TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440419.2.1
(616 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP005458.3| Oryza sativa (japonica cultivar-group) geno... 305 2e-081
gb|AACV01014361.1| Oryza sativa (japonica cultivar-group) c... 305 2e-081
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 305 2e-081
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 305 2e-081
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 305 2e-081
ref|NT_107109.1| Oryza sativa (japonica cultivar-group) gen... 120 7e-050
dbj|AP005471.2| Oryza sativa (japonica cultivar-group) geno... 120 7e-050
dbj|AK105605.1| Oryza sativa (japonica cultivar-group) cDNA... 120 7e-050
gb|AACV01014367.1| Oryza sativa (japonica cultivar-group) c... 120 4e-049
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 118 3e-045
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 118 3e-045
dbj|AP005422.3| Oryza sativa (japonica cultivar-group) geno... 118 3e-045
gb|AACV01019784.1| Oryza sativa (japonica cultivar-group) c... 118 3e-045
ref|XM_450643.1| Oryza sativa (japonica cultivar-group), mRNA 118 3e-045
gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromo... 99 3e-029
gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) c... 99 3e-029
dbj|AK110881.1| Oryza sativa (japonica cultivar-group) cDNA... 99 4e-029
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 118 6e-025
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 118 6e-025
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0567G03
Length = 196834
Score = 305 bits (661), Expect = 2e-081
Identities = 120/156 (76%), Positives = 128/156 (82%)
Frame = -3 / +3
Query: 581 ETFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDF 402
+TF R YDV PP NPNTT GDNVYVLAHN TVDV+LQNANAL+RNVSEVHPWHLHGHDF
Sbjct: 106896 DTFGRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDF 107075
Query: 401 WVLXXXXXXXXXXXXXXXRLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPH 222
WVL LNLR+PPLRNTAVIFPYGWT +RFVADNPGVWAFHCHIEPH
Sbjct: 107076 WVLGYGDGAFRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPH 107255
Query: 221 LHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALMAG 114
LHMGMGVIFAEAVD V+++P AVSCGA ATALMAG
Sbjct: 107256 LHMGMGVIFAEAVDRVSELPKAAVSCGATATALMAG 107363
Score = 136 bits (291), Expect(2) = 5e-061
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q+TA+LG+ TRSTASAKMTPMPMWRCGS+WQW AHTPGLSATNR VHPYGK+TAVFRS
Sbjct: 107332 QETAALGSSLTRSTASAKMTPMPMWRCGSMWQWNAHTPGLSATNRIAVHPYGKITAVFRS 107153
Query: 325 GG 330
GG
Sbjct: 107152 GG 107147
Score = 122 bits (261), Expect(2) = 5e-061
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKS PWRCHGCTSLT R SA AFWS+TSTV LCA TYTLSP VV GF GG +TSY R N
Sbjct: 107080 TQKSCPWRCHGCTSLTFRASAFAFWSTTSTVALCASTYTLSPTVVFGFAGGRITSYPRPN 106901
Query: 577 VSAXRAA 597
VS AA
Sbjct: 106900 VSDGLAA 106880
Score = 120 bits (256), Expect(2) = 7e-050
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +1
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 164014 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 164178
Score = 101 bits (215), Expect(2) = 7e-050
Identities = 39/61 (63%), Positives = 42/61 (68%)
Frame = -3 / +1
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP N TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 163786 FPEDYDVMRPPANNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 163965
Query: 395 L 393
L
Sbjct: 163966 L 163968
Score = 100 bits (212), Expect(2) = 1e-039
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / -3
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 164177 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 164028
Score = 97.7 bits (207), Expect(3) = 9e-040
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +3 / -3
Query: 114 AGHERGGRGATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
AGHERGG GA G +G L D VD L EDDAHAHVEVRLD+AVE PH VVRHEP+
