TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440015.2.1
(608 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK108801.1| Oryza sativa (japonica cultivar-group) cDNA... 172 2e-041
gb|CB000452.1|CB000452 S345Z_A05 Rice cold stress germinati... 170 2e-040
gb|AU069030.1|AU069030 AU069030 Rice callus Oryza sativa (j... 168 6e-040
gb|AU069626.1|AU069626 AU069626 Rice callus Oryza sativa (j... 168 6e-040
gb|AU070146.1|AU070146 AU070146 Rice cDNA from immature lea... 168 6e-040
gb|AU160965.1|AU160965 AU160965 Rice callus Oryza sativa (j... 168 6e-040
gb|AU182122.1|AU182122 AU182122 Rice callus (2001) Oryza sa... 168 6e-040
gb|CF279663.1|CF279663 14ETL--06-A19.b1 Rice etiolated leaf... 168 6e-040
gb|CF281216.1|CF281216 14ETL--08-C24.b1 Rice etiolated leaf... 168 6e-040
gb|CF282464.1|CF282464 14ETL--09-P23.g1 Rice etiolated leaf... 168 6e-040
gb|CF313441.1|CF313441 HD--01-J06.b1 OsHDAC1-overexpressing... 168 6e-040
gb|CF313442.1|CF313442 HD--01-J06.g1 OsHDAC1-overexpressing... 168 6e-040
gb|CF318454.1|CF318454 HD--08-J10.b1 OsHDAC1-overexpressing... 168 6e-040
gb|CF318455.1|CF318455 HD--08-J10.g1 OsHDAC1-overexpressing... 168 6e-040
gb|CF322393.1|CF322393 HD--13-P15.b1 OsHDAC1-overexpressing... 168 6e-040
gb|CF322394.1|CF322394 HD--13-P15.g1 OsHDAC1-overexpressing... 168 6e-040
gb|CF328622.1|CF328622 NACL--03-J22.b1 Rice callus plasmid ... 168 6e-040
gb|CF328623.1|CF328623 NACL--03-J22.g1 Rice callus plasmid ... 168 6e-040
gb|CF330865.1|CF330865 NACL--06-M04.g1 Rice callus plasmid ... 168 6e-040
gb|CF338295.1|CF338295 RCL1--01-D20.g1 Regenerated callus l... 168 6e-040
gb|CF338402.1|CF338402 RCL1--01-J04.g1 Regenerated callus l... 168 6e-040
gb|CF338721.1|CF338721 RCL1--02-J06.g1 Regenerated callus l... 168 6e-040
gb|CF338999.1|CF338999 RCL1--03-H14.g1 Regenerated callus l... 168 6e-040
gb|CF340484.1|CF340484 RCL1--08-C19.g1 Regenerated callus l... 168 6e-040
gb|CV724065.1|CV724065 root--05-L05.g1 Rice root lambda pha... 168 6e-040
gb|CV727149.1|CV727149 14Salt--05-C13.g1 Salt treated rice ... 168 6e-040
gb|CV729634.1|CV729634 FLO--02-L11.b1 Rice flower lambda ph... 168 6e-040
gb|CV729635.1|CV729635 FLO--02-L11.g1 Rice flower lambda ph... 168 6e-040
gb|CV732315.1|CV732315 FLO--06-L21.b1 Rice flower lambda ph... 168 6e-040
dbj|AK062318.1| Oryza sativa (japonica cultivar-group) cDNA... 168 6e-040
dbj|AK103639.1| Oryza sativa (japonica cultivar-group) cDNA... 168 6e-040
gb|CF281217.1|CF281217 14ETL--08-C24.g1 Rice etiolated leaf... 166 2e-039
gb|CV729680.1|CV729680 FLO--02-M21.b1 Rice flower lambda ph... 166 2e-039
gb|CF291592.1|CF291592 14ROOT--02-B10.b1 Rice root plasmid ... 164 7e-039
gb|CF339489.1|CF339489 RCL1--05-A08.g1 Regenerated callus l... 164 1e-038
gb|CV724434.1|CV724434 14Salt--01-A05.b1 Salt treated rice ... 163 1e-038
gb|CV732111.1|CV732111 FLO--06-H02.g1 Rice flower lambda ph... 162 3e-038
gb|CV731417.1|CV731417 FLO--05-H04.g1 Rice flower lambda ph... 159 2e-037
gb|AU160966.1|AU160966 AU160966 Rice callus Oryza sativa (j... 145 2e-036
gb|CA999568.1|CA999568 S345P_C05 Rice cold stress germinati... 154 8e-036
gb|AU101331.1|AU101331 AU101331 Rice panicle at ripening st... 143 8e-036
gb|C19813.1|C19813 C19813 Rice panicle at ripening stage Or... 154 1e-035
gb|CV729529.1|CV729529 FLO--02-H23.b1 Rice flower lambda ph... 151 5e-035
gb|D23218.1|D23218 RICC2445A Rice callus Oryza sativa (japo... 128 5e-035
gb|CF315360.1|CF315360 HD--04-E02.b1 OsHDAC1-overexpressing... 110 8e-035
gb|CF315361.1|CF315361 HD--04-E02.g1 OsHDAC1-overexpressing... 110 8e-035
gb|CF279664.1|CF279664 14ETL--06-A19.g1 Rice etiolated leaf... 93 4e-033
gb|CV724435.1|CV724435 14Salt--01-A05.g1 Salt treated rice ... 131 6e-029
gb|CF282463.1|CF282463 14ETL--09-P23.b1 Rice etiolated leaf... 127 1e-027
gb|AACV01022522.1| Oryza sativa (japonica cultivar-group) c... 73 8e-024
gb|AC145322.2| Oryza sativa (japonica cultivar-group) chrom... 73 3e-023
ref|NT_107142.1| Oryza sativa (japonica cultivar-group) 73 1e-022
emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC O... 73 2e-021
>dbj|AK108801.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C09, full
insert sequence
Length = 540
Score = 172 bits (371), Expect = 2e-041
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3 / +2
Query: 546 PQLRVPXXXXXAKMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRR 367
P P AKMIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRR
Sbjct: 5 PSPEPPIPAAAAKMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRR 184
Query: 366 MLMTHVDLIEKLLNYNTLEKTETS 295
MLMTHVDLIEKLLNYNTLEKTET+
Sbjct: 185 MLMTHVDLIEKLLNYNTLEKTETT 256
>gb|CB000452.1|CB000452 S345Z_A05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 535
Score = 170 bits (365), Expect = 2e-040
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
KMIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 16 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 195
