TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.2
(850 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA... 271 8e-071
ref|NM_191361.1| Oryza sativa (japonica cultivar-group), p... 270 1e-070
gb|AACV01002400.1| Oryza sativa (japonica cultivar-group) c... 160 5e-050
dbj|AP003239.3| Oryza sativa (japonica cultivar-group) geno... 160 2e-048
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 160 3e-045
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 160 1e-037
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 160 1e-037
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 160 1e-037
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 160 1e-037
dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA... 123 1e-036
dbj|AK101220.1| Oryza sativa (japonica cultivar-group) cDNA... 112 2e-032
ref|XM_464326.1| Oryza sativa (japonica cultivar-group), mRNA 112 2e-032
dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA... 98 3e-028
ref|XM_482629.1| Oryza sativa (japonica cultivar-group), mRNA 98 4e-028
gb|AACV01025341.1| Oryza sativa (japonica cultivar-group) c... 54 8e-024
emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC O... 54 3e-022
emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC O... 54 5e-022
>dbj|AK068983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001N13, full
insert sequence
Length = 1250
Score = 271 bits (586), Expect = 8e-071
Identities = 118/162 (72%), Positives = 128/162 (79%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A SINI WKMYFD LP SDGN GSSAL CLQ S+RI YG
Sbjct: 550 YPKVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQALSKRIHYG 729
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQESPEAY PAIIAQD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+
Sbjct: 730 KFVAEAKFQESPEAYMPAIIAQDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAE 909
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
D G+PP+YKIRPSLVAELYSYRIMPLTKEV+VAYLLRRLD*+
Sbjct: 910 DNGAPPMYKIRPSLVAELYSYRIMPLTKEVQVAYLLRRLD*L 1035
Score = 202 bits (435), Expect = 5e-050
Identities = 103/163 (63%), Positives = 110/163 (67%)
Frame = +3 / -1
Query: 324 HTQSSLLSKYATSTSLVSGMIL*LYSSATKXXXXXXXXXXXXXXAPMFTSCPKILALAST 503
+ QS+LLSK AT TSLVSGMIL*LYSSATK AP TSCPKILALAST
Sbjct: 1037 NNQSNLLSK*AT*TSLVSGMIL*LYSSATKLGLILYIGGAPLSSAPKSTSCPKILALAST 858
Query: 504 LCSTARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXXXCKQVXSQR 683
LCS ARSTV VRR +S*S+S AI+AG+*ASGDS*NLA N P ILL CKQ+ SQR
Sbjct: 857 LCSIARSTVS*VRRCIS*SQSCAIIAGM*ASGDS*NLASATNLP**ILLESACKQIVSQR 678
Query: 684 ALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
ALDP LPSL GR SKYIFQ ILI SA GC Y
Sbjct: 677 ALDP*LPSLPSFTNLGRSSSKYIFQISLLILIESAIGCKTFGY 549
Score = 156 bits (336), Expect = 2e-036
Identities = 78/156 (50%), Positives = 88/156 (56%)
Frame = +2 / -3
Query: 329 SIQPPKQVRDLNLLG*RHDSVAVQLGDQARPDLVDRWAALVLSTNVHLLPEDLGFGLHPV 508
SIQ P+QV LNLLG*RHD VAVQ Q P LV W+A+V S +HLL +DL HP+
Sbjct: 1032 SIQSPQQVGYLNLLG*RHDPVAVQFSHQTGPYLVHWWSAVVFSA*IHLLSKDLSLSFHPM 853
Query: 509 FDSTLHRXXCEKVHELITVLGYYGWRVSFRGLLKLGXXXKLPIXDPSGXXLQAGXXXKXX 688
F+STLHR E+VH LI VL YY VSFR LLKL KL I + G LQA K
Sbjct: 852 FNSTLHRFIGEEVH*LIAVLCYYRRHVSFRRLLKLSLCHKLTIVNSFGERLQADRVTKST 673
Query: 689 XXXXXXXXXXXXXWKXXIKIHFPXXXXDIDRXSXGM 796
WK IKIHFP DI+R S M
Sbjct: 672 GSIITITSFFH*SWKKLIKIHFPNLLVDINRISNRM 565
Score = 153 bits (329), Expect = 2e-035
Identities = 80/162 (49%), Positives = 93/162 (57%)
Frame = -2 / +2
Query: 807 QXXXIPXLXLSISXXXFGKCILMXXFXXXXXXXVMVMLDPVLFXXXPACRXXPEGSXMGS 628
Q I L L IS FGKCILM F VMV++DPVLF ACR P+ M S
