TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404725.2.2
(910 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA... 311 9e-083
ref|NM_191079.1| Oryza sativa (japonica cultivar-group), p... 311 9e-083
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 214 8e-078
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 214 8e-078
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 214 8e-078
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 214 9e-078
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 214 9e-078
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 214 9e-078
dbj|AP003411.4| Oryza sativa (japonica cultivar-group) geno... 214 9e-078
gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) c... 214 9e-078
ref|XM_475449.1| Oryza sativa (japonica cultivar-group), p... 294 1e-077
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 220 6e-071
gb|AC118289.2| Oryza sativa (japonica cultivar-group) chrom... 220 6e-071
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 220 5e-070
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 220 2e-055
gb|C73196.1|C73196 C73196 Rice panicle at flowering stage O... 208 9e-052
gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering s... 182 5e-044
ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA 167 1e-039
dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA... 162 4e-038
dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA... 161 1e-037
dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA... 161 1e-037
ref|XM_473496.1| Oryza sativa (japonica cultivar-group), p... 161 1e-037
ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA 154 2e-035
dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA... 152 6e-035
gb|C71978.1|C71978 C71978 Rice panicle at flowering stage O... 138 9e-031
gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (jap... 138 9e-031
ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA 129 4e-028
gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library O... 99 4e-027
dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA... 121 1e-025
ref|XM_549803.1| Oryza sativa (japonica cultivar-group), mRNA 121 1e-025
ref|NM_197271.1| Oryza sativa (japonica cultivar-group) put... 121 2e-025
gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) c... 99 2e-025
gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) c... 98 7e-025
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 99 8e-025
dbj|AP003728.3| Oryza sativa (japonica cultivar-group) geno... 99 1e-024
gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library O... 99 1e-024
dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA... 117 2e-024
ref|NM_185313.2| Oryza sativa (japonica cultivar-group), mRNA 117 2e-024
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 97 6e-024
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 97 7e-024
emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromoso... 97 7e-024
gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) c... 97 7e-024
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 98 2e-023
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 99 3e-023
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 99 6e-023
dbj|AP004262.2| Oryza sativa (japonica cultivar-group) geno... 98 1e-022
gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) c... 98 2e-022
gb|C73552.1|C73552 C73552 Rice panicle at ripening stage Or... 110 2e-022
ref|NM_183431.1| Oryza sativa (japonica cultivar-group), p... 65 3e-022
gb|AQ843693.1|AQ843693 nbxb0024N22r CUGI Rice BAC Library O... 75 1e-021
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 98 1e-021
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 98 9e-021
>dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E13, full
insert sequence
Length = 2451
Score = 311 bits (673), Expect = 9e-083
Identities = 125/169 (73%), Positives = 135/169 (79%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 1328 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 1507
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
I AFFA GMGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++R
Sbjct: 1508 FHINGYAFFAAGMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIR 1687
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SN+WER YLG QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 1688 SNMWERYYLGAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 1834
Score = 247 bits (534), Expect = 1e-063
Identities = 109/170 (64%), Positives = 120/170 (70%)
Frame = +3 / -1
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 1836 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 1657
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPMP AKKA LFSGFSK
Sbjct: 1656 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPMPAAKKA*PLMWKESMLFSGFSK 1477
Query: 738 XTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGV 887
T M RNSA MTLGA G V+ GG PM ALKY L+GV
Sbjct: 1476 TTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPEEALKYSASLSGV 1327
Score = 108 bits (231), Expect(2) = 1e-038
Identities = 54/101 (53%), Positives = 56/101 (55%)
Frame = -2 / +3
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSPSAWGP 661
SS SS PT S SRTPRRAS S S P SP AWG
Sbjct: 1374 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSPPAWGR 1553
Query: 660 ANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 1554 GYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 1676
Score = 108 bits (230), Expect(2) = 4e-042
Identities = 51/96 (53%), Positives = 56/96 (58%)
Frame = +2 / -3
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHADGEKGXXXDXDXXDALLGVLEXHXDEXXELGAD 772
LDRVPAHRVQ+VVR P RP+ PHA GE+G D + DALLGVLE DE ELG D
Sbjct: 1621 LDRVPAHRVQQVVRLPALRRPYPRPHAGGEEGVAVDVEGVDALLGVLEDDLDEGAELGGD 1442
Query: 773 DVGCHLXXXXXXXXXXPDEXXLEXXXAGVEVLXXLD 880
DVG L DE LE GVEVL L+
Sbjct: 1441 DVGRELLRDGGGRRHVADEVVLEHPGGGVEVLGELE 1334
Score = 88.1 bits (186), Expect(2) = 4e-042
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -3
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 1846 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 1682
Score = 75.8 bits (159), Expect(2) = 1e-038
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -3 / +1
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+ +++
Sbjct: 1678 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRIIKQN 1857
>ref|NM_191079.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1662
Score = 311 bits (673), Expect = 9e-083
Identities = 125/169 (73%), Positives = 135/169 (79%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 1144 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 1323
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
I AFFA GMGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++R
Sbjct: 1324 FHINGYAFFAAGMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIR 1503
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SN+WER YLG QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 1504 SNMWERYYLGAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 1650
Score = 247 bits (534), Expect = 1e-063
Identities = 109/170 (64%), Positives = 120/170 (70%)
Frame = +3 / -2
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 1652 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 1473
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSK 737
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPMP AKKA LFSGFSK
Sbjct: 1472 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPMPAAKKA*PLMWKESMLFSGFSK 1293
Query: 738 XTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGV 887
T M RNSA MTLGA G V+ GG PM ALKY L+GV
Sbjct: 1292 TTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPEEALKYSASLSGV 1143
Score = 108 bits (231), Expect(2) = 2e-038
Identities = 54/101 (53%), Positives = 56/101 (55%)
Frame = -2 / +2