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 196 LNYNTLEKTETT 231
>gb|AU069030.1|AU069030 AU069030 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51745_11A, mRNA sequence
Length = 424
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 74 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 253
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 254 LNYNTLEKTETA 289
>gb|AU069626.1|AU069626 AU069626 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63427_7A, mRNA sequence
Length = 421
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 73 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 252
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 253 LNYNTLEKTETA 288
>gb|AU070146.1|AU070146 AU070146 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60430_1A, mRNA sequence
Length = 443
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 78 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 257
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 258 LNYNTLEKTETA 293
>gb|AU160965.1|AU160965 AU160965 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52967, mRNA sequence
Length = 398
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 74 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 253
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 254 LNYNTLEKTETA 289
>gb|AU182122.1|AU182122 AU182122 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C63570, mRNA sequence
Length = 452
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 73 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 252
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 253 LNYNTLEKTETA 288
>gb|CF279663.1|CF279663 14ETL--06-A19.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-A19, mRNA sequence
Length = 473
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 450 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 271
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 270 LNYNTLEKTETA 235
>gb|CF281216.1|CF281216 14ETL--08-C24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-C24, mRNA sequence
Length = 499
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 109 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 288
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 289 LNYNTLEKTETA 324
>gb|CF282464.1|CF282464 14ETL--09-P23.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-P23, mRNA sequence
Length = 491
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 82 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 261
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 262 LNYNTLEKTETA 297
>gb|CF313441.1|CF313441 HD--01-J06.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-J06, mRNA sequence
Length = 535
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 80 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 259
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 260 LNYNTLEKTETA 295
>gb|CF313442.1|CF313442 HD--01-J06.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-J06, mRNA sequence
Length = 478
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 455 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 276
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 275 LNYNTLEKTETA 240
>gb|CF318454.1|CF318454 HD--08-J10.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-J10, mRNA sequence
Length = 462
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 427 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 248
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 247 LNYNTLEKTETA 212
>gb|CF318455.1|CF318455 HD--08-J10.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-J10, mRNA sequence
Length = 448
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 22 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 201
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 202 LNYNTLEKTETA 237
>gb|CF322393.1|CF322393 HD--13-P15.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-P15, mRNA sequence
Length = 455
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 375 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 196
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 195 LNYNTLEKTETA 160
>gb|CF322394.1|CF322394 HD--13-P15.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-P15, mRNA sequence
Length = 472
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 98 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 277
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 278 LNYNTLEKTETA 313
>gb|CF328622.1|CF328622 NACL--03-J22.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--03-J22, mRNA sequence
Length = 474
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 451 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 272
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 271 LNYNTLEKTETA 236
>gb|CF328623.1|CF328623 NACL--03-J22.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--03-J22, mRNA sequence