Sbjct: 554 QRFCILLLILLISTRRFGKCILMSFFQD**KKEVMVIMDPVLFVTRSACRRSPKEFTMVS 733
Query: 627 XXXXPSFKSPLKLTRQP**PKTVINS*TFSHXKRWSVLSNTGWRPKPRSSGKR*TLVLRT 448
SFKS LKLT ** +T IN T S KRWSVL N GW+ + RS +R L+T
Sbjct: 734 LWQRLSFKSLLKLTCLR**HRTAIN*CTSSPMKRWSVLLNIGWKLRLRSLDRRWI*ALKT 913
Query: 447 RAAHRSTRSGRAWSPSCTATESCR*PRRLRSRTCLGGWIECV 322
A H+ TR G W +CTAT SCR*PRR + TC G WI+C+
Sbjct: 914 TALHQCTR*GPVWWLNCTATGSCR*PRRFK*PTC*GDWIDCL 1039
Score = 151 bits (324), Expect = 1e-034
Identities = 80/161 (49%), Positives = 88/161 (54%)
Frame = +1 / -2
Query: 325 TLNPAS*ASTRPQPPWLAA*FCSCTARRPSSA*SCRPVGCPCP*HQCSPLARRSWLWPPP 504
T+NP S AS +PPWLAA* CSCT + P+ A SC V C P +RS PP
Sbjct: 1036 TINPISSASRLLEPPWLAA*SCSCTVQPPNWALSCTLVERRCLQRLNPPPVQRS*P*LPP 857
Query: 505 CVRQHAPPFXM*EGS*VDHGLGLLWLACKLQGTLETWXXXXTSHXXSFWXXPASRXXXKE 684
V+ HAPPF * G+ VD LL ACKLQ TLET T H FW PASR KE
Sbjct: 856 YVQ*HAPPFHR*GGALVDRSPVLLSQACKLQETLET*PLPQTYHSEFFWRAPASRSCHKE 677
Query: 685 HWIQHYHHXXXXXXXEXXHQNTFSKXXXXY**XQXWDAXXL 807
HWI +YHH E HQNTFSK Y** Q DA L
Sbjct: 676 HWIHNYHHFLLSLILEEAHQNTFSKSPC*Y**NQQ*DAKPL 554
Score = 140 bits (300), Expect = 2e-031
Identities = 80/159 (50%), Positives = 91/159 (57%)
Frame = -3 / +3
Query: 797 ASXX*XYQYXXXXLENVF*XXSSXXXXXXX*W*CWIQCSLXXNLLAGXXQKDXXWEVXXX 618
AS * Y Y LENVF* SS *W* WIQCSL +LLAG QK+ W V
Sbjct: 564 ASYC*FY*YQQGDLENVF**ASSKISERRK*W*LWIQCSL*HDLLAGALQKNSLW*VCGR 743
Query: 617 XQVSRVP*SLHASHNSPRP*STHEPSHIXNGGACCRTQGGGQSQDLRARGEHWC*GQGQP 438
VSRV *SLHA NS ST+ P H+ NGGAC T GG DL G * Q +
Sbjct: 744 G*VSRVS*SLHACDNSTGLRSTNAPPHL*NGGACY*T*GGS*G*DLWTGGGFRR*RQRRS 923
Query: 437 TGLQDQAELGRRAVQLQNHAANQGG*GRVLA*EAGLSVF 321
T +QD+A+ G VQLQ+HAANQGG +LA E GL V+
Sbjct: 924 TNVQDKAQFGG*TVQLQDHAANQGGSSSLLAEEIGLIVY 1040
>ref|NM_191361.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 885
Score = 270 bits (585), Expect = 1e-070
Identities = 118/161 (73%), Positives = 127/161 (78%)
Frame = -1 / +1
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A SINI WKMYFD LP SDGN GSSAL CLQ S+RI YG
Sbjct: 403 YPKVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQALSKRIHYG 582
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAK 452
KF AKFQESPEAY PAIIAQD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+
Sbjct: 583 KFVAEAKFQESPEAYMPAIIAQDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAE 762
Query: 451 DKGSPPVYKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
D G+PP+YKIRPSLVAELYSYRIMPLTKEV+VAYLLRRLD*
Sbjct: 763 DNGAPPMYKIRPSLVAELYSYRIMPLTKEVQVAYLLRRLD* 885
Score = 201 bits (434), Expect = 7e-050
Identities = 103/161 (63%), Positives = 109/161 (67%)
Frame = +3 / -2
Query: 330 QSSLLSKYATSTSLVSGMIL*LYSSATKXXXXXXXXXXXXXXAPMFTSCPKILALASTLC 509
QS+LLSK AT TSLVSGMIL*LYSSATK AP TSCPKILALASTLC
Sbjct: 884 QSNLLSK*AT*TSLVSGMIL*LYSSATKLGLILYIGGAPLSSAPKSTSCPKILALASTLC 705
Query: 510 STARSTVXYVRRFMS*SRSWAIMAGV*ASGDS*NLAXXXNFPXXILLXXXCKQVXSQRAL 689
S ARSTV VRR +S*S+S AI+AG+*ASGDS*NLA N P ILL CKQ+ SQRAL
Sbjct: 704 SIARSTVS*VRRCIS*SQSCAIIAGM*ASGDS*NLASATNLP**ILLESACKQIVSQRAL 525
Query: 690 DPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGCXXXXY 812
DP LPSL GR SKYIFQ ILI SA GC Y
Sbjct: 524 DP*LPSLPSFTNLGRSSSKYIFQISLLILIESAIGCKTFGY 402
Score = 156 bits (336), Expect = 2e-036
Identities = 78/156 (50%), Positives = 88/156 (56%)
Frame = +2 / -1
Query: 329 SIQPPKQVRDLNLLG*RHDSVAVQLGDQARPDLVDRWAALVLSTNVHLLPEDLGFGLHPV 508
SIQ P+QV LNLLG*RHD VAVQ Q P LV W+A+V S +HLL +DL HP+
Sbjct: 885 SIQSPQQVGYLNLLG*RHDPVAVQFSHQTGPYLVHWWSAVVFSA*IHLLSKDLSLSFHPM 706
Query: 509 FDSTLHRXXCEKVHELITVLGYYGWRVSFRGLLKLGXXXKLPIXDPSGXXLQAGXXXKXX 688