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSPSAWGP 661
SS SS PT S SRTPRRAS S S P SP AWG
Sbjct: 1190 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSPPAWGR 1369
Query: 660 ANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 1370 GYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 1492
Score = 108 bits (230), Expect(2) = 4e-042
Identities = 51/96 (53%), Positives = 56/96 (58%)
Frame = +2 / -1
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHADGEKGXXXDXDXXDALLGVLEXHXDEXXELGAD 772
LDRVPAHRVQ+VVR P RP+ PHA GE+G D + DALLGVLE DE ELG D
Sbjct: 1437 LDRVPAHRVQQVVRLPALRRPYPRPHAGGEEGVAVDVEGVDALLGVLEDDLDEGAELGGD 1258
Query: 773 DVGCHLXXXXXXXXXXPDEXXLEXXXAGVEVLXXLD 880
DVG L DE LE GVEVL L+
Sbjct: 1257 DVGRELLRDGGGRRHVADEVVLEHPGGGVEVLGELE 1150
Score = 88.1 bits (186), Expect(2) = 4e-042
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -1
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 1662 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 1498
Score = 75.3 bits (158), Expect(2) = 2e-038
Identities = 33/56 (58%), Positives = 37/56 (66%)
Frame = -3 / +3
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRL 369
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+
Sbjct: 1494 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRI 1661
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 214 bits (461), Expect(2) = 8e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +3
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 34822527 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 34822706
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 34822707 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 34822826
Score = 177 bits (381), Expect = 2e-042
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -3
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 34822828 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 34822649
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 34822648 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34822535
Score = 101 bits (215), Expect(2) = 8e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 34822219 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 34822398
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 34822399 FHINGYAFFAAG 34822434
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 214 bits (461), Expect(2) = 8e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +3
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 34741857 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 34742036
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 34742037 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 34742156
Score = 177 bits (381), Expect = 2e-042
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -3
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 34742158 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 34741979
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 34741978 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34741865
Score = 101 bits (215), Expect(2) = 8e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 34741549 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 34741728
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 34741729 FHINGYAFFAAG 34741764
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 214 bits (461), Expect(2) = 8e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +1
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 34292380 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 34292559
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 34292560 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 34292679
Score = 177 bits (381), Expect = 2e-042
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -2
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 34292681 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 34292502
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 34292501 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 34292388
Score = 101 bits (215), Expect(2) = 8e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 34292072 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 34292251
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 34292252 FHINGYAFFAAG 34292287
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 214 bits (461), Expect(2) = 9e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +2
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 9090659 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 9090838
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 9090839 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 9090958
Score = 177 bits (381), Expect = 2e-042
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -2
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 9090960 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 9090781
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 9090780 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 9090667
Score = 101 bits (215), Expect(2) = 9e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 9090351 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 9090530
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 9090531 FHINGYAFFAAG 9090566
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 214 bits (461), Expect(2) = 9e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +3
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 9269910 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 9270089
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 9270090 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 9270209
Score = 177 bits (381), Expect(2) = 3e-058
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -3
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 9270211 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 9270032
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 9270031 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 9269918
Score = 101 bits (215), Expect(2) = 9e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 9269602 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 9269781
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 9269782 FHINGYAFFAAG 9269817
Score = 88.1 bits (186), Expect(3) = 8e-038
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -2
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 9270221 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 9270057
Score = 80.3 bits (169), Expect(3) = 2e-034
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+AWG GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 9269914 AAWGRGYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 9270051
Score = 75.8 bits (159), Expect(3) = 2e-034
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -3 / +2
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+ +++
Sbjct: 9270053 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRIIKQN 9270232
Score = 73.0 bits (153), Expect(2) = 3e-058
Identities = 36/72 (50%), Positives = 38/72 (52%)
Frame = +3 / -2
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
P AKKA LFSGFSK T M RNSA MTLGA G V+ GG PM
Sbjct: 9269816 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPE 9269637
Query: 852 XALKYXXXLTGV 887
ALKY L+GV
Sbjct: 9269636 EALKYSASLSGV 9269601
Score = 63.8 bits (133), Expect(3) = 8e-038
Identities = 32/68 (47%), Positives = 35/68 (51%)
Frame = +2 / -1
Query: 677 GEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVGCHLXXXXXXXXXXPDEXXLEXXXAG 856
GE+G D + DALLGVLE DE ELG DDVG L DE LE G
Sbjct: 9269811 GEEGVAVDVEGVDALLGVLEDDLDEGAELGGDDVGRELLRDGGGRRHVADEVVLEHPGGG 9269632
Query: 857 VEVLXXLD 880
VEVL L+
Sbjct: 9269631 VEVLGELE 9269608
Score = 47.8 bits (98), Expect(3) = 8e-038
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHA 673
LDRVPAHRVQ+VVR P RP+ PHA
Sbjct: 9269996 LDRVPAHRVQQVVRLPALRRPYPRPHA 9269916
