TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419417.2.5
(733 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB642724.1|CB642724 OSJNEb03A24.r OSJNEb Oryza sativa (j... 259 2e-067
gb|CB673496.1|CB673496 OSJNEe08A17.r OSJNEe Oryza sativa (j... 259 2e-067
gb|AY129294.1| Oryza sativa (japonica cultivar-group) beta-... 259 2e-067
dbj|AK119546.1| Oryza sativa (japonica cultivar-group) cDNA... 259 2e-067
gb|CB642882.1|CB642882 OSJNEb03E17.r OSJNEb Oryza sativa (j... 257 1e-066
gb|AACV01006096.1| Oryza sativa (japonica cultivar-group) c... 142 2e-055
gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbar... 142 2e-053
dbj|AK071372.1| Oryza sativa (japonica cultivar-group) cDNA... 209 4e-052
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 142 3e-051
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 142 1e-049
dbj|AK068614.1| Oryza sativa (japonica cultivar-group) cDNA... 193 1e-047
dbj|AK120488.1| Oryza sativa (japonica cultivar-group) cDNA... 193 1e-047
ref|NM_195684.1| Oryza sativa (japonica cultivar-group) put... 147 2e-042
gb|AU070534.1|AU070534 AU070534 Rice shoot Oryza sativa (ja... 171 8e-041
gb|AACV01021195.1| Oryza sativa (japonica cultivar-group) c... 100 6e-040
dbj|AG206668.1| Oryza sativa (japonica cultivar-group) DNA,... 98 1e-039
gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, N... 100 4e-038
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 100 2e-036
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 100 4e-036
ref|XM_472852.1| Oryza sativa (japonica cultivar-group), p... 109 8e-036
ref|XM_472853.1| Oryza sativa (japonica cultivar-group), p... 102 8e-036
dbj|AK100820.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-036
dbj|AK062776.1| Oryza sativa (japonica cultivar-group) cDNA... 102 8e-036
gb|CF318496.1|CF318496 HD--08-K07.g1 OsHDAC1-overexpressing... 102 8e-036
gb|CV723046.1|CV723046 root--02-F13.g1 Rice root lambda pha... 101 1e-035
gb|AACV01014816.1| Oryza sativa (japonica cultivar-group) c... 109 2e-035
ref|NM_190276.1| Oryza sativa (japonica cultivar-group), p... 99 5e-035
gb|CV723024.1|CV723024 root--02-E13.g1 Rice root lambda pha... 102 7e-035
dbj|AK070962.1| Oryza sativa (japonica cultivar-group) cDNA... 99 1e-034
ref|XM_472855.1| Oryza sativa (japonica cultivar-group), p... 99 1e-034
gb|CB647183.1|CB647183 OSJNEb10A03.r OSJNEb Oryza sativa (j... 99 1e-034
gb|CB675343.1|CB675343 OSJNEe11A17.r OSJNEe Oryza sativa (j... 99 2e-034
dbj|AG205619.1| Oryza sativa (japonica cultivar-group) DNA,... 100 3e-034
dbj|AP003766.3| Oryza sativa (japonica cultivar-group) geno... 109 3e-034
gb|CF276515.1|CF276515 14ETL--01-L03.g1 Rice etiolated leaf... 96 6e-034
dbj|AK065793.1| Oryza sativa (japonica cultivar-group) cDNA... 103 1e-033
dbj|AK062029.1| Oryza sativa (japonica cultivar-group) cDNA... 103 1e-033
ref|XM_472851.1| Oryza sativa (japonica cultivar-group), p... 103 1e-033
gb|CB651199.1|CB651199 OSJNEb16B05.r OSJNEb Oryza sativa (j... 103 1e-033
gb|CB672844.1|CB672844 OSJNEe07B16.r OSJNEe Oryza sativa (j... 103 1e-033
dbj|AG022668.1| Oryza sativa (japonica cultivar-group) DNA,... 99 1e-033
dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-033
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 142 4e-032
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 142 4e-032
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 142 4e-032
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 109 3e-031
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 109 1e-030
gb|C98907.1|C98907 C98907 Rice panicle at flowering stage O... 99 2e-029
gb|AACV01009972.1| Oryza sativa (japonica cultivar-group) c... 102 5e-029
gb|AACV01010847.1| Oryza sativa (japonica cultivar-group) c... 108 1e-028
emb|AL606591.1|OSJN00030 Oryza sativa (japonica cultivar-gr... 108 1e-028
emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromoso... 108 1e-028
gb|AACV01009973.1| Oryza sativa (japonica cultivar-group) c... 100 5e-027
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 108 2e-026
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 108 2e-026
dbj|AG206166.1| Oryza sativa (japonica cultivar-group) DNA,... 108 2e-026
gb|CF309590.1|CF309590 ABF--03-N08.g1 ABF3-overexpressing t... 103 3e-026
dbj|AG024208.1| Oryza sativa (japonica cultivar-group) DNA,... 108 4e-026
gb|AACV01002847.1| Oryza sativa (japonica cultivar-group) c... 99 6e-026
dbj|AP003349.4| Oryza sativa (japonica cultivar-group) geno... 99 1e-025
dbj|AP003418.2| Oryza sativa (japonica cultivar-group) geno... 99 1e-025
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 104 3e-025
gb|AACV01009971.1| Oryza sativa (japonica cultivar-group) c... 104 1e-024
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 99 5e-024
ref|XM_473162.1| Oryza sativa (japonica cultivar-group), p... 77 8e-024
dbj|AK058333.1| Oryza sativa (japonica cultivar-group) cDNA... 77 8e-024
ref|XM_483281.1| Oryza sativa (japonica cultivar-group), mRNA 66 4e-023
gb|CB656203.1|CB656203 OSJNEc10E08.r OSJNEc Oryza sativa (j... 66 4e-023
dbj|AK067841.1| Oryza sativa (japonica cultivar-group) cDNA... 69 5e-023
ref|XM_473157.1| Oryza sativa (japonica cultivar-group), p... 69 5e-023
dbj|AK067231.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-022
dbj|AK120430.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-022
ref|XM_483282.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-022
ref|XM_507288.1| PREDICTED Oryza sativa (japonica cultivar-... 64 2e-022
gb|AZ134473.1|AZ134473 OSJNBb0112G14f CUGI Rice BAC Library... 85 3e-022
dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-022
ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA 66 4e-022
dbj|AK067001.1| Oryza sativa (japonica cultivar-group) cDNA... 62 4e-022
dbj|AK068499.1| Oryza sativa (japonica cultivar-group) cDNA... 73 4e-022
dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-022
dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA... 66 4e-022
gb|CA999014.1|CA999014 S234M_B11 Rice cold stress germinati... 109 4e-022
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 109 4e-022
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 109 4e-022
gb|CB660688.1|CB660688 OSJNEd02K23.r OSJNEd Oryza sativa (j... 73 4e-022
gb|CB661845.1|CB661845 OSJNEd05D15.r OSJNEd Oryza sativa (j... 73 4e-022
gb|CB647043.1|CB647043 OSJNEb09M19.r OSJNEb Oryza sativa (j... 73 4e-022
gb|CA998261.1|CA998261 S234E_C12 Rice cold stress germinati... 66 4e-022
gb|CF304479.1|CF304479 ABF1--05-B14.g1 ABF3-overexpressing ... 66 5e-022
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 108 6e-022
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 108 6e-022
gb|CB670853.1|CB670853 OSJNEe04C10.r OSJNEe Oryza sativa (j... 71 2e-021
gb|CA999016.1|CA999016 S234M_B12 Rice cold stress germinati... 107 2e-021
dbj|AK069177.1| Oryza sativa (japonica cultivar-group) cDNA... 69 2e-021
