TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455862.2.1
(712 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing ... 111 2e-050
dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-050
ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 111 8e-050
dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-050
ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-... 111 8e-050
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 111 1e-049
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 111 1e-049
dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXR... 111 1e-049
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 111 1e-049
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-048
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-048
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 109 2e-048
gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (j... 106 1e-045
gb|D40451.1|D40451 RICS2440A Rice shoot Oryza sativa (japon... 111 8e-037
gb|AU031503.1|AU031503 AU031503 Rice cDNA from immature lea... 111 9e-034
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 82 6e-031
emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromoso... 82 6e-031
dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA... 82 6e-031
ref|XM_473793.1| Oryza sativa (japonica cultivar-group), p... 82 6e-031
gb|AU032208.1|AU032208 AU032208 Rice root Oryza sativa (jap... 77 5e-030
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 83 1e-026
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 83 1e-026
dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA... 83 1e-026
gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) c... 80 7e-026
dbj|AP003771.2| Oryza sativa (japonica cultivar-group) geno... 80 2e-025
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 80 1e-024
dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA... 80 2e-024
dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA... 80 2e-024
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 77 2e-024
gb|AACV01010438.1| Oryza sativa (japonica cultivar-group) c... 77 2e-024
gb|AU184072.1|AU184072 AU184072 Rice root Oryza sativa (jap... 109 2e-023
gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (j... 76 4e-023
gb|AU181176.1|AU181176 AU181176 Rice callus (2001) Oryza sa... 110 4e-023
gb|AU173330.1|AU173330 AU173330 Rice root Oryza sativa (jap... 109 6e-023
gb|CF303459.1|CF303459 ABF1--02-F05.g1 ABF3-overexpressing ... 111 9e-023
emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromoso... 65 4e-022
gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) c... 65 4e-022
dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA... 65 4e-022
ref|XM_473788.1| Oryza sativa (japonica cultivar-group), p... 65 4e-022
gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (j... 65 4e-022
dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA... 74 6e-022
gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (j... 74 6e-022
gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (j... 72 3e-021
gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (j... 74 1e-020
>gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-I16, mRNA sequence
Length = 588
Score = 111 bits (237), Expect(3) = 2e-050
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 67 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 228
Score = 109 bits (233), Expect(3) = 2e-050
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 238 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 417
Query: 343 *F 348
*F
Sbjct: 418 *F 423
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -2
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 422 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 243
Query: 167 SG 162
+G
Sbjct: 242 AG 237
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -2
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 206 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 69
Score = 23.1 bits (44), Expect(3) = 2e-050
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 531 PCTFCHPFV 557
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full
insert sequence
Length = 1111
Score = 111 bits (237), Expect(3) = 8e-050
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 568 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 729
Score = 109 bits (233), Expect(3) = 8e-050
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 739 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 918
Query: 343 *F 348
*F
Sbjct: 919 *F 924
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 923 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 744
Query: 167 SG 162
+G
Sbjct: 743 AG 738
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 707 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 570
Score = 23.1 bits (44), Expect(3) = 8e-050
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 1032 PCTFCHPFV 1058
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1111
Score = 111 bits (237), Expect(3) = 8e-050
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 568 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 729
Score = 109 bits (233), Expect(3) = 8e-050
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 739 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 918
Query: 343 *F 348
*F
Sbjct: 919 *F 924
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 923 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 744
Query: 167 SG 162
+G
Sbjct: 743 AG 738
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 707 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 570
Score = 23.1 bits (44), Expect(3) = 8e-050
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 1032 PCTFCHPFV 1058
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full
insert sequence
Length = 1127
Score = 111 bits (237), Expect(3) = 8e-050
