TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448753.2.1
(537 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA... 182 8e-050
dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA... 182 8e-050
gb|CF315919.1|CF315919 HD--05-A07.b1 OsHDAC1-overexpressing... 182 7e-048
gb|C27236.1|C27236 C27236 Rice callus cDNA Oryza sativa (ja... 117 1e-036
gb|D22825.1|D22825 RICC1480A Rice callus Oryza sativa (japo... 154 8e-036
dbj|AK072673.1| Oryza sativa (japonica cultivar-group) cDNA... 150 1e-034
gb|C97151.1|C97151 C97151 Rice callus Oryza sativa (japonic... 146 2e-033
dbj|AK065696.1| Oryza sativa (japonica cultivar-group) cDNA... 133 3e-032
ref|XM_479062.1| Oryza sativa (japonica cultivar-group), mRNA 133 3e-032
gb|AACV01024998.1| Oryza sativa (japonica cultivar-group) c... 59 6e-031
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 59 1e-029
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 59 1e-029
emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC O... 59 1e-029
emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC O... 59 1e-029
gb|CF314822.1|CF314822 HD--03-I03.b1 OsHDAC1-overexpressing... 119 2e-025
gb|CF314542.1|CF314542 HD--03-B18.b1 OsHDAC1-overexpressing... 119 3e-025
gb|CF319534.1|CF319534 HD--10-B04.g1 OsHDAC1-overexpressing... 119 3e-025
dbj|AK059446.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-025
dbj|AK121668.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-025
ref|NM_189944.1| Oryza sativa (japonica cultivar-group), p... 119 3e-025
emb|AJ002894.1|OSAJ2894 Oryza sativa mRNA for glycine rich ... 119 3e-025
gb|CF319533.1|CF319533 HD--10-B04.b1 OsHDAC1-overexpressing... 117 1e-024
gb|CV734361.1|CV734361 FLO--09-L01.g1 Rice flower lambda ph... 116 2e-024
gb|AU183342.1|AU183342 AU183342 Rice cDNA from immature lea... 116 2e-024
gb|AU183168.1|AU183168 AU183168 Rice immature leaf includin... 114 8e-024
gb|AU181736.1|AU181736 AU181736 Rice callus (2001) Oryza sa... 111 5e-023
gb|AU183167.1|AU183167 AU183167 Rice immature leaf includin... 110 1e-022
gb|CA756389.1|CA756389 BR030041000_PLATE_D10_76_089.ab1 OA ... 110 1e-022
gb|BQ529570.1|BQ529570 18B1207026.seq Rice Uni Zap Library ... 110 1e-022
gb|CD670647.1|CD670647 OsMR062 5MT resistant rice mutant cD... 110 1e-022
gb|CD671054.1|CD671054 OsMR475 5MT resistant rice mutant cD... 110 1e-022
gb|CV152479.1|CV152479 LS352-S.SEQ Cold stressed rice cDNA ... 110 1e-022
gb|AU173043.1|AU173043 AU173043 Rice cDNA from immature lea... 110 2e-022
gb|AU069687.1|AU069687 AU069687 Rice callus Oryza sativa (j... 109 3e-022
gb|AU097111.1|AU097111 AU097111 Rice shoot Oryza sativa (ja... 109 3e-022
gb|AU164776.1|AU164776 AU164776 Rice cDNA from immature lea... 109 3e-022
gb|AU181596.1|AU181596 AU181596 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU181597.1|AU181597 AU181597 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU181599.1|AU181599 AU181599 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU181813.1|AU181813 AU181813 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU182575.1|AU182575 AU182575 Rice panicle at flowering s... 109 3e-022
gb|AU182582.1|AU182582 AU182582 Rice panicle at ripening st... 109 3e-022
gb|AU182721.1|AU182721 AU182721 Rice panicle shorter than 3... 109 3e-022
gb|AU183186.1|AU183186 AU183186 Rice immature leaf includin... 109 3e-022
gb|AU183204.1|AU183204 AU183204 Rice immature leaf includin... 109 3e-022
gb|AU183339.1|AU183339 AU183339 Rice cDNA from immature lea... 109 3e-022
gb|AU183649.1|AU183649 AU183649 Rice panicle shorter than 3... 109 3e-022
gb|AU183917.1|AU183917 AU183917 Rice cDNA from immature lea... 109 3e-022
gb|AU197655.1|AU197655 AU197655 Rice mature leaf Oryza sati... 109 3e-022
gb|CA754368.1|CA754368 BR040015000_PLATE_D09_68_077.ab1 OA ... 109 3e-022
gb|CB642535.1|CB642535 OSJNEb02M07.f OSJNEb Oryza sativa (j... 109 3e-022
gb|CB644708.1|CB644708 OSJNEb06A18.f OSJNEb Oryza sativa (j... 109 3e-022
gb|CB644709.1|CB644709 OSJNEb06A18.r OSJNEb Oryza sativa (j... 109 3e-022
gb|CB646039.1|CB646039 OSJNEb08D02.f OSJNEb Oryza sativa (j... 109 3e-022
gb|CB649069.1|CB649069 OSJNEb12M21.f OSJNEb Oryza sativa (j... 109 3e-022
gb|CB651741.1|CB651741 OSJNEb16N08.r OSJNEb Oryza sativa (j... 109 3e-022
gb|CB660930.1|CB660930 OSJNEd03C14.f OSJNEd Oryza sativa (j... 109 3e-022
gb|CB663500.1|CB663500 OSJNEd08I21.f OSJNEd Oryza sativa (j... 109 3e-022
gb|CB669242.1|CB669242 OSJNEe01J13.f OSJNEe Oryza sativa (j... 109 3e-022
gb|CB680379.1|CB680379 OSJNEf04P09.r OSJNEf Oryza sativa (j... 109 3e-022
gb|CB685320.1|CB685320 OSJNEf15K04.f OSJNEf Oryza sativa (j... 109 3e-022
gb|CF338416.1|CF338416 RCL1--01-J24.g1 Regenerated callus l... 109 3e-022
gb|CD671039.1|CD671039 OsMR460 5MT resistant rice mutant cD... 109 3e-022
gb|CV721604.1|CV721604 YBH--04-L05.b1 Rice before heading y... 109 3e-022
gb|CV722566.1|CV722566 YTPSP--01-N14.b1 TPSP-overexpression... 109 3e-022
gb|CV722859.1|CV722859 root--01-M15.g1 Rice root lambda pha... 109 3e-022
gb|BP184530.1|BP184530 BP184530 pNS rice panicle cDNA, flow... 109 3e-022