ref|NM_193731.1| Oryza sativa (japonica cultivar-group), p... 69 2e-021
dbj|AK060988.1| Oryza sativa (japonica cultivar-group) cDNA... 69 2e-021
gb|AACV01013747.1| Oryza sativa (japonica cultivar-group) c... 96 2e-021
dbj|AP003543.3| Oryza sativa (japonica cultivar-group) geno... 96 7e-021
>gb|CB642724.1|CB642724 OSJNEb03A24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03A24 3', mRNA sequence
Length = 664
Score = 259 bits (561), Expect = 2e-067
Identities = 101/114 (88%), Positives = 106/114 (92%)
Frame = +2 / -2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 570 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 391
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
GCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 390 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 229
Score = 159 bits (342), Expect = 3e-037
Identities = 68/113 (60%), Positives = 77/113 (68%)
Frame = +1 / -1
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHKXX 183
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 571 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQGG 392
Query: 184 XXXXXXXXXXXXXXQLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 391 RVRRTWVLRVVSAGQLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 233
Score = 105 bits (223), Expect(2) = 9e-037
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = -2 / +2
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS MEAA
Sbjct: 239 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSSLMEAA 412
Score = 73.0 bits (153), Expect(2) = 9e-037
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +1
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 463 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 570
Score = 55.6 bits (115), Expect(4) = 3e-027
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -2 / +2
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RAS ME+ GLL SSIPFSVM T GLLY SLT*FI L
Sbjct: 461 RASLMEMNGLLLSSIPFSVMYTGGLLYLSLT*FIRLL 571
Score = 44.1 bits (90), Expect(4) = 3e-027
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3 / +3
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRARI R R P PSC
Sbjct: 285 YPCSPRSRARISRSIRPPTPSC 350
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 352 SAGAQQGLEPLDRVLGVPLEVIL 284
S+G Q+GLEPL RVLGV LEVIL
Sbjct: 223 SSGLQEGLEPLHRVLGVSLEVIL 291
Score = 39.6 bits (80), Expect(4) = 3e-027
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / +1
Query: 223 QQRPREVPTHVTPVLLYGGS 164
QQRPREVPT+V PVLL G S
Sbjct: 352 QQRPREVPTYVAPVLLDGSS 411
>gb|CB673496.1|CB673496 OSJNEe08A17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08A17 3', mRNA sequence
Length = 790
Score = 259 bits (561), Expect = 2e-067
Identities = 101/114 (88%), Positives = 106/114 (92%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 719 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 540
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
GCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 539 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 378
Score = 159 bits (342), Expect = 3e-037
Identities = 68/113 (60%), Positives = 77/113 (68%)
Frame = +1 / -2
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHKXX 183
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 720 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQGG 541
Query: 184 XXXXXXXXXXXXXXQLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 540 RVRRTWVLRVVSAGQLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 382
Score = 105 bits (223), Expect(2) = 9e-037
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = -2 / +1
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS MEAA
Sbjct: 388 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSSLMEAA 561
Score = 73.0 bits (153), Expect(2) = 9e-037
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +3
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 612 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 719
Score = 55.6 bits (115), Expect(4) = 3e-027
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -2 / +1
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RAS ME+ GLL SSIPFSVM T GLLY SLT*FI L
Sbjct: 610 RASLMEMNGLLLSSIPFSVMYTGGLLYLSLT*FIRLL 720
Score = 44.1 bits (90), Expect(4) = 3e-027
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3 / +2
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRARI R R P PSC
Sbjct: 434 YPCSPRSRARISRSIRPPTPSC 499
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 352 SAGAQQGLEPLDRVLGVPLEVIL 284
S+G Q+GLEPL RVLGV LEVIL
Sbjct: 372 SSGLQEGLEPLHRVLGVSLEVIL 440
Score = 39.6 bits (80), Expect(4) = 3e-027
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 223 QQRPREVPTHVTPVLLYGGS 164
QQRPREVPT+V PVLL G S
Sbjct: 501 QQRPREVPTYVAPVLLDGSS 560
>gb|AY129294.1| Oryza sativa (japonica cultivar-group) beta-glucosidase mRNA,
complete cds
Length = 2032
Score = 259 bits (561), Expect = 2e-067
Identities = 101/114 (88%), Positives = 106/114 (92%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 1363 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 1542
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
GCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 1543 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 1704
Score = 159 bits (342), Expect = 3e-037
Identities = 68/113 (60%), Positives = 77/113 (68%)
Frame = +1 / +3
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHKXX 183
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 1362 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQGG 1541
Query: 184 XXXXXXXXXXXXXXQLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 1542 RVRRTWVLRVVSAGQLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 1700
Score = 105 bits (223), Expect(2) = 8e-037
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = -2 / -3
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS MEAA
Sbjct: 1694 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSSLMEAA 1521
Score = 73.0 bits (153), Expect(2) = 8e-037
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / -2
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 1470 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 1363
Score = 55.6 bits (115), Expect(4) = 3e-027
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -2 / -3
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RAS ME+ GLL SSIPFSVM T GLLY SLT*FI L
Sbjct: 1472 RASLMEMNGLLLSSIPFSVMYTGGLLYLSLT*FIRLL 1362
Score = 44.1 bits (90), Expect(4) = 3e-027
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3 / -1
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRARI R R P PSC
Sbjct: 1648 YPCSPRSRARISRSIRPPTPSC 1583
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 352 SAGAQQGLEPLDRVLGVPLEVIL 284
S+G Q+GLEPL RVLGV LEVIL
Sbjct: 1710 SSGLQEGLEPLHRVLGVSLEVIL 1642
Score = 39.6 bits (80), Expect(4) = 3e-027
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 223 QQRPREVPTHVTPVLLYGGS 164
