TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448569.2.1
(758 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXR... 140 1e-053
dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA... 140 1e-053
ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-... 140 1e-053
dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA... 140 1e-053
ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 140 1e-053
gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing ... 127 5e-050
dbj|AP004705.3| Oryza sativa (japonica cultivar-group) geno... 114 2e-049
gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) c... 110 3e-048
gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (j... 104 4e-042
gb|D40451.1|D40451 RICS2440A Rice shoot Oryza sativa (japon... 127 5e-038
dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA... 76 3e-034
ref|XM_473793.1| Oryza sativa (japonica cultivar-group), p... 76 3e-034
gb|C72373.1|C72373 C72373 Rice panicle at flowering stage O... 140 1e-031
gb|CF303459.1|CF303459 ABF1--02-F05.g1 ABF3-overexpressing ... 140 2e-031
dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA... 66 5e-030
dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA... 66 5e-030
gb|AU031503.1|AU031503 AU031503 Rice cDNA from immature lea... 114 2e-029
dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-028
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 76 5e-027
emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromoso... 76 6e-027
dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA... 61 4e-026
gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (j... 61 4e-026
gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (j... 60 3e-025
dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA... 65 1e-024
ref|XM_473788.1| Oryza sativa (japonica cultivar-group), p... 65 1e-024
gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (j... 61 1e-024
gb|D41124.1|D41124 RICS3412A Rice shoot Oryza sativa (japon... 69 2e-024
dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA... 65 3e-024
ref|XM_473787.1| Oryza sativa (japonica cultivar-group), p... 65 3e-024
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 114 1e-023
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 114 1e-023
ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-022
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 66 1e-022
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 66 1e-022
dbj|AP003771.2| Oryza sativa (japonica cultivar-group) geno... 66 1e-022
dbj|AP005445.3| Oryza sativa (japonica cultivar-group) geno... 66 1e-022
gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) c... 66 1e-022
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 110 2e-022
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 110 2e-022
ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-021
gb|AU032208.1|AU032208 AU032208 Rice root Oryza sativa (jap... 66 6e-021
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
endotransglycosylase-related protein 5, complete cds
Length = 1280
Score = 140 bits (300), Expect(2) = 1e-053
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 484 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 663
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 664 WSGAPFVVSYRGY 702
Score = 94.5 bits (200), Expect(2) = 1e-053
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 778 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 915
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3 / -1
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 695 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 516
Query: 705 LVGFQMMV*V 734
GFQM++*V
Sbjct: 515 FWGFQMIL*V 486
Score = 58.3 bits (121), Expect(2) = 8e-024
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -3
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 912 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 784
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full
insert sequence
Length = 1127
Score = 140 bits (300), Expect(2) = 1e-053
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 488 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 667
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 668 WSGAPFVVSYRGY 706
Score = 94.5 bits (200), Expect(2) = 1e-053
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 782 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 919
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3 / -3
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 699 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 520
Query: 705 LVGFQMMV*V 734
GFQM++*V
Sbjct: 519 FWGFQMIL*V 490
Score = 58.3 bits (121), Expect(2) = 8e-024