Sbjct: 107363 AGHERGGGGAAGDGRLGELADAVDGLGEDDAHAHVEVRLDVAVERPHPGVVRHEPD 107196
Score = 87.2 bits (184), Expect(2) = 1e-039
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 163964 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVALFAGGLITS*SSGN 163785
Query: 577 VS 582
+
Sbjct: 163784 AA 163779
Score = 66.1 bits (138), Expect(3) = 9e-040
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3 / -3
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGGVVRQ 503
QHPEVV VEVPRVHLADV RQRV VLE HV VVR+
Sbjct: 107084 QHPEVVPVEVPRVHLADVPRQRVRVLEHHVHRRVVRE 106974
Score = 41.8 bits (85), Expect(3) = 9e-040
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 506 RTRCPPPSCWGSAAAASRRIPG*TSPRXAPPASVDLS 616
RTRC PP C GS AAASRR T +PP S
Sbjct: 106971 RTRCRPPWCSGSPAAASRRTRARTCRTASPPTGAPTS 106861
>gb|AACV01014361.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014361, whole
genome shotgun sequence
Length = 28349
Score = 305 bits (661), Expect = 2e-081
Identities = 120/156 (76%), Positives = 128/156 (82%)
Frame = -3 / +2
Query: 581 ETFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDF 402
+TF R YDV PP NPNTT GDNVYVLAHN TVDV+LQNANAL+RNVSEVHPWHLHGHDF
Sbjct: 24092 DTFGRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDF 24271
Query: 401 WVLXXXXXXXXXXXXXXXRLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPH 222
WVL LNLR+PPLRNTAVIFPYGWT +RFVADNPGVWAFHCHIEPH
Sbjct: 24272 WVLGYGDGAFRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPH 24451
Query: 221 LHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALMAG 114
LHMGMGVIFAEAVD V+++P AVSCGA ATALMAG
Sbjct: 24452 LHMGMGVIFAEAVDRVSELPKAAVSCGATATALMAG 24559
Score = 136 bits (291), Expect(2) = 5e-061
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q+TA+LG+ TRSTASAKMTPMPMWRCGS+WQW AHTPGLSATNR VHPYGK+TAVFRS
Sbjct: 24528 QETAALGSSLTRSTASAKMTPMPMWRCGSMWQWNAHTPGLSATNRIAVHPYGKITAVFRS 24349
Query: 325 GG 330
GG
Sbjct: 24348 GG 24343
Score = 122 bits (261), Expect(2) = 5e-061
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKS PWRCHGCTSLT R SA AFWS+TSTV LCA TYTLSP VV GF GG +TSY R N
Sbjct: 24276 TQKSCPWRCHGCTSLTFRASAFAFWSTTSTVALCASTYTLSPTVVFGFAGGRITSYPRPN 24097
Query: 577 VSAXRAA 597
VS AA
Sbjct: 24096 VSDGLAA 24076
Score = 97.7 bits (207), Expect(3) = 1e-039
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +3 / -2
Query: 114 AGHERGGRGATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
AGHERGG GA G +G L D VD L EDDAHAHVEVRLD+AVE PH VVRHEP+
Sbjct: 24559 AGHERGGGGAAGDGRLGELADAVDGLGEDDAHAHVEVRLDVAVERPHPGVVRHEPD 24392
Score = 66.1 bits (138), Expect(3) = 1e-039
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3 / -2
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGGVVRQ 503
QHPEVV VEVPRVHLADV RQRV VLE HV VVR+
Sbjct: 24280 QHPEVVPVEVPRVHLADVPRQRVRVLEHHVHRRVVRE 24170
Score = 41.8 bits (85), Expect(3) = 1e-039
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +2 / -1
Query: 506 RTRCPPPSCWGSAAAASRRIPG*TSPRXAPPASVDLS 616
RTRC PP C GS AAASRR T +PP S
Sbjct: 24167 RTRCRPPWCSGSPAAASRRTRARTCRTASPPTGAPTS 24057
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 305 bits (661), Expect = 2e-081
Identities = 120/156 (76%), Positives = 128/156 (82%)
Frame = -3 / +1
Query: 581 ETFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDF 402
+TF R YDV PP NPNTT GDNVYVLAHN TVDV+LQNANAL+RNVSEVHPWHLHGHDF
Sbjct: 2967547 DTFGRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDF 2967726
Query: 401 WVLXXXXXXXXXXXXXXXRLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPH 222
WVL LNLR+PPLRNTAVIFPYGWT +RFVADNPGVWAFHCHIEPH
Sbjct: 2967727 WVLGYGDGAFRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPH 2967906
Query: 221 LHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALMAG 114
LHMGMGVIFAEAVD V+++P AVSCGA ATALMAG
Sbjct: 2967907 LHMGMGVIFAEAVDRVSELPKAAVSCGATATALMAG 2968014
Score = 136 bits (291), Expect(2) = 5e-061