QQRPREVPT+V PVLL G S
Sbjct: 1581 QQRPREVPTYVAPVLLDGSS 1522
>dbj|AK119546.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A05, full
insert sequence
Length = 1828
Score = 259 bits (561), Expect = 2e-067
Identities = 101/114 (88%), Positives = 106/114 (92%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 1281 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 1460
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
GCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 1461 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 1622
Score = 159 bits (342), Expect = 3e-037
Identities = 68/113 (60%), Positives = 77/113 (68%)
Frame = +1 / +2
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHKXX 183
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 1280 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQGG 1459
Query: 184 XXXXXXXXXXXXXXQLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 1460 RVRRTWVLRVVSAGQLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 1618
Score = 105 bits (223), Expect(2) = 8e-037
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = -2 / -1
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS MEAA
Sbjct: 1612 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSSLMEAA 1439
Score = 73.0 bits (153), Expect(2) = 8e-037
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / -3
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 1388 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 1281
Score = 55.6 bits (115), Expect(4) = 3e-027
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -2 / -1
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RAS ME+ GLL SSIPFSVM T GLLY SLT*FI L
Sbjct: 1390 RASLMEMNGLLLSSIPFSVMYTGGLLYLSLT*FIRLL 1280
Score = 44.1 bits (90), Expect(4) = 3e-027
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3 / -2
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRARI R R P PSC
Sbjct: 1566 YPCSPRSRARISRSIRPPTPSC 1501
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 352 SAGAQQGLEPLDRVLGVPLEVIL 284
S+G Q+GLEPL RVLGV LEVIL
Sbjct: 1628 SSGLQEGLEPLHRVLGVSLEVIL 1560
Score = 39.6 bits (80), Expect(4) = 3e-027
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 223 QQRPREVPTHVTPVLLYGGS 164
QQRPREVPT+V PVLL G S
Sbjct: 1499 QQRPREVPTYVAPVLLDGSS 1440
>gb|CB642882.1|CB642882 OSJNEb03E17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03E17 3', mRNA sequence
Length = 763
Score = 257 bits (555), Expect = 1e-066
Identities = 100/114 (87%), Positives = 105/114 (92%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 622 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 443
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
GCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKD LKRYPKNSVQWFK LL +
Sbjct: 442 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDTLKRYPKNSVQWFKALLKT 281
Score = 157 bits (337), Expect = 1e-036
Identities = 67/113 (59%), Positives = 76/113 (67%)
Frame = +1 / -3
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHKXX 183
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 623 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQGG 444
Query: 184 XXXXXXXXXXXXXXQLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG PQE+PQELG VVQ P E
Sbjct: 443 RVRRTWVLRVVSAGQLGVGGRILLEIRALLRGLQGYPQEIPQELGAVVQGPPE 285
Score = 105 bits (223), Expect(2) = 9e-037
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = -2 / +3
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS MEAA
Sbjct: 291 RALNHCTEFLGYLLRVSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSSLMEAA 464
Score = 73.0 bits (153), Expect(2) = 9e-037
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 515 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 622
Score = 55.6 bits (115), Expect(4) = 2e-026
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -2 / +3
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RAS ME+ GLL SSIPFSVM T GLLY SLT*FI L
Sbjct: 513 RASLMEMNGLLLSSIPFSVMYTGGLLYLSLT*FIRLL 623
Score = 44.1 bits (90), Expect(4) = 2e-026
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = -3 / +1
Query: 290 YPCSPRSRARIWRCTRRPIPSC 225
YPCSPRSRARI R R P PSC
Sbjct: 337 YPCSPRSRARISRSIRPPTPSC 402
Score = 39.6 bits (80), Expect(4) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 223 QQRPREVPTHVTPVLLYGGS 164
QQRPREVPT+V PVLL G S
Sbjct: 404 QQRPREVPTYVAPVLLDGSS 463
Score = 38.6 bits (78), Expect(4) = 2e-026
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / +2
Query: 352 SAGAQQGLEPLDRVLGVPLEVIL 284
S+G Q+GLEPL RVLGV LE IL
Sbjct: 275 SSGLQEGLEPLHRVLGVSLEGIL 343
>gb|AACV01006096.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006096, whole
genome shotgun sequence
Length = 15111
Score = 142 bits (305), Expect(3) = 2e-055
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 9937 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 9767
Score = 96.8 bits (205), Expect(3) = 2e-026
Identities = 42/53 (79%), Positives = 42/53 (79%)
Frame = -2 / +3
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS
Sbjct: 9777 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSS 9935
Score = 76.7 bits (161), Expect(3) = 2e-055
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2 / -1
Query: 62 ENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++GMDD N+PF SI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 10185 DSGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 10069
Score = 70.7 bits (148), Expect(4) = 7e-028
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1 / -2
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 9887 QLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 9771
Score = 65.2 bits (136), Expect(4) = 7e-028
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1 / -3
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 10177 DG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQ 10070
Score = 51.5 bits (106), Expect(3) = 2e-055
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVKERYNSP VYITENG
Sbjct: 10350 RSLMNYVKERYNSPPVYITENG 10285
Score = 42.8 bits (87), Expect(3) = 2e-026
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 67 IFSDVNRWAIVPLLDIVHQLP 5
+FSDV+ WA+VP LDIVHQ P
Sbjct: 10288 VFSDVHWWAVVPFLDIVHQAP 10350
Score = 37.3 bits (75), Expect(4) = 7e-028
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1 / -3
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
+E DELCQG VQ P +HH*K
Sbjct: 10351 EEPDELCQGKVQQPTSVHH*K 10289
Score = 33.1 bits (66), Expect(3) = 2e-026
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 112 GVLDGGERAVAVVHP 68
GVLDG ER VAV+HP
Sbjct: 10135 GVLDGNERVVAVIHP 10179
Score = 26.3 bits (51), Expect(4) = 7e-028
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 192 TCVGTSRGRCW 224
T VGTSRG CW
Sbjct: 9921 TYVGTSRGLCW 9889
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAa0021B21, from chromosome 3, complete sequence