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 916 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 788
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA
Length = 1127
Score = 140 bits (300), Expect(2) = 1e-053
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 488 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 667
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 668 WSGAPFVVSYRGY 706
Score = 94.5 bits (200), Expect(2) = 1e-053
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 782 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 919
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3 / -3
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 699 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 520
Query: 705 LVGFQMMV*V 734
GFQM++*V
Sbjct: 519 FWGFQMIL*V 490
Score = 58.3 bits (121), Expect(2) = 8e-024
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 916 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 788
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full
insert sequence
Length = 1111
Score = 140 bits (300), Expect(2) = 1e-053
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 493 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 672
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 673 WSGAPFVVSYRGY 711
Score = 94.5 bits (200), Expect(2) = 1e-053
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 787 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 924
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3 / -3
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 704 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 525
Query: 705 LVGFQMMV*V 734
GFQM++*V
Sbjct: 524 FWGFQMIL*V 495
Score = 58.3 bits (121), Expect(2) = 8e-024
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 921 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 793
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1111
Score = 140 bits (300), Expect(2) = 1e-053
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 493 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 672
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 673 WSGAPFVVSYRGY 711
Score = 94.5 bits (200), Expect(2) = 1e-053
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 787 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 924
Score = 76.2 bits (160), Expect(2) = 8e-024
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3 / -3
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 704 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 525
Query: 705 LVGFQMMV*V 734
GFQM++*V
Sbjct: 524 FWGFQMIL*V 495
Score = 58.3 bits (121), Expect(2) = 8e-024
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -2
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 921 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 793
>gb|CF304275.1|CF304275 ABF1--04-I16.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-I16, mRNA sequence
Length = 588
Score = 127 bits (273), Expect(2) = 5e-050
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = -2 / +1
Query: 718 WNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPF 539
WNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APF
Sbjct: 10 WNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPF 189
Query: 538 VVSYRSY 518
VVSYR Y
Sbjct: 190 VVSYRGY 210
Score = 94.5 bits (200), Expect(2) = 5e-050
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 286 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 423
Score = 70.7 bits (148), Expect(2) = 3e-022
Identities = 37/65 (56%), Positives = 42/65 (64%)
Frame = +3 / -2
Query: 525 R*ETTKGASDQSMPTLPFSVAQ*LPSHSVACSVMGLELGYGRSA*RLKERMKRSSTLNRM 704
R +TT GA QS+ T P VAQ*LPSHSVACS++GL GY RS+ L SST N M
Sbjct: 203 RYDTTNGAPLQSILTSPCLVAQ*LPSHSVACSLIGLLCGYARSSYFLNVLTGTSSTWNMM 24
Query: 705 LVGFQ 719
GFQ
Sbjct: 23 FWGFQ 9
Score = 58.3 bits (121), Expect(2) = 3e-022
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2 / -1
Query: 329 SVAGALGGESLREPPPILAVVVAHEVALRPPDGAPLGAVKLPV 457
S+A ALGGE+L E P + AVVV H VAL P DGA LGAV+L V
Sbjct: 420 SLAVALGGEALGEAPAVGAVVVGHVVALGPRDGAELGAVELAV 292
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0682A06
Length = 142023
Score = 114 bits (243), Expect(3) = 2e-049
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2 / +1
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 62407 FQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 62586
Score = 94.5 bits (200), Expect(3) = 2e-049
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 62662 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 62799
Score = 30.4 bits (60), Expect(3) = 2e-049