dbj|AK059164.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-022
dbj|AK070016.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-022
dbj|AK111046.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-022
dbj|AK119238.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-022
gb|D38961.1|D38961 RICC2990A Rice callus Oryza sativa (japo... 109 3e-022
gb|AU069685.1|AU069685 AU069685 Rice callus Oryza sativa (j... 109 3e-022
gb|AU070297.1|AU070297 AU070297 Rice mature leaf Oryza sati... 109 3e-022
gb|AU163568.1|AU163568 AU163568 Rice panicle at flowering s... 109 3e-022
gb|AU172976.1|AU172976 AU172976 Rice immature leaf includin... 109 3e-022
gb|AU181728.1|AU181728 AU181728 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU181734.1|AU181734 AU181734 Rice callus (2001) Oryza sa... 109 3e-022
gb|AU181787.1|AU181787 AU181787 Rice callus (2001) Oryza sa... 109 3e-022
gb|CF325088.1|CF325088 JMT1--02-E17.g1 AtJMT-overexpressing... 109 3e-022
gb|CF339660.1|CF339660 RCL1--05-I23.g1 Regenerated callus l... 109 3e-022
gb|CF340490.1|CF340490 RCL1--08-D01.g1 Regenerated callus l... 109 3e-022
gb|CV728457.1|CV728457 COLD--01-H17.b1 Cold treated rice le... 109 3e-022
gb|D38854.1|D38854 RICC1680A Rice callus Oryza sativa (japo... 108 5e-022
gb|D15398.1|D15398 RICC0579A Rice callus Oryza sativa (japo... 108 5e-022
gb|AU070731.1|AU070731 AU070731 Rice cDNA from young root O... 108 5e-022
gb|AU082552.1|AU082552 AU082552 Rice cDNA from immature lea... 108 5e-022
gb|AU181602.1|AU181602 AU181602 Rice callus (2001) Oryza sa... 108 5e-022
gb|AU181796.1|AU181796 AU181796 Rice callus (2001) Oryza sa... 108 5e-022
gb|AU183157.1|AU183157 AU183157 Rice immature leaf includin... 108 5e-022
gb|AU183158.1|AU183158 AU183158 Rice immature leaf includin... 108 5e-022
gb|AU183161.1|AU183161 AU183161 Rice immature leaf includin... 108 5e-022
gb|AU183174.1|AU183174 AU183174 Rice immature leaf includin... 108 5e-022
gb|AU183196.1|AU183196 AU183196 Rice immature leaf includin... 108 5e-022
gb|AU183286.1|AU183286 AU183286 Rice cDNA from immature lea... 108 5e-022
gb|AU197584.1|AU197584 AU197584 Rice cDNA from immature lea... 108 5e-022
gb|AU222728.1|AU222728 AU222728 Rice shoot Oryza sativa (ja... 108 5e-022
gb|AU222879.1|AU222879 AU222879 Rice shoot Oryza sativa (ja... 108 5e-022
gb|AU223420.1|AU223420 AU223420 Rice shoot Oryza sativa (ja... 108 5e-022
gb|CB641928.1|CB641928 OSJNEb01N09.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB642812.1|CB642812 OSJNEb03D02.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB642813.1|CB642813 OSJNEb03D02.r OSJNEb Oryza sativa (j... 108 5e-022
gb|CB645232.1|CB645232 OSJNEb06M18.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB646955.1|CB646955 OSJNEb09K20.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB647758.1|CB647758 OSJNEb10N07.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB647759.1|CB647759 OSJNEb10N07.r OSJNEb Oryza sativa (j... 108 5e-022
gb|CB649589.1|CB649589 OSJNEb13J14.f OSJNEb Oryza sativa (j... 108 5e-022
gb|CB649590.1|CB649590 OSJNEb13J14.r OSJNEb Oryza sativa (j... 108 5e-022
gb|CB653215.1|CB653215 OSJNEc04A17.r OSJNEc Oryza sativa (j... 108 5e-022
gb|CB654007.1|CB654007 OSJNEc05J01.r OSJNEc Oryza sativa (j... 108 5e-022
gb|CB660325.1|CB660325 OSJNEd01P05.f OSJNEd Oryza sativa (j... 108 5e-022
gb|CB660326.1|CB660326 OSJNEd01P05.r OSJNEd Oryza sativa (j... 108 5e-022
gb|CB675890.1|CB675890 OSJNEe11N24.f OSJNEe Oryza sativa (j... 108 5e-022
gb|CB675891.1|CB675891 OSJNEe11N24.r OSJNEe Oryza sativa (j... 108 5e-022
gb|CB678914.1|CB678914 OSJNEf01M02.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB680046.1|CB680046 OSJNEf04E24.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB680047.1|CB680047 OSJNEf04E24.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB680165.1|CB680165 OSJNEf04I13.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB680828.1|CB680828 OSJNEf06D23.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683010.1|CB683010 OSJNEf10N23.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683011.1|CB683011 OSJNEf10N23.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683187.1|CB683187 OSJNEf11D22.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683198.1|CB683198 OSJNEf11E05.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683302.1|CB683302 OSJNEf11I03.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683461.1|CB683461 OSJNEf11N18.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683487.1|CB683487 OSJNEf11O23.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683595.1|CB683595 OSJNEf12C21.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683657.1|CB683657 OSJNEf12F06.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB683752.1|CB683752 OSJNEf12J04.f OSJNEf Oryza sativa (j... 108 5e-022
gb|CB684137.1|CB684137 OSJNEf13F22.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CB684306.1|CB684306 OSJNEf13K23.r OSJNEf Oryza sativa (j... 108 5e-022
gb|CF306964.1|CF306964 HDA1--05-F15.g1 OsHDAC1-overexpressi... 108 5e-022