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q+TA+LG+ TRSTASAKMTPMPMWRCGS+WQW AHTPGLSATNR VHPYGK+TAVFRS
Sbjct: 2967983 QETAALGSSLTRSTASAKMTPMPMWRCGSMWQWNAHTPGLSATNRIAVHPYGKITAVFRS 2967804
Query: 325 GG 330
GG
Sbjct: 2967803 GG 2967798
Score = 122 bits (261), Expect(2) = 5e-061
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKS PWRCHGCTSLT R SA AFWS+TSTV LCA TYTLSP VV GF GG +TSY R N
Sbjct: 2967731 TQKSCPWRCHGCTSLTFRASAFAFWSTTSTVALCASTYTLSPTVVFGFAGGRITSYPRPN 2967552
Query: 577 VSAXRAA 597
VS AA
Sbjct: 2967551 VSDGLAA 2967531
Score = 120 bits (256), Expect(2) = 4e-049
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 3018026 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 3018190
Score = 100 bits (212), Expect(2) = 8e-040
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / -3
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 3018189 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 3018040
Score = 98.7 bits (209), Expect(2) = 4e-049
Identities = 38/61 (62%), Positives = 41/61 (67%)
Frame = -3 / +2
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 3017798 FPEDYDVMRPPAKNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 3017977
Query: 395 L 393
L
Sbjct: 3017978 L 3017980
Score = 97.7 bits (207), Expect(3) = 9e-040
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +3 / -3
Query: 114 AGHERGGRGATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
AGHERGG GA G +G L D VD L EDDAHAHVEVRLD+AVE PH VVRHEP+
Sbjct: 2968014 AGHERGGGGAAGDGRLGELADAVDGLGEDDAHAHVEVRLDVAVERPHPGVVRHEPD 2967847
Score = 87.7 bits (185), Expect(2) = 8e-040
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 3017976 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVAFFAGGLITS*SSGN 3017797
Query: 577 VS 582
+
Sbjct: 3017796 AA 3017791
Score = 66.1 bits (138), Expect(3) = 9e-040
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3 / -3
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGGVVRQ 503
QHPEVV VEVPRVHLADV RQRV VLE HV VVR+
Sbjct: 2967735 QHPEVVPVEVPRVHLADVPRQRVRVLEHHVHRRVVRE 2967625
Score = 41.8 bits (85), Expect(3) = 9e-040
Identities = 19/37 (51%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 506 RTRCPPPSCWGSAAAASRRIPG*TSPRXAPPASVDLS 616
RTRC PP C GS AAASRR T +PP S
Sbjct: 2967622 RTRCRPPWCSGSPAAASRRTRARTCRTASPPTGAPTS 2967512
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 305 bits (661), Expect = 2e-081
Identities = 120/156 (76%), Positives = 128/156 (82%)
Frame = -3 / +1
Query: 581 ETFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDF 402
+TF R YDV PP NPNTT GDNVYVLAHN TVDV+LQNANAL+RNVSEVHPWHLHGHDF
Sbjct: 20666284 DTFGRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDF 20666463
Query: 401 WVLXXXXXXXXXXXXXXXRLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPH 222
WVL LNLR+PPLRNTAVIFPYGWT +RFVADNPGVWAFHCHIEPH
Sbjct: 20666464 WVLGYGDGAFRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPH 20666643
Query: 221 LHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALMAG 114
LHMGMGVIFAEAVD V+++P AVSCGA ATALMAG
Sbjct: 20666644 LHMGMGVIFAEAVDRVSELPKAAVSCGATATALMAG 20666751
Score = 136 bits (291), Expect(2) = 5e-061
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1 / -3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q+TA+LG+ TRSTASAKMTPMPMWRCGS+WQW AHTPGLSATNR VHPYGK+TAVFRS
Sbjct: 20666720 QETAALGSSLTRSTASAKMTPMPMWRCGSMWQWNAHTPGLSATNRIAVHPYGKITAVFRS 20666541
Query: 325 GG 330
GG
Sbjct: 20666540 GG 20666535
Score = 122 bits (261), Expect(2) = 5e-061
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1 / -3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKS PWRCHGCTSLT R SA AFWS+TSTV LCA TYTLSP VV GF GG +TSY R N
Sbjct: 20666468 TQKSCPWRCHGCTSLTFRASAFAFWSTTSTVALCASTYTLSPTVVFGFAGGRITSYPRPN 20666289
Query: 577 VSAXRAA 597
VS AA
Sbjct: 20666288 VSDGLAA 20666268
Score = 120 bits (256), Expect = 2e-025