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2 / +2
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSP 676
SS SS PT S SRTPRRAS S S P SP
Sbjct: 9269648 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSP 9269812
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0454H12
Length = 161004
Score = 214 bits (461), Expect(2) = 9e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +3
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 1029 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 1208
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 1209 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 1328
Score = 177 bits (381), Expect(2) = 3e-058
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -3
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 1330 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 1151
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 1150 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 1037
Score = 101 bits (215), Expect(2) = 9e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 721 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 900
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 901 FHINGYAFFAAG 936
Score = 88.1 bits (186), Expect(3) = 9e-038
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -2
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 1340 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 1176
Score = 80.3 bits (169), Expect(3) = 2e-034
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+AWG GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 1033 AAWGRGYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 1170
Score = 75.8 bits (159), Expect(3) = 2e-034
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -3 / +2
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+ +++
Sbjct: 1172 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRIIKQN 1351
Score = 73.0 bits (153), Expect(2) = 3e-058
Identities = 36/72 (50%), Positives = 38/72 (52%)
Frame = +3 / -2
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
P AKKA LFSGFSK T M RNSA MTLGA G V+ GG PM
Sbjct: 935 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPE 756
Query: 852 XALKYXXXLTGV 887
ALKY L+GV
Sbjct: 755 EALKYSASLSGV 720
Score = 63.8 bits (133), Expect(3) = 9e-038
Identities = 32/68 (47%), Positives = 35/68 (51%)
Frame = +2 / -1
Query: 677 GEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVGCHLXXXXXXXXXXPDEXXLEXXXAG 856
GE+G D + DALLGVLE DE ELG DDVG L DE LE G
Sbjct: 930 GEEGVAVDVEGVDALLGVLEDDLDEGAELGGDDVGRELLRDGGGRRHVADEVVLEHPGGG 751
Query: 857 VEVLXXLD 880
VEVL L+
Sbjct: 750 VEVLGELE 727
Score = 47.8 bits (98), Expect(3) = 9e-038
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / -2
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHA 673
LDRVPAHRVQ+VVR P RP+ PHA
Sbjct: 1115 LDRVPAHRVQQVVRLPALRRPYPRPHA 1035
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2 / +2
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSP 676
SS SS PT S SRTPRRAS S S P SP
Sbjct: 767 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSP 931
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1148D12
Length = 132060
Score = 214 bits (461), Expect(2) = 9e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / +1
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 57097 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 57276
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 57277 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 57396
Score = 177 bits (381), Expect(2) = 3e-058
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / -2
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 57398 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 57219
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 57218 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 57105
Score = 101 bits (215), Expect(2) = 9e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 56789 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 56968
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 56969 FHINGYAFFAAG 57004
Score = 88.1 bits (186), Expect(3) = 9e-038
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / -1
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 57408 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 57244
Score = 80.3 bits (169), Expect(3) = 2e-034
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -2 / +2
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+AWG GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 57101 AAWGRGYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 57238
Score = 75.8 bits (159), Expect(3) = 2e-034
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -3 / +3
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+ +++
Sbjct: 57240 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRIIKQN 57419
Score = 73.0 bits (153), Expect(2) = 3e-058
Identities = 36/72 (50%), Positives = 38/72 (52%)
Frame = +3 / -1
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
P AKKA LFSGFSK T M RNSA MTLGA G V+ GG PM
Sbjct: 57003 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPE 56824
Query: 852 XALKYXXXLTGV 887
ALKY L+GV
Sbjct: 56823 EALKYSASLSGV 56788
Score = 63.8 bits (133), Expect(3) = 9e-038
Identities = 32/68 (47%), Positives = 35/68 (51%)
Frame = +2 / -3
Query: 677 GEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVGCHLXXXXXXXXXXPDEXXLEXXXAG 856
GE+G D + DALLGVLE DE ELG DDVG L DE LE G
Sbjct: 56998 GEEGVAVDVEGVDALLGVLEDDLDEGAELGGDDVGRELLRDGGGRRHVADEVVLEHPGGG 56819
Query: 857 VEVLXXLD 880
VEVL L+
Sbjct: 56818 VEVLGELE 56795
Score = 47.8 bits (98), Expect(3) = 9e-038
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHA 673
LDRVPAHRVQ+VVR P RP+ PHA
Sbjct: 57183 LDRVPAHRVQQVVRLPALRRPYPRPHA 57103
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2 / +3
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSP 676
SS SS PT S SRTPRRAS S S P SP
Sbjct: 56835 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSP 56999
>gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002567, whole
genome shotgun sequence
Length = 43694
Score = 214 bits (461), Expect(2) = 9e-078
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = -1 / -1
Query: 679 AVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYL 500
A MGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAGMW++RSN+WER YL
Sbjct: 2756 ACSMGPGIWTPECRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYL 2577
Query: 499 GEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
G QLYVSV+SP RSLRDEYNMPE +LRCGKVVGLPMPPSY
Sbjct: 2576 GAQLYVSVVSPARSLRDEYNMPEIALRCGKVVGLPMPPSY 2457
Score = 177 bits (381), Expect(2) = 3e-058
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +3 / +1
Query: 378 R*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPALSN 557
R*DGGIGRPTTLPQRR +SGMLYSS SD +G+ TLTY+C+PR LS ML+ H+PALSN
Sbjct: 2455 R*DGGIGRPTTLPQRRAISGMLYSSRSDLAGDTTLTYNCAPR*YLSHMLDLMFHIPALSN 2634
Query: 558 VIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
V ITAVHDLGYTWIVCRLTVS RLYV + VH+PGPM
Sbjct: 2635 VSITAVHDLGYTWIVCRLTVSSRLYVFLHSGVHIPGPM 2748
Score = 101 bits (215), Expect(2) = 9e-078
Identities = 43/72 (59%), Positives = 47/72 (65%)
Frame = -1 / -2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 3064 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 2885
Query: 706 IXIXXXAFFAVG 671
I AFFA G
Sbjct: 2884 FHINGYAFFAAG 2849
Score = 88.1 bits (186), Expect(3) = 9e-038
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = +2 / +3
Query: 368 LDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVGAD 532
L G VGR HRQADDLAAAE LRHVVLVPERP RR A VQL EV+PLP VG D
Sbjct: 2445 LCGEVGRRHRQADDLAAAEGYLRHVVLVPERPRRRYHADVQLRPEVVPLPHVGPD 2609
Score = 80.3 bits (169), Expect(3) = 2e-034
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = -2 / -2