Length = 139208
Score = 142 bits (305), Expect(3) = 2e-053
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 73897 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 73727
Score = 96.8 bits (205), Expect(3) = 1e-024
Identities = 42/53 (79%), Positives = 42/53 (79%)
Frame = -2 / +3
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS
Sbjct: 73737 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSS 73895
Score = 76.7 bits (161), Expect(3) = 2e-053
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2 / -3
Query: 62 ENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++GMDD N+PF SI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 74145 DSGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 74029
Score = 70.7 bits (148), Expect(3) = 1e-024
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1 / -1
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 73847 QLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 73731
Score = 65.2 bits (136), Expect(3) = 1e-024
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1 / -2
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 74137 DG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQ 74030
Score = 51.5 bits (106), Expect(3) = 2e-053
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVKERYNSP VYITENG
Sbjct: 74310 RSLMNYVKERYNSPPVYITENG 74245
Score = 42.8 bits (87), Expect(3) = 1e-024
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 67 IFSDVNRWAIVPLLDIVHQLP 5
+FSDV+ WA+VP LDIVHQ P
Sbjct: 74248 VFSDVHWWAVVPFLDIVHQAP 74310
Score = 37.3 bits (75), Expect(3) = 1e-024
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
+E DELCQG VQ P +HH*K
Sbjct: 74311 EEPDELCQGKVQQPTSVHH*K 74249
Score = 33.1 bits (66), Expect(3) = 1e-024
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 112 GVLDGGERAVAVVHP 68
GVLDG ER VAV+HP
Sbjct: 74095 GVLDGNERVVAVIHP 74139
>dbj|AK071372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094F17, full
insert sequence
Length = 1842
Score = 209 bits (450), Expect = 4e-052
Identities = 84/116 (72%), Positives = 95/116 (81%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVK+RYN PTVYITENGMDDGNSPF S+++ALKD KR KYHN YL N+A SI+ED
Sbjct: 1228 RILMNYVKDRYNKPTVYITENGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIRED 1407
Query: 185 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
GCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 1408 GCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 1575
Score = 73.5 bits (154), Expect(3) = 3e-027
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -2 / -2
Query: 267 SPNLEVYPAAHSQLSSNDHAKYPRTSHPSSFMEAA 163
+PNLEVYPAAHSQLS DHAKYPRTS PSS ME+A
Sbjct: 1490 NPNLEVYPAAHSQLSRRDHAKYPRTSQPSSLMESA 1386
Score = 72.1 bits (151), Expect(3) = 3e-023
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1 / +3
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
++ DELCQG +Q N LH+ +W+G QQP HL PQG+QEDQ+PQ L + LHK
Sbjct: 1227 EDLDELCQGQIQQTNCLHNREWNG*WQQPLHLSEECPQGRQEDQIPQ*LSYKLSRLHK 1400
Score = 64.3 bits (134), Expect(3) = 3e-027
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = -2 / -2
Query: 114 RASWMEVKGLLPSSIPFSVM*TVGLLYRSLT*FISFL 4
RA + E+KGLLPSSIPFSVM*TVGLLY SLT*FI L
Sbjct: 1337 RAFFREMKGLLPSSIPFSVM*TVGLLYLSLT*FIKIL 1227
Score = 44.6 bits (91), Expect(3) = 3e-023
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +2 / +1
Query: 290 NLKRYPKNSVQWFKTLLSSS 349
N KRYPKNSVQWFK LL+SS
Sbjct: 1510 NRKRYPKNSVQWFKNLLASS 1569
Score = 33.6 bits (67), Expect(3) = 3e-023
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 226 QLGMGRRVHLQIRALLRGLQ 285
QLG+GR +HL+IR +LR LQ
Sbjct: 1449 QLGVGRWIHLEIRIILRRLQ 1508
Score = 25.8 bits (50), Expect(3) = 3e-027
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 345 ELSRVLNHWTEFLGY 301
+ R LNH TEF GY
Sbjct: 1565 DAKRFLNHCTEFFGY 1521
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 142 bits (305), Expect(3) = 3e-051
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 1008613 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 1008443
Score = 96.8 bits (205), Expect(3) = 2e-022
Identities = 42/53 (79%), Positives = 42/53 (79%)
Frame = -2 / +3
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS
Sbjct: 1008453 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSS 1008611
Score = 76.7 bits (161), Expect(3) = 3e-051
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2 / -3
Query: 62 ENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++GMDD N+PF SI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 1008861 DSGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 1008745
Score = 70.7 bits (148), Expect(3) = 2e-022
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1 / -1
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 1008563 QLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 1008447
Score = 65.2 bits (136), Expect(3) = 2e-022
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1 / -2
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 1008853 DG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQ 1008746
Score = 51.5 bits (106), Expect(3) = 3e-051
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVKERYNSP VYITENG
Sbjct: 1009026 RSLMNYVKERYNSPPVYITENG 1008961
Score = 42.8 bits (87), Expect(3) = 2e-022
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 67 IFSDVNRWAIVPLLDIVHQLP 5
+FSDV+ WA+VP LDIVHQ P
Sbjct: 1008964 VFSDVHWWAVVPFLDIVHQAP 1009026
Score = 37.3 bits (75), Expect(3) = 2e-022
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
+E DELCQG VQ P +HH*K
Sbjct: 1009027 EEPDELCQGKVQQPTSVHH*K 1008965
Score = 33.1 bits (66), Expect(3) = 2e-022
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +1
Query: 112 GVLDGGERAVAVVHP 68
GVLDG ER VAV+HP
Sbjct: 1008811 GVLDGNERVVAVIHP 1008855
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 142 bits (305), Expect(3) = 1e-049
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 5879163 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 5878993
Score = 96.8 bits (205), Expect(3) = 1e-020
Identities = 42/53 (79%), Positives = 42/53 (79%)
Frame = -2 / +2
Query: 336 RVLNHWTEFLGYXXXXXXXSTK*SPNLEVYPAAHSQLSSNDHAKYPRTSHPSS 178
R LNH TEFLGY STK*SPNLE YPAAHSQLSS DHAKYPRTSHPSS
Sbjct: 5879003 RALNHCTEFLGYLLRLSL*STK*SPNLEEYPAAHSQLSSRDHAKYPRTSHPSS 5879161
Score = 76.7 bits (161), Expect(3) = 1e-049
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2 / -2
Query: 62 ENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
++GMDD N+PF SI+DALKDSKRIKYHN YL N+AASIK
Sbjct: 5879411 DSGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIK 5879295
Score = 70.7 bits (148), Expect(3) = 7e-021
Identities = 30/39 (76%), Positives = 34/39 (87%)
Frame = +1 / -3
Query: 226 QLGMGRRVHLQIRALLRGLQG*PQEVPQELGPVVQDPAE 342
QLG+G R+ L+IRALLRGLQG*PQE+PQELG VVQ P E
Sbjct: 5879113 QLGVGGRILLEIRALLRGLQG*PQEIPQELGAVVQGPPE 5878997
Score = 65.2 bits (136), Expect(3) = 7e-021