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 563 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 724
Score = 109 bits (233), Expect(3) = 8e-050
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 734 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 913
Query: 343 *F 348
*F
Sbjct: 914 *F 919
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 918 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 739
Query: 167 SG 162
+G
Sbjct: 738 AG 733
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 702 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 565
Score = 23.1 bits (44), Expect(3) = 8e-050
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 1027 PCTFCHPFV 1053
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA
Length = 1127
Score = 111 bits (237), Expect(3) = 8e-050
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 563 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 724
Score = 109 bits (233), Expect(3) = 8e-050
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 734 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 913
Query: 343 *F 348
*F
Sbjct: 914 *F 919
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 918 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 739
Query: 167 SG 162
+G
Sbjct: 738 AG 733
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 702 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 565
Score = 23.1 bits (44), Expect(3) = 8e-050
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +1
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 1027 PCTFCHPFV 1053
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 111 bits (237), Expect(2) = 1e-049
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 8322334 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 8322495
Score = 109 bits (233), Expect(2) = 1e-049
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 8322505 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 8322684
Query: 343 *F 348
*F
Sbjct: 8322685 *F 8322690
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 111 bits (237), Expect(2) = 1e-049
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 8089860 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 8090021
Score = 109 bits (233), Expect(2) = 1e-049
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +3
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 8090031 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 8090210
Query: 343 *F 348
*F
Sbjct: 8090211 *F 8090216
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
endotransglycosylase-related protein 5, complete cds
Length = 1280
Score = 111 bits (237), Expect(3) = 1e-049
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 559 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 720
Score = 109 bits (233), Expect(3) = 1e-049
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 730 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 909
Query: 343 *F 348
*F
Sbjct: 910 *F 915
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 914 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 735
Query: 167 SG 162
+G
Sbjct: 734 AG 729
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -1
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 698 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 561
Score = 23.1 bits (44), Expect(3) = 1e-049
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 1023 PCTFCHPFV 1049
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 111 bits (237), Expect(2) = 1e-049
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 62443 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 62604
Score = 109 bits (233), Expect(2) = 1e-049
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 62614 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 62793
Query: 343 *F 348
*F
Sbjct: 62794 *F 62799
Score = 70.3 bits (147), Expect(2) = 5e-024
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -2
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 62798 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 62619
Query: 167 SG 162
+G
Sbjct: 62618 AG 62613
Score = 64.8 bits (135), Expect(2) = 5e-024
Identities = 29/46 (63%), Positives = 32/46 (69%)
Frame = -3 / -2
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVAC+ +G GYARS Y
Sbjct: 62582 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSY 62445
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 109 bits (233), Expect(2) = 2e-048
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / -2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 35886695 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 35886516
Query: 343 *F 348
*F
Sbjct: 35886515 *F 35886510
Score = 107 bits (228), Expect(2) = 2e-048
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1 / -2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM + ATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 35886866 KYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 35886705
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 109 bits (233), Expect(2) = 2e-048
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / -2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 10684974 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 10684795
Query: 343 *F 348
*F
Sbjct: 10684794 *F 10684789
Score = 107 bits (228), Expect(2) = 2e-048
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1 / -2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM + ATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 10685145 KYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 10684984
>gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002670, whole
genome shotgun sequence
Length = 40539
Score = 109 bits (233), Expect(2) = 2e-048
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 6221 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 6400
Query: 343 *F 348
*F
Sbjct: 6401 *F 6406