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+AWG GR+ G RTT WTR*AGTRSRCT+GRGRR* *RSTTR C
Sbjct: 2752 AAWGRGYGRRSAGRRTTCWTR*AGTRSRCTRGRGRR*C*RSTTRGC 2615
Score = 75.8 bits (159), Expect(3) = 2e-034
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -3 / -3
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
E +QH+G R +AG VA GRVQHAGD PPLRQGRRPADA VLP R+ +++
Sbjct: 2613 EHQVQHVGEVLPRGAVVRQRGIAGEVAPGRVQHAGDSPPLRQGRRPADAAVLPPRIIKQN 2434
Score = 73.0 bits (153), Expect(2) = 3e-058
Identities = 36/72 (50%), Positives = 38/72 (52%)
Frame = +3 / +3
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
P AKKA LFSGFSK T M RNSA MTLGA G V+ GG PM
Sbjct: 2850 PAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGASFCGTVVAGGTSPMRLYSNTPE 3029
Query: 852 XALKYXXXLTGV 887
ALKY L+GV
Sbjct: 3030 EALKYSASLSGV 3065
Score = 63.8 bits (133), Expect(3) = 9e-038
Identities = 32/68 (47%), Positives = 35/68 (51%)
Frame = +2 / +2
Query: 677 GEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVGCHLXXXXXXXXXXPDEXXLEXXXAG 856
GE+G D + DALLGVLE DE ELG DDVG L DE LE G
Sbjct: 2855 GEEGVAVDVEGVDALLGVLEDDLDEGAELGGDDVGRELLRDGGGRRHVADEVVLEHPGGG 3034
Query: 857 VEVLXXLD 880
VEVL L+
Sbjct: 3035 VEVLGELE 3058
Score = 47.8 bits (98), Expect(3) = 9e-038
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHA 673
LDRVPAHRVQ+VVR P RP+ PHA
Sbjct: 2670 LDRVPAHRVQQVVRLPALRRPYPRPHA 2750
Score = 32.2 bits (64), Expect(3) = 2e-034
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2 / -3
Query: 840 SSXXSSGXXXXXXXXXXRWHPTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSP 676
SS SS PT S SRTPRRAS S S P SP
Sbjct: 3018 SSTTSSATCRRPPPSRRSSRPTSSPPSSAPSSRSSSRTPRRASTPSTSTATPSSP 2854
>ref|XM_475449.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1671
Score = 294 bits (636), Expect = 1e-077
Identities = 113/169 (66%), Positives = 133/169 (78%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFN F+ + PP+ P + PNVI+AEFR FI + FENPEKS+
Sbjct: 1153 TPLKLAEYFNVTDGVFRYNQMTDVPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDS 1332
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ + AFFAVGMGPGKW+A R TYNLLD VSRH++QVYPRSWTA+M+TFDNAGMW+VR
Sbjct: 1333 VHLDGYAFFAVGMGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVR 1512
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSY 380
SNIWER YLGEQLY+SV+SP RSLRDEYNMPE +LRCGKVVGLP+PPSY
Sbjct: 1513 SNIWERHYLGEQLYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSY 1659
Score = 227 bits (490), Expect = 2e-057
Identities = 105/180 (58%), Positives = 115/180 (63%)
Frame = +3 / -2
Query: 369 *TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTLHMPA 548
* R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR CLSQML+ T H+PA
Sbjct: 1670 *AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTFHIPA 1491
Query: 549 LSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSG 728
LSNV + AVHDLGYTW CRLT S RLYV +A H PGP+PTAKKA LFSG
Sbjct: 1490 LSNVSMIAVHDLGYTWTECRLTPSSRLYVFLSSADHFPGPIPTAKKA*PSRWTESMLFSG 1311
Query: 729 FSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGVXXXXXXT 908
FSK M RNSA+MTLG G + GG + L S LKY L+GV T
Sbjct: 1310 FSKMISMKVRNSAVMTLGTTWRGPLTAGGTSVIWLYLKTPSVTLKYSASLSGVSASTWET 1131
Score = 103 bits (220), Expect(2) = 1e-036
Identities = 48/81 (59%), Positives = 51/81 (62%)
Frame = -2 / +2
Query: 780 PTXXXXXXXXXSXWXSRTPRRASXXSXSXXXPFSPSAWGPANGRQRRGVRTTSWTR*AGT 601
PT S SRTPRRA S S P SPS WG +GR+RRG RTT WT *AGT
Sbjct: 1259 PTSSPPSSAPSSRSSSRTPRRAWTPSTSTATPSSPSGWGRGSGRRRRGRRTTCWTG*AGT 1438
Query: 600 RSRCTQGRGRR***RSTTRAC 538
RSRCT+GRGRR *RSTT C
Sbjct: 1439 RSRCTRGRGRRSC*RSTTPGC 1501
Score = 93.6 bits (198), Expect(3) = 5e-040
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / -1
Query: 380 VGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLPDVG 526
VGR RQADDLAAAE LRHVVLVPERP RRDDA V+LLAEV+PLPDVG
Sbjct: 1659 VGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLPDVG 1513
Score = 86.8 bits (183), Expect(3) = 5e-040
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2 / -1
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPHADGEKGXXXDXDXXDALLGVLEXHXDEXXELGAD 772
LDRVPAH VQ+VVR P RP PH DGE+G + D ALLGVLE DE ELG D
Sbjct: 1446 LDRVPAHPVQQVVRLPLLRRPLPRPHPDGEEGVAVEVDGVHALLGVLEDDLDEGAELGGD 1267
Query: 773 DVG 781
DVG
Sbjct: 1266 DVG 1258
Score = 74.4 bits (156), Expect(2) = 1e-036
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -3 / +3
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLP 378
ER +QHLG R LAG VA GRVQHAG++PPLRQGRRPA A VLP
Sbjct: 1503 EREVQHLGEALPRRAALHQRRLAGEVAPGRVQHAGERPPLRQGRRPAAAAVLP 1661
Score = 27.2 bits (53), Expect(3) = 5e-040
Identities = 21/41 (51%), Positives = 21/41 (51%)
Frame = +1 / -3
Query: 757 GTRR**RWVPSWWGPCWRAXRXR*XXT*XXXRXR*STXXA* 879
GTRR**RW G RA R T* R R*ST A*
Sbjct: 1282 GTRR**RWGRRGGGH*RRAARRSSGCT*RRRR*R*STRRA* 1160
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
complete sequence
Length = 127642
Score = 220 bits (475), Expect(2) = 6e-071
Identities = 85/110 (77%), Positives = 96/110 (87%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQ 491
MGPGKW+A R TYNLLD VSRH++QVYPRSWTA+M+TFDNAGMW+VRSNIWER YLGEQ
Sbjct: 19637 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 19458
Query: 490 LYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
LY+SV+SP RSLRDEYNMPE +LRCGKVVGLP+PPSY * +DR VL
Sbjct: 19457 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA*FIDRCIYVL 19308
Score = 171 bits (367), Expect(2) = 2e-051
Identities = 75/114 (65%), Positives = 84/114 (73%)
Frame = +3 / +1
Query: 330 LVVYSTVRDRSTL*TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYC 509
++ +ST RS * R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR C
Sbjct: 19297 VIGFSTYMHRSMN*AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*C 19476
Query: 510 LSQMLERTLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
LSQML+ T H+PALSNV + AVHDLGYTW CRLT S RLYV +A H PGP+
Sbjct: 19477 LSQMLDLTFHIPALSNVSMIAVHDLGYTWTECRLTPSSRLYVFLSSADHFPGPI 19638
Score = 101 bits (216), Expect(3) = 6e-030
Identities = 47/63 (74%), Positives = 50/63 (79%)
Frame = +2 / +3
Query: 338 VQHRARSIDALDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLP 517
VQ+ SID L VGR RQADDLAAAE LRHVVLVPERP RRDDA V+LLAEV+PLP
Sbjct: 19305 VQYIYASIDELGREVGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLP 19484
Query: 518 DVG 526
DVG
Sbjct: 19485 DVG 19493
Score = 82.2 bits (173), Expect(2) = 6e-071
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -1 / -3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFN F+ + PP+ P + PNVI+AEFR FI + FENPEKS+
Sbjct: 20417 TPLKLAEYFNVTDGVFRYNQMTDVPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDS 20238
Query: 706 IXIXXXAFFAVG 671
+ + AFFAVG
Sbjct: 20237 VHLDGYAFFAVG 20202
Score = 77.6 bits (163), Expect(2) = 1e-029
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = -3 / -2
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
ER +QHLG R LAG VA GRVQHAG++PPLRQGRRPA A VLP L RS
Sbjct: 19503 EREVQHLGEALPRRAALHQRRLAGEVAPGRVQHAGERPPLRQGRRPAAAAVLPPGLIHRS 19324
Query: 356 I 354
+
Sbjct: 19323 M 19321
Score = 76.7 bits (161), Expect(2) = 1e-029
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = -2 / -1
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+ WG +GR+RRG RTT WT *AGTRSRCT+GRGRR *RSTT C
Sbjct: 19642 AGWGRGSGRRRRGRRTTCWTG*AGTRSRCTRGRGRRSC*RSTTPGC 19505
Score = 66.1 bits (138), Expect(2) = 2e-051
Identities = 34/79 (43%), Positives = 38/79 (48%)
Frame = +3 / +1
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
PTAKKA LFSGFSK M RNSA+MTLG G + GG + L S
Sbjct: 20203 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGTSVIWLYLKTPS 20382
Query: 852 XALKYXXXLTGVXXXXXXT 908
LKY L+GV T
Sbjct: 20383 VTLKYSASLSGVSASTWET 20439
Score = 49.2 bits (101), Expect(3) = 6e-030
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2 / +3
Query: 674 DGEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVG 781