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1 / -1
Query: 70 DGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 5879403 DG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQ 5879296
Score = 51.5 bits (106), Expect(3) = 1e-049
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2 / -2
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVKERYNSP VYITENG
Sbjct: 5879576 RSLMNYVKERYNSPPVYITENG 5879511
Score = 42.8 bits (87), Expect(3) = 1e-020
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 67 IFSDVNRWAIVPLLDIVHQLP 5
+FSDV+ WA+VP LDIVHQ P
Sbjct: 5879514 VFSDVHWWAVVPFLDIVHQAP 5879576
Score = 37.3 bits (75), Expect(3) = 7e-021
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1 / -1
Query: 4 QEADELCQGAVQ*PNGLHH*K 66
+E DELCQG VQ P +HH*K
Sbjct: 5879577 EEPDELCQGKVQQPTSVHH*K 5879515
Score = 33.1 bits (66), Expect(3) = 1e-020
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +3
Query: 112 GVLDGGERAVAVVHP 68
GVLDG ER VAV+HP
Sbjct: 5879361 GVLDGNERVVAVIHP 5879405
>dbj|AK068614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157P14, full
insert sequence
Length = 3151
Score = 193 bits (417), Expect = 1e-047
Identities = 69/112 (61%), Positives = 91/112 (81%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKEDG 187
KLM +VKE+Y +P V ITENGMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+++G
Sbjct: 2594 KLMKHVKEKYGNPPVVITENGMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIRKEG 2773
Query: 188 CDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
C+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 2774 CNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 2929
>dbj|AK120488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H18, full
insert sequence
Length = 3151
Score = 193 bits (417), Expect = 1e-047
Identities = 69/112 (61%), Positives = 91/112 (81%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKEDG 187
KLM +VKE+Y +P V ITENGMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+++G
Sbjct: 2594 KLMKHVKEKYGNPPVVITENGMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIRKEG 2773
Query: 188 CDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
C+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 2774 CNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 2929
>ref|NM_195684.1| Oryza sativa (japonica cultivar-group) putative beta-glucosidase
(OSJNBa0065C16.15), mRNA
Length = 1548
Score = 147 bits (315), Expect(2) = 2e-042
Identities = 59/88 (67%), Positives = 69/88 (78%)
Frame = +2 / +1
Query: 89 PFTSIQDALKDSKRIKYHNGYLNNVAASIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGL 268
PF S+++ALKD KR KYHN YL N+A SI+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGL
Sbjct: 1285 PFISLKNALKDDKRTKYHNDYLTNLADSIREDGCDVRGYFAWSLLDNWEWAAGYTSRFGL 1464
Query: 269 YFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
Y+VDYK+ + + + L SSS*
Sbjct: 1465 YYVDYKNRKRYPKNSVQWFKNLLASSS* 1548
Score = 49.6 bits (102), Expect(2) = 2e-042
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN PTVYITENG
Sbjct: 1186 RILMNYVKDRYNKPTVYITENG 1251
>gb|AU070534.1|AU070534 AU070534 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S2162_7A, mRNA sequence
Length = 389
Score = 171 bits (368), Expect = 8e-041
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
R LMNYVKERYNSP VYITENGMDD N+PF SI+DALKDSKRIKYHN YL N+AASIKED
Sbjct: 162 RSLMNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKED 341
Query: 185 GCDVRGYFAWSLLDNW 232
GCDVRGYFAWSLLDNW
Sbjct: 342 GCDVRGYFAWSLLDNW 389
Score = 98.2 bits (208), Expect(2) = 8e-021
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = +1 / +2
Query: 4 QEADELCQGAVQ*PNGLHH*KWDGRRQQPFHLHPGRPQGQQEDQVPQRLPQQRCCLHK 177
+E DELCQG VQ P +HH*K DG +QQP H H GRPQGQQEDQ+PQ LP Q C H+
Sbjct: 161 EEPDELCQGKVQQPTSVHH*KRDG*QQQPVHFHQGRPQGQQEDQIPQ*LPHQSGCFHQ 334
Score = 73.0 bits (153), Expect(2) = 3e-021
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / -1
Query: 112 GVLDGGERAVAVVHPIFSDVNRWAIVPLLDIVHQLP 5
GVLDG ER VAV+HP+FSDV+ WA+VP LDIVHQ P
Sbjct: 269 GVLDGNERVVAVIHPVFSDVHWWAVVPFLDIVHQAP 162
Score = 52.8 bits (109), Expect(2) = 3e-021
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / -2
Query: 231 QLSSNDHAKYPRTSHPSSFMEAA 163
QLSS DHAKYPRTSHPSS MEAA
Sbjct: 388 QLSSRDHAKYPRTSHPSSLMEAA 320
Score = 26.3 bits (51), Expect(2) = 8e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 192 TCVGTSRGRCW 224
T VGTSRG CW
Sbjct: 349 TYVGTSRGLCW 381
>gb|AACV01021195.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021195, whole
genome shotgun sequence
Length = 17610
Score = 100 bits (214), Expect(3) = 6e-040
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 16366 REDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 16542
Score = 68.4 bits (143), Expect(3) = 6e-040
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 16162 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 16275
Score = 49.6 bits (102), Expect(3) = 6e-040
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN PTVYITENG
Sbjct: 15906 RILMNYVKDRYNKPTVYITENG 15971
>dbj|AG206668.1| Oryza sativa (japonica cultivar-group) DNA, clone:T10058T, 3'
flanking sequence of Tos17 insertion in rice strain
ND5055, genomic survey sequence
Length = 556
Score = 98.2 bits (208), Expect(3) = 1e-039
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKD 289
+EDGCDVRGYFAWSLLDNWEWAAGYT RFGLY+VDYK+
Sbjct: 355 REDGCDVRGYFAWSLLDNWEWAAGYTXRFGLYYVDYKN 468
Score = 68.4 bits (143), Expect(3) = 1e-039
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 151 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 264
Score = 39.1 bits (79), Expect(3) = 1e-039
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 290 NLKRYPKNSVQWFKTLLSSS 349
N KRYPKNSVQW K L+SS
Sbjct: 466 NRKRYPKNSVQWXKNXLASS 525
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0065C16, from Chromosome 10, complete sequence
Length = 146391
Score = 100 bits (214), Expect(3) = 4e-038
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 71409 REDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 71233
Score = 68.4 bits (143), Expect(3) = 4e-038
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / -1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 71613 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 71500
Score = 49.6 bits (102), Expect(3) = 4e-038
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN PTVYITENG
Sbjct: 71869 RILMNYVKDRYNKPTVYITENG 71804
>gb|CH401251.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000088
genomic scaffold, whole genome shotgun sequence
Length = 1117668
Score = 100 bits (214), Expect(3) = 2e-036
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2 / +2
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 549527 REDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 549703
Score = 68.4 bits (143), Expect(3) = 2e-036
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +2