Score = 107 bits (228), Expect(2) = 2e-048
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM + ATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 6050 KYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 6211
Score = 70.3 bits (147), Expect(2) = 1e-022
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M* A ATVP SA SS R I VP+G P
Sbjct: 6405 NHLR*HSAGKPWGKRQPSAQ*L*DM*LRSAHATVPSSAPSSSRWIHADVPSGHHDDDHPP 6226
Query: 167 SG 162
+G
Sbjct: 6225 AG 6220
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -3 / -1
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSVA + +G GYARS Y
Sbjct: 6189 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVASSLIGLLCGYARSSY 6052
>gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14I12 3', mRNA sequence
Length = 595
Score = 106 bits (226), Expect(2) = 1e-045
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = +1 / -3
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
CP GT W+ R+LD AE GTVAWA + YM YNYC DGWRFPQGFPAEC R *F
Sbjct: 353 CPEGTSAWIHRELDGAELGTVAWAERKYMSYNYCADGWRFPQGFPAECYRK*F 195
Score = 101 bits (215), Expect(2) = 1e-045
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +1 / -3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
LAYP KPM +H TLWDGSYWAT+ G VK+DWS APF VSYRGYS + CV
Sbjct: 539 LAYPQSKPMRLHVTLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNGCV 390
Score = 67.0 bits (140), Expect(2) = 8e-022
Identities = 35/62 (56%), Positives = 38/62 (61%)
Frame = -3 / +1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
N LR HSAGKP G RQPS+Q*L* M A ATVP SA SS R I VP+G P
Sbjct: 196 NHLR*HSAGKPWGKRQPSAQ*L*DMYLRSAHATVPSSAPSSSRWIHADVPSGHHDYDHPP 375
Query: 167 SG 162
+G
Sbjct: 376 AG 381
Score = 60.6 bits (126), Expect(2) = 8e-022
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = -3 / +1
Query: 140 PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARSGY 3
PR +T GA QS T PC VAQ*LPSHSV C+ +G GYAR Y
Sbjct: 412 PRYDTTNGAPLQSILTSPCLVAQ*LPSHSVTCSLIGLLCGYARPSY 549
>gb|D40451.1|D40451 RICS2440A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 392
Score = 111 bits (237), Expect(2) = 8e-037
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 59 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 220
Score = 66.6 bits (139), Expect(2) = 8e-037
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +1 / +2
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFP 324
P G CP GT W+ R+LD AE GTVAWA +NYM YNY GFP
Sbjct: 230 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYLRRRLAVSPGFP 391
>gb|AU031503.1|AU031503 AU031503 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61752_1A, mRNA sequence
Length = 627
Score = 111 bits (237), Expect(4) = 9e-034
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 61 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 222
Score = 47.3 bits (97), Expect(4) = 9e-034
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +1 / +2
Query: 148 ADACVPDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQG 318
A +P GR P R D AE YM YNYC DGW P G
Sbjct: 218 ASTTIPPAGGRRRGAPRARRRGSXASFDGAESAPSRGPSATYMSYNYCADGWALPPG 388
Score = 23.5 bits (45), Expect(4) = 9e-034
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 309 PAGLPRRVLPQL 344
P GLPRRVL Q+
Sbjct: 381 PQGLPRRVLXQV 416
Score = 23.1 bits (44), Expect(4) = 9e-034
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 531 PCTFCHPFV 557
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 81.7 bits (172), Expect(2) = 6e-031
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1 / -2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
YP G+ M VHA+LW+G +WAT+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 451467 YPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 451309
Score = 76.7 bits (161), Expect(2) = 6e-031
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / -2
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 451227 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 451102
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 413190 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 413053
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / -2
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 413013 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 412897
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
complete sequence
Length = 129037
Score = 81.7 bits (172), Expect(2) = 6e-031
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
YP G+ M VHA+LW+G +WAT+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 30668 YPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 30510
Score = 76.7 bits (161), Expect(2) = 6e-031
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / -3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 30428 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 30303
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
insert sequence
Length = 1234
Score = 81.7 bits (172), Expect(2) = 6e-031
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1 / +3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
YP G+ M VHA+LW+G +WAT+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 639 YPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 797
Score = 76.7 bits (161), Expect(2) = 6e-031
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +3
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 879 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 1004
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 966
Score = 81.7 bits (172), Expect(2) = 6e-031
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
YP G+ M VHA+LW+G +WAT+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 571 YPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 729
Score = 76.7 bits (161), Expect(2) = 6e-031
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 811 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 936