F+STLHR E+VH LI VL YY VSFR LLKL KL I + G LQA K
Sbjct: 705 FNSTLHRFIGEEVH*LIAVLCYYRRHVSFRRLLKLSLCHKLTIVNSFGERLQADRVTKST 526
Query: 689 XXXXXXXXXXXXXWKXXIKIHFPXXXXDIDRXSXGM 796
WK IKIHFP DI+R S M
Sbjct: 525 GSIITITSFFH*SWKKLIKIHFPNLLVDINRISNRM 418
Score = 148 bits (317), Expect = 1e-033
Identities = 79/159 (49%), Positives = 90/159 (56%)
Frame = -2 / +2
Query: 807 QXXXIPXLXLSISXXXFGKCILMXXFXXXXXXXVMVMLDPVLFXXXPACRXXPEGSXMGS 628
Q I L L IS FGKCILM F VMV++DPVLF ACR P+ M S
Sbjct: 407 QRFCILLLILLISTRRFGKCILMSFFQD**KKEVMVIMDPVLFVTRSACRRSPKEFTMVS 586
Query: 627 XXXXPSFKSPLKLTRQP**PKTVINS*TFSHXKRWSVLSNTGWRPKPRSSGKR*TLVLRT 448
SFKS LKLT ** +T IN T S KRWSVL N GW+ + RS +R L+T
Sbjct: 587 LWQRLSFKSLLKLTCLR**HRTAIN*CTSSPMKRWSVLLNIGWKLRLRSLDRRWI*ALKT 766
Query: 447 RAAHRSTRSGRAWSPSCTATESCR*PRRLRSRTCLGGWI 331
A H+ TR G W +CTAT SCR*PRR + TC G WI
Sbjct: 767 TALHQCTR*GPVWWLNCTATGSCR*PRRFK*PTC*GDWI 883
Score = 148 bits (317), Expect = 1e-033
Identities = 79/159 (49%), Positives = 86/159 (54%)
Frame = +1 / -3
Query: 331 NPAS*ASTRPQPPWLAA*FCSCTARRPSSA*SCRPVGCPCP*HQCSPLARRSWLWPPPCV 510
NP S AS +PPWLAA* CSCT + P+ A SC V C P +RS PP V
Sbjct: 883 NPISSASRLLEPPWLAA*SCSCTVQPPNWALSCTLVERRCLQRLNPPPVQRS*P*LPPYV 704
Query: 511 RQHAPPFXM*EGS*VDHGLGLLWLACKLQGTLETWXXXXTSHXXSFWXXPASRXXXKEHW 690
+ HAPPF * G+ VD LL ACKLQ TLET T H FW PASR KEHW
Sbjct: 703 Q*HAPPFHR*GGALVDRSPVLLSQACKLQETLET*PLPQTYHSEFFWRAPASRSCHKEHW 524
Query: 691 IQHYHHXXXXXXXEXXHQNTFSKXXXXY**XQXWDAXXL 807
I +YHH E HQNTFSK Y** Q DA L
Sbjct: 523 IHNYHHFLLSLILEEAHQNTFSKSPC*Y**NQQ*DAKPL 407
Score = 138 bits (295), Expect = 1e-030
Identities = 79/156 (50%), Positives = 89/156 (57%)
Frame = -3 / +3
Query: 797 ASXX*XYQYXXXXLENVF*XXSSXXXXXXX*W*CWIQCSLXXNLLAGXXQKDXXWEVXXX 618
AS * Y Y LENVF* SS *W* WIQCSL +LLAG QK+ W V
Sbjct: 417 ASYC*FY*YQQGDLENVF**ASSKISERRK*W*LWIQCSL*HDLLAGALQKNSLW*VCGR 596
Query: 617 XQVSRVP*SLHASHNSPRP*STHEPSHIXNGGACCRTQGGGQSQDLRARGEHWC*GQGQP 438
VSRV *SLHA NS ST+ P H+ NGGAC T GG DL G * Q +
Sbjct: 597 G*VSRVS*SLHACDNSTGLRSTNAPPHL*NGGACY*T*GGS*G*DLWTGGGFRR*RQRRS 776
Query: 437 TGLQDQAELGRRAVQLQNHAANQGG*GRVLA*EAGL 330
T +QD+A+ G VQLQ+HAANQGG +LA E GL
Sbjct: 777 TNVQDKAQFGG*TVQLQDHAANQGGSSSLLAEEIGL 884
>gb|AACV01002400.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002400, whole
genome shotgun sequence
Length = 23210
Score = 160 bits (345), Expect(3) = 5e-050
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / +2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 2306 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 2485
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 2486 RIMPLTKEVQVAYLLRRLD*L 2548
Score = 103 bits (219), Expect(3) = 8e-033
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2 / -2
Query: 329 SIQPPKQVRDLNLLG*RHDSVAVQLGDQARPDLVDRWAALVLSTNVHLLPEDLGFGLHPV 508
SIQ P+QV LNLLG*RHD VAVQ Q P LV W+A+V S +HLL +DL HP+
Sbjct: 2545 SIQSPQQVGYLNLLG*RHDPVAVQFSHQTGPYLVHWWSAVVFSA*IHLLSKDLSLSFHPM 2366
Query: 509 FDSTLHRXXCEKVHELITVLGY 574
F+STLHR E+VH LI VL +
Sbjct: 2365 FNSTLHRFIGEEVH*LIAVLKF 2300
Score = 103 bits (219), Expect(3) = 3e-036
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / -3
Query: 324 HTQSSLLSKYATSTSLVSGMIL*LYSSATKXXXXXXXXXXXXXXAPMFTSCPKILALAST 503
+ QS+LLSK AT TSLVSGMIL*LYSSATK AP TSCPKILALAST
Sbjct: 2550 NNQSNLLSK*AT*TSLVSGMIL*LYSSATKLGLILYIGGAPLSSAPKSTSCPKILALAST 2371
Query: 504 LCSTARSTVXYVRRFMS*SRS 566
LCS ARSTV VRR +S*S+S
Sbjct: 2370 LCSIARSTVS*VRRCIS*SQS 2308
Score = 94.5 bits (200), Expect(2) = 8e-028
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -2 / +3