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 549323 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 549436
Score = 49.6 bits (102), Expect(3) = 2e-036
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN PTVYITENG
Sbjct: 549067 RILMNYVKDRYNKPTVYITENG 549132
>ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1671487
Score = 100 bits (214), Expect(3) = 4e-036
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 755260 REDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 755436
Score = 68.4 bits (143), Expect(3) = 4e-036
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 755056 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 755169
Score = 49.6 bits (102), Expect(3) = 4e-036
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R LMNYVK+RYN PTVYITENG
Sbjct: 754800 RILMNYVKDRYNKPTVYITENG 754865
>ref|XM_472852.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1590
Score = 109 bits (232), Expect(2) = 8e-036
Identities = 41/62 (66%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS 349
S DG +V+GYFAWSLLDN+EWA GYT RFG+ FVDY D +KRYPKNS +WFK L S
Sbjct: 1354 SAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKS 1533
Query: 350 *R 355
R
Sbjct: 1534 NR 1539
Score = 65.7 bits (137), Expect(2) = 8e-036
Identities = 23/58 (39%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+++ YVKE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 1195 EMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRD 1368
>ref|XM_472853.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1533
Score = 102 bits (217), Expect(2) = 8e-036
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 1366 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 1524
Score = 72.5 bits (152), Expect(2) = 8e-036
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 1192 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 1368
>dbj|AK100820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122G03, full
insert sequence
Length = 1348
Score = 102 bits (217), Expect(2) = 8e-036
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2 / +3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 1059 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 1217
Score = 72.5 bits (152), Expect(2) = 8e-036
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 885 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 1061
>dbj|AK062776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-A09, full
insert sequence
Length = 735
Score = 102 bits (217), Expect(2) = 8e-036
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 503 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 661
Score = 72.5 bits (152), Expect(2) = 8e-036
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 329 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 505
>gb|CF318496.1|CF318496 HD--08-K07.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--08-K07, mRNA sequence
Length = 556
Score = 102 bits (217), Expect(2) = 8e-036
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 308 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 150
Score = 72.5 bits (152), Expect(2) = 8e-036
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 482 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 306
>gb|CV723046.1|CV723046 root--02-F13.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-F13, mRNA sequence
Length = 452
Score = 101 bits (215), Expect(2) = 1e-035
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 195 DGAHVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 37
Score = 72.5 bits (152), Expect(2) = 1e-035
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 369 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 193
>gb|AACV01014816.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014816, whole
genome shotgun sequence
Length = 44572
Score = 109 bits (232), Expect(3) = 2e-035
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +2 / -3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
+++GC+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 20339 RKEGCNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 20172
Score = 57.0 bits (118), Expect(3) = 2e-035
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2 / -2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+
Sbjct: 20940 GMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIR 20830
Score = 40.0 bits (81), Expect(3) = 2e-035
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / -1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGN 85
KLM +VKE+Y +P V ITENGM G+
Sbjct: 21091 KLMKHVKEKYGNPPVVITENGMLAGD 21014
>ref|NM_190276.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1566
Score = 99.1 bits (210), Expect(2) = 5e-035
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+DG DVRGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S +WF L
Sbjct: 1366 KDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASARWFSRFL 1527
Score = 73.0 bits (153), Expect(2) = 5e-035
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
RKL+NY +RY +P +Y+TENGMD+ + ++ L D+ R+ Y GYL +VA +IK+
Sbjct: 1195 RKLLNYAAKRYGNPVIYVTENGMDEEDDQSATLDQVLNDTTRVGYFKGYLASVAQAIKD 1371
>gb|CV723024.1|CV723024 root--02-E13.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-E13, mRNA sequence
Length = 452
Score = 102 bits (217), Expect(2) = 7e-035
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +2 / -3
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 195 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 37
Score = 69.3 bits (145), Expect(2) = 7e-035
Identities = 26/54 (48%), Positives = 42/54 (77%)
Frame = +2 / -3
Query: 20 YVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 354 YVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 193
>dbj|AK070962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066D17, full
insert sequence
Length = 1853
Score = 99.1 bits (210), Expect(2) = 1e-034
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPK S WFK L
Sbjct: 1378 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEFL 1536
Score = 71.6 bits (150), Expect(2) = 1e-034
Identities = 27/59 (45%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ YVKE Y +PT+YITENG+D+ N+ +Q+ALKD RI Y++ +L ++ ++I++
Sbjct: 1204 RELVLYVKENYGNPTIYITENGVDEFNNKTLPLQEALKDDTRIDYYHKHLLSLLSAIRD 1380
>ref|XM_472855.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1521
Score = 99.1 bits (210), Expect(2) = 1e-034
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / +1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPK S WFK L
Sbjct: 1354 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEFL 1512
Score = 71.6 bits (150), Expect(2) = 1e-034
Identities = 27/59 (45%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ YVKE Y +PT+YITENG+D+ N+ +Q+ALKD RI Y++ +L ++ ++I++
Sbjct: 1180 RELVLYVKENYGNPTIYITENGVDEFNNKTLPLQEALKDDTRIDYYHKHLLSLLSAIRD 1356
>gb|CB647183.1|CB647183 OSJNEb10A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10A03 3', mRNA sequence