>gb|AU032208.1|AU032208 AU032208 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3694_8Z, mRNA sequence
Length = 560
Score = 77.1 bits (162), Expect(3) = 5e-030
Identities = 30/62 (48%), Positives = 36/62 (58%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DG P+ P + +
Sbjct: 115 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGGASPRASPPSATAS 294
Query: 343 *F 348
F
Sbjct: 295 DF 300
Score = 74.8 bits (157), Expect(3) = 5e-030
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +1 / +1
Query: 58 WDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
WDGS WAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 1 WDGSXWATRHGDVKIDWSGAPFVVSYRGYSTNACV 105
Score = 23.1 bits (44), Expect(3) = 5e-030
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 407 PCTFCHPFV 433
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 83.1 bits (175), Expect(2) = 1e-026
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDGR 180
+A+P +PM ++++LW+ WATQ G+VK DW+ APF+ SYRG+ ADACV GR
Sbjct: 6238919 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAGGR 6238752
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 6215809 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 6215958
Score = 74.4 bits (156), Expect(2) = 5e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 6227870 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 6228016
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / +1
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
C G WM R++D W T+ W R NYM Y+YC D RFP FPAEC
Sbjct: 6220915 CAGGGGGWMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 6221058
Score = 62.5 bits (130), Expect(2) = 3e-023
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYS 147
+P +P+ V A++W+ WATQ G+VK DWS APF +YR Y+
Sbjct: 6220738 FPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 6220866
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1 / -1
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
A W +++LD + W + YM YNYC D RFPQG PAECS
Sbjct: 6238697 AAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 6238557
Score = 57.0 bits (118), Expect(2) = 1e-024
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
G W +++L + + W ++ +M YNYC D RFPQG PAEC
Sbjct: 6216034 GAGGWWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 6216168
Score = 53.8 bits (111), Expect(2) = 5e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 6228050 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 6228187
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0028E05
Length = 157631
Score = 83.1 bits (175), Expect(2) = 1e-026
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDGR 180
+A+P +PM ++++LW+ WATQ G+VK DW+ APF+ SYRG+ ADACV GR
Sbjct: 81209 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAGGR 81042
Score = 79.9 bits (168), Expect(2) = 2e-025
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 58099 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 58248
Score = 74.4 bits (156), Expect(2) = 5e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 70160 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 70306
Score = 69.8 bits (146), Expect(2) = 2e-025
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / +1
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
C G WM R++D W T+ W R NYM Y+YC D RFP FPAEC
Sbjct: 63205 CAGGGGGWMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 63348
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1 / -1
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
A W +++LD + W + YM YNYC D RFPQG PAECS
Sbjct: 80987 AAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 80847
Score = 53.8 bits (111), Expect(2) = 5e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 70340 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 70477
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
insert sequence
Length = 1253
Score = 83.1 bits (175), Expect(2) = 1e-026
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDGR 180
+A+P +PM ++++LW+ WATQ G+VK DW+ APF+ SYRG+ ADACV GR
Sbjct: 623 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGFRADACVVAAGGR 790
Score = 60.6 bits (126), Expect(2) = 1e-026
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +1 / +2
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
A W +++LD + W + YM YNYC D RFPQG PAECS
Sbjct: 845 AAAGGWYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 985
>gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014850, whole
genome shotgun sequence
Length = 60324
Score = 79.9 bits (168), Expect(2) = 7e-026
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / -3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 46009 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 45860
Score = 74.4 bits (156), Expect(2) = 6e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 33948 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 33802
Score = 69.8 bits (146), Expect(2) = 7e-026
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / -3
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
C G WM R++D W T+ W R NYM Y+YC D RFP FPAEC
Sbjct: 40903 CAGGGGGWMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 40760
Score = 53.8 bits (111), Expect(2) = 6e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / -1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 33768 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 33631
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0622F03
Length = 170064
Score = 79.9 bits (168), Expect(2) = 2e-025
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 150890 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 151039
Score = 74.4 bits (156), Expect(2) = 5e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 162951 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 163097
Score = 69.8 bits (146), Expect(2) = 2e-025
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / +2
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
