TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804898.2.1
(739 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_191262.1| Oryza sativa (japonica cultivar-group), p... 150 2e-034
dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA... 99 2e-034
ref|NM_194620.1| Oryza sativa (japonica cultivar-group) put... 99 2e-034
gb|CF325956.1|CF325956 JMT1--04-L09.g1 AtJMT-overexpressing... 93 5e-031
ref|NM_194623.1| Oryza sativa (japonica cultivar-group) put... 93 8e-031
dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA... 93 1e-030
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 72 3e-030
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-030
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 72 3e-030
gb|AACV01020695.1| Oryza sativa (japonica cultivar-group) c... 72 4e-030
dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-029
dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA... 75 8e-029
gb|AACV01002364.1| Oryza sativa (japonica cultivar-group) c... 91 1e-028
dbj|AP003268.4| Oryza sativa (japonica cultivar-group) geno... 91 9e-028
dbj|AP003249.3| Oryza sativa (japonica cultivar-group) geno... 91 1e-027
ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA 73 4e-027
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 91 8e-026
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 68 5e-025
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 68 5e-025
dbj|AP005881.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-025
dbj|AP005700.3| Oryza sativa (japonica cultivar-group) geno... 68 6e-025
gb|AACV01019708.1| Oryza sativa (japonica cultivar-group) c... 68 6e-025
dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA... 82 1e-024
gb|AACV01020697.1| Oryza sativa (japonica cultivar-group) c... 68 5e-024
gb|AU101176.1|AU101176 AU101176 Rice panicle at flowering s... 69 5e-023
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 66 9e-023
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 66 9e-023
dbj|AP004862.3| Oryza sativa (japonica cultivar-group) geno... 66 1e-022
dbj|AP004994.2| Oryza sativa (japonica cultivar-group) geno... 66 1e-022
gb|AACV01013392.1| Oryza sativa (japonica cultivar-group) c... 66 1e-022
ref|XM_481333.1| Oryza sativa (japonica cultivar-group), mRNA 64 8e-022
ref|XM_480279.1| Oryza sativa (japonica cultivar-group), mRNA 62 8e-022
dbj|AK071201.1| Oryza sativa (japonica cultivar-group) cDNA... 62 3e-021
>ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1137
Score = 150 bits (322), Expect = 2e-034
Identities = 60/145 (41%), Positives = 85/145 (58%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCX 235
RCTV++LP VVA P G G+ F GDMF+H+P ADA++LKWILH W +++C++I+ RC
Sbjct: 703 RCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLKWILHGWGDEECVRILRRCR 882
Query: 236 XXXXXXXXXXXXXXXDTVLGSRAXXXXXXKTCRETYVLDLHILSFVNGAEREEHEWRRIF 415
D V+GS + + + D+ ++ V ER+E E+ +IF
Sbjct: 883 EAVPAREDGRRVIVMDLVVGSSSSLGDGARDTETQLLWDVMMMGVVGSPERDEREFCKIF 1062
Query: 416 LAAGFRDYKITHTRGIPSIIEVFP* 490
AGF YKI H GI S+IEV+P*
Sbjct: 1063 HDAGFSGYKILHVLGIRSVIEVYP* 1137
Score = 88.1 bits (186), Expect(2) = 4e-023
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = -2 / -2
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPPWKD 118
DP+T SI IT P+SL ASL R I H SS CRIHL +ASA G SNMSP
Sbjct: 944 DPTTRSITITLLPSSLAGTASLHRRSIRTHSSSPHPCRIHLRRTASALGTWSNMSPATNS 765
Query: 117 RPAVPAGASATTWGRSMTVHL 55
P P G ATT G S TVHL
Sbjct: 764 TPPSPGGTVATTCGSSRTVHL 702
Score = 44.1 bits (90), Expect(2) = 4e-023
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -2 / -2
Query: 489 HGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRS 382
HG TSM D MPR C IL* PA+ IL +S SSRS
Sbjct: 1136 HG*TSMTDRMPRTCRIL*PLKPASWNILQNSRSSRS 1029
>dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O22, full
insert sequence
Length = 1269
Score = 98.7 bits (209), Expect(2) = 2e-034