Length = 531
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 80 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 259
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 260 LNYNTLEKTETA 295
>gb|CF330865.1|CF330865 NACL--06-M04.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--06-M04, mRNA sequence
Length = 509
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 75 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 254
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 255 LNYNTLEKTETA 290
>gb|CF338295.1|CF338295 RCL1--01-D20.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-D20, mRNA sequence
Length = 495
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 82 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 261
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 262 LNYNTLEKTETA 297
>gb|CF338402.1|CF338402 RCL1--01-J04.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-J04, mRNA sequence
Length = 579
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 130 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 309
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 310 LNYNTLEKTETA 345
>gb|CF338721.1|CF338721 RCL1--02-J06.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--02-J06, mRNA sequence
Length = 531
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 82 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 261
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 262 LNYNTLEKTETA 297
>gb|CF338999.1|CF338999 RCL1--03-H14.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--03-H14, mRNA sequence
Length = 531
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 82 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 261
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 262 LNYNTLEKTETA 297
>gb|CF340484.1|CF340484 RCL1--08-C19.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--08-C19, mRNA sequence
Length = 499
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 88 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 267
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 268 LNYNTLEKTETA 303
>gb|CV724065.1|CV724065 root--05-L05.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--05-L05, mRNA sequence
Length = 483
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 61 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 240
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 241 LNYNTLEKTETA 276
>gb|CV727149.1|CV727149 14Salt--05-C13.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--05-C13, mRNA sequence
Length = 526
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 103 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 282
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 283 LNYNTLEKTETA 318
>gb|CV729634.1|CV729634 FLO--02-L11.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-L11,
mRNA sequence
Length = 505
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 96 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 275
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 276 LNYNTLEKTETA 311
>gb|CV729635.1|CV729635 FLO--02-L11.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-L11,
mRNA sequence
Length = 484
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / -2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 459 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 280
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 279 LNYNTLEKTETA 244
>gb|CV732315.1|CV732315 FLO--06-L21.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-L21,
mRNA sequence
Length = 483
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 83 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 262
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 263 LNYNTLEKTETA 298
>dbj|AK062318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-C06, full
insert sequence
Length = 550
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 92 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 271
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 272 LNYNTLEKTETA 307
>dbj|AK103639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F19, full
insert sequence
Length = 535
Score = 168 bits (361), Expect = 6e-040
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 90 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 269
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 270 LNYNTLEKTETA 305
>gb|CF281217.1|CF281217 14ETL--08-C24.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-C24, mRNA sequence
Length = 499
Score = 166 bits (357), Expect = 2e-039
Identities = 65/72 (90%), Positives = 70/72 (97%)
Frame = -3 / -1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEK+
Sbjct: 391 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKI 212
Query: 330 LNYNTLEKTETS 295
+NYNTLEKTET+
Sbjct: 211 INYNTLEKTETA 176