Length = 774
Score = 99.1 bits (210), Expect(2) = 1e-034
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPK S WFK L
Sbjct: 282 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEFL 124
Score = 71.6 bits (150), Expect(2) = 1e-034
Identities = 27/59 (45%), Positives = 45/59 (76%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ YVKE Y +PT+YITENG+D+ N+ +Q+ALKD RI Y++ +L ++ ++I++
Sbjct: 456 RELVLYVKENYGNPTIYITENGVDEFNNKTLPLQEALKDDTRIDYYHKHLLSLLSAIRD 280
>gb|CB675343.1|CB675343 OSJNEe11A17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11A17 3', mRNA sequence
Length = 797
Score = 99.1 bits (210), Expect(2) = 2e-034
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPK S WFK L
Sbjct: 431 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGAKRYPKMSAHWFKEFL 273
Score = 70.7 bits (148), Expect(2) = 2e-034
Identities = 27/59 (45%), Positives = 45/59 (76%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ YVKE Y +PT+YITENG+D+ N+ +Q+ALKD RI Y++ +L ++ ++I++
Sbjct: 605 RELVLYVKENYGNPTIYITENGVDEFNNKPLPLQEALKDDTRIDYYHKHLLSLLSAIRD 429
>dbj|AG205619.1| Oryza sativa (japonica cultivar-group) DNA, clone:T05177T, 3'
flanking sequence of Tos17 insertion in rice strain
NC2540, genomic survey sequence
Length = 593
Score = 100 bits (214), Expect(2) = 3e-034
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 259 REDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLASSS* 435
Score = 68.4 bits (143), Expect(2) = 3e-034
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 55 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 168
>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0009H10
Length = 175754
Score = 109 bits (232), Expect(3) = 3e-034
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
+++GC+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 27952 RKEGCNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 28119
Score = 57.0 bits (118), Expect(3) = 3e-034
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2 / +3
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+
Sbjct: 27351 GMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIR 27461
Score = 40.0 bits (81), Expect(3) = 3e-034
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 8 KLMNYVKERYNSPTVYITENGMDDGN 85
KLM +VKE+Y +P V ITENGM G+
Sbjct: 27200 KLMKHVKEKYGNPPVVITENGMLAGD 27277
>gb|CF276515.1|CF276515 14ETL--01-L03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-L03, mRNA sequence
Length = 455
Score = 95.9 bits (203), Expect(2) = 6e-034
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +2 / -1
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EW+ GYT RFG+ FV+Y D K+YPKN WFK L
Sbjct: 269 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVNYNDGRKKYPKNFAHWFKKFL 111
Score = 72.5 bits (152), Expect(2) = 6e-034
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +2 / -1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R L+ YVKE Y +PTVYITENG+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I++
Sbjct: 443 RDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRD 267
>dbj|AK065793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041M21, full
insert sequence
Length = 1976
Score = 103 bits (219), Expect(2) = 1e-033
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
S DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 1526 SAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 1696
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 23/59 (38%), Positives = 45/59 (76%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ ++KE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 1364 RELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRD 1540
>dbj|AK062029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G08, full
insert sequence
Length = 1777
Score = 103 bits (219), Expect(2) = 1e-033
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +3
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
S DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 1479 SAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 1649
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 23/59 (38%), Positives = 45/59 (76%)
Frame = +2 / +3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ ++KE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 1317 RELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRD 1493
>ref|XM_472851.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1602
Score = 103 bits (219), Expect(2) = 1e-033
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / +1
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
S DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 1423 SAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 1593
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 23/59 (38%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ ++KE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 1261 RELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRD 1437
>gb|CB651199.1|CB651199 OSJNEb16B05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16B05 3', mRNA sequence
Length = 780
Score = 103 bits (219), Expect(2) = 1e-033
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -3
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
S DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 505 SAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 335
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 23/59 (38%), Positives = 45/59 (76%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ ++KE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 667 RELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRD 491
>gb|CB672844.1|CB672844 OSJNEe07B16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07B16 3', mRNA sequence
Length = 692
Score = 103 bits (219), Expect(2) = 1e-033
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +2 / -2
Query: 170 SIKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
S DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 478 SAMRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 308
Score = 64.3 bits (134), Expect(2) = 1e-033
Identities = 23/59 (38%), Positives = 45/59 (76%)
Frame = +2 / -2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
R+L+ ++KE Y +PT+YITENG+D+ N+ +++ALKD RI+Y++ +L + +++++
Sbjct: 640 RELLLHIKENYGNPTIYITENGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRD 464
>dbj|AG022668.1| Oryza sativa (japonica cultivar-group) DNA, clone:NC2540_0_401_1A,
3' flanking sequence of Tos17 insertion in rice strain
NC2540, genomic survey sequence
Length = 628
Score = 99.1 bits (210), Expect(2) = 1e-033
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +2 / +1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+EDGCDVRGYFAW LLDNWEWAAGYTSRFGLY+VDYK+ + + + L SSS*
Sbjct: 259 REDGCDVRGYFAWXLLDNWEWAAGYTSRFGLYYVDYKNRKRYPKNSVQWFKNLLXSSS* 435
Score = 68.4 bits (143), Expect(2) = 1e-033