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 20716763 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 20716927
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 305 bits (661), Expect = 2e-081
Identities = 120/156 (76%), Positives = 128/156 (82%)
Frame = -3 / +1
Query: 581 ETFSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDF 402
+TF R YDV PP NPNTT GDNVYVLAHN TVDV+LQNANAL+RNVSEVHPWHLHGHDF
Sbjct: 21549712 DTFGRGYDVMRPPANPNTTVGDNVYVLAHNATVDVVLQNANALARNVSEVHPWHLHGHDF 21549891
Query: 401 WVLXXXXXXXXXXXXXXXRLNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPH 222
WVL LNLR+PPLRNTAVIFPYGWT +RFVADNPGVWAFHCHIEPH
Sbjct: 21549892 WVLGYGDGAFRGDAGDAAALNLRNPPLRNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPH 21550071
Query: 221 LHMGMGVIFAEAVDLVAKVPNEAVSCGAXATALMAG 114
LHMGMGVIFAEAVD V+++P AVSCGA ATALMAG
Sbjct: 21550072 LHMGMGVIFAEAVDRVSELPKAAVSCGATATALMAG 21550179
Score = 136 bits (291), Expect(2) = 5e-061
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +1 / -2
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRS 324
Q+TA+LG+ TRSTASAKMTPMPMWRCGS+WQW AHTPGLSATNR VHPYGK+TAVFRS
Sbjct: 21550148 QETAALGSSLTRSTASAKMTPMPMWRCGSMWQWNAHTPGLSATNRIAVHPYGKITAVFRS 21549969
Query: 325 GG 330
GG
Sbjct: 21549968 GG 21549963
Score = 122 bits (261), Expect(2) = 5e-061
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKS PWRCHGCTSLT R SA AFWS+TSTV LCA TYTLSP VV GF GG +TSY R N
Sbjct: 21549896 TQKSCPWRCHGCTSLTFRASAFAFWSTTSTVALCASTYTLSPTVVFGFAGGRITSYPRPN 21549717
Query: 577 VSAXRAA 597
VS AA
Sbjct: 21549716 VSDGLAA 21549696
Score = 120 bits (256), Expect(2) = 6e-050
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 21606830 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 21606994
Score = 101 bits (215), Expect(2) = 6e-050
Identities = 39/61 (63%), Positives = 42/61 (68%)
Frame = -3 / +2
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP N TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 21606602 FPEDYDVMRPPANNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 21606781
Query: 395 L 393
L
Sbjct: 21606782 L 21606784
>ref|NT_107109.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0062E01, complete sequence
Length = 161804
Score = 120 bits (256), Expect(2) = 7e-050
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +1
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 5761 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 5925
Score = 101 bits (215), Expect(2) = 7e-050
Identities = 39/61 (63%), Positives = 42/61 (68%)
Frame = -3 / +1
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP N TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 5533 FPEDYDVMRPPANNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 5712
Query: 395 L 393
L
Sbjct: 5713 L 5715
Score = 100 bits (212), Expect(2) = 1e-039
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / -1
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 5924 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 5775
Score = 87.2 bits (184), Expect(2) = 1e-039
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 5711 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVALFAGGLITS*SSGN 5532
Query: 577 VS 582
+
Sbjct: 5531 AA 5526
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0062E01
Length = 161804
Score = 120 bits (256), Expect(2) = 7e-050
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +1
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 5761 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 5925
Score = 101 bits (215), Expect(2) = 7e-050
Identities = 39/61 (63%), Positives = 42/61 (68%)
Frame = -3 / +1
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP N TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 5533 FPEDYDVMRPPANNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 5712
Query: 395 L 393
L
Sbjct: 5713 L 5715
Score = 100 bits (212), Expect(2) = 1e-039