Query: 567 KTVINS*TFSHXKRWSVLSNTGWRPKPRSSGKR*TLVLRTRAAHRSTRSGRAWSPSCTAT 388
+T IN T S KRWSVL N GW+ + RS +R L+T A H+ TR G W +CTAT
Sbjct: 2307 RTAIN*CTSSPMKRWSVLLNIGWKLRLRSLDRRWI*ALKTTALHQCTR*GPVWWLNCTAT 2486
Query: 387 ESCR*PRRLRSRTCLGGWIECV 322
SCR*PRR + TC G WI+C+
Sbjct: 2487 GSCR*PRRFK*PTC*GDWIDCL 2552
Score = 66.1 bits (138), Expect(3) = 3e-036
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +3 / -3
Query: 660 CKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGC 797
CKQ+ SQRALDP LPSL GR SKYIFQ ILI SA GC
Sbjct: 1779 CKQIVSQRALDP*LPSLPSFTNLGRSSSKYIFQISLLILIESAIGC 1642
Score = 62.5 bits (130), Expect(3) = 5e-050
Identities = 27/46 (58%), Positives = 27/46 (58%)
Frame = -1 / +2
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A SINI WKMYFD LP SDGN GSSAL CLQ
Sbjct: 1643 HPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQ 1780
Score = 61.1 bits (127), Expect(2) = 8e-028
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -1 / +2
Query: 703 GNAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
GN L + +Q S+RI YGKF AKFQESPEAY PAIIAQ
Sbjct: 2027 GNYAHLFLFSCSIIQALSKRIHYGKFVAEAKFQESPEAYMPAIIAQ 2164
Score = 58.3 bits (121), Expect(3) = 8e-033
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +1 / -1
Query: 658 PASRXXXKEHWIQHYHHXXXXXXXEXXHQNTFSKXXXXY**XQXWDA 798
PASR KEHWI +YHH E HQNTFSK Y** Q DA
Sbjct: 1781 PASRSCHKEHWIHNYHHFLLSLILEEAHQNTFSKSPC*Y**NQQ*DA 1641
Score = 38.6 bits (78), Expect(3) = 3e-036
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3 / -3
Query: 558 SRSWAIMAGV*ASGDS*NLAXXXNFPXXILL 650
+++ AI+AG+*ASGDS*NLA N P ILL
Sbjct: 2172 TQTCAIIAGM*ASGDS*NLASATNLP**ILL 2080
Score = 35.0 bits (70), Expect(3) = 8e-033
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1 / -1
Query: 556 DHGLGLLWLACKLQGTLETWXXXXTSHXXSFWXXP 660
+H LL ACKLQ TLET T H FW P
Sbjct: 2174 EHKPVLLSQACKLQETLET*PLPQTYHSEFFWRAP 2070
Score = 31.3 bits (62), Expect(3) = 5e-050
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3 / +1
Query: 659 GXXQKDXXWEVXXXXQVSRVP*SLHASHNS 570
G QK+ W V VSRV *SLHA NS
Sbjct: 2071 GALQKNSLW*VCGRG*VSRVS*SLHACDNS 2160
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0403C05
Length = 151085
Score = 160 bits (345), Expect(3) = 2e-048
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -1
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 36302 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 36123
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 36122 RIMPLTKEVQVAYLLRRLD*L 36060
Score = 103 bits (219), Expect(3) = 3e-031
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2 / +3
Query: 329 SIQPPKQVRDLNLLG*RHDSVAVQLGDQARPDLVDRWAALVLSTNVHLLPEDLGFGLHPV 508
SIQ P+QV LNLLG*RHD VAVQ Q P LV W+A+V S +HLL +DL HP+
Sbjct: 36063 SIQSPQQVGYLNLLG*RHDPVAVQFSHQTGPYLVHWWSAVVFSA*IHLLSKDLSLSFHPM 36242
Query: 509 FDSTLHRXXCEKVHELITVLGY 574
F+STLHR E+VH LI VL +
Sbjct: 36243 FNSTLHRFIGEEVH*LIAVLKF 36308
Score = 103 bits (219), Expect(3) = 1e-034
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / +1
Query: 324 HTQSSLLSKYATSTSLVSGMIL*LYSSATKXXXXXXXXXXXXXXAPMFTSCPKILALAST 503
+ QS+LLSK AT TSLVSGMIL*LYSSATK AP TSCPKILALAST
Sbjct: 36058 NNQSNLLSK*AT*TSLVSGMIL*LYSSATKLGLILYIGGAPLSSAPKSTSCPKILALAST 36237
Query: 504 LCSTARSTVXYVRRFMS*SRS 566
LCS ARSTV VRR +S*S+S
Sbjct: 36238 LCSIARSTVS*VRRCIS*SQS 36300
Score = 94.5 bits (200), Expect(2) = 5e-027
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -2 / -2
Query: 567 KTVINS*TFSHXKRWSVLSNTGWRPKPRSSGKR*TLVLRTRAAHRSTRSGRAWSPSCTAT 388
+T IN T S KRWSVL N GW+ + RS +R L+T A H+ TR G W +CTAT