DGE+G + D ALLGVLE DE ELG DDVG
Sbjct: 20205 DGEEGVAVEVDGVHALLGVLEDDLDEGAELGGDDVG 20312
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2 / +3
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPH 670
LDRVPAH VQ+VVR P RP PH
Sbjct: 19560 LDRVPAHPVQQVVRLPLLRRPLPRPH 19637
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15,
complete sequence
Length = 137357
Score = 220 bits (475), Expect(2) = 6e-071
Identities = 85/110 (77%), Positives = 96/110 (87%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQ 491
MGPGKW+A R TYNLLD VSRH++QVYPRSWTA+M+TFDNAGMW+VRSNIWER YLGEQ
Sbjct: 128769 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 128590
Query: 490 LYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
LY+SV+SP RSLRDEYNMPE +LRCGKVVGLP+PPSY * +DR VL
Sbjct: 128589 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA*FIDRCIYVL 128440
Score = 171 bits (367), Expect(2) = 3e-051
Identities = 75/114 (65%), Positives = 84/114 (73%)
Frame = +3 / +2
Query: 330 LVVYSTVRDRSTL*TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYC 509
++ +ST RS * R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR C
Sbjct: 128429 VIGFSTYMHRSMN*AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*C 128608
Query: 510 LSQMLERTLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
LSQML+ T H+PALSNV + AVHDLGYTW CRLT S RLYV +A H PGP+
Sbjct: 128609 LSQMLDLTFHIPALSNVSMIAVHDLGYTWTECRLTPSSRLYVFLSSADHFPGPI 128770
Score = 101 bits (216), Expect(3) = 7e-030
Identities = 47/63 (74%), Positives = 50/63 (79%)
Frame = +2 / +1
Query: 338 VQHRARSIDALDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLP 517
VQ+ SID L VGR RQADDLAAAE LRHVVLVPERP RRDDA V+LLAEV+PLP
Sbjct: 128437 VQYIYASIDELGREVGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLP 128616
Query: 518 DVG 526
DVG
Sbjct: 128617 DVG 128625
Score = 82.2 bits (173), Expect(2) = 6e-071
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -1 / -3
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFN F+ + PP+ P + PNVI+AEFR FI + FENPEKS+
Sbjct: 129549 TPLKLAEYFNVTDGVFRYNQMTDVPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDS 129370
Query: 706 IXIXXXAFFAVG 671
+ + AFFAVG
Sbjct: 129369 VHLDGYAFFAVG 129334
Score = 77.6 bits (163), Expect(2) = 1e-029
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = -3 / -2
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
ER +QHLG R LAG VA GRVQHAG++PPLRQGRRPA A VLP L RS
Sbjct: 128635 EREVQHLGEALPRRAALHQRRLAGEVAPGRVQHAGERPPLRQGRRPAAAAVLPPGLIHRS 128456
Query: 356 I 354
+
Sbjct: 128455 M 128453
Score = 76.7 bits (161), Expect(2) = 1e-029
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = -2 / -1
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+ WG +GR+RRG RTT WT *AGTRSRCT+GRGRR *RSTT C
Sbjct: 128774 AGWGRGSGRRRRGRRTTCWTG*AGTRSRCTRGRGRRSC*RSTTPGC 128637
Score = 66.1 bits (138), Expect(2) = 3e-051
Identities = 34/79 (43%), Positives = 38/79 (48%)
Frame = +3 / +2
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
PTAKKA LFSGFSK M RNSA+MTLG G + GG + L S
Sbjct: 129335 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGTSVIWLYLKTPS 129514
Query: 852 XALKYXXXLTGVXXXXXXT 908
LKY L+GV T
Sbjct: 129515 VTLKYSASLSGVSASTWET 129571
Score = 49.2 bits (101), Expect(3) = 7e-030
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 674 DGEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVG 781
DGE+G + D ALLGVLE DE ELG DDVG
Sbjct: 129337 DGEEGVAVEVDGVHALLGVLEDDLDEGAELGGDDVG 129444
Score = 40.9 bits (83), Expect(3) = 7e-030
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2 / +1
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPH 670
LDRVPAH VQ+VVR P RP PH
Sbjct: 128692 LDRVPAHPVQQVVRLPLLRRPLPRPH 128769
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 220 bits (475), Expect(2) = 5e-070
Identities = 85/110 (77%), Positives = 96/110 (87%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQ 491
MGPGKW+A R TYNLLD VSRH++QVYPRSWTA+M+TFDNAGMW+VRSNIWER YLGEQ
Sbjct: 128769 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 128590
Query: 490 LYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
LY+SV+SP RSLRDEYNMPE +LRCGKVVGLP+PPSY * +DR VL
Sbjct: 128589 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA*FIDRCIYVL 128440
Score = 171 bits (367), Expect(2) = 2e-050
Identities = 75/114 (65%), Positives = 84/114 (73%)
Frame = +3 / +2
Query: 330 LVVYSTVRDRSTL*TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYC 509
++ +ST RS * R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR C
Sbjct: 128429 VIGFSTYMHRSMN*AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*C 128608
Query: 510 LSQMLERTLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
LSQML+ T H+PALSNV + AVHDLGYTW CRLT S RLYV +A H PGP+
Sbjct: 128609 LSQMLDLTFHIPALSNVSMIAVHDLGYTWTECRLTPSSRLYVFLSSADHFPGPI 128770
Score = 101 bits (216), Expect(3) = 3e-028
Identities = 47/63 (74%), Positives = 50/63 (79%)
Frame = +2 / +1
Query: 338 VQHRARSIDALDGAVGRWHRQADDLAAAEAGLRHVVLVPERPLRRDDAHVQLLAEVLPLP 517
VQ+ SID L VGR RQADDLAAAE LRHVVLVPERP RRDDA V+LLAEV+PLP
Sbjct: 128437 VQYIYASIDELGREVGRRQRQADDLAAAEGVLRHVVLVPERPRRRDDADVELLAEVVPLP 128616
Query: 518 DVG 526
DVG
Sbjct: 128617 DVG 128625
Score = 82.2 bits (173), Expect(2) = 5e-070
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -1 / -1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFN F+ + PP+ P + PNVI+AEFR FI + FENPEKS+
Sbjct: 129549 TPLKLAEYFNVTDGVFRYNQMTDVPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDS 129370
Query: 706 IXIXXXAFFAVG 671
+ + AFFAVG
Sbjct: 129369 VHLDGYAFFAVG 129334
Score = 77.6 bits (163), Expect(2) = 1e-029
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = -3 / -3
Query: 536 ERPLQHLGXXXXXXXXXXXRHLAGAVAQGRVQHAGDQPPLRQGRRPADATVLPRRLERRS 357
ER +QHLG R LAG VA GRVQHAG++PPLRQGRRPA A VLP L RS
Sbjct: 128635 EREVQHLGEALPRRAALHQRRLAGEVAPGRVQHAGERPPLRQGRRPAAAAVLPPGLIHRS 128456
Query: 356 I 354
+
Sbjct: 128455 M 128453
Score = 76.7 bits (161), Expect(2) = 1e-029
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = -2 / -2
Query: 675 SAWGPANGRQRRGVRTTSWTR*AGTRSRCTQGRGRR***RSTTRAC 538
+ WG +GR+RRG RTT WT *AGTRSRCT+GRGRR *RSTT C
Sbjct: 128774 AGWGRGSGRRRRGRRTTCWTG*AGTRSRCTRGRGRRSC*RSTTPGC 128637
Score = 66.1 bits (138), Expect(2) = 2e-050
Identities = 34/79 (43%), Positives = 38/79 (48%)
Frame = +3 / +2
Query: 672 PTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXS 851
PTAKKA LFSGFSK M RNSA+MTLG G + GG + L S
Sbjct: 129335 PTAKKA*PSRWTESMLFSGFSKMISMKVRNSAVMTLGTTWRGPLTAGGTSVIWLYLKTPS 129514
Query: 852 XALKYXXXLTGVXXXXXXT 908
LKY L+GV T
Sbjct: 129515 VTLKYSASLSGVSASTWET 129571
Score = 49.2 bits (101), Expect(3) = 3e-028
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 674 DGEKGXXXDXDXXDALLGVLEXHXDEXXELGADDVG 781
DGE+G + D ALLGVLE DE ELG DDVG
Sbjct: 129337 DGEEGVAVEVDGVHALLGVLEDDLDEGAELGGDDVG 129444
Score = 40.9 bits (83), Expect(3) = 3e-028
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2 / +1
Query: 593 LDRVPAHRVQEVVRTPRRCRPFAGPH 670
LDRVPAH VQ+VVR P RP PH
Sbjct: 128692 LDRVPAHPVQQVVRLPLLRRPLPRPH 128769
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 220 bits (475), Expect = 2e-055
Identities = 85/110 (77%), Positives = 96/110 (87%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQ 491
MGPGKW+A R TYNLLD VSRH++QVYPRSWTA+M+TFDNAGMW+VRSNIWER YLGEQ
Sbjct: 23738816 MGPGKWSAEERKTYNLLDGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQ 23738637
Query: 490 LYVSVISPERSLRDEYNMPETSLRCGKVVGLPMPPSYRAV*SVDRSRTVL 341
LY+SV+SP RSLRDEYNMPE +LRCGKVVGLP+PPSY * +DR VL
Sbjct: 23738636 LYISVVSPARSLRDEYNMPENALRCGKVVGLPLPPSYLPA*FIDRCIYVL 23738487
Score = 171 bits (367), Expect = 1e-040
Identities = 75/114 (65%), Positives = 84/114 (73%)
Frame = +3 / +1
Query: 330 LVVYSTVRDRSTL*TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYC 509
++ +ST RS * R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR C