gb|CF325399.1|CF325399 JMT1--03-C05.g1 AtJMT-overexpressing... 108 5e-022
gb|CF326410.1|CF326410 JMT1--05-P17.g1 AtJMT-overexpressing... 108 5e-022
gb|CV722908.1|CV722908 root--01-O23.g1 Rice root lambda pha... 108 5e-022
emb|AJ002893.1|OSAJ2893 Oryza sativa mRNA for glycine-rich ... 108 5e-022
gb|D24035.1|D24035 RICR0926A Rice root Oryza sativa (japoni... 108 7e-022
gb|CV722264.1|CV722264 YDARK--01-A12.b1 Etiolated rice leaf... 108 7e-022
gb|CV722284.1|CV722284 YDARK--01-B12.b1 Etiolated rice leaf... 108 7e-022
gb|AF010580.1|AF010580 Oryza sativa glycine-rich protein (O... 108 7e-022
gb|D39013.1|D39013 RICR0635A Rice root Oryza sativa (japoni... 107 9e-022
gb|D22643.1|D22643 RICC0714A Rice callus Oryza sativa (japo... 107 9e-022
gb|CF326016.1|CF326016 JMT1--04-N24.g1 AtJMT-overexpressing... 107 1e-021
gb|CF326462.1|CF326462 JMT1--06-C03.g1 AtJMT-overexpressing... 107 1e-021
gb|CO436017.1|CO436017 OsMR939 5MT resistant rice mutant cD... 107 1e-021
gb|D38893.1|D38893 RICC2104A Rice callus Oryza sativa (japo... 106 2e-021
gb|D41169.1|D41169 RICS3487A Rice shoot Oryza sativa (japon... 106 2e-021
gb|C19227.1|C19227 C19227 Rice panicle at ripening stage Or... 106 2e-021
gb|C93472.1|C93472 C93472 Rice callus Oryza sativa (japonic... 106 2e-021
gb|D22624.1|D22624 RICC0590A Rice callus Oryza sativa (japo... 106 2e-021
gb|AU062556.1|AU062556 AU062556 Rice callus Oryza sativa (j... 106 2e-021
gb|AU069170.1|AU069170 AU069170 Rice callus Oryza sativa (j... 106 2e-021
gb|CB680378.1|CB680378 OSJNEf04P09.f OSJNEf Oryza sativa (j... 106 2e-021
gb|CV722254.1|CV722254 YDARK--01-A05.b1 Etiolated rice leaf... 106 2e-021
gb|D39251.1|D39251 RICR3129A Rice root Oryza sativa (japoni... 106 2e-021
gb|CB651740.1|CB651740 OSJNEb16N08.f OSJNEb Oryza sativa (j... 106 2e-021
gb|CB653214.1|CB653214 OSJNEc04A17.f OSJNEc Oryza sativa (j... 106 2e-021
gb|AF010579.1|AF010579 Oryza sativa glycine-rich protein (O... 106 2e-021
gb|C19663.1|C19663 C19663 Rice panicle at ripening stage Or... 105 3e-021
gb|AU182799.1|AU182799 AU182799 Rice panicle shorter than 3... 105 3e-021
gb|CB684585.1|CB684585 OSJNEf14E05.r OSJNEf Oryza sativa (j... 105 3e-021
gb|C27754.1|C27754 C27754 Rice callus cDNA Oryza sativa (ja... 105 3e-021
gb|D38955.1|D38955 RICC2946A Rice callus Oryza sativa (japo... 105 4e-021
gb|AU097366.1|AU097366 AU097366 Rice shoot Oryza sativa (ja... 105 4e-021
gb|AU082580.2|AU082580 AU082580 Rice shoot Oryza sativa (ja... 105 4e-021
gb|CB663501.1|CB663501 OSJNEd08I21.r OSJNEd Oryza sativa (j... 105 4e-021
gb|CF326689.1|CF326689 JMT1--06-M04.g1 AtJMT-overexpressing... 105 4e-021
gb|D38800.1|D38800 RICC0593A Rice callus Oryza sativa (japo... 105 6e-021
gb|C98716.1|C98716 C98716 Rice panicle at flowering stage O... 105 6e-021
gb|AU064057.1|AU064057 AU064057 Rice panicle at flowering s... 105 6e-021
gb|D38799.1|D38799 RICC0553A Rice callus Oryza sativa (japo... 104 8e-021
gb|D38835.1|D38835 RICC1313A Rice callus Oryza sativa (japo... 104 8e-021
gb|AU062785.1|AU062785 AU062785 Rice callus Oryza sativa (j... 104 8e-021
gb|AU064424.1|AU064424 AU064424 Rice panicle shorter than 3... 104 8e-021
gb|CF326129.1|CF326129 JMT1--05-C22.g1 AtJMT-overexpressing... 104 8e-021
gb|CV728464.1|CV728464 COLD--01-I02.b1 Cold treated rice le... 104 8e-021
>dbj|AK064923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N14, full
insert sequence
Length = 1069
Score = 182 bits (393), Expect(2) = 8e-050
Identities = 77/100 (77%), Positives = 84/100 (84%)
Frame = +2 / +3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SS+ ++YQ+IRCMSSSKLFVGGLSYGTD+ SLRD FA YGQVIEAKII DRE+GRSRGFG
Sbjct: 99 SSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFG 278
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY ITA+DGK LDGRNIRVN ANERTGGFR
Sbjct: 279 FITYASSEEASAAITALDGKDLDGRNIRVNTANERTGGFR 398
Score = 121 bits (259), Expect(2) = 1e-029
Identities = 65/108 (60%), Positives = 70/108 (64%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKPPVLSLA LT M RPSR FP V+KPKPLDLP SRS +ILASIT
Sbjct: 400 LRKPPVLSLAVLTLMLRPSRSFPSKAVIAAEASSLDA*VMKPKPLDLPVSRSLMILASIT 221
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFELFELVAFL 76
P LA SLRL SSVP E PPTKS +DDMHLI * EL L++ L
Sbjct: 220 *P*LAKVSLRLCSSVPYERPPTKSFEDDMHLID**RAGLELVALLSRL 77
Score = 38.6 bits (78), Expect(2) = 8e-050
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 5 ALSSFPSVSQLGTMMLANKLGGLLKNATSS 94
A S + Q GTM LANK+G LLK ATSS
Sbjct: 15 AAFSIVNPRQFGTMALANKIGNLLKRATSS 104
Score = 32.2 bits (64), Expect(2) = 1e-029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 93 ELVAFLSKPPSLLASIIVPN*ETEGNEERAS 1
ELVA LS+ P LLA+ IVPN* E+ A+
Sbjct: 103 ELVALLSRLPILLANAIVPN*RGFTMEKAAA 11
>dbj|AK099309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146P18, full
insert sequence
Length = 1027
Score = 182 bits (393), Expect(2) = 8e-050
Identities = 77/100 (77%), Positives = 84/100 (84%)
Frame = +2 / +3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SS+ ++YQ+IRCMSSSKLFVGGLSYGTD+ SLRD FA YGQVIEAKII DRE+GRSRGFG