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2 / +1
Query: 65 NGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
+GMDDGNSPF S+++ALKD KR KYHN YL N+A SI+
Sbjct: 55 SGMDDGNSPFISLKNALKDDKRTKYHNDYLTNLADSIR 168
>dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092D04, full
insert sequence
Length = 3403
Score = 103 bits (220), Expect(2) = 2e-033
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = +2 / +2
Query: 182 DGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
DG +V+GYFAWSLLDN+EWA GYT RFGL FVDY D +KR+PKNS WFK L
Sbjct: 3053 DGANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFL 3211
Score = 63.4 bits (132), Expect(2) = 2e-033
Identities = 22/50 (44%), Positives = 39/50 (78%)
Frame = +2 / +2
Query: 5 RKLMNYVKERYNSPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYL 154
R+L+ Y+KE Y +PT++ITENG+D+ N+ +++AL D+ RI+Y++ +L
Sbjct: 2879 RELLLYIKENYGNPTIFITENGVDEVNNKTMPLKEALNDNTRIEYYHKHL 3028
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 142 bits (305), Expect = 4e-032
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 6071525 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 6071355
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 142 bits (305), Expect = 4e-032
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 5844280 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 5844110
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 142 bits (305), Expect = 4e-032
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +2 / -1
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSS 346
+EDGCDVRGYFAWSLLDNWEWAAGY+SRFGLYFVDYKDNLKRYPKNSVQWFK LL +
Sbjct: 5845067 REDGCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 5844897
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 109 bits (232), Expect(3) = 3e-031
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +2 / +3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
+++GC+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 5562531 RKEGCNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 5562698
Score = 57.0 bits (118), Expect(3) = 3e-031
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+
Sbjct: 5561930 GMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIR 5562040
Score = 40.0 bits (81), Expect(3) = 3e-031
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGN 85
KLM +VKE+Y +P V ITENGM G+
Sbjct: 5561779 KLMKHVKEKYGNPPVVITENGMLAGD 5561856
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 109 bits (232), Expect(3) = 1e-030
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +2 / +3
Query: 176 KEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLS 343
+++GC+V GYF WSLLDNWEW +GYT RFGLY++DYK+NL R PK SVQWF +L+
Sbjct: 9503937 RKEGCNVHGYFVWSLLDNWEWNSGYTVRFGLYYIDYKNNLTRIPKASVQWFSQVLA 9504104
Score = 57.0 bits (118), Expect(3) = 1e-030
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2 / +2
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIK 178
GMDD N PF+ ++D L+D KRI+YHN Y++N+ +I+
Sbjct: 9503336 GMDDANHPFSRLEDVLQDDKRIQYHNDYMSNLLDAIR 9503446
Score = 40.0 bits (81), Expect(3) = 1e-030
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 8 KLMNYVKERYNSPTVYITENGMDDGN 85
KLM +VKE+Y +P V ITENGM G+
Sbjct: 9503185 KLMKHVKEKYGNPPVVITENGMLAGD 9503262
>gb|C98907.1|C98907 C98907 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3241_1A, mRNA sequence
Length = 395
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / +1
Query: 179 EDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+DG DVRGYFAWS LDN+EWA GYT RFG+ +VDYK+ L R+PK S +WF L
Sbjct: 139 KDGADVRGYFAWSFLDNFEWAMGYTKRFGIVYVDYKNGLSRHPKASARWFSRFL 300
Score = 54.2 bits (112), Expect(2) = 2e-029
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2 / +1
Query: 41 SPTVYITENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKE 181
+P +Y+TENGMD+ + ++ L D+ R+ Y GYL +VA +IK+
Sbjct: 4 NPVIYVTENGMDEEDDQSATLDQVLNDTTRVGYFKGYLASVAQAIKD 144
>gb|AACV01009972.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009972, whole
genome shotgun sequence
Length = 12357
Score = 102 bits (218), Expect(3) = 5e-029
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2 / -3
Query: 173 IKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+ DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY D KRYPKNS WFK L
Sbjct: 4174 LHRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 4007
Score = 41.8 bits (85), Expect(3) = 5e-029
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R L+ YVKE Y +PTVYITENG
Sbjct: 4594 RDLLLYVKENYGNPTVYITENG 4529
Score = 36.3 bits (73), Expect(3) = 5e-029
Identities = 13/39 (33%), Positives = 28/39 (71%)
Frame = +2 / -1
Query: 68 GMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
G+D+ N+ +Q+ALKD RI+Y++ +L ++ ++I+ +
Sbjct: 4368 GVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRSE 4252
>gb|AACV01010847.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010847, whole
genome shotgun sequence
Length = 28761
Score = 108 bits (231), Expect(3) = 1e-028
Identities = 40/61 (65%), Positives = 47/61 (77%)
Frame = +2 / -2
Query: 173 IKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLLSSS* 352
+ DG +V+GYFAWSLLDN+EWA GYT RFG+ FVDY D +KRYPKNS +WFK L S
Sbjct: 14801 LHRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSN 14622
Query: 353 R 355
R
Sbjct: 14621 R 14619
Score = 102 bits (218), Expect(3) = 2e-026
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = +2 / -1
Query: 173 IKEDGCDVRGYFAWSLLDNWEWAAGYTSRFGLYFVDYKDNLKRYPKNSVQWFKTLL 340
+ DG +V+GYFAWSLLDN+EW+ GYT RFG+ FVDY + +KRYPKNS +WFK L
Sbjct: 7584 LHRDGANVKGYFAWSLLDNFEWSEGYTVRFGINFVDYDNGMKRYPKNSARWFKKFL 7417
Score = 39.6 bits (80), Expect(3) = 2e-026
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2 / -3
Query: 5 RKLMNYVKERYNSPTVYITENG 70
R+L+ ++KE Y +PT+YITENG
Sbjct: 8062 RELLLHIKENYGNPTIYITENG 7997
Score = 39.1 bits (79), Expect(3) = 1e-028
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +2 / -2
Query: 8 KLMNYVKERYNSPTVYITENG 70
+++ YVKE Y +PT+YITENG
Sbjct: 15260 EMLLYVKENYGNPTIYITENG 15198
Score = 34.5 bits (69), Expect(3) = 1e-028
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2 / -1
Query: 59 TENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
T G+D+ N+ +++ALKD RI+Y++ +L + ++++ +
Sbjct: 14997 TSQGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRSE 14872
Score = 32.7 bits (65), Expect(3) = 2e-026
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2 / -3
Query: 59 TENGMDDGNSPFTSIQDALKDSKRIKYHNGYLNNVAASIKED 184
T G+D+ N+ +++ALKD RI+Y++ +L + ++++ +
Sbjct: 7783 TSQGVDEINNKTMRLKEALKDDIRIEYYHKHLLALLSAMRSE 7658
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,607,214,668
Number of Sequences: 438736
Number of extensions: 42279302
Number of successful extensions: 207579
Number of sequences better than 1.0e-020: 122
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 166996170104
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)