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILF 695
HTY IIWNP +I++
Sbjct: 62270 HTYKIIWNPQNIMY 62311
>gb|AACV01002670.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002670, whole
genome shotgun sequence
Length = 40539
Score = 110 bits (234), Expect(3) = 3e-048
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2 / +2
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM L ATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 6014 FQVDDVPVRTFKKYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 6193
Score = 94.5 bits (200), Expect(3) = 3e-048
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAERN+M YNYC DGWRFPQG PAEC R *+
Sbjct: 6269 WIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK*F 6406
Score = 30.4 bits (60), Expect(3) = 3e-048
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILF 695
HTY IIWNP +I++
Sbjct: 5877 HTYKIIWNPQNIMY 5918
>gb|CB658473.1|CB658473 OSJNEc14I12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14I12 3', mRNA sequence
Length = 595
Score = 104 bits (221), Expect(2) = 4e-042
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = -2 / -3
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+ L YP S+PM LH TLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 587 FQVDDVPVRTFKK*DGLAYPQSKPMRLHVTLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 408
Score = 91.8 bits (194), Expect(2) = 4e-042
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECARH*Y 326
W++R+LD AE GTV WAER +M YNYC DGWRFPQG PAEC R *+
Sbjct: 332 WIHRELDGAELGTVAWAERKYMSYNYCADGWRFPQGFPAECYRK*F 195
>gb|D40451.1|D40451 RICS2440A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 392
Score = 127 bits (273), Expect(2) = 5e-038
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = -2 / +2
Query: 718 WNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPF 539
WNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APF
Sbjct: 2 WNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPF 181
Query: 538 VVSYRSY 518
VVSYR Y
Sbjct: 182 VVSYRGY 202
Score = 54.2 bits (112), Expect(2) = 5e-038
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLP 350
W++R+LD AE GTV WAERN+M YNY + G P
Sbjct: 278 WIHRELDGAELGTVAWAERNYMSYNYLRRRLAVSPGFP 391
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full
insert sequence
Length = 1234
Score = 75.8 bits (159), Expect(3) = 3e-034
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = -2 / +3
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
A +PYPS + M +HA+LW+G +WAT G+V I+W+ APFV SYR+Y
Sbjct: 627 AGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTY 764
Score = 69.3 bits (145), Expect(3) = 3e-034
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
WM+RQL + V WA N+M Y+YC D WRFPQGLPAEC+
Sbjct: 879 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 1004
Score = 42.3 bits (86), Expect(3) = 3e-034
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRY 656
H YTI+WNP +I+F VD +R FK +
Sbjct: 540 HNYTILWNPLNIIFSVDGKAVRVFKNH 620
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 966
Score = 75.8 bits (159), Expect(3) = 3e-034
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = -2 / +1
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
A +PYPS + M +HA+LW+G +WAT G+V I+W+ APFV SYR+Y
Sbjct: 559 AGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTY 696
Score = 69.3 bits (145), Expect(3) = 3e-034
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
WM+RQL + V WA N+M Y+YC D WRFPQGLPAEC+
Sbjct: 811 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 936
Score = 42.3 bits (86), Expect(3) = 3e-034
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRY 656
H YTI+WNP +I+F VD +R FK +
Sbjct: 472 HNYTILWNPLNIIFSVDGKAVRVFKNH 552
>gb|C72373.1|C72373 C72373 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1510_1A, mRNA sequence
Length = 244
Score = 140 bits (301), Expect = 1e-031
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 3 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVXID 182
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 183 WSGAPFVVSYRGY 221
>gb|CF303459.1|CF303459 ABF1--02-F05.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--02-F05, mRNA sequence
Length = 497
Score = 140 bits (300), Expect = 2e-031
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = -2 / +3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGID 557
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V ID
Sbjct: 234 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKID 413
Query: 556 WSDAPFVVSYRSY 518
WS APFVVSYR Y
Sbjct: 414 WSGAPFVVSYRGY 452
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
insert sequence
Length = 1208
Score = 65.7 bits (137), Expect(3) = 5e-030
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 975