Sbjct: 36301 RTAIN*CTSSPMKRWSVLLNIGWKLRLRSLDRRWI*ALKTTALHQCTR*GPVWWLNCTAT 36122
Query: 387 ESCR*PRRLRSRTCLGGWIECV 322
SCR*PRR + TC G WI+C+
Sbjct: 36121 GSCR*PRRFK*PTC*GDWIDCL 36056
Score = 66.1 bits (138), Expect(3) = 1e-034
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +3 / +1
Query: 660 CKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGC 797
CKQ+ SQRALDP LPSL GR SKYIFQ ILI SA GC
Sbjct: 36829 CKQIVSQRALDP*LPSLPSFTNLGRSSSKYIFQISLLILIESAIGC 36966
Score = 62.5 bits (130), Expect(3) = 2e-048
Identities = 27/46 (58%), Positives = 27/46 (58%)
Frame = -1 / -1
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A SINI WKMYFD LP SDGN GSSAL CLQ
Sbjct: 36965 HPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQ 36828
Score = 61.1 bits (127), Expect(2) = 5e-027
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -1 / -1
Query: 703 GNAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
GN L + +Q S+RI YGKF AKFQESPEAY PAIIAQ
Sbjct: 36581 GNYAHLFLFSCSIIQALSKRIHYGKFVAEAKFQESPEAYMPAIIAQ 36444
Score = 58.3 bits (121), Expect(3) = 3e-031
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +1 / +2
Query: 658 PASRXXXKEHWIQHYHHXXXXXXXEXXHQNTFSKXXXXY**XQXWDA 798
PASR KEHWI +YHH E HQNTFSK Y** Q DA
Sbjct: 36827 PASRSCHKEHWIHNYHHFLLSLILEEAHQNTFSKSPC*Y**NQQ*DA 36967
Score = 38.6 bits (78), Expect(3) = 1e-034
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3 / +1
Query: 558 SRSWAIMAGV*ASGDS*NLAXXXNFPXXILL 650
+++ AI+AG+*ASGDS*NLA N P ILL
Sbjct: 36436 TQTCAIIAGM*ASGDS*NLASATNLP**ILL 36528
Score = 35.0 bits (70), Expect(3) = 3e-031
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1 / +2
Query: 556 DHGLGLLWLACKLQGTLETWXXXXTSHXXSFWXXP 660
+H LL ACKLQ TLET T H FW P
Sbjct: 36434 EHKPVLLSQACKLQETLET*PLPQTYHSEFFWRAP 36538
Score = 31.3 bits (62), Expect(3) = 2e-048
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -3 / -3
Query: 659 GXXQKDXXWEVXXXXQVSRVP*SLHASHNS 570
G QK+ W V VSRV *SLHA NS
Sbjct: 36537 GALQKNSLW*VCGRG*VSRVS*SLHACDNS 36448
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 160 bits (345), Expect(2) = 3e-045
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 6693602 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 6693423
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 6693422 RIMPLTKEVQVAYLLRRLD*L 6693360
Score = 103 bits (219), Expect(3) = 2e-027
Identities = 47/82 (57%), Positives = 56/82 (68%)
Frame = +2 / +3
Query: 329 SIQPPKQVRDLNLLG*RHDSVAVQLGDQARPDLVDRWAALVLSTNVHLLPEDLGFGLHPV 508
SIQ P+QV LNLLG*RHD VAVQ Q P LV W+A+V S +HLL +DL HP+
Sbjct: 6693363 SIQSPQQVGYLNLLG*RHDPVAVQFSHQTGPYLVHWWSAVVFSA*IHLLSKDLSLSFHPM 6693542
Query: 509 FDSTLHRXXCEKVHELITVLGY 574
F+STLHR E+VH LI VL +
Sbjct: 6693543 FNSTLHRFIGEEVH*LIAVLKF 6693608
Score = 103 bits (219), Expect(3) = 9e-031
Identities = 54/81 (66%), Positives = 58/81 (71%)
Frame = +3 / +1
Query: 324 HTQSSLLSKYATSTSLVSGMIL*LYSSATKXXXXXXXXXXXXXXAPMFTSCPKILALAST 503
+ QS+LLSK AT TSLVSGMIL*LYSSATK AP TSCPKILALAST
Sbjct: 6693358 NNQSNLLSK*AT*TSLVSGMIL*LYSSATKLGLILYIGGAPLSSAPKSTSCPKILALAST 6693537
Query: 504 LCSTARSTVXYVRRFMS*SRS 566
LCS ARSTV VRR +S*S+S
Sbjct: 6693538 LCSIARSTVS*VRRCIS*SQS 6693600
Score = 94.5 bits (200), Expect(2) = 4e-025
Identities = 42/82 (51%), Positives = 52/82 (63%)
Frame = -2 / -3
Query: 567 KTVINS*TFSHXKRWSVLSNTGWRPKPRSSGKR*TLVLRTRAAHRSTRSGRAWSPSCTAT 388
+T IN T S KRWSVL N GW+ + RS +R L+T A H+ TR G W +CTAT
Sbjct: 6693601 RTAIN*CTSSPMKRWSVLLNIGWKLRLRSLDRRWI*ALKTTALHQCTR*GPVWWLNCTAT 6693422
Query: 387 ESCR*PRRLRSRTCLGGWIECV 322
SCR*PRR + TC G WI+C+
Sbjct: 6693421 GSCR*PRRFK*PTC*GDWIDCL 6693356
Score = 66.1 bits (138), Expect(3) = 9e-031