>gb|CV729680.1|CV729680 FLO--02-M21.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-M21,
mRNA sequence
Length = 453
Score = 166 bits (357), Expect = 2e-039
Identities = 66/72 (91%), Positives = 70/72 (97%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDL+LDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 83 EMIIPVRCFTCGKVIGNKWDLFLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 262
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 263 LNYNTLEKTETA 298
>gb|CF291592.1|CF291592 14ROOT--02-B10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-B10, mRNA sequence
Length = 529
Score = 164 bits (353), Expect = 7e-039
Identities = 66/72 (91%), Positives = 69/72 (95%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L YCCRRMLMTHVDLIEKL
Sbjct: 108 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVCYCCRRMLMTHVDLIEKL 287
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 288 LNYNTLEKTETA 323
>gb|CF339489.1|CF339489 RCL1--05-A08.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-A08, mRNA sequence
Length = 329
Score = 164 bits (352), Expect = 1e-038
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEK
Sbjct: 92 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKS 271
Query: 330 LNYNTLEKTETS 295
LNYNTLEKT+T+
Sbjct: 272 LNYNTLEKTDTA 307
>gb|CV724434.1|CV724434 14Salt--01-A05.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-A05, mRNA sequence
Length = 537
Score = 163 bits (351), Expect = 1e-038
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL RYCCR+MLMTHVDLIEKL
Sbjct: 122 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGSVRYCCRQMLMTHVDLIEKL 301
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 302 LNYNTLEKTETA 337
>gb|CV732111.1|CV732111 FLO--06-H02.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-H02,
mRNA sequence
Length = 489
Score = 162 bits (348), Expect = 3e-038
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYL LQADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 82 EMIIPVRCFTCGKVIGNKWDLYLYFLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 261
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 262 LNYNTLEKTETA 297
>gb|CV731417.1|CV731417 FLO--05-H04.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-H04,
mRNA sequence
Length = 463
Score = 159 bits (342), Expect = 2e-037
Identities = 64/72 (88%), Positives = 67/72 (93%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYL L ADY+EGDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 109 EMIIPVRCFTCGKVIGNKWDLYLVLXHADYTEGDALDALGLVRYCCRRMLMTHVDLIEKL 288
Query: 330 LNYNTLEKTETS 295
LNYNTLEKTET+
Sbjct: 289 LNYNTLEKTETA 324
>gb|AU160966.1|AU160966 AU160966 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52967, mRNA sequence
Length = 530
Score = 145 bits (311), Expect(2) = 2e-036
Identities = 58/62 (93%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 480 CGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEKTE 301
CGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLLNYNTLEKTE
Sbjct: 103 CGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTE 282
Query: 300 TS 295
T+
Sbjct: 283 TA 288
Score = 31.3 bits (62), Expect(2) = 2e-036
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIG 463
+MIIPVRCFT G+ +G
Sbjct: 74 EMIIPVRCFTAGR*LG 121
>gb|CA999568.1|CA999568 S345P_C05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 428
Score = 154 bits (331), Expect = 8e-036
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = -3 / +3
Query: 489 CFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLE 310
CFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLLNYNTLE
Sbjct: 3 CFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLE 182
Query: 309 KTETS 295
KTET+
Sbjct: 183 KTETT 197
>gb|AU101331.1|AU101331 AU101331 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10970, mRNA sequence
Length = 540
Score = 143 bits (306), Expect(2) = 8e-036
Identities = 57/62 (91%), Positives = 59/62 (95%)
Frame = -3 / +1
Query: 480 CGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEKTE 301
CGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLLNYNTLEK E
Sbjct: 37 CGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKXE 216
Query: 300 TS 295
T+
Sbjct: 217 TA 222
Score = 31.3 bits (62), Expect(2) = 8e-036
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIG 463
+MIIPVRCFT G+ +G
Sbjct: 8 EMIIPVRCFTAGR*LG 55
>gb|C19813.1|C19813 C19813 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10970_2A, mRNA sequence
Length = 387
Score = 154 bits (330), Expect = 1e-035
Identities = 65/80 (81%), Positives = 68/80 (85%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLYL LLQADY+EGDALDAL L RYCCR ML THVDLIEKL
Sbjct: 78 EMIIPVRCFTCGKVIGNKWDLYLXLLQADYTEGDALDALGLVRYCCRXMLXTHVDLIEKL 257
Query: 330 LNYNTLEKTETS*VSKHIML 271
LNYNTLEK S +S ML
Sbjct: 258 LNYNTLEKDRDSRLS*PSML 317
>gb|CV729529.1|CV729529 FLO--02-H23.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-H23,