Score = 64.8 bits (135), Expect(3) = 5e-030
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 622 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 747
Score = 42.8 bits (87), Expect(3) = 5e-030
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRY 656
HTY+IIWNP ++F VD IR FK +
Sbjct: 523 HTYSIIWNPQHVIFAVDGTPIRDFKNH 603
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
insert sequence
Length = 1208
Score = 65.7 bits (137), Expect(3) = 5e-030
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 853 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 975
Score = 64.8 bits (135), Expect(3) = 5e-030
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 622 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 747
Score = 42.8 bits (87), Expect(3) = 5e-030
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRY 656
HTY+IIWNP ++F VD IR FK +
Sbjct: 523 HTYSIIWNPQHVIFAVDGTPIRDFKNH 603
>gb|AU031503.1|AU031503 AU031503 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61752_1A, mRNA sequence
Length = 627
Score = 114 bits (243), Expect(2) = 2e-029
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2 / +1
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 25 FQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 204
Score = 39.1 bits (79), Expect(2) = 2e-029
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2 / +2
Query: 445 DSAEWGTVRWAERNFMRYNYCQDGWRFPQG 356
D AE R +M YNYC DGW P G
Sbjct: 299 DGAESAPSRGPSATYMSYNYCADGWALPPG 388
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
insert sequence
Length = 1253
Score = 62.5 bits (130), Expect(3) = 1e-028
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W N++LD +RW + +M YNYC D RFPQG+PAEC+
Sbjct: 860 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 985
Score = 61.6 bits (128), Expect(3) = 1e-028
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+ +P ++PM L+++LW+ WAT+ GRV DW+ APF SYR +
Sbjct: 623 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGF 754
Score = 44.6 bits (91), Expect(3) = 1e-028
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+I+WNP I+F VDD+ IR F+
Sbjct: 530 HTYSILWNPKHIIFMVDDMPIRDFR 604
>ref|NT_079866.2| Oryza sativa (japonica cultivar-group)
Length = 1075015
Score = 75.8 bits (159), Expect(2) = 5e-027
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = -2 / -2
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
A +PYPS + M +HA+LW+G +WAT G+V I+W+ APFV SYR+Y
Sbjct: 451479 AGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTY 451342
Score = 69.3 bits (145), Expect(2) = 5e-027
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2 / -2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
WM+RQL + V WA N+M Y+YC D WRFPQGLPAEC+
Sbjct: 451227 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 451102
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08,
complete sequence
Length = 129037
Score = 75.8 bits (159), Expect(2) = 6e-027
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = -2 / -3
Query: 655 ADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
A +PYPS + M +HA+LW+G +WAT G+V I+W+ APFV SYR+Y
Sbjct: 30680 AGVPYPSGQAMRVHASLWNGDFWATRGGQVKINWTAAPFVASYRTY 30543
Score = 69.3 bits (145), Expect(2) = 6e-027
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
WM+RQL + V WA N+M Y+YC D WRFPQGLPAEC+
Sbjct: 30428 WMDRQLGADGERDVAWARANYMIYDYCGDQWRFPQGLPAECS 30303
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
insert sequence
Length = 1101
Score = 60.6 bits (126), Expect(3) = 4e-026
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2 / +2
Query: 673 RSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
R+ + + +P ++ M ++A+LWD WAT+ GRV DWS APF SYR
Sbjct: 593 RNTEATTGVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYR 742
Score = 59.7 bits (124), Expect(3) = 4e-026
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2 / +2
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+QLDSA +R +R++M YNYC D +RFPQGLP EC
Sbjct: 818 QQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPEC 931
Score = 39.6 bits (80), Expect(3) = 4e-026
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+++WNP+ ILF VD IR ++
Sbjct: 521 HTYSVLWNPSHILFYVDGTPIREYR 595
>gb|CB650793.1|CB650793 OSJNEb15H04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H04 3', mRNA sequence
Length = 705
Score = 60.6 bits (126), Expect(3) = 4e-026
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2 / -2
Query: 673 RSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
R+ + + +P ++ M ++A+LWD WAT+ GRV DWS APF SYR
Sbjct: 509 RNTEATTGVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYR 360
Score = 59.7 bits (124), Expect(3) = 4e-026