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +3 / +1
Query: 660 CKQVXSQRALDPALPSLXXXXXXGRXXSKYIFQXXXXILIXSAXGC 797
CKQ+ SQRALDP LPSL GR SKYIFQ ILI SA GC
Sbjct: 6694129 CKQIVSQRALDP*LPSLPSFTNLGRSSSKYIFQISLLILIESAIGC 6694266
Score = 62.5 bits (130), Expect(2) = 3e-045
Identities = 27/46 (58%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A SINI WKMYFD LP SDGN GSSAL CLQ
Sbjct: 6694265 HPIADSININKEIWKMYFDELLPRLVKEGSDGNYGSSALCDTICLQ 6694128
Score = 61.1 bits (127), Expect(2) = 4e-025
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -1 / -2
Query: 703 GNAGSSALXXXTCLQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQ 566
GN L + +Q S+RI YGKF AKFQESPEAY PAIIAQ
Sbjct: 6693881 GNYAHLFLFSCSIIQALSKRIHYGKFVAEAKFQESPEAYMPAIIAQ 6693744
Score = 58.3 bits (121), Expect(3) = 2e-027
Identities = 26/47 (55%), Positives = 27/47 (57%)
Frame = +1 / +2
Query: 658 PASRXXXKEHWIQHYHHXXXXXXXEXXHQNTFSKXXXXY**XQXWDA 798
PASR KEHWI +YHH E HQNTFSK Y** Q DA
Sbjct: 6694127 PASRSCHKEHWIHNYHHFLLSLILEEAHQNTFSKSPC*Y**NQQ*DA 6694267
Score = 38.6 bits (78), Expect(3) = 9e-031
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3 / +1
Query: 558 SRSWAIMAGV*ASGDS*NLAXXXNFPXXILL 650
+++ AI+AG+*ASGDS*NLA N P ILL
Sbjct: 6693736 TQTCAIIAGM*ASGDS*NLASATNLP**ILL 6693828
Score = 35.0 bits (70), Expect(3) = 2e-027
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1 / +2
Query: 556 DHGLGLLWLACKLQGTLETWXXXXTSHXXSFWXXP 660
+H LL ACKLQ TLET T H FW P
Sbjct: 6693734 EHKPVLLSQACKLQETLET*PLPQTYHSEFFWRAP 6693838
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 160 bits (345), Expect = 1e-037
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 32246219 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 32246040
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 32246039 RIMPLTKEVQVAYLLRRLD*L 32245977
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 160 bits (345), Expect = 1e-037
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 6600363 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 6600184
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 6600183 RIMPLTKEVQVAYLLRRLD*L 6600121
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 160 bits (345), Expect = 1e-037
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 31802084 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 31801905
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 31801904 RIMPLTKEVQVAYLLRRLD*L 31801842
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 160 bits (345), Expect = 1e-037
Identities = 68/81 (83%), Positives = 77/81 (95%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNIGAKDKGSPPVYKIRPSLVAELYSY 389
QD DQLM+LLT TVERA+EHRVEAKAKIFGQEV++GA+D G+PP+YKIRPSLVAELYSY
Sbjct: 32165549 QDCDQLMHLLTYETVERAIEHRVEAKAKIFGQEVDLGAEDNGAPPMYKIRPSLVAELYSY 32165370
Query: 388 RIMPLTKEVEVAYLLRRLD*V 326
RIMPLTKEV+VAYLLRRLD*+
Sbjct: 32165369 RIMPLTKEVQVAYLLRRLD*L 32165307
>dbj|AK105512.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E07, full
insert sequence
Length = 1348
Score = 123 bits (263), Expect(2) = 1e-036
Identities = 56/116 (48%), Positives = 67/116 (57%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y HP A +INI W +YF LP SDGN GSSA LQ S+RI YG
Sbjct: 588 YENVLHPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQALSKRIHYG 767
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVN 464
K+ AKFQ +P+ YTPAI+ +D D+LM LLT VE V RV +KA FGQ V+
Sbjct: 768 KYVAEAKFQGAPDTYTPAILNKDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVS 935
Score = 54.2 bits (112), Expect(2) = 1e-036