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / -1
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 5924 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 5775
Score = 87.2 bits (184), Expect(2) = 1e-039
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 5711 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVALFAGGLITS*SSGN 5532
Query: 577 VS 582
+
Sbjct: 5531 AA 5526
>dbj|AK105605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A11, full
insert sequence
Length = 2191
Score = 120 bits (256), Expect(2) = 7e-050
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / +2
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 1709 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 1873
Score = 101 bits (215), Expect(2) = 7e-050
Identities = 39/61 (63%), Positives = 42/61 (68%)
Frame = -3 / +2
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP N TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 1481 FPEDYDVMRPPANNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 1660
Query: 395 L 393
L
Sbjct: 1661 L 1663
Score = 100 bits (212), Expect(2) = 1e-039
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / -2
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 1872 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 1723
Score = 87.2 bits (184), Expect(2) = 1e-039
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 1659 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVALFAGGLITS*SSGN 1480
Query: 577 VS 582
+
Sbjct: 1479 AA 1474
>gb|AACV01014367.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014367, whole
genome shotgun sequence
Length = 15096
Score = 120 bits (256), Expect(2) = 4e-049
Identities = 43/55 (78%), Positives = 47/55 (85%)
Frame = -3 / -3
Query: 344 LNLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVD 180
LN DPPLRNTAV+FP+GWT LRFVA+N G WAFHCHIEPHLHMGMGV+F E D
Sbjct: 3037 LNAADPPLRNTAVVFPHGWTALRFVANNTGAWAFHCHIEPHLHMGMGVVFVEGED 2873
Score = 100 bits (212), Expect(2) = 9e-040
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +1 / +3
Query: 181 STASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVFRSGG 330
S+ S K TPMPMWRCGS+WQW AH P L ATNRS VHP GK TAVFRSGG
Sbjct: 2874 SSPSTKTTPMPMWRCGSMWQWNAHAPVLLATNRSAVHPCGKTTAVFRSGG 3023
Score = 98.7 bits (209), Expect(2) = 4e-049
Identities = 38/61 (62%), Positives = 41/61 (67%)
Frame = -3 / -3
Query: 575 FSREYDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWV 396
F +YDV PP TTA D V+ L H VDV+LQNAN L VSE HPWHLHGHDFWV
Sbjct: 3265 FPEDYDVMRPPAKNATTASDRVFRLRHGGVVDVVLQNANMLREEVSETHPWHLHGHDFWV 3086
Query: 395 L 393
L
Sbjct: 3085 L 3083
Score = 87.7 bits (185), Expect(2) = 9e-040
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +1 / +3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTSYSRLN 576
TQKSWPWRCHGC SLT S LAFWS+TST C TLS AVV F GG +TS S N
Sbjct: 3087 TQKSWPWRCHGCVSLTSSLSMLAFWSTTSTTPPCRSRNTLSLAVVAFFAGGLITS*SSGN 3266
Query: 577 VS 582
+
Sbjct: 3267 AA 3272
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 118 bits (252), Expect(2) = 3e-045
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 1364762 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 1364583
Query: 161 NEAVSCG 141
E + CG
Sbjct: 1364582 PEIMGCG 1364562
Score = 99.1 bits (210), Expect(2) = 6e-028
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3 / +2
Query: 323 LRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSC 144
++NT + P GWT +RF A NPGVW FHCH+E H++MGMGV+F E VD++ ++P + C
Sbjct: 8901773 MKNTVALHPMGWTAVRFRASNPGVWLFHCHLEAHVYMGMGVVFEEGVDVLPRLPASIMGC 8901952
Query: 143 G 141
G
Sbjct: 8901953 G 8901955
Score = 87.7 bits (185), Expect(2) = 3e-045
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
+DV NPN T D Y L + VDV+LQNAN L+ N SE HPWHLHGHDFWVL
Sbjct: 1364981 FDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVL 1364811
Score = 85.4 bits (180), Expect(2) = 6e-031