Sbjct: 90 SSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFG 269
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY ITA+DGK LDGRNIRVN ANERTGGFR
Sbjct: 270 FITYASSEEASAAITALDGKDLDGRNIRVNTANERTGGFR 389
Score = 121 bits (259), Expect(2) = 1e-029
Identities = 65/108 (60%), Positives = 70/108 (64%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKPPVLSLA LT M RPSR FP V+KPKPLDLP SRS +ILASIT
Sbjct: 391 LRKPPVLSLAVLTLMLRPSRSFPSKAVIAAEASSLDA*VMKPKPLDLPVSRSLMILASIT 212
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFELFELVAFL 76
P LA SLRL SSVP E PPTKS +DDMHLI * EL L++ L
Sbjct: 211 *P*LAKVSLRLCSSVPYERPPTKSFEDDMHLID**RAGLELVALLSRL 68
Score = 38.6 bits (78), Expect(2) = 8e-050
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 5 ALSSFPSVSQLGTMMLANKLGGLLKNATSS 94
A S + Q GTM LANK+G LLK ATSS
Sbjct: 6 AAFSIVNPRQFGTMALANKIGNLLKRATSS 95
Score = 32.2 bits (64), Expect(2) = 1e-029
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 93 ELVAFLSKPPSLLASIIVPN*ETEGNEERAS 1
ELVA LS+ P LLA+ IVPN* E+ A+
Sbjct: 94 ELVALLSRLPILLANAIVPN*RGFTMEKAAA 2
>gb|CF315919.1|CF315919 HD--05-A07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-A07, mRNA sequence
Length = 429
Score = 182 bits (393), Expect(2) = 7e-048
Identities = 77/100 (77%), Positives = 84/100 (84%)
Frame = +2 / +2
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SS+ ++YQ+IRCMSSSKLFVGGLSYGTD+ SLRD FA YGQVIEAKII DRE+GRSRGFG
Sbjct: 125 SSSPALYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFG 304
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY ITA+DGK LDGRNIRVN ANERTGGFR
Sbjct: 305 FITYASSEEASAAITALDGKDLDGRNIRVNTANERTGGFR 424
Score = 121 bits (259), Expect = 5e-026
Identities = 65/108 (60%), Positives = 70/108 (64%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKPPVLSLA LT M RPSR FP V+KPKPLDLP SRS +ILASIT
Sbjct: 426 LRKPPVLSLAVLTLMLRPSRSFPSKAVIAAEASSLDA*VMKPKPLDLPVSRSLMILASIT 247
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFELFELVAFL 76
P LA SLRL SSVP E PPTKS +DDMHLI * EL L++ L
Sbjct: 246 *P*LAKVSLRLCSSVPYERPPTKSFEDDMHLID**RAGLELVALLSRL 103
Score = 31.8 bits (63), Expect(2) = 7e-048
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 29 SQLGTMMLANKLGGLLKNATSS 94
S + M LANK+G LLK ATSS
Sbjct: 65 SSVWKMALANKIGNLLKRATSS 130
>gb|C27236.1|C27236 C27236 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51383_2A, mRNA sequence
Length = 378
Score = 117 bits (251), Expect(2) = 1e-036
Identities = 51/69 (73%), Positives = 53/69 (76%)
Frame = +2 / +2
Query: 191 LRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNH 370
LRD FA YGQVIEAKII DRE+GRSRGFGFITY ITA+DGK LDGRNIRVN
Sbjct: 116 LRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNT 295
Query: 371 ANERTGGFR 397
ANERT FR
Sbjct: 296 ANERTXCFR 322
Score = 58.8 bits (122), Expect(2) = 1e-036
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +2 / +3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDD 184
SS+ ++YQ+IRCMSSSKLFVGGLSYGTD+
Sbjct: 24 SSSPALYQSIRCMSSSKLFVGGLSYGTDE 110
>gb|D22825.1|D22825 RICC1480A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1480_1A, mRNA sequence
Length = 354
Score = 154 bits (331), Expect = 8e-036
Identities = 65/83 (78%), Positives = 68/83 (81%)
Frame = +2 / +2
Query: 149 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAM 328
LFVGGLSYGTD+ SLRD FA YGQVIEAKII DRE+GRSRGFGFITY ITA+
Sbjct: 2 LFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITAL 181
Query: 329 DGKTLDGRNIRVNHANERTGGFR 397
DGK LDGRNIRVN ANERTGGFR
Sbjct: 182 DGKDLDGRNIRVNTANERTGGFR 250
Score = 104 bits (222), Expect = 7e-021
Identities = 54/84 (64%), Positives = 56/84 (66%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKPPVLSLA LT M RPSR FP V+KPKPLDLP SRS +ILASIT
Sbjct: 252 LRKPPVLSLAVLTLMLRPSRSFPSKAVIAAEASSLDA*VMKPKPLDLPVSRSLMILASIT 73
Query: 219 CPYLANSSLRL*SSVP*ESPPTKS 148
P LA SLRL SSVP E PPTKS
Sbjct: 72 *P*LAKVSLRLCSSVPYERPPTKS 1
>dbj|AK072673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136G11, full
insert sequence
Length = 1654
Score = 150 bits (323), Expect = 1e-034
Identities = 58/97 (59%), Positives = 76/97 (78%)
Frame = +2 / +1
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++QA+RCMSSSKLF+GG+SYGTDD SL++ FA YG+VIEA++I+DR +GRSRG
Sbjct: 331 SAGSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRG 510
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
FGF+TYT IT MDGK L GR +RV++A++R
Sbjct: 511 FGFVTYTSTDEAAAAITGMDGKDLQGRIVRVSYAHDR 621
>gb|C97151.1|C97151 C97151 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52480_1A, mRNA sequence
Length = 460
Score = 146 bits (314), Expect = 2e-033
Identities = 56/93 (60%), Positives = 74/93 (79%)
Frame = +2 / +2
Query: 95 KSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGF 274
+SS ++QA+RCMSSSKLF+GG+SYGTDD SL++ FA YG+VIEA++I+DR +GRSRGF
Sbjct: 86 RSSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGF 265
Query: 275 GFITYTXXXXXXXXITAMDGKTLDGRNIRVNHA 373
GF+TYT IT MDGK L GR +RV+++
Sbjct: 266 GFVTYTSTDEAAAAITCMDGKDLQGRILRVSYS 364
>dbj|AK065696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035K23, full
insert sequence