C G WM R++D W T+ W R NYM Y+YC D RFP FPAEC
Sbjct: 155996 CAGGGGGWMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 156139
Score = 53.8 bits (111), Expect(2) = 5e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 163131 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 163268
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 10128642 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 10128791
Score = 74.4 bits (156), Expect(2) = 5e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 10140703 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 10140849
Score = 69.8 bits (146), Expect(2) = 3e-023
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
C G WM R++D W T+ W R NYM Y+YC D RFP FPAEC
Sbjct: 10133748 CAGGGGGWMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 10133891
Score = 62.5 bits (130), Expect(2) = 3e-023
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1 / +3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYS 147
+P +P+ V A++W+ WATQ G+VK DWS APF +YR Y+
Sbjct: 10133571 FPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRYN 10133699
Score = 57.0 bits (118), Expect(2) = 1e-024
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / +3
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
G W +++L + + W ++ +M YNYC D RFPQG PAEC
Sbjct: 10128867 GAGGWWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 10129001
Score = 53.8 bits (111), Expect(2) = 5e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / +1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 10140883 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 10141020
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
insert sequence
Length = 1208
Score = 79.9 bits (168), Expect(2) = 2e-024
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 616 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 765
Score = 57.0 bits (118), Expect(2) = 2e-024
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
G W +++L + + W ++ +M YNYC D RFPQG PAEC
Sbjct: 841 GAGGWWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 975
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
insert sequence
Length = 1208
Score = 79.9 bits (168), Expect(2) = 2e-024
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+A+P +PM V+A+LW+ WATQ G+VK DWS APF S+R ++ADACV
Sbjct: 616 VAFPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDFNADACV 765
Score = 57.0 bits (118), Expect(2) = 2e-024
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / +1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
G W +++L + + W ++ +M YNYC D RFPQG PAEC
Sbjct: 841 GAGGWWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 975
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 76.7 bits (161), Expect(3) = 2e-024
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / -1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 8270757 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 8270632
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 8235279 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 8235142
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / -1
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 8235102 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 8234986
Score = 45.5 bits (93), Expect(3) = 2e-024
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1 / -1
Query: 64 GSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
G+ T+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 8270952 GTSGRTRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 8270839
Score = 31.8 bits (63), Expect(3) = 2e-024
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1 / -3
Query: 19 YPGGKPMSVHATLWDGSYWA 78
YP G+ + VHA+L +G++WA
Sbjct: 8270998 YPSGQAIRVHASL*NGNFWA 8270939
>gb|AACV01010438.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010438, whole
genome shotgun sequence
Length = 16114
Score = 76.7 bits (161), Expect(3) = 2e-024
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1 / +1
Query: 211 WMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
WM RQL A VAWAR NYM Y+YC D WRFPQG PAECS
Sbjct: 8560 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 8685
Score = 45.5 bits (93), Expect(3) = 2e-024
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1 / +1
Query: 64 GSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
G+ T+ G+VK++W+AAPF SYR Y+ AC G
Sbjct: 8365 GTSGRTRGGQVKINWTAAPFVASYRTYAYSACAVPAAG 8478
Score = 31.8 bits (63), Expect(3) = 2e-024
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1 / +3
Query: 19 YPGGKPMSVHATLWDGSYWA 78
YP G+ + VHA+L +G++WA
Sbjct: 8319 YPSGQAIRVHASL*NGNFWA 8378
>gb|AU184072.1|AU184072 AU184072 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0883, mRNA sequence
Length = 412
Score = 109 bits (233), Expect(2) = 2e-023
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +1 / +1
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R *F
Sbjct: 40 CPEGTSAWIXRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 198
Score = 24.9 bits (48), Expect(2) = 2e-023
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 542 IPCTFCRTFI 571
IPCTFC F+
Sbjct: 305 IPCTFCHPFV 334
>gb|CB651563.1|CB651563 OSJNEb16J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16J04 3', mRNA sequence
Length = 728
Score = 76.2 bits (160), Expect(2) = 4e-023
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +1 / -1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+ATLWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 524 VAFPRAQAMRVYATLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 378
Score = 56.1 bits (116), Expect(2) = 4e-023
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
G+ +QLD+A + +++YM YNYC D +RFPQGFP EC
Sbjct: 344 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGFPPEC 210
>gb|AU181176.1|AU181176 AU181176 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C10287, mRNA sequence
Length = 433