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +1 / +1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVF 318
Q S G+ TRST S+K PMPM +C S+WQW AHTPGLSA NRS VHP G VF
Sbjct: 1364566 QPMISGGSSPTRSTPSSKTMPMPMKKCASMWQWNAHTPGLSALNRSAVHPNGCTATVF 1364739
Score = 72.5 bits (152), Expect(2) = 6e-031
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / +1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKSWPWRCHGC SL S LAFWS+TST Y S V LGF + TS
Sbjct: 1364815 TQKSWPWRCHGCVSLLFAASMLAFWSTTSTTEPNRSRYGASLVVALGFPCTAYTS 1364979
Score = 68.9 bits (144), Expect(2) = 1e-021
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / +3
Query: 141 ATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
A + L L D +D+L EDDAHAH EVRLD+AVE PHA VVR EPE
Sbjct: 1364562 AAAHDLRRQLADALDALLEDDAHAHEEVRLDVAVERPHAGVVRPEPE 1364702
Score = 57.4 bits (119), Expect(2) = 1e-021
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGG 491
+HPEVVAVEVPRV LA V RQ VGVLE VD G
Sbjct: 1364811 EHPEVVAVEVPRVRLAAVRRQHVGVLEHDVDDG 1364909
Score = 48.7 bits (100), Expect(2) = 6e-028
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 440 SEVHPWHLHGHDFWVL 393
SE HPWHLHGHDFWVL
Sbjct: 8901647 SETHPWHLHGHDFWVL 8901694
>ref|NT_107082.1| Oryza sativa (japonica cultivar-group)
Length = 2185602
Score = 118 bits (252), Expect(2) = 3e-045
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 610438 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 610259
Query: 161 NEAVSCG 141
E + CG
Sbjct: 610258 PEIMGCG 610238
Score = 87.7 bits (185), Expect(2) = 3e-045
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
+DV NPN T D Y L + VDV+LQNAN L+ N SE HPWHLHGHDFWVL
Sbjct: 610657 FDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVL 610487
Score = 85.4 bits (180), Expect(2) = 6e-031
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +1 / +3
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVF 318
Q S G+ TRST S+K PMPM +C S+WQW AHTPGLSA NRS VHP G VF
Sbjct: 610242 QPMISGGSSPTRSTPSSKTMPMPMKKCASMWQWNAHTPGLSALNRSAVHPNGCTATVF 610415
Score = 72.5 bits (152), Expect(2) = 6e-031
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / +3
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKSWPWRCHGC SL S LAFWS+TST Y S V LGF + TS
Sbjct: 610491 TQKSWPWRCHGCVSLLFAASMLAFWSTTSTTEPNRSRYGASLVVALGFPCTAYTS 610655
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / +2
Query: 141 ATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
A + L L D +D+L EDDAHAH EVRLD+AVE PHA VVR EPE
Sbjct: 610238 AAAHDLRRQLADALDALLEDDAHAHEEVRLDVAVERPHAGVVRPEPE 610378
Score = 57.4 bits (119), Expect(2) = 2e-021
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / +2
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGG 491
+HPEVVAVEVPRV LA V RQ VGVLE VD G
Sbjct: 610487 EHPEVVAVEVPRVRLAAVRRQHVGVLEHDVDDG 610585
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0441A12
Length = 185437
Score = 118 bits (252), Expect(2) = 3e-045
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 81230 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 81051
Query: 161 NEAVSCG 141
E + CG
Sbjct: 81050 PEIMGCG 81030
Score = 87.7 bits (185), Expect(2) = 3e-045
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
+DV NPN T D Y L + VDV+LQNAN L+ N SE HPWHLHGHDFWVL
Sbjct: 81449 FDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVL 81279
Score = 85.4 bits (180), Expect(2) = 6e-031
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +1 / +1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVF 318
Q S G+ TRST S+K PMPM +C S+WQW AHTPGLSA NRS VHP G VF
Sbjct: 81034 QPMISGGSSPTRSTPSSKTMPMPMKKCASMWQWNAHTPGLSALNRSAVHPNGCTATVF 81207
Score = 72.5 bits (152), Expect(2) = 6e-031
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / +1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKSWPWRCHGC SL S LAFWS+TST Y S V LGF + TS
Sbjct: 81283 TQKSWPWRCHGCVSLLFAASMLAFWSTTSTTEPNRSRYGASLVVALGFPCTAYTS 81447