Length = 1574
Score = 133 bits (284), Expect(2) = 3e-032
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGLSY TDD +L+D F+ YG V+EA+II+DR++G+S+G+GFITYT +
Sbjct: 238 SSKLFVGGLSYATDDATLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAV 417
Query: 320 TAMDGKTLDGRNIRVNHANERTGGFR 397
TAMDGK L GR +RV+ AN+R GG R
Sbjct: 418 TAMDGKDLQGRIVRVSTANDRAGGIR 495
Score = 29.5 bits (58), Expect(2) = 3e-032
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 89 SSKSSNMSVYQAIRCMSS 142
+S SSN S+ QA+RCMSS
Sbjct: 190 TSVSSNPSLLQAVRCMSS 243
>ref|XM_479062.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1575
Score = 133 bits (284), Expect(2) = 3e-032
Identities = 52/86 (60%), Positives = 67/86 (77%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGLSY TDD +L+D F+ YG V+EA+II+DR++G+S+G+GFITYT +
Sbjct: 239 SSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAV 418
Query: 320 TAMDGKTLDGRNIRVNHANERTGGFR 397
TAMDGK L GR +RV+ AN+R GG R
Sbjct: 419 TAMDGKDLQGRIVRVSTANDRAGGIR 496
Score = 29.5 bits (58), Expect(2) = 3e-032
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 89 SSKSSNMSVYQAIRCMSS 142
+S SSN S+ QA+RCMSS
Sbjct: 191 TSVSSNPSLLQAVRCMSS 244
>gb|AACV01024998.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024998, whole
genome shotgun sequence
Length = 42222
Score = 59.3 bits (123), Expect(5) = 6e-031
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / -3
Query: 230 AKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTL 343
AKII DRE+GRSRGFGFITY ITA+DGK +
Sbjct: 9388 AKIINDRETGRSRGFGFITYASSEEASAAITALDGKVI 9275
Score = 48.7 bits (100), Expect(5) = 6e-031
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 161 GLSYGTDDHSLRDEFAKYGQVIEAKIIL 244
GLSYGTD+ SLRD FA YGQVIE + L
Sbjct: 9536 GLSYGTDEQSLRDTFANYGQVIEGILSL 9453
Score = 45.1 bits (92), Expect(5) = 6e-031
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -2
Query: 341 LDGRNIRVNHANERTGGFR 397
LDGRNIRVN ANERTGGFR
Sbjct: 8678 LDGRNIRVNTANERTGGFR 8622
Score = 45.1 bits (92), Expect(5) = 6e-031
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2 / -2
Query: 98 SSNMSVYQAIRCMSSSKLFVGGL 166
SS+ ++YQ+IRCMSSSKLFVGGL
Sbjct: 9698 SSSPALYQSIRCMSSSKLFVGGL 9630
Score = 35.9 bits (72), Expect(5) = 6e-031
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / -2
Query: 38 GTMMLANKLGGLLKNATSS 94
GTM LANK+G LLK ATSS
Sbjct: 9749 GTMALANKIGNLLKRATSS 9693
>ref|NT_079837.2| Oryza sativa (japonica cultivar-group)
Length = 3671013
Score = 59.3 bits (123), Expect(4) = 1e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 230 AKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTL 343
AKII DRE+GRSRGFGFITY ITA+DGK +
Sbjct: 1482806 AKIINDRETGRSRGFGFITYASSEEASAAITALDGKVI 1482919
Score = 48.7 bits (100), Expect(4) = 1e-029
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / +1
Query: 161 GLSYGTDDHSLRDEFAKYGQVIEAKIIL 244
GLSYGTD+ SLRD FA YGQVIE + L
Sbjct: 1482658 GLSYGTDEQSLRDTFANYGQVIEGILSL 1482741
Score = 45.1 bits (92), Expect(4) = 1e-029
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 98 SSNMSVYQAIRCMSSSKLFVGGL 166
SS+ ++YQ+IRCMSSSKLFVGGL
Sbjct: 1482496 SSSPALYQSIRCMSSSKLFVGGL 1482564
Score = 35.9 bits (72), Expect(4) = 1e-029
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 38 GTMMLANKLGGLLKNATSS 94
GTM LANK+G LLK ATSS
Sbjct: 1482445 GTMALANKIGNLLKRATSS 1482501
>gb|CH401281.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000118
genomic scaffold, whole genome shotgun sequence
Length = 3660441
Score = 59.3 bits (123), Expect(4) = 1e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / +1
Query: 230 AKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTL 343
AKII DRE+GRSRGFGFITY ITA+DGK +
Sbjct: 268498 AKIINDRETGRSRGFGFITYASSEEASAAITALDGKVI 268611
Score = 48.7 bits (100), Expect(4) = 1e-029
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 161 GLSYGTDDHSLRDEFAKYGQVIEAKIIL 244
GLSYGTD+ SLRD FA YGQVIE + L
Sbjct: 268350 GLSYGTDEQSLRDTFANYGQVIEGILSL 268433
Score = 45.1 bits (92), Expect(4) = 1e-029
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2 / +3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGL 166
SS+ ++YQ+IRCMSSSKLFVGGL
Sbjct: 268188 SSSPALYQSIRCMSSSKLFVGGL 268256
Score = 35.9 bits (72), Expect(4) = 1e-029
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 38 GTMMLANKLGGLLKNATSS 94
GTM LANK+G LLK ATSS
Sbjct: 268137 GTMALANKIGNLLKRATSS 268193
>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 136155
Score = 59.3 bits (123), Expect(4) = 1e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 230 AKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTL 343
AKII DRE+GRSRGFGFITY ITA+DGK +
Sbjct: 6497 AKIINDRETGRSRGFGFITYASSEEASAAITALDGKVI 6610
Score = 48.7 bits (100), Expect(4) = 1e-029
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / +1
Query: 161 GLSYGTDDHSLRDEFAKYGQVIEAKIIL 244
GLSYGTD+ SLRD FA YGQVIE + L
Sbjct: 6349 GLSYGTDEQSLRDTFANYGQVIEGILSL 6432
Score = 45.1 bits (92), Expect(4) = 1e-029
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2 / +1
Query: 98 SSNMSVYQAIRCMSSSKLFVGGL 166
SS+ ++YQ+IRCMSSSKLFVGGL