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+QLDSA +R +R++M YNYC D +RFPQGLP EC
Sbjct: 284 QQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPEC 171
Score = 39.6 bits (80), Expect(3) = 4e-026
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+++WNP+ ILF VD IR ++
Sbjct: 581 HTYSVLWNPSHILFYVDGTPIREYR 507
>gb|CB644397.1|CB644397 OSJNEb05J12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05J12 3', mRNA sequence
Length = 635
Score = 59.7 bits (124), Expect(3) = 3e-025
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+QLDSA +R +R++M YNYC D +RFPQGLP EC
Sbjct: 309 QQLDSASQDRLRQVQRDYMIYNYCADTYRFPQGLPPEC 196
Score = 57.9 bits (120), Expect(3) = 3e-025
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = -2 / -3
Query: 673 RSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
R+ + + +P ++ M ++A+LWD WAT+ GRV DWS APF YR
Sbjct: 534 RNTEATTGVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTALYR 385
Score = 39.6 bits (80), Expect(3) = 3e-025
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+++WNP+ ILF VD IR ++
Sbjct: 606 HTYSVLWNPSHILFYVDGTPIREYR 532
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
insert sequence
Length = 1109
Score = 64.8 bits (135), Expect(3) = 1e-024
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+ YPSS+ M L+ +LW+ WAT+ GRV DWS APFV YR++
Sbjct: 610 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNF 741
Score = 55.1 bits (114), Expect(3) = 1e-024
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -2 / +1
Query: 457 NRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
++Q+D+ ++WA N+M Y+YC D RFPQG P EC+
Sbjct: 784 DQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 903
Score = 35.4 bits (71), Expect(3) = 1e-024
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYAD 650
HTY+I+W IL VD IR K +AD
Sbjct: 517 HTYSIVWTSQHILVLVDGTPIREMKNHAD 603
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 822
Score = 64.8 bits (135), Expect(3) = 1e-024
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+ YPSS+ M L+ +LW+ WAT+ GRV DWS APFV YR++
Sbjct: 520 IAYPSSQRMRLYGSLWNADDWATQGGRVKTDWSQAPFVARYRNF 651
Score = 55.1 bits (114), Expect(3) = 1e-024
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -2 / +1
Query: 457 NRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
++Q+D+ ++WA N+M Y+YC D RFPQG P EC+
Sbjct: 694 DQQMDATAQQAMKWARDNYMVYDYCADSKRFPQGFPPECS 813
Score = 35.4 bits (71), Expect(3) = 1e-024
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYAD 650
HTY+I+W IL VD IR K +AD
Sbjct: 427 HTYSIVWTSQHILVLVDGTPIREMKNHAD 513
>gb|CB648190.1|CB648190 OSJNEb11H13.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11H13 3', mRNA sequence
Length = 709
Score = 60.6 bits (126), Expect(3) = 1e-024
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2 / -2
Query: 673 RSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYR 524
R+ + + +P ++ M ++A+LWD WAT+ GRV DWS APF SYR
Sbjct: 582 RNTEATTGVAFPRAQAMRVYASLWDAEEWATQGGRVRTDWSRAPFTASYR 433
Score = 57.4 bits (119), Expect(3) = 1e-024
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 454 RQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+QLDSA +R +R+ M YNYC D +RFPQGLP EC
Sbjct: 357 QQLDSASQDRLRQVQRDSMIYNYCADTYRFPQGLPPEC 244
Score = 36.8 bits (74), Expect(3) = 1e-024
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTY+++WNP+ IL VD IR ++
Sbjct: 654 HTYSVLWNPSHILLYVDGTPIREYR 580
>gb|D41124.1|D41124 RICS3412A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 371
Score = 69.3 bits (145), Expect(2) = 2e-024
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = -2 / +2
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYPSSRPM 623
HTY IIWNP +I+F+VDD+ +R+FK+Y DL YP S+PM
Sbjct: 50 HTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPM 163
Score = 67.0 bits (140), Expect(2) = 2e-024
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 640 PSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
P+ + +HAT+WDGSYWAT V IDWS A FVVSYR Y
Sbjct: 145 PAEQADEVHATMWDGSYWATRHDDVKIDWSGATFVVSYRGY 267
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
insert sequence
Length = 1041
Score = 65.2 bits (136), Expect(3) = 3e-024
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P +PM L LWD WATE GR+ DWS APFV +R+Y
Sbjct: 607 VPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNY 738
Score = 46.4 bits (95), Expect(3) = 3e-024
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY++IWNP IL VD++ IR FK + D P
Sbjct: 514 HTYSVIWNPDEILILVDNMPIRQFKNHLDSGVP 612
Score = 41.8 bits (85), Expect(3) = 3e-024
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 424 VRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+R A+ +M YNYC D RFP G P EC
Sbjct: 850 LREAQDKYMIYNYCNDPERFPDGYPKEC 933