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / +3
Query: 141 ATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
A + L L D +D+L EDDAHAH EVRLD+AVE PHA VVR EPE
Sbjct: 81030 AAAHDLRRQLADALDALLEDDAHAHEEVRLDVAVERPHAGVVRPEPE 81170
Score = 57.4 bits (119), Expect(2) = 2e-021
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGG 491
+HPEVVAVEVPRV LA V RQ VGVLE VD G
Sbjct: 81279 EHPEVVAVEVPRVRLAAVRRQHVGVLEHDVDDG 81377
>gb|AACV01019784.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019784, whole
genome shotgun sequence
Length = 58582
Score = 118 bits (252), Expect(2) = 3e-045
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / +3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 21234 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 21413
Query: 161 NEAVSCG 141
E + CG
Sbjct: 21414 PEIMGCG 21434
Score = 87.7 bits (185), Expect(2) = 3e-045
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -3 / +3
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
+DV NPN T D Y L + VDV+LQNAN L+ N SE HPWHLHGHDFWVL
Sbjct: 21015 FDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVL 21185
Score = 85.4 bits (180), Expect(2) = 7e-031
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +1 / -1
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVF 318
Q S G+ TRST S+K PMPM +C S+WQW AHTPGLSA NRS VHP G VF
Sbjct: 21430 QPMISGGSSPTRSTPSSKTMPMPMKKCASMWQWNAHTPGLSALNRSAVHPNGCTATVF 21257
Score = 72.5 bits (152), Expect(2) = 7e-031
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / -1
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKSWPWRCHGC SL S LAFWS+TST Y S V LGF + TS
Sbjct: 21181 TQKSWPWRCHGCVSLLFAASMLAFWSTTSTTEPNRSRYGASLVVALGFPCTAYTS 21017
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / -3
Query: 141 ATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
A + L L D +D+L EDDAHAH EVRLD+AVE PHA VVR EPE
Sbjct: 21434 AAAHDLRRQLADALDALLEDDAHAHEEVRLDVAVERPHAGVVRPEPE 21294
Score = 57.4 bits (119), Expect(2) = 2e-021
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / -3
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGG 491
+HPEVVAVEVPRV LA V RQ VGVLE VD G
Sbjct: 21185 EHPEVVAVEVPRVRLAAVRRQHVGVLEHDVDDG 21087
>ref|XM_450643.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1731
Score = 118 bits (252), Expect(2) = 3e-045
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / +1
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 1510 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 1689
Query: 161 NEAVSCG 141
E + CG
Sbjct: 1690 PEIMGCG 1710
Score = 87.7 bits (185), Expect(2) = 3e-045
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = -3 / +1
Query: 563 YDVTLPPPNPNTTAGDNVYVLAHNTTVDVLLQNANALSRNVSEVHPWHLHGHDFWVL 393
+DV NPN T D Y L + VDV+LQNAN L+ N SE HPWHLHGHDFWVL
Sbjct: 1291 FDVYAVQGNPNATTSDAPYRLRFGSVVDVVLQNANMLAANSSETHPWHLHGHDFWVL 1461
Score = 85.4 bits (180), Expect(2) = 7e-031
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +1 / -2
Query: 145 QDTASLGTLATRSTASAKMTPMPMWRCGSIWQWKAHTPGLSATNRSIVHPYGKMTAVF 318
Q S G+ TRST S+K PMPM +C S+WQW AHTPGLSA NRS VHP G VF
Sbjct: 1706 QPMISGGSSPTRSTPSSKTMPMPMKKCASMWQWNAHTPGLSALNRSAVHPNGCTATVF 1533
Score = 72.5 bits (152), Expect(2) = 7e-031
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / -2
Query: 397 TQKSWPWRCHGCTSLTLRDSALAFWSSTSTVVLCARTYTLSPAVVLGFGGGSVTS 561
TQKSWPWRCHGC SL S LAFWS+TST Y S V LGF + TS
Sbjct: 1457 TQKSWPWRCHGCVSLLFAASMLAFWSTTSTTEPNRSRYGASLVVALGFPCTAYTS 1293
Score = 68.9 bits (144), Expect(2) = 2e-021
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +3 / -1
Query: 141 ATGYSLVGHLGDEVDSLSEDDAHAHVEVRLDMAVEGPHARVVRHEPE 281
A + L L D +D+L EDDAHAH EVRLD+AVE PHA VVR EPE
Sbjct: 1710 AAAHDLRRQLADALDALLEDDAHAHEEVRLDVAVERPHAGVVRPEPE 1570
Score = 57.4 bits (119), Expect(2) = 2e-021
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / -1