Sbjct: 23738476 VIGFSTYMHRSMN*AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*C 23738655
Query: 510 LSQMLERTLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPM 671
LSQML+ T H+PALSNV + AVHDLGYTW CRLT S RLYV +A H PGP+
Sbjct: 23738656 LSQMLDLTFHIPALSNVSMIAVHDLGYTWTECRLTPSSRLYVFLSSADHFPGPI 23738817
>gb|C73196.1|C73196 C73196 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3359_1A, mRNA sequence
Length = 418
Score = 208 bits (448), Expect = 9e-052
Identities = 86/133 (64%), Positives = 95/133 (71%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 20 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 199
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
I AFFA GMGPG WT R TYNLLDTVSRHTIQVYPRSWTAVM+TFDNAG+ R
Sbjct: 200 FHINGYAFFAAGMGPGIWTPEFRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGILDXR 379
Query: 526 SNIWERQYLGEQL 488
+ WER LG ++
Sbjct: 380 FHXWERYLLGGEI 418
Score = 147 bits (315), Expect = 2e-033
Identities = 71/130 (54%), Positives = 77/130 (59%)
Frame = +3 / -2
Query: 498 PRYCLSQMLERTLHMPALSNVIITAVHDLGYTWIVCRLTVSRRLYVLRDAAVHLPGPMPT 677
P LS M +PALSNV ITAVHDLGYT IVCRLTVS RLYV ++ VH+PGP P
Sbjct: 408 PSKYLSXMWNLMSKIPALSNVSITAVHDLGYT*IVCRLTVSSRLYVFLNSGVHIPGPXPA 229
Query: 678 AKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAILVGAVLEGGXXPMXXXLXXXSXA 857
AKKA LFSGFS T M RNSA TLGA G V+ GG PM A
Sbjct: 228 AKKA*PLMWKESMLFSGFSXTTSMKVRNSAEXTLGASFCGTVVAGGTSPMRLYSNTPEEA 49
Query: 858 LKYXXXLTGV 887
LKY L+GV
Sbjct: 48 LKYSASLSGV 19
>gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2633, mRNA sequence
Length = 434
Score = 182 bits (392), Expect = 5e-044
Identities = 69/88 (78%), Positives = 79/88 (89%)
Frame = -1 / +2
Query: 619 DTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYN 440
D VSRH++QVYPRSWTA+M+TFDNAGMW+VRSNIWER YLGEQLY+SV+SP RSLRDEYN
Sbjct: 2 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 181
Query: 439 MPETSLRCGKVVGLPMPPSYRAV*SVDR 356
PE +LRCGKVVGLP+PPSY * +DR
Sbjct: 182 XPENALRCGKVVGLPLPPSYLPA*FIDR 265
Score = 144 bits (309), Expect = 1e-032
Identities = 64/88 (72%), Positives = 68/88 (77%)
Frame = +3 / -3
Query: 357 RSTL*TAR*DGGIGRPTTLPQRRLVSGMLYSSLSDRSGEMTLTYSCSPRYCLSQMLERTL 536
RS * R*DGG GRPTTLPQRR SGMLYSS SD +GE TL SCSPR CLSQML+ T
Sbjct: 264 RSMN*AGR*DGGSGRPTTLPQRRAFSGMLYSSRSDLAGETTLM*SCSPR*CLSQMLDLTF 85
Query: 537 HMPALSNVIITAVHDLGYTWIVCRLTVS 620
H+PALSNV + AVHDLGYTW CRLT S
Sbjct: 84 HIPALSNVSMIAVHDLGYTWTECRLTPS 1
>ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1692
Score = 167 bits (360), Expect = 1e-039
Identities = 64/125 (51%), Positives = 84/125 (67%)
Frame = -1 / +1
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V+ A +R ++ + FENPE + I AF+ VGM GKW++ASR YNL D VSR+T+
Sbjct: 1297 VMGASYRDYVEIVFENPENEVQSWHIDGYAFWVVGMDGGKWSSASRQGYNLRDAVSRYTV 1476
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP SWTA+ M DN GMW+VRS W RQYLG+Q Y+ V + S RDEY +P+ +L C
Sbjct: 1477 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 1656
Query: 415 GKVVG 401
G+ G
Sbjct: 1657 GRAAG 1671
>dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098E17, full
insert sequence
Length = 1954
Score = 162 bits (349), Expect = 4e-038
Identities = 63/125 (50%), Positives = 84/125 (67%)
Frame = -1 / +2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V++A R ++ V FEN E + I AF+ VGM G+WT ASR +YNL D V+R+T+
Sbjct: 1265 VMAANMRDYVEVIFENSENFVQSWHIDGYAFWVVGMDGGQWTPASRQSYNLRDAVARYTL 1444
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 1445 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 1624
Query: 415 GKVVG 401
G+ G
Sbjct: 1625 GRASG 1639
>dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067H20, full
insert sequence
Length = 2016
Score = 161 bits (346), Expect = 1e-037
Identities = 63/159 (39%), Positives = 92/159 (57%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K Y+ + P A + V+ +++R F+ + FEN E S+
Sbjct: 1228 TPLKLADYYRISDVFRLGGIPDAPPAGAAAAPRSEAAVMDSDYRSFLEIVFENSEDSVQI 1407
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ + F VGM G W+ SR +YNL+D VSR T+QVYPR+WTAV++ DN GMW++R
Sbjct: 1408 WHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTVQVYPRAWTAVLVALDNVGMWNLR 1587
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGK 410
S W R+Y G+Q Y+ V +P S RDE +P +LRCG+
Sbjct: 1588 SEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRCGR 1704
>dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100A14, full
insert sequence
Length = 1977
Score = 161 bits (346), Expect = 1e-037
Identities = 63/159 (39%), Positives = 92/159 (57%)
Frame = -1 / +2
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K Y+ + P A + V+ +++R F+ + FEN E S+
Sbjct: 1235 TPLKLADYYRISDVFRLGGIPDAPPAGAAAAPRSEAAVMDSDYRSFLEIVFENSEDSVQI 1414
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ + F VGM G W+ SR +YNL+D VSR T+QVYPR+WTAV++ DN GMW++R
Sbjct: 1415 WHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTVQVYPRAWTAVLVALDNVGMWNLR 1594
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGK 410
S W R+Y G+Q Y+ V +P S RDE +P +LRCG+
Sbjct: 1595 SEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRCGR 1711
>ref|XM_473496.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1665
Score = 161 bits (346), Expect = 1e-037
Identities = 63/159 (39%), Positives = 92/159 (57%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K Y+ + P A + V+ +++R F+ + FEN E S+
Sbjct: 1144 TPLKLADYYRISDVFRLGGIPDAPPAGAAAAPRSEAAVMDSDYRSFLEIVFENSEDSVQI 1323
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVR 527
+ + F VGM G W+ SR +YNL+D VSR T+QVYPR+WTAV++ DN GMW++R
Sbjct: 1324 WHLDGYSLFVVGMDRGVWSEQSRKSYNLVDAVSRCTVQVYPRAWTAVLVALDNVGMWNLR 1503
Query: 526 SNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGK 410
S W R+Y G+Q Y+ V +P S RDE +P +LRCG+
Sbjct: 1504 SEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALRCGR 1620
>ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1968
Score = 154 bits (330), Expect = 2e-035
Identities = 55/126 (43%), Positives = 84/126 (66%)
Frame = -1 / +2
Query: 775 VISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTI 596
V+ FI V F+N E + + F+ VG G G+WT R+TYNL+D +RHT+
Sbjct: 1277 VVRLNLHEFIEVVFQNTENELQSWHLDGYDFWVVGYGNGQWTENQRTTYNLVDAQARHTV 1456
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP W+A++++ DN GMW++RS W+RQYLG+QLY+ V +P++S +EY++P ++ C
Sbjct: 1457 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1636
Query: 415 GKVVGL 398
G+ GL
Sbjct: 1637 GRAAGL 1654
>dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C13, full
insert sequence
Length = 1967
Score = 152 bits (326), Expect = 6e-035
Identities = 54/118 (45%), Positives = 82/118 (69%)
Frame = -1 / +1
Query: 751 FIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
FI V F+N E + + F+ VG G G+WT R+TYNL+D +RHT+QVYP W+
Sbjct: 1300 FIEVVFQNTENELQSWHLDGYDFWVVGYGNGQWTENQRTTYNLVDAQARHTVQVYPNGWS 1479
Query: 571 AVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGL 398
A++++ DN GMW++RS W+RQYLG+QLY+ V +P++S +EY++P ++ CG+ GL
Sbjct: 1480 AILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILCGRAAGL 1653
>gb|C71978.1|C71978 C71978 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0725_1A, mRNA sequence
Length = 356
Score = 138 bits (296), Expect = 9e-031
Identities = 58/92 (63%), Positives = 62/92 (67%)
Frame = -1 / +1
Query: 886 TPVKXXXYFNAXXXXFKXXLIGXXPPSNTAPTKMAPNVISAEFRXFIXVXFENPEKSIXX 707
TP+K YFNA F+ LIG PP+ T P K+APNVISAEFR FI V FENPEKSI
Sbjct: 79 TPLKLAEYFNASSGVFEYNLIGDVPPATTVPQKLAPNVISAEFRTFIEVVFENPEKSIDS 258
Query: 706 IXIXXXAFFAVGMGPGKWTAASRSTYNLLDTV 611
I AFFA GMGPG WT R TYNLLDTV
Sbjct: 259 FHINGYAFFAAGMGPGIWTPEXRKTYNLLDTV 354
Score = 106 bits (226), Expect = 4e-021
Identities = 50/93 (53%), Positives = 54/93 (58%)
Frame = +3 / -1
Query: 609 LTVSRRLYVLRDAAVHLPGPMPTAKKAXXXXXXXXXLFSGFSKXTXMNXRNSALMTLGAI 788
LTVS RLYV + VH+PGPMP AKKA LFSGFSK T M RNSA MTLGA
Sbjct: 356 LTVSSRLYVFLXSGVHIPGPMPAAKKA*PLMWKESMLFSGFSKTTSMKVRNSAEMTLGAS 177
Query: 789 LVGAVLEGGXXPMXXXLXXXSXALKYXXXLTGV 887
