1
Query: 821 HLVIHRSHPLTCLHSSRSLNLNRCF 747
H +HR+HP CL +SR+ NL+ CF
Sbjct: 6610098 HHHVHRAHPDQCLFTSRAQNLHDCF 6610024
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 122 bits (260), Expect(2) = 1e-038
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +3
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 413940 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 414092
Score = 92.3 bits (195), Expect(2) = 6e-024
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / -3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 414124 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 413945
Query: 310 FPAN 299
FPA+
Sbjct: 413944 FPAS 413933
Score = 78.5 bits (165), Expect(2) = 1e-038
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 413673 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 413774
Score = 58.8 bits (122), Expect(2) = 6e-024
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD L VA LLEVAADTA GELE GL GAR RLL
Sbjct: 413768 AGADALRVAALLEVAADTADGELEPGLDGARHRLL 413664
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003
genomic scaffold, whole genome shotgun sequence
Length = 8539496
Score = 122 bits (260), Expect(2) = 1e-038
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / +2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 449288 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 449440
Score = 92.3 bits (195), Expect(2) = 6e-024
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / -3
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 449472 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 449293
Query: 310 FPAN 299
FPA+
Sbjct: 449292 FPAS 449281
Score = 78.5 bits (165), Expect(2) = 1e-038
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 449021 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 449122
Score = 58.8 bits (122), Expect(2) = 6e-024
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD L VA LLEVAADTA GELE GL GAR RLL
Sbjct: 449116 AGADALRVAALLEVAADTADGELEPGLDGARHRLL 449012
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 122 bits (260), Expect(2) = 2e-038
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +3 / -2
Query: 306 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 9465146 GNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 9464994
Score = 92.3 bits (195), Expect(2) = 8e-025
Identities = 42/64 (65%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 9464962 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 9465141
Query: 310 FPAN 299
FPA+
Sbjct: 9465142 FPAS 9465153
Score = 78.5 bits (165), Expect(2) = 2e-038
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +3 / -3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAP 251
VSRSVKAGLQFPVGRIGRYLK+GRY+QR+GTGAP
Sbjct: 9465403 VSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAP 9465302
Score = 62.5 bits (130), Expect(2) = 8e-025
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 245 AGADTLGVATLLEVAADTAYGELEAGLHGARDRLL 141
AGAD LGVA LLEVAADTA GELE GL GAR RLL
Sbjct: 9465308 AGADALGVAALLEVAADTADGELEPGLDGARHRLL 9465412
>gb|AU029353.1|AU029353 AU029353 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30213_8Z, mRNA sequence
Length = 686
Score = 141 bits (303), Expect(2) = 4e-037
Identities = 60/83 (72%), Positives = 64/83 (77%)
Frame = +3 / +3
Query: 210 KQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAIRNDEELG 389
++G Y+QR+GTGAP GNAARDNKKNRIIPRHVLLAIRNDEELG
Sbjct: 219 QEGPYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELG 398
Query: 390 KLLAGVTIAHGGVLPNINPVLLP 458
KLLAGVTIAHGGVLPNINPVLLP
Sbjct: 399 KLLAGVTIAHGGVLPNINPVLLP 467
Score = 108 bits (230), Expect(4) = 3e-030
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -2 / -2
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 499 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 320
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 319 FPASSSTSAARYSRTAAR*TGAPVPMRW 236
Score = 37.7 bits (76), Expect(2) = 4e-037
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 165 KAGLQFPVGRIGRYLKQG 218
+ G QFPVGRIGRYLK+G
Sbjct: 175 RPGSQFPVGRIGRYLKKG 228
Score = 29.5 bits (58), Expect(4) = 3e-030
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 184 GNWRPAFTERETGFFLG 134
G PA TER+T FFLG
Sbjct: 193 GTGSPALTERDTAFFLG 143
Score = 29.0 bits (57), Expect(4) = 3e-030
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 227 GVATLLEVAADTAYGELEA 171
G LLEVAADTA GEL A
Sbjct: 237 GRXALLEVAADTADGELGA 181
Score = 24.9 bits (48), Expect(4) = 3e-030
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -3
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 537 TSRRPSWATW 508
>gb|AU029320.1|AU029320 AU029320 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30154_6Z, mRNA sequence
Length = 656
Score = 158 bits (339), Expect = 1e-036
Identities = 72/102 (70%), Positives = 73/102 (71%)
Frame = +3 / +2
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRSVKAGL FPVG IGRYLK+GR P GNAARD KK
Sbjct: 23 SRSVKAGLHFPVGXIGRYLKKGRTPSASAPAPPSTSPPFLDYLAAEVXELAGNAARDXKK 202
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP
Sbjct: 203 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 328
Score = 90.0 bits (190), Expect(5) = 5e-027
Identities = 39/62 (62%), Positives = 42/62 (67%)
Frame = -2 / -3
Query: 484 LAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFP 305
L+A + VF GSSTGLM G TPPCAMVTPA STC GMIRFF LSRAAFP
Sbjct: 354 LSAFSXVFFGSSTGLMFGSTPPCAMVTPASSFPSSSSLRIASSTCLGMIRFFXLSRAAFP 175
Query: 304 AN 299
A+
Sbjct: 174 AS 169
Score = 41.8 bits (85), Expect(5) = 5e-027
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -1 / -2