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 882
Score = 65.2 bits (136), Expect(3) = 3e-024
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P +PM L LWD WATE GR+ DWS APFV +R+Y
Sbjct: 544 VPFPIYQPMRLFGCLWDADDWATEGGRIKTDWSQAPFVAYFRNY 675
Score = 46.4 bits (95), Expect(3) = 3e-024
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFKRYADLPYP 638
HTY++IWNP IL VD++ IR FK + D P
Sbjct: 451 HTYSVIWNPDEILILVDNMPIRQFKNHLDSGVP 549
Score = 41.8 bits (85), Expect(3) = 3e-024
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / +1
Query: 424 VRWAERNFMRYNYCQDGWRFPQGLPAEC 341
+R A+ +M YNYC D RFP G P EC
Sbjct: 787 LREAQDKYMIYNYCNDPERFPDGYPKEC 870
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 114 bits (243), Expect = 1e-023
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2 / +3
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 8089824 FQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 8090003
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 114 bits (243), Expect = 1e-023
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2 / +1
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM LHATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 8322298 FQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 8322477
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 873
Score = 68.4 bits (143), Expect(3) = 1e-022
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -2 / +1
Query: 652 DLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
D+P+P +PM L+A++WD WAT+ GR+ DWS APF +R+Y
Sbjct: 538 DIPFPLYQPMRLYASIWDADDWATQGGRIKTDWSQAPFTAFFRNY 672
Score = 40.9 bits (83), Expect(3) = 1e-022
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W + LD ++ + N+ Y+YC D R+P G P EC
Sbjct: 739 WFTQDLDEEGKQKLKDVDDNYKIYDYCTDSRRYPNGYPPEC 861
Score = 39.1 bits (79), Expect(3) = 1e-022
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTYTIIWNP IL VD IR K
Sbjct: 448 HTYTIIWNPQMILILVDGTPIRQMK 522
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 10128879 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 10129001
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +3
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 10128648 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 10128773
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / +3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P+ +P+ + A++W+ WAT+ GRV DWS APFV +YR Y
Sbjct: 10133565 VPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 10133696
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / +3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
WM R++D W T+ W N+M Y+YC D RFP PAEC
Sbjct: 10133769 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 10133891
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 6216046 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 6216168
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 6215815 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 6215940
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P+ +P+ + A++W+ WAT+ GRV DWS APFV +YR Y
Sbjct: 6220732 VPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 6220863
Score = 62.5 bits (130), Expect(2) = 9e-021
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W N++LD +RW + +M YNYC D RFPQG+PAEC+
Sbjct: 6238682 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 6238557
Score = 61.6 bits (128), Expect(2) = 9e-021
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+ +P ++PM L+++LW+ WAT+ GRV DW+ APF SYR +
Sbjct: 6238919 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGF 6238788
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
WM R++D W T+ W N+M Y+YC D RFP PAEC
Sbjct: 6220936 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 6221058
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0622F03
Length = 170064
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 151127 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 151249
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +2
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 150896 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 151021
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / +2
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P+ +P+ + A++W+ WAT+ GRV DWS APFV +YR Y
Sbjct: 155813 VPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 155944
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / +2
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
WM R++D W T+ W N+M Y+YC D RFP PAEC
Sbjct: 156017 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 156139
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0028E05
Length = 157631