Sbjct: 6187 SSSPALYQSIRCMSSSKLFVGGL 6255
Score = 35.9 bits (72), Expect(4) = 1e-029
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 38 GTMMLANKLGGLLKNATSS 94
GTM LANK+G LLK ATSS
Sbjct: 6136 GTMALANKIGNLLKRATSS 6192
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 127026
Score = 59.3 bits (123), Expect(4) = 1e-029
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2 / -1
Query: 230 AKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTL 343
AKII DRE+GRSRGFGFITY ITA+DGK +
Sbjct: 52812 AKIINDRETGRSRGFGFITYASSEEASAAITALDGKVI 52699
Score = 48.7 bits (100), Expect(4) = 1e-029
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +2 / -3
Query: 161 GLSYGTDDHSLRDEFAKYGQVIEAKIIL 244
GLSYGTD+ SLRD FA YGQVIE + L
Sbjct: 52960 GLSYGTDEQSLRDTFANYGQVIEGILSL 52877
Score = 45.1 bits (92), Expect(4) = 1e-029
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2 / -3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGL 166
SS+ ++YQ+IRCMSSSKLFVGGL
Sbjct: 53122 SSSPALYQSIRCMSSSKLFVGGL 53054
Score = 35.9 bits (72), Expect(4) = 1e-029
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 38 GTMMLANKLGGLLKNATSS 94
GTM LANK+G LLK ATSS
Sbjct: 53173 GTMALANKIGNLLKRATSS 53117
>gb|CF314822.1|CF314822 HD--03-I03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--03-I03, mRNA sequence
Length = 448
Score = 119 bits (255), Expect = 2e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +3
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 174 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFASGDDAKS 353
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 354 AMDAMDGKELEGRSIRVNFANERPPGNR 437
>gb|CF314542.1|CF314542 HD--03-B18.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--03-B18, mRNA sequence
Length = 448
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +1
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 175 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 354
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 355 AMDAMDGKELEGRSIRVNFANERPPGNR 438
>gb|CF319534.1|CF319534 HD--10-B04.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-B04, mRNA sequence
Length = 601
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / -3
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 587 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 408
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 407 AMDAMDGKELEGRSIRVNFANERPPGNR 324
>dbj|AK059446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A07, full
insert sequence
Length = 874
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +3
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 174 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 353
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 354 AMDAMDGKELEGRSIRVNFANERPPGNR 437
>dbj|AK121668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G16, full
insert sequence
Length = 809
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 194 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 373
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 374 AMDAMDGKELEGRSIRVNFANERPPGNR 457
>ref|NM_189944.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 453
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +1
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 100 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 279
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 280 AMDAMDGKELEGRSIRVNFANERPPGNR 363
>emb|AJ002894.1|OSAJ2894 Oryza sativa mRNA for glycine rich RNA-binding protein 2 (OsGRP2)
Length = 705
Score = 119 bits (254), Expect = 3e-025
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +2 / +1
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 148 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 327
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 328 AMDAMDGKELEGRSIRVNFANERPPGNR 411
>gb|CF319533.1|CF319533 HD--10-B04.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-B04, mRNA sequence
Length = 514
Score = 117 bits (250), Expect = 1e-024
Identities = 49/88 (55%), Positives = 63/88 (71%)
Frame = +2 / +3
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF++
Sbjct: 240 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSXANGDDAKS 419
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AMDGK L+GR+IRVN ANER G R
Sbjct: 420 AMDAMDGKELEGRSIRVNFANERPPGNR 503
>gb|CV734361.1|CV734361 FLO--09-L01.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-L01,
mRNA sequence
Length = 520
Score = 116 bits (249), Expect = 2e-024
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2 / +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ S+KLFVGGLS+ T+D SL++ F +G V EA++I DRESGRSRGFGF+++
Sbjct: 272 LMSTKLFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKS 451
Query: 314 XITAMDGKTLDGRNIRVNHANER 382
+ AMDGK L+GR+IRVN ANER
Sbjct: 452 AMDAMDGKELEGRSIRVNFANER 520
>gb|AU183342.1|AU183342 AU183342 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61988, mRNA sequence
Length = 381
Score = 116 bits (248), Expect = 2e-024
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +2 / +2