Query: 227 GVATLLEVAADTAYGELEAGLHGARDRLL 141
G LLEVAAD A GE+E GL GAR R+L
Sbjct: 97 GRTALLEVAADXADGEMEPGLXGARXRVL 11
Score = 25.4 bits (49), Expect(5) = 5e-027
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 250 GAPVPTRW 227
GAPVPTRW
Sbjct: 119 GAPVPTRW 96
Score = 21.7 bits (41), Expect(5) = 5e-027
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3 / -1
Query: 552 SRPPFWATWRRRP 514
S P W TWR P
Sbjct: 410 SAPASWGTWRLCP 372
Score = 21.7 bits (41), Expect(5) = 5e-027
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3 / -3
Query: 885 FFFFFFSTKQI 853
FFF FF KQI
Sbjct: 648 FFFXFFEHKQI 616
>gb|AU065295.1|AU065295 AU065295 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61204_3A, mRNA sequence
Length = 457
Score = 112 bits (239), Expect(3) = 2e-036
Identities = 48/69 (69%), Positives = 51/69 (73%)
Frame = +3 / +3
Query: 201 RYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAIRNDE 380
RYLK+GRY+QR+GTGAP GNAARDNKKNRIIPRHVLLAIRNDE
Sbjct: 192 RYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDE 371
Query: 381 ELGKLLAGV 407
ELGKLLAGV
Sbjct: 372 ELGKLLAGV 398
Score = 55.1 bits (114), Expect(4) = 8e-024
Identities = 27/60 (45%), Positives = 28/60 (46%)
Frame = -2 / -1
Query: 406 TPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAAFPANXXXXXXXXXXXXXXXTGAPVPTRW 227
TPA ST RGMI FFLLS AAFPA+ TGAPVP RW
Sbjct: 397 TPASSLPSSSSFLIASSTWRGMILFFLLSLAAFPASSSTSAARYSRTAAR*TGAPVPMRW 218
Score = 44.1 bits (90), Expect(4) = 8e-024
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2 / -3
Query: 463 FLGSSTGLMLGRTPPCAMV 407
FLGSSTGLMLG TPPC MV
Sbjct: 455 FLGSSTGLMLGSTPPCXMV 399
Score = 42.3 bits (86), Expect(3) = 2e-036
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3 / +1
Query: 408 TIAHGGVLPNINPVLLP 458
TI HGGVLPNINPVLLP
Sbjct: 400 TIXHGGVLPNINPVLLP 450
Score = 40.9 bits (83), Expect(3) = 2e-036
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3 / +1
Query: 150 VSRSVKAGLQFPVGRIG 200
VSRSVKAGLQFPVGRIG
Sbjct: 142 VSRSVKAGLQFPVGRIG 192
Score = 40.5 bits (82), Expect(4) = 8e-024
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 187 TGNWRPAFTERETGFFLG 134
TGNW PA TER+T FFLG
Sbjct: 179 TGNWSPALTERDTAFFLG 126
Score = 29.9 bits (59), Expect(4) = 8e-024
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 245 AGADTLGVATLLEVA 201
AGAD LGVA LLEVA
Sbjct: 236 AGADALGVAALLEVA 192
>dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087P07, full
insert sequence
Length = 747
Score = 155 bits (333), Expect = 7e-036
Identities = 66/103 (64%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK G+Y++RVG GAP GNAARDNK
Sbjct: 165 VSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 344
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL +LL VTIA GGVLPNI+ LLP
Sbjct: 345 KNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLP 473
>dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A07, full
insert sequence
Length = 724
Score = 150 bits (323), Expect = 2e-034
Identities = 64/103 (62%), Positives = 72/103 (69%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
V + KAGLQFPVGRI RYLK G+Y++RVG GAP GNAARDNK
Sbjct: 162 VEMTTKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 341
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
KNRI+PRH+ LA+RNDEEL +LL VTIA GGVLPNI VLLP
Sbjct: 342 KNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLP 470
>ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 405
Score = 149 bits (320), Expect = 4e-034
Identities = 62/102 (60%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 52 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 231
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL +LL VTIA+GGV+PNI+ +LLP
Sbjct: 232 TRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLP 357
>gb|AU184065.1|AU184065 AU184065 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0785, mRNA sequence
Length = 449
Score = 149 bits (319), Expect = 6e-034
Identities = 63/98 (64%), Positives = 71/98 (72%)
Frame = +3 / +2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
VSRS KAGLQFPVGRI RYLK G+Y++RVG GAP GNAARDNK
Sbjct: 155 VSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK 334
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNIN 443
KNRI+PRH+ LA+RNDEEL +LL VTIA GGVLPNI+
Sbjct: 335 KNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIH 448
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full
insert sequence
Length = 1718
Score = 148 bits (318), Expect = 8e-034
Identities = 63/102 (61%), Positives = 72/102 (70%)
Frame = +3 / +1
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 202 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 381
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL KLL G TIA GGV+PNI+ LLP
Sbjct: 382 TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLP 507
>dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A01, full
insert sequence
Length = 733
Score = 148 bits (318), Expect = 8e-034
Identities = 63/102 (61%), Positives = 72/102 (70%)
Frame = +3 / +1
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 166 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 345
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL KLL G TIA GGV+PNI+ LLP
Sbjct: 346 TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLP 471
>dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096P04, full
insert sequence
Length = 824
Score = 148 bits (318), Expect = 8e-034
Identities = 63/102 (61%), Positives = 72/102 (70%)
Frame = +3 / +2
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 167 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 346