G V+ GG PM ALKY L+GV
Sbjct: 176 FCGTVVAGGTSPMRLYSNTPEEALKYSASLSGV 78
>gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0531, mRNA sequence
Length = 699
Score = 138 bits (296), Expect = 9e-031
Identities = 47/95 (49%), Positives = 72/95 (75%)
Frame = -1 / +1
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQY 503
+ VG G G+WT R+TYNL+D +RHT+QVYP W+A++++ DN GMW++RS W+RQY
Sbjct: 103 WVVGYGNGQWTENQRTTYNLVDAQARHTVQVYPNGWSAILVSLDNQGMWNLRSANWDRQY 282
Query: 502 LGEQLYVSVISPERSLRDEYNMPETSLRCGKVVGL 398
LG+QLY+ V +P++S +EY++P ++ CG+ GL
Sbjct: 283 LGQQLYMRVWTPQQSFSNEYSIPTNAILCGRAAGL 387
>ref|XM_480151.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1803
Score = 129 bits (277), Expect = 4e-028
Identities = 52/137 (37%), Positives = 79/137 (57%)
Frame = -1 / +1
Query: 799 APTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLL 620
AP KMA + ++A ++ F+ + F+N + + + +FF VGM G WT RS YN
Sbjct: 1285 APPKMASSTLNASYKGFLEIVFQNNDTGVQTYHLDGYSFFVVGMDNGDWTPDCRSRYNKW 1464
Query: 619 DTVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYN 440
D +SR T QV+P WTAV+++ DN G+W++RS + Y G+++YV V P E
Sbjct: 1465 DAISRSTTQVFPGGWTAVLVSLDNVGIWNLRSEKLDNWYNGQEVYVKVADPLGYNITEMI 1644
Query: 439 MPETSLRCGKVVGLPMP 389
MP+ +L CG + L P
Sbjct: 1645 MPDNALYCGLLKDLQKP 1695
>gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030P13f, DNA sequence
Length = 598
Score = 99.1 bits (210), Expect(2) = 4e-027
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -1
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 334 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 155
Query: 415 GKVVG 401
G+ G
Sbjct: 154 GRASG 140
Score = 49.2 bits (101), Expect(2) = 4e-027
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 586 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 488
>dbj|AK101455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A20, full
insert sequence
Length = 2162
Score = 121 bits (259), Expect = 1e-025
Identities = 47/111 (42%), Positives = 73/111 (65%)
Frame = -1 / +1
Query: 790 KMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTV 611
K+ ++I+ ++ F+ + F+N S+ + AFF VGM G WT SR TYN D V
Sbjct: 1342 KLDTSIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGV 1521
Query: 610 SRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERS 458
+R TIQV+P +WTAV++ DNAG+W++R + YLG+++Y+SV++PE S
Sbjct: 1522 ARSTIQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1674
>ref|XM_549803.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2162
Score = 121 bits (259), Expect = 1e-025
Identities = 47/111 (42%), Positives = 73/111 (65%)
Frame = -1 / +1
Query: 790 KMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTV 611
K+ ++I+ ++ F+ + F+N S+ + AFF VGM G WT SR TYN D V
Sbjct: 1342 KLDTSIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGV 1521
Query: 610 SRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERS 458
+R TIQV+P +WTAV++ DNAG+W++R + YLG+++Y+SV++PE S
Sbjct: 1522 ARSTIQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1674
>ref|NM_197271.1| Oryza sativa (japonica cultivar-group) putative ascorbate oxidase
(OSJNBb0015K05.9), mRNA
Length = 1722
Score = 121 bits (258), Expect = 2e-025
Identities = 46/109 (42%), Positives = 72/109 (66%)
Frame = -1 / +1
Query: 790 KMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTV 611
+M ++I+ +R F+ + F+N + + + AFF VGM G+WT SR TYN D V
Sbjct: 1213 RMGRSIINGTYRGFMELIFQNNDTRMQSYHMDGYAFFVVGMDYGEWTEDSRGTYNKGDGV 1392
Query: 610 SRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPE 464
+R T+QVYP +W AV+++ DN G+W+VRS + YLG+++YV V++PE
Sbjct: 1393 ARSTVQVYPGAWAAVLVSLDNVGVWNVRSENLDSWYLGQEVYVRVVNPE 1539
>gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014794, whole
genome shotgun sequence
Length = 29916
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / +2
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 3419 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 3598
Query: 415 GKVVG 401
G+ G
Sbjct: 3599 GRASG 3613
Score = 49.2 bits (101), Expect(2) = 2e-025
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / +2
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 3167 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 3265
>gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016348,
whole genome shotgun sequence
Length = 5078
Score = 97.7 bits (207), Expect(2) = 7e-025
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = -1 / -1
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP SWTA+ M DN GMW+VRS W RQYLG+Q Y+ V + S RDEY +P+ +L C
Sbjct: 452 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 273
Query: 415 GKVVG 401
G+ G
Sbjct: 272 GRAAG 258
Score = 46.0 bits (94), Expect(2) = 7e-025
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVY 587
F M GKW++ASR YNL D VSR+T+QV+
Sbjct: 1406 FVSRMDGGKWSSASRQGYNLRDAVSRYTVQVW 1311
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0003H08
Length = 142068
Score = 99.1 bits (210), Expect(2) = 8e-025
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -3
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 5239 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 5060
Query: 415 GKVVG 401
G+ G
Sbjct: 5059 GRASG 5045
Score = 49.2 bits (101), Expect(2) = 8e-025
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 5491 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 5393
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710B08
Length = 186991
Score = 99.1 bits (210), Expect(2) = 1e-024
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -2
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 153825 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 153646
Query: 415 GKVVG 401
G+ G
Sbjct: 153645 GRASG 153631
Score = 49.2 bits (101), Expect(2) = 1e-024
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -2
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 154077 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 153979
>gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006E03r, DNA sequence
Length = 753
Score = 99.1 bits (210), Expect(2) = 1e-024
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -3
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 334 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 155
Query: 415 GKVVG 401
G+ G
Sbjct: 154 GRASG 140
Score = 40.9 bits (83), Expect(2) = 1e-024
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+ T A+R +YNL D V+R+T+QVY W+
Sbjct: 586 MDGGQ*TPANRQSYNLRDAVARYTLQVYQCRWS 488
>dbj|AK102494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095A13, full
insert sequence
Length = 2224
Score = 117 bits (250), Expect = 2e-024
Identities = 45/111 (40%), Positives = 70/111 (63%)
Frame = -1 / +3
Query: 796 PTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLD 617
P M +VI++ ++ F+ + F+N + + I AF+ VGM G+WT SR TYN D
Sbjct: 1344 PPVMKTSVINSTYKNFLEIVFQNNDTKVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWD 1523
Query: 616 TVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPE 464
VSR T QV+P +WTAVM++ D+ G W+VR+ + YLG++ Y+ V+ P+
Sbjct: 1524 GVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPD 1676
>ref|NM_185313.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 2223
Score = 117 bits (250), Expect = 2e-024
Identities = 45/111 (40%), Positives = 70/111 (63%)
Frame = -1 / +2
Query: 796 PTKMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLD 617
P M +VI++ ++ F+ + F+N + + I AF+ VGM G+WT SR TYN D
Sbjct: 1343 PPVMKTSVINSTYKNFLEIVFQNNDTKVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWD 1522
Query: 616 TVSRHTIQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPE 464
VSR T QV+P +WTAVM++ D+ G W+VR+ + YLG++ Y+ V+ P+
Sbjct: 1523 GVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYLGQETYIRVVDPD 1675
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 96.8 bits (205), Expect(2) = 6e-024
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = -1 / -1