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -1 / +3
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
KI P L ELY IMPLTKEV+V YLL+RLD*V
Sbjct: 963 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD*V 1064
>dbj|AK101220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031C20, full
insert sequence
Length = 1435
Score = 112 bits (240), Expect(2) = 2e-032
Identities = 48/117 (41%), Positives = 64/117 (54%)
Frame = -1 / +3
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A S+++ WKMYF+ LP DGN + CL+ SRRI G
Sbjct: 351 YPKVLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKALSRRIHIG 530
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNI 461
K+ KF+++ + Y+P I A+D LMNLLT VE V+ RVE KA+IFGQ V +
Sbjct: 531 KYVAEVKFKDASQDYSPLIRAKDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTL 701
Score = 51.0 bits (105), Expect(2) = 2e-032
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -1 / +3
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
K+ P ++++LY +MPLTK+VEV YLLRRLD*
Sbjct: 750 KVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 848
>ref|XM_464326.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1433
Score = 112 bits (240), Expect(2) = 2e-032
Identities = 48/117 (41%), Positives = 64/117 (54%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
Y H A S+++ WKMYF+ LP DGN + CL+ SRRI G
Sbjct: 350 YPKVLHSFASSVSVNDAIWKMYFNELLPLFTVDGDDGNYAETVALDFACLKALSRRIHIG 529
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNI 461
K+ KF+++ + Y+P I A+D LMNLLT VE V+ RVE KA+IFGQ V +
Sbjct: 530 KYVAEVKFKDASQDYSPLIRAKDTKALMNLLTFKAVEEKVKRRVEKKARIFGQNVTL 700
Score = 51.0 bits (105), Expect(2) = 2e-032
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -1 / +2
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD* 329
K+ P ++++LY +MPLTK+VEV YLLRRLD*
Sbjct: 749 KVNPEVLSKLYDLWVMPLTKDVEVEYLLRRLD* 847
>dbj|AK069725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027D10, full
insert sequence
Length = 1043
Score = 98.2 bits (208), Expect(2) = 3e-028
Identities = 42/117 (35%), Positives = 58/117 (49%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
+ + A +N+ W MYF+ LP +DGN ++ CLQ SRRI YG
Sbjct: 431 FTTELYSAAALVNVNDAIWSMYFNELLPLLAKNGNDGNYAATVSSDLVCLQALSRRINYG 610
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNI 461
++ KF + YT I +D D LM LLT E V+ RV+ KA +FGQ V +
Sbjct: 611 RYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTSEAQEDVVKRRVQKKAMVFGQNVTL 781
Score = 51.5 bits (106), Expect(2) = 3e-028
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
+K+ PSLV +LY ++PLTK+VEV YLL RLD*+
Sbjct: 827 FKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD*I 931
>ref|XM_482629.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1043
Score = 97.7 bits (207), Expect(2) = 4e-028
Identities = 42/117 (35%), Positives = 57/117 (48%)
Frame = -1 / +2
Query: 811 YXXXXHPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQXXSRRIXYG 632
+ + A +N+ W MYF+ LP DGN ++ CLQ SRRI YG
Sbjct: 431 FTTELYSAAALVNVNDAIWSMYFNELLPLLAKNGDDGNYAATVSSDLVCLQALSRRINYG 610
Query: 631 KFXXXAKFQESPEAYTPAIIAQDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVNI 461
++ KF + YT I +D D LM LLT E V+ RV+ KA +FGQ V +
Sbjct: 611 RYVAEVKFIGDQQNYTTLIRNKDTDALMKLLTSEAQEDVVKRRVQKKAMVFGQNVTL 781
Score = 51.5 bits (106), Expect(2) = 4e-028
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 430 YKIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
+K+ PSLV +LY ++PLTK+VEV YLL RLD*+
Sbjct: 827 FKVDPSLVYKLYDKWVIPLTKQVEVEYLLHRLD*I 931
>gb|AACV01025341.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025341, whole