Query: 128 RCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXX 307
R MSS++ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++
Sbjct: 83 RRMSSTRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSM 262
Query: 308 XXXITAMDGKTLDGRNIRVNHANERTGG 391
I M+GK LDGRNI VN A R G
Sbjct: 263 RDAIEGMNGKELDGRNITVNEAQSRRSG 346
>gb|AU183168.1|AU183168 AU183168 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50381, mRNA sequence
Length = 398
Score = 114 bits (244), Expect = 8e-024
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2 / +3
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MSS+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++
Sbjct: 93 MSSTSCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRD 272
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I M+GK LDGRNI VN A R G
Sbjct: 273 AIEGMNGKELDGRNITVNEAQSRRSG 350
>gb|AU181736.1|AU181736 AU181736 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C51858, mRNA sequence
Length = 416
Score = 111 bits (238), Expect = 5e-023
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +2 / -2
Query: 128 RCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXX 307
R M S+ FVGGL++ TDD SL F+ +G+++E+KII DRE+GRSRGFGF+T++
Sbjct: 373 RRMLSTSCFVGGLAWATDDRSLXAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAM 194
Query: 308 XXXITAMDGKTLDGRNIRVNHANERTGG 391
I M+GK LDGRNI VN A R G
Sbjct: 193 RDAIEGMNGKELDGRNITVNEAQSRRSG 110
>gb|AU183167.1|AU183167 AU183167 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50363, mRNA sequence
Length = 447
Score = 110 bits (235), Expect = 1e-022
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 111 STSCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAI 290
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 291 EGMNGKELDGRNITVNEAQSRRSG 362
>gb|CA756389.1|CA756389 BR030041000_PLATE_D10_76_089.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030041000_PLATE_D10_76_089.ab1 similar to glycine-rich
protein [Oryza sativa], mRNA sequence
Length = 619
Score = 110 bits (235), Expect = 1e-022
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 119 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 298
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 299 MNGKELDGRNITVNEAQSRRSG 364
>gb|BQ529570.1|BQ529570 18B1207026.seq Rice Uni Zap Library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 545
Score = 110 bits (235), Expect = 1e-022
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 128 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 307
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 308 MNGKELDGRNITVNEAQSRRSG 373
>gb|CD670647.1|CD670647 OsMR062 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 699
Score = 110 bits (235), Expect = 1e-022
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 172 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 351
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 352 MNGKELDGRNITVNEAQSRRSG 417
>gb|CD671054.1|CD671054 OsMR475 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 707
Score = 110 bits (235), Expect = 1e-022
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 161 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 340
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 341 MNGKELDGRNITVNEAQSRRSG 406
>gb|CV152479.1|CV152479 LS352-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 665
Score = 110 bits (235), Expect = 1e-022
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 122 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 301
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 302 MNGKELDGRNITVNEAQSRRSG 367
>gb|AU173043.1|AU173043 AU173043 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61350, mRNA sequence
Length = 444
Score = 110 bits (234), Expect = 2e-022
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 99 STACFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAI 278
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 279 EGMNGKELDGRNITVNEAQSRRSG 350
>gb|AU069687.1|AU069687 AU069687 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1959_3A, mRNA sequence
Length = 675
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 104 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 283
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 284 MNGKELDGRNITVNEAQSRRSG 349
>gb|AU097111.1|AU097111 AU097111 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S2243, mRNA sequence
Length = 492
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 100 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 279
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 280 MNGKELDGRNITVNEAQSRRSG 345
>gb|AU164776.1|AU164776 AU164776 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61236, mRNA sequence
Length = 453
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 44 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 223
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 224 MNGKELDGRNITVNEAQSRRSG 289
>gb|AU181596.1|AU181596 AU181596 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50727, mRNA sequence