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 58336 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 58458
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / +1
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 58105 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 58230
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P+ +P+ + A++W+ WAT+ GRV DWS APFV +YR Y
Sbjct: 63022 VPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 63153
Score = 62.5 bits (130), Expect(2) = 1e-020
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -2 / -1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAECA 338
W N++LD +RW + +M YNYC D RFPQG+PAEC+
Sbjct: 80972 WYNQELDLTRQQRMRWVQSKYMIYNYCTDPKRFPQGVPAECS 80847
Score = 61.6 bits (128), Expect(2) = 1e-020
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = -2 / -1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+ +P ++PM L+++LW+ WAT+ GRV DW+ APF SYR +
Sbjct: 81209 IAFPKNQPMRLYSSLWNADDWATQGGRVKTDWTHAPFSASYRGF 81078
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
WM R++D W T+ W N+M Y+YC D RFP PAEC
Sbjct: 63226 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 63348
>gb|AACV01014850.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014850, whole
genome shotgun sequence
Length = 60324
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++L + +RW +R FM YNYC D RFPQG PAEC
Sbjct: 45772 WWNQELSDMSYRRMRWVQRKFMIYNYCTDAKRFPQGTPAEC 45650
Score = 64.8 bits (135), Expect(2) = 1e-022
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -2 / -3
Query: 643 YPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P S+PM ++A+LW+ WAT+ GRV DWS APFV S+R +
Sbjct: 46003 FPKSQPMRVYASLWNADDWATQGGRVKADWSKAPFVASFRDF 45878
Score = 63.8 bits (133), Expect(2) = 7e-021
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -2 / -3
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+P+P+ +P+ + A++W+ WAT+ GRV DWS APFV +YR Y
Sbjct: 41086 VPFPTRQPVHVFASIWNAEEWATQGGRVKTDWSRAPFVATYRRY 40955
Score = 60.6 bits (126), Expect(2) = 7e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2 / -3
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
WM R++D W T+ W N+M Y+YC D RFP PAEC
Sbjct: 40882 WMRRRMDWWSWMTLNWVRMNYMAYDYCADRKRFPHRFPAEC 40760
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 110 bits (234), Expect = 2e-022
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2 / -2
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM L ATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 10685181 FQVDDVPVRTFKKYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 10685002
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 110 bits (234), Expect = 2e-022
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2 / -2
Query: 697 FKVDDLFIRSFKRYADLPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
F+VDD+ +R+FK+Y DL YP S+PM L ATLWDGSYWAT G V IDWS APFVVSYR Y
Sbjct: 35886902 FQVDDVPVRTFKKYDDLAYPQSKPMRLDATLWDGSYWATRHGDVKIDWSGAPFVVSYRGY 35886723
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 861
Score = 61.6 bits (128), Expect(3) = 2e-021
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = -2 / +1
Query: 649 LPYPSSRPMTLHATLWDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
+PYP+ +PM ++ ++W+ WAT GRV DWS APF +R+Y
Sbjct: 535 VPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNY 666
Score = 41.8 bits (85), Expect(3) = 2e-021
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLPAEC 341
W N++LD ++ + N+ Y+YC D RF LP EC
Sbjct: 727 WFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKEC 849
Score = 40.9 bits (83), Expect(3) = 2e-021
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / +1
Query: 736 HTYTIIWNPTSILFKVDDLFIRSFK 662
HTYTIIWN +IL VDD IR K
Sbjct: 442 HTYTIIWNQRNILILVDDKLIRQIK 516
>gb|AU032208.1|AU032208 AU032208 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3694_8Z, mRNA sequence
Length = 560
Score = 65.7 bits (137), Expect(2) = 6e-021
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -2 / +1
Query: 463 WMNRQLDSAEWGTVRWAERNFMRYNYCQDGWRFPQGLP 350
W++R+LD AE GTV WAERN+M YNYC DG P+ P
Sbjct: 163 WIHRELDGAELGTVAWAERNYMSYNYCADGGASPRASP 276
Score = 59.3 bits (123), Expect(2) = 6e-021
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = -2 / +1
Query: 604 WDGSYWATEKGRVGIDWSDAPFVVSYRSY 518
WDGS WAT G V IDWS APFVVSYR Y
Sbjct: 1 WDGSXWATRHGDVKIDWSGAPFVVSYRGY 87
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,247,395,760
Number of Sequences: 438736
Number of extensions: 63082745
Number of successful extensions: 407143
Number of sequences better than 1.0e-020: 51
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 175164461033
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)