Score = 110 bits (234), Expect(2) = 4e-023
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +1
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 34 PAGGWSSSWCPXGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 213
Query: 343 *F 348
*F
Sbjct: 214 *F 219
Score = 23.1 bits (44), Expect(2) = 4e-023
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +3
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 327 PCTFCHPFV 353
>gb|AU173330.1|AU173330 AU173330 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2204, mRNA sequence
Length = 455
Score = 109 bits (233), Expect(2) = 6e-023
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = +1 / +3
Query: 163 PDGDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN 342
P G CP GT W+ R+LD AE GTVAWA +NYM YNYC DGWRFPQGFPAEC R
Sbjct: 9 PAGGWSSSWCPEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK 188
Query: 343 *F 348
*F
Sbjct: 189 *F 194
Score = 23.1 bits (44), Expect(2) = 6e-023
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2 / +2
Query: 545 PCTFCRTFI 571
PCTFC F+
Sbjct: 302 PCTFCHPFV 328
>gb|CF303459.1|CF303459 ABF1--02-F05.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-F05, mRNA sequence
Length = 497
Score = 111 bits (237), Expect = 9e-023
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACV 162
+Y DLAYP KPM +HATLWDGSYWAT+ G VK+DWS APF VSYRGYS +ACV
Sbjct: 309 KYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACV 470
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
complete sequence
Length = 166804
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 150057 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 149920
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / -2
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 149880 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 149764
>gb|AACV01010435.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010435, whole
genome shotgun sequence
Length = 5289
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 4850 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 4987
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 5027 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 5143
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
insert sequence
Length = 1109
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 610 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 747
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 787 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 903
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 822
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 520 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 657
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 697 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 813
>gb|AU075356.1|AU075356 AU075356 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11264_12Z, mRNA sequence
Length = 636
Score = 65.2 bits (136), Expect(2) = 4e-022
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSA 150
+AYP + M ++ +LW+ WATQ G+VK DWS APF YR ++A
Sbjct: 98 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNFTA 235
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +2
Query: 220 RQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+Q+DA + WAR NYM Y+YC D RFPQGFP ECS
Sbjct: 275 QQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 391
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
insert sequence
Length = 1101
Score = 74.4 bits (156), Expect(2) = 6e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / +2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 617 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 763
Score = 53.8 bits (111), Expect(2) = 6e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 797 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 934
>gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 3', mRNA sequence
Length = 705
Score = 74.4 bits (156), Expect(2) = 6e-022
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 485 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 339
Score = 53.8 bits (111), Expect(2) = 6e-022
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++YM YNYC D +RFPQG P EC+
Sbjct: 305 GSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPECT 168
>gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05J12 3', mRNA sequence
Length = 635
Score = 71.6 bits (150), Expect(2) = 3e-021
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1 / -3
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF YRG +A C
Sbjct: 510 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTALYRGLAASGC 364
Score = 54.2 bits (112), Expect(2) = 3e-021
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +1 / -3
Query: 181 PLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAEC 333
P G+ +QLD+A + +++YM YNYC D +RFPQG P EC
Sbjct: 348 PACANPGSPWMYQQQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPEC 196
>gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H13 3', mRNA sequence
Length = 709
Score = 74.4 bits (156), Expect(2) = 1e-020
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +1 / -2
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+A+P + M V+A+LWD WATQ G+V+ DWS APF SYRG +A C
Sbjct: 558 VAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYRGLAASGC 412
Score = 49.6 bits (102), Expect(2) = 1e-020
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1 / -2
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
G+ +QLD+A + +++ M YNYC D +RFPQG P EC+
Sbjct: 378 GSPWMYQQQLDSASQDRLRQVQRDSMIYNYCADTYRFPQGLPPECT 241
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,163,877,322
Number of Sequences: 438736
Number of extensions: 66662394
Number of successful extensions: 597315
Number of sequences better than 1.0e-020: 56
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 160643054937
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)