mRNA sequence
Length = 480
Score = 151 bits (325), Expect = 5e-035
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = -3 / +3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVRCFTCGKVIGNKWDLY LLQADY+ GDALDAL L RYCCRRMLMTHVDLIEKL
Sbjct: 78 EMIIPVRCFTCGKVIGNKWDLYFFLLQADYT*GDALDALXLVRYCCRRMLMTHVDLIEKL 257
Query: 330 LNYNTLEKTE 301
LNYNTLEK +
Sbjct: 258 LNYNTLEKDQ 287
>gb|D23218.1|D23218 RICC2445A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2445_2A, mRNA sequence
Length = 349
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHV 349
+MIIPVRCFTCGKVIGNKWDLYLDLLQADY+EGDALDAL L RYCCRRMLMTHV
Sbjct: 83 EMIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYCCRRMLMTHV 244
Score = 42.3 bits (86), Expect(2) = 5e-035
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3 / +3
Query: 348 DLIEKLLNYNTLEKTETS 295
DLIEKLLNYNTLEKTET+
Sbjct: 246 DLIEKLLNYNTLEKTETA 299
>gb|CF315360.1|CF315360 HD--04-E02.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-E02, mRNA sequence
Length = 495
Score = 110 bits (234), Expect(2) = 8e-035
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = -3 / +1
Query: 441 DLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEKTETS 295
DLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLLNYNTLEKTET+
Sbjct: 148 DLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETA 294
Score = 61.1 bits (127), Expect(2) = 8e-035
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -3 / +2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYL 442
+MIIPVRCFTCGKVIGNKWDLYL
Sbjct: 80 EMIIPVRCFTCGKVIGNKWDLYL 148
>gb|CF315361.1|CF315361 HD--04-E02.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-E02, mRNA sequence
Length = 439
Score = 110 bits (234), Expect(2) = 8e-035
Identities = 45/49 (91%), Positives = 47/49 (95%)
Frame = -3 / -2
Query: 441 DLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEKTETS 295
DLLQADY+EGDALDAL L RYCCRRMLMTHVDLIEKLLNYNTLEKTET+
Sbjct: 348 DLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETA 202
Score = 61.1 bits (127), Expect(2) = 8e-035
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -3 / -3
Query: 510 KMIIPVRCFTCGKVIGNKWDLYL 442
+MIIPVRCFTCGKVIGNKWDLYL
Sbjct: 416 EMIIPVRCFTCGKVIGNKWDLYL 348
>gb|CF279664.1|CF279664 14ETL--06-A19.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-A19, mRNA sequence
Length = 480
Score = 92.7 bits (196), Expect(2) = 4e-033
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3 / +1
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALEL 388
+MIIPVRCFTCGKVIGNKWDLYLDLLQA Y+EGDALDAL L
Sbjct: 70 EMIIPVRCFTCGKVIGNKWDLYLDLLQAVYTEGDALDALGL 192
Score = 72.5 bits (152), Expect(2) = 4e-033
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -3 / +3
Query: 381 YCCRRMLMTHVDLIEKLLNYNTLEKTETS 295
YCCRRMLMTHVDLIEKLLNYNTLEKTET+
Sbjct: 198 YCCRRMLMTHVDLIEKLLNYNTLEKTETA 284
>gb|CV724435.1|CV724435 14Salt--01-A05.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-A05, mRNA sequence
Length = 424
Score = 131 bits (281), Expect = 6e-029
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -3 / -3
Query: 471 VIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEKTETS 295
VIGNKWDLYLDLLQADY+EGDALDAL RYCCR+MLMTHVDLIEKLLNYNTLEKTET+
Sbjct: 422 VIGNKWDLYLDLLQADYTEGDALDALGSVRYCCRQMLMTHVDLIEKLLNYNTLEKTETA 246
>gb|CF282463.1|CF282463 14ETL--09-P23.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-P23, mRNA sequence
Length = 451
Score = 127 bits (271), Expect = 1e-027
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = -3 / -2
Query: 510 KMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKL 331
+MIIPVR FT GKVIG+KWDLY+D LQ +YSEGD LDAL L RYC RRM++THVDLIEKL
Sbjct: 411 EMIIPVR*FTWGKVIGDKWDLYVDFLQGEYSEGDGLDALGLVRYCRRRMVITHVDLIEKL 232
Query: 330 LNYNTLEKTETS 295
+ Y+T+EK E++
Sbjct: 231 VKYDTVEKAESA 196
>gb|AACV01022522.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022522, whole
genome shotgun sequence
Length = 10333
Score = 72.5 bits (152), Expect(3) = 8e-024
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = -3 / +1
Query: 411 DALDALELFRYCCRRMLMTHVDLIEKLLNYNT 316
DALDAL L RYCCRRMLMTHVDLIEKLLNYN+
Sbjct: 4933 DALDALGLVRYCCRRMLMTHVDLIEKLLNYNS 5028
Score = 45.5 bits (93), Expect(3) = 8e-024
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +2
Query: 474 KVIGNKWDLYLDLLQADYSEG 412
+VIGNK DLYLDLLQADY+EG
Sbjct: 3539 QVIGNKGDLYLDLLQADYTEG 3601
Score = 43.7 bits (89), Expect(3) = 8e-024
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = -3 / +2
Query: 552 PPPQLRVPXXXXXAKMIIPVRCFTCGKV 469
P P P AKMIIPVRCFTCGKV
Sbjct: 3314 PNPSPEPPIPAAAAKMIIPVRCFTCGKV 3397
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,592,054,211
Number of Sequences: 438736
Number of extensions: 46759180
Number of successful extensions: 208625
Number of sequences better than 1.0e-020: 62
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 130755832848
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)