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL KLL G TIA GGV+PNI+ LLP
Sbjct: 347 TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLP 472
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full
insert sequence
Length = 823
Score = 148 bits (318), Expect = 8e-034
Identities = 63/102 (61%), Positives = 72/102 (70%)
Frame = +3 / +3
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 201 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 380
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL KLL G TIA GGV+PNI+ LLP
Sbjct: 381 TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLP 506
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 823
Score = 148 bits (318), Expect = 8e-034
Identities = 63/102 (61%), Positives = 72/102 (70%)
Frame = +3 / +3
Query: 153 SRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKK 332
SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK
Sbjct: 201 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 380
Query: 333 NRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
RI+PRH+ LA+RNDEEL KLL G TIA GGV+PNI+ LLP
Sbjct: 381 TRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLP 506
>gb|CB648097.1|CB648097 OSJNEb11F09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11F09 3', mRNA sequence
Length = 799
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 627 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 448
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 447 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 319
>gb|CB681474.1|CB681474 OSJNEf07M04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf07M04 3', mRNA sequence
Length = 860
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / -2
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 676 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 497
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 496 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 368
>gb|CF290894.1|CF290894 14ROOT--01-B17.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-B17, mRNA sequence
Length = 657
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 225 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 404
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 405 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 533
>gb|CF304442.1|CF304442 ABF1--04-P18.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-P18, mRNA sequence
Length = 552
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 195 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 374
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 375 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 503
>dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D11, full
insert sequence
Length = 830
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 204 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 383
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 384 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 512
>ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 830
Score = 148 bits (317), Expect = 1e-033
Identities = 62/103 (60%), Positives = 74/103 (71%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GNAARDNK
Sbjct: 204 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 383
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 384 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 512
>gb|AU165979.1|AU165979 AU165979 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30416, mRNA sequence
Length = 535
Score = 146 bits (313), Expect = 4e-033
Identities = 62/83 (74%), Positives = 65/83 (78%)
Frame = +3 / +2
Query: 210 KQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAIRNDEELG 389
K+GRY+QR+GTGAP GNAARDNKKNRIIPRHVLLAIRNDEELG
Sbjct: 2 KKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELG 181
Query: 390 KLLAGVTIAHGGVLPNINPVLLP 458
KLLAGVTIAHGGVLPNINPVLLP
Sbjct: 182 KLLAGVTIAHGGVLPNINPVLLP 250
Score = 108 bits (230), Expect(3) = 3e-025
Identities = 50/88 (56%), Positives = 53/88 (60%)
Frame = -2 / -2
Query: 490 PSLAAATAVFLGSSTGLMLGRTPPCAMVTPAXXXXXXXXXXXXXSTCRGMIRFFLLSRAA 311
P+ AA +AVFLGSSTGLMLG TPPCAMVTPA ST RGMI FFLLS AA
Sbjct: 282 PAAAAFSAVFLGSSTGLMLGSTPPCAMVTPASSLPSSSSFLIASSTWRGMILFFLLSLAA 103
Query: 310 FPANXXXXXXXXXXXXXXXTGAPVPTRW 227
FPA+ TGAPVP RW
Sbjct: 102 FPASSSTSAARYSRTAAR*TGAPVPMRW 19
Score = 24.9 bits (48), Expect(3) = 3e-025
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / -3
Query: 555 TSRPPFWATW 526
TSR P WATW
Sbjct: 320 TSRRPSWATW 291
Score = 24.0 bits (46), Expect(3) = 3e-025
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 245 AGADTLGVATLL 210
AGAD LGVA LL
Sbjct: 37 AGADALGVAALL 2
>gb|CF281327.1|CF281327 14ETL--08-F12.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-F12, mRNA sequence
Length = 617
Score = 146 bits (313), Expect = 4e-033
Identities = 61/103 (59%), Positives = 73/103 (70%)
Frame = +3 / +3
Query: 150 VSRSVKAGLQFPVGRIGRYLKQGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNK 329
+SRS KAGLQFPVGRI R+LK G+Y++RVG GAP GN ARDNK
Sbjct: 195 MSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNVARDNK 374
Query: 330 KNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLP 458
K RI+PRH+ LA+RNDEEL +LL VTIA GGV+PNI+ +LLP
Sbjct: 375 KTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 503
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,028,263,498
Number of Sequences: 438736
Number of extensions: 53144135
Number of successful extensions: 678215
Number of sequences better than 1.0e-020: 162
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 213180049075
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)