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPR+WTAV++ DN GMW++RS W R+Y G+Q Y+ V +P S RDE +P +LR
Sbjct: 5904102 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 5903923
Query: 418 CGK 410
CG+
Sbjct: 5903922 CGR 5903914
Score = 38.2 bits (77), Expect(2) = 6e-024
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQV 590
M G W+ SR +YNL+D VSR T+QV
Sbjct: 5904283 MDRGVWSEQSRKSYNLVDAVSRCTVQV 5904203
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 96.8 bits (205), Expect(2) = 7e-024
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = -1 / -3
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPR+WTAV++ DN GMW++RS W R+Y G+Q Y+ V +P S RDE +P +LR
Sbjct: 1877446 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 1877267
Query: 418 CGK 410
CG+
Sbjct: 1877266 CGR 1877258
Score = 38.2 bits (77), Expect(2) = 7e-024
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQV 590
M G W+ SR +YNL+D VSR T+QV
Sbjct: 1877625 MDRGVWSEQSRKSYNLVDAVSRCTVQV 1877545
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
complete sequence
Length = 147806
Score = 96.8 bits (205), Expect(2) = 7e-024
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = -1 / -1
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPR+WTAV++ DN GMW++RS W R+Y G+Q Y+ V +P S RDE +P +LR
Sbjct: 108020 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 107841
Query: 418 CGK 410
CG+
Sbjct: 107840 CGR 107832
Score = 38.2 bits (77), Expect(2) = 7e-024
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQV 590
M G W+ SR +YNL+D VSR T+QV
Sbjct: 108199 MDRGVWSEQSRKSYNLVDAVSRCTVQV 108119
>gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010279, whole
genome shotgun sequence
Length = 16074
Score = 96.8 bits (205), Expect(2) = 7e-024
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = -1 / -3
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLR 419
+QVYPR+WTAV++ DN GMW++RS W R+Y G+Q Y+ V +P S RDE +P +LR
Sbjct: 12076 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 11897
Query: 418 CGK 410
CG+
Sbjct: 11896 CGR 11888
Score = 38.2 bits (77), Expect(2) = 7e-024
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1 / -2
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQV 590
M G W+ SR +YNL+D VSR T+QV
Sbjct: 12257 MDRGVWSEQSRKSYNLVDAVSRCTVQV 12177
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0409B11
Length = 168354
Score = 97.7 bits (207), Expect(2) = 2e-023
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = -1 / +3
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP SWTA+ M DN GMW+VRS W RQYLG+Q Y+ V + S RDEY +P+ +L C
Sbjct: 134280 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 134459
Query: 415 GKVVG 401
G+ G
Sbjct: 134460 GRAAG 134474
Score = 46.0 bits (94), Expect(2) = 2e-023
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 682 FAVGMGPGKWTAASRSTYNLLDTVSRHTIQVY 587
F M GKW++ASR YNL D VSR+T+QV+
Sbjct: 133326 FVSRMDGGKWSSASRQGYNLRDAVSRYTVQVW 133421
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 99.1 bits (210), Expect(2) = 3e-023
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -3
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 5316801 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 5316622
Query: 415 GKVVG 401
G+ G
Sbjct: 5316621 GRASG 5316607
Score = 49.2 bits (101), Expect(2) = 3e-023
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -3
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 5317053 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 5316955
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 99.1 bits (210), Expect(2) = 6e-023
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1 / -1
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V SP S RDE +P+ +L C
Sbjct: 9258206 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 9258027
Query: 415 GKVVG 401
G+ G
Sbjct: 9258026 GRASG 9258012
Score = 49.2 bits (101), Expect(2) = 6e-023
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 9258458 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 9258360
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0022B05
Length = 151317
Score = 97.7 bits (207), Expect(2) = 1e-022
Identities = 32/66 (48%), Positives = 51/66 (77%)
Frame = -1 / +3
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP W+A++++ DN GMW++RS W+RQYLG+QLY+ V +P++S +EY++P ++ C
Sbjct: 54204 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 54383
Query: 415 GKVVGL 398
G+ GL
Sbjct: 54384 GRAAGL 54401
Score = 43.2 bits (88), Expect(2) = 1e-022
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -1 / +3
Query: 667 GPGKWTAASRSTYNLLDTVSRHTIQV 590
G G+WT R+TYNL+D +RHT+QV
Sbjct: 53694 GNGQWTENQRTTYNLVDAQARHTVQV 53771
>gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015064, whole
genome shotgun sequence
Length = 187699
Score = 97.7 bits (207), Expect(2) = 2e-022
Identities = 32/66 (48%), Positives = 51/66 (77%)
Frame = -1 / +2
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERSLRDEYNMPETSLRC 416
QVYP W+A++++ DN GMW++RS W+RQYLG+QLY+ V +P++S +EY++P ++ C
Sbjct: 123755 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 123934
Query: 415 GKVVGL 398
G+ GL
Sbjct: 123935 GRAAGL 123952
Score = 43.2 bits (88), Expect(2) = 2e-022
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -1 / +2
Query: 667 GPGKWTAASRSTYNLLDTVSRHTIQV 590
G G+WT R+TYNL+D +RHT+QV
Sbjct: 123245 GNGQWTENQRTTYNLVDAQARHTVQV 123322
>gb|C73552.1|C73552 C73552 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11023_1A, mRNA sequence
Length = 447
Score = 110 bits (235), Expect = 2e-022
Identities = 44/93 (47%), Positives = 62/93 (66%)
Frame = -1 / +2
Query: 736 FENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWTAVMMT 557
F+N S+ + AFF VGM G WT SR TYN D V+R TIQV+P +WTAV++
Sbjct: 2 FQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGVARSTIQVFPGAWTAVLVF 181
Query: 556 FDNAGMWSVRSNIWERQYLGEQLYVSVISPERS 458
DNAG+W++R + YLG+++Y+SV++PE S
Sbjct: 182 LDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 280
>ref|NM_183431.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1791
Score = 65.2 bits (136), Expect(2) = 3e-022
Identities = 22/47 (46%), Positives = 37/47 (78%)
Frame = -1 / +1
Query: 598 IQVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVISPERS 458
+QV+P +WTAV++ DNAG+W++R + YLG+++Y+SV++PE S
Sbjct: 1579 LQVFPGAWTAVLVFLDNAGIWNLRVENLDAWYLGQEVYISVVNPEDS 1719
Score = 64.3 bits (134), Expect(2) = 3e-022
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1 / +1
Query: 790 KMAPNVISAEFRXFIXVXFENPEKSIXXIXIXXXAFFAVGMGPGKWTAASRSTYNLLDTV 611
K+ ++I+ ++ F+ + F+N S+ + AFF VGM G WT SR TYN D V
Sbjct: 1288 KLDTSIINGTYKGFMEIIFQNNATSVQSYHLDGYAFFVVGMDYGLWTDNSRGTYNKWDGV 1467
Query: 610 SRHTIQV 590
+R TIQV
Sbjct: 1468 ARSTIQV 1488
>gb|AQ843693.1|AQ843693 nbxb0024N22r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0024N22r, DNA sequence
Length = 636
Score = 74.8 bits (157), Expect(3) = 1e-021
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -1 / -2
Query: 595 QVYPRSWTAVMMTFDNAGMWSVRSNIWERQYLGEQLYVSVIS 470
QVYP+SWTA+ M DN GMW++RS W RQYLG+Q Y+ V S
Sbjct: 380 QVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYS 255
Score = 49.2 bits (101), Expect(3) = 1e-021
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -1 / -1
Query: 670 MGPGKWTAASRSTYNLLDTVSRHTIQVYPRSWT 572
M G+WT ASR +YNL D V+R+T+QVY W+
Sbjct: 633 MDGGQWTPASRQSYNLRDAVARYTLQVYQCRWS 535
Score = 24.4 bits (47), Expect(3) = 1e-021
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1 / -3
Query: 460 SLRDEYNMPETSLRCGKVVG 401
S RDE +P+ +L CG+ G
Sbjct: 244 SWRDENPIPKNALLCGRASG 185
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,678,635,245
Number of Sequences: 438736
Number of extensions: 68258178
Number of successful extensions: 658052
Number of sequences better than 1.0e-020: 68
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 219530093090
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)