genome shotgun sequence
Length = 39984
Score = 54.2 bits (112), Expect(4) = 8e-024
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -1 / +3
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
KI P L ELY IMPLTKEV+V YLL+RLD*V
Sbjct: 6852 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD*V 6953
Score = 49.6 bits (102), Expect(4) = 8e-024
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / +3
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQ 554
LQ S+RI YGK+ AKFQ +P+ YTPAI+ + R Q
Sbjct: 6408 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNKARIQ 6518
Score = 47.8 bits (98), Expect(4) = 8e-024
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = -1 / +1
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A +INI W +YF LP SDGN GSSA LQ
Sbjct: 5971 HPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQ 6108
Score = 39.1 bits (79), Expect(4) = 8e-024
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVN 464
QD D+LM LLT VE V RV +KA FGQ V+
Sbjct: 6720 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVS 6824
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 144767
Score = 54.2 bits (112), Expect(4) = 3e-022
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -1 / -3
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
KI P L ELY IMPLTKEV+V YLL+RLD*V
Sbjct: 16575 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD*V 16474
Score = 49.6 bits (102), Expect(4) = 3e-022
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / -3
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQ 554
LQ S+RI YGK+ AKFQ +P+ YTPAI+ + R Q
Sbjct: 17019 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNKARIQ 16909
Score = 47.8 bits (98), Expect(4) = 3e-022
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = -1 / -1
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A +INI W +YF LP SDGN GSSA LQ
Sbjct: 17456 HPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQ 17319
Score = 39.1 bits (79), Expect(4) = 3e-022
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1 / -3
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVN 464
QD D+LM LLT VE V RV +KA FGQ V+
Sbjct: 16707 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVS 16603
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 176388
Score = 54.2 bits (112), Expect(4) = 5e-022
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -1 / -2
Query: 427 KIRPSLVAELYSYRIMPLTKEVEVAYLLRRLD*V 326
KI P L ELY IMPLTKEV+V YLL+RLD*V
Sbjct: 130790 KIEPELAVELYDKWIMPLTKEVQVQYLLKRLD*V 130689
Score = 49.6 bits (102), Expect(4) = 5e-022
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 664 LQXXSRRIXYGKFXXXAKFQESPEAYTPAIIAQDRDQ 554
LQ S+RI YGK+ AKFQ +P+ YTPAI+ + R Q
Sbjct: 131234 LQALSKRIHYGKYVAEAKFQGAPDTYTPAILNKARIQ 131124
Score = 47.8 bits (98), Expect(4) = 5e-022
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = -1 / -3
Query: 796 HPXAXSINIXXXXWKMYFDXXLPXXXXXXSDGNAGSSALXXXTCLQ 659
HP A +INI W +YF LP SDGN GSSA LQ
Sbjct: 131671 HPAAANININKRIWDVYFGDLLPRLVKEGSDGNCGSSACWDMLILQ 131534
Score = 39.1 bits (79), Expect(4) = 5e-022
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 568 QDRDQLMNLLTXXTVERAVEHRVEAKAKIFGQEVN 464
QD D+LM LLT VE V RV +KA FGQ V+
Sbjct: 130922 QDSDKLMELLTFAKVEDDVRARVMSKAMTFGQVVS 130818
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,156,415,704
Number of Sequences: 438736
Number of extensions: 90861758
Number of successful extensions: 437530
Number of sequences better than 1.0e-020: 21
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 202392097463
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)