Length = 446
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 97 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 276
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 277 MNGKELDGRNITVNEAQSRRSG 342
>gb|AU181597.1|AU181597 AU181597 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50728, mRNA sequence
Length = 450
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 68 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 247
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 248 MNGKELDGRNITVNEAQSRRSG 313
>gb|AU181599.1|AU181599 AU181599 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50729, mRNA sequence
Length = 445
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 68 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 247
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 248 MNGKELDGRNITVNEAQSRRSG 313
>gb|AU181813.1|AU181813 AU181813 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C53381, mRNA sequence
Length = 451
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 77 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 256
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 257 MNGKELDGRNITVNEAQSRRSG 322
>gb|AU182575.1|AU182575 AU182575 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4478, mRNA sequence
Length = 447
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 107 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 286
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 287 MNGKELDGRNITVNEAQSRRSG 352
>gb|AU182582.1|AU182582 AU182582 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10276, mRNA sequence
Length = 444
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 94 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 273
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 274 MNGKELDGRNITVNEAQSRRSG 339
>gb|AU182721.1|AU182721 AU182721 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30011, mRNA sequence
Length = 451
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 31 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 210
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 211 MNGKELDGRNITVNEAQSRRSG 276
>gb|AU183186.1|AU183186 AU183186 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50586, mRNA sequence
Length = 448
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +3
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 102 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 281
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 282 MNGKELDGRNITVNEAQSRRSG 347
>gb|AU183204.1|AU183204 AU183204 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50936, mRNA sequence
Length = 445
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 104 RCFVGGLAWATDDRSLXXAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 283
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 284 MNGKELDGRNITVNEAQSRRSG 349
>gb|AU183339.1|AU183339 AU183339 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61876, mRNA sequence
Length = 447
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 35 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 214
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 215 MNGKELDGRNITVNEAQSRRSG 280
>gb|AU183649.1|AU183649 AU183649 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30367, mRNA sequence
Length = 462
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 113 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 292
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 293 MNGKELDGRNITVNEAQSRRSG 358
>gb|AU183917.1|AU183917 AU183917 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61025, mRNA sequence
Length = 447
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 100 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 279
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 280 MNGKELDGRNITVNEAQSRRSG 345
>gb|AU197655.1|AU197655 AU197655 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S20306, mRNA sequence
Length = 450
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 103 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 282
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 283 MNGKELDGRNITVNEAQSRRSG 348
>gb|CA754368.1|CA754368 BR040015000_PLATE_D09_68_077.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR040015000_PLATE_D09_68_077.ab1 similar to glycine rich
RNA binding protein [Oryza sativa], mRNA sequence
Length = 847
Score = 109 bits (232), Expect = 3e-022
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2 / +1
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 112 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 291
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 292 MNGKELDGRNITVNEAQSRRSG 357
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,321,753,257
Number of Sequences: 438736
Number of extensions: 28654491
Number of successful extensions: 94401
Number of sequences better than 1.0e-020: 249
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 108963194040
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)