Query: 393 QHPEVVAVEVPRVHLADVARQRVGVLEQHVDGG 491
+HPEVVAVEVPRV LA V RQ VGVLE VD G
Sbjct: 1461 EHPEVVAVEVPRVRLAAVRRQHVGVLEHDVDDG 1363
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
OSJNBa0072P02, complete sequence
Length = 157488
Score = 99.1 bits (210), Expect(3) = 3e-029
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3 / +1
Query: 323 LRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSC 144
++NT + P GWT +RF A NPGVW FHCH+E H++MGMGV+F E VD++ ++P + C
Sbjct: 89098 MKNTVALHPMGWTAVRFRASNPGVWLFHCHLEAHVYMGMGVVFEEGVDVLPRLPASIMGC 89277
Query: 143 G 141
G
Sbjct: 89278 G 89280
Score = 48.7 bits (100), Expect(3) = 3e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +1
Query: 440 SEVHPWHLHGHDFWVL 393
SE HPWHLHGHDFWVL
Sbjct: 88972 SETHPWHLHGHDFWVL 89019
Score = 22.1 bits (42), Expect(3) = 3e-029
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3 / +1
Query: 557 VTLPPPNPNTTAGDNVYVLAHNTTVDVLLQN 465
+ L P + Y LA + VDV+LQN
Sbjct: 88852 LNLSSPPASLAVRHAAYRLALGSVVDVVLQN 88944
>gb|AACV01020364.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020364, whole
genome shotgun sequence
Length = 66182
Score = 99.1 bits (210), Expect(3) = 3e-029
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3 / +2
Query: 323 LRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSC 144
++NT + P GWT +RF A NPGVW FHCH+E H++MGMGV+F E VD++ ++P + C
Sbjct: 21029 MKNTVALHPMGWTAVRFRASNPGVWLFHCHLEAHVYMGMGVVFEEGVDVLPRLPASIMGC 21208
Query: 143 G 141
G
Sbjct: 21209 G 21211
Score = 48.7 bits (100), Expect(3) = 3e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 440 SEVHPWHLHGHDFWVL 393
SE HPWHLHGHDFWVL
Sbjct: 20903 SETHPWHLHGHDFWVL 20950
Score = 22.1 bits (42), Expect(3) = 3e-029
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3 / +2
Query: 557 VTLPPPNPNTTAGDNVYVLAHNTTVDVLLQN 465
+ L P + Y LA + VDV+LQN
Sbjct: 20783 LNLSSPPASLAVRHAAYRLALGSVVDVVLQN 20875
>dbj|AK110881.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G09, full
insert sequence
Length = 2047
Score = 99.1 bits (210), Expect(3) = 4e-029
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3 / +2
Query: 323 LRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVPNEAVSC 144
++NT + P GWT +RF A NPGVW FHCH+E H++MGMGV+F E VD++ ++P + C
Sbjct: 1646 MKNTVALHPMGWTAVRFRASNPGVWLFHCHLEAHVYMGMGVVFEEGVDVLPRLPASIMGC 1825
Query: 143 G 141
G
Sbjct: 1826 G 1828
Score = 48.7 bits (100), Expect(3) = 4e-029
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / +2
Query: 440 SEVHPWHLHGHDFWVL 393
SE HPWHLHGHDFWVL
Sbjct: 1520 SETHPWHLHGHDFWVL 1567
Score = 22.1 bits (42), Expect(3) = 4e-029
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3 / +2
Query: 557 VTLPPPNPNTTAGDNVYVLAHNTTVDVLLQN 465
+ L P + Y LA + VDV+LQN
Sbjct: 1400 LNLSSPPASLAVRHAAYRLALGSVVDVVLQN 1492
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 118 bits (252), Expect = 6e-025
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / -3
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 10838573 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 10838394
Query: 161 NEAVSCG 141
E + CG
Sbjct: 10838393 PEIMGCG 10838373
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 118 bits (252), Expect = 6e-025
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -3 / -2
Query: 341 NLRDPPLRNTAVIFPYGWTMLRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDLVAKVP 162
NLRDP ++NT + P+GWT LRF ADNPGVWAFHCHIE H MGMG++F E V+ V ++P
Sbjct: 11976750 NLRDPIMKNTVAVHPFGWTALRFRADNPGVWAFHCHIEAHFFMGMGIVFEEGVERVGELP 11976571
Query: 161 NEAVSCG 141
E + CG
Sbjct: 11976570 PEIMGCG 11976550
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,162,774,289
Number of Sequences: 438736
Number of extensions: 43523291
Number of successful extensions: 446632
Number of sequences better than 1.0e-020: 26
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 132571886082
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)