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK+ILH W +D C+KI+ RC
Sbjct: 581 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLKYILHAWQDDDCVKILRRC 757
Score = 73.5 bits (154), Expect(3) = 5e-027
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T SIIITFPPASL IASL R IL SS Q+C+I+LS + SA G+ S SPP
Sbjct: 819 PTTTSIIITFPPASLARIASLHRRRILTQSSSCQACKIYLSSTTSAAGINSKKSPP 652
Score = 71.6 bits (150), Expect(2) = 2e-034
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / +2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 845 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1003
Score = 62.5 bits (130), Expect(3) = 5e-027
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = -2 / -1
Query: 507 LSIHHHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
L + H G TSM+D P VIL*S NPA++KI HSCSSRS P T + + +SL
Sbjct: 1020 LHLQKHQG*TSMIDRAPSTGVIL*SLNPASKKIFFHSCSSRSMPSTYIMKTSNKICISL 844
Score = 27.2 bits (53), Expect(3) = 5e-027
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 99 GASATTWGRSMTVHL 55
GASAT GRS TVHL
Sbjct: 624 GASATI*GRSKTVHL 580
>ref|NM_194620.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase
ZRP4 (OSJNBa0023I19.18), mRNA
Length = 1101
Score = 98.7 bits (209), Expect(2) = 2e-034
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK+ILH W +D C+KI+ RC
Sbjct: 679 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLKYILHAWQDDDCVKILRRC 855
Score = 73.5 bits (154), Expect(3) = 2e-025
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -2 / -2
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T SIIITFPPASL IASL R IL SS Q+C+I+LS + SA G+ S SPP
Sbjct: 917 PTTTSIIITFPPASLARIASLHRRRILTQSSSCQACKIYLSSTTSAAGINSKKSPP 750
Score = 71.6 bits (150), Expect(2) = 2e-034
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / +1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 943 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1101
Score = 57.0 bits (118), Expect(3) = 2e-025
Identities = 27/52 (51%), Positives = 33/52 (63%)
Frame = -2 / -2
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G TSM+D P VIL*S NPA++KI HSCSSRS P T + + +SL
Sbjct: 1097 G*TSMIDRAPSTGVIL*SLNPASKKIFFHSCSSRSMPSTYIMKTSNKICISL 942
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 99 GASATTWGRSMTVHL 55
GASAT GRS TVHL
Sbjct: 722 GASATI*GRSKTVHL 678
>gb|CF325956.1|CF325956 JMT1--04-L09.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-L09, mRNA sequence
Length = 697
Score = 93.2 bits (197), Expect(2) = 5e-031
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+CTV+DLPH+VAEAPA + + F GGD+F+ IP+AD ++LK +LH W +D C+KI+ C
Sbjct: 199 KCTVLDLPHIVAEAPATHSNIQFIGGDLFKFIPAADVVLLKCLLHCWQDDDCVKILRLC 375
Score = 68.9 bits (144), Expect(3) = 8e-024
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = -2 / -3
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T SIIITFPPASL IASL IL SS Q C+ HLS + SA GM SPP
Sbjct: 437 PTTTSIIITFPPASLAGIASLHSRRILTQSSSCQQCKRHLSRTTSAAGMNLKRSPP 270
Score = 67.5 bits (141), Expect(2) = 5e-031
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ +++G EREE+EW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 493 MMYIDGIEREEYEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 621
Score = 54.2 bits (112), Expect(3) = 8e-024
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / -3
Query: 501 IHHHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+ H G TSM+D P VIL*S NPA++KI HS SSRS P + + + +SL
Sbjct: 632 LQKHQG*TSMIDRAPSTGVIL*SLNPASKKIFFHSYSSRSMPSMYIMKTSNKSCISL 462
Score = 29.0 bits (57), Expect(3) = 8e-024
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 102 AGASATTWGRSMTVHL 55
AGASAT GRS TVHL
Sbjct: 245 AGASATI*GRSSTVHL 198
>ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase
ZRP4 (OSJNBa0023I19.21), mRNA
Length = 1101
Score = 93.2 bits (197), Expect(2) = 8e-031
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+CTV+DLPH+VAEAPA + + F GGD+F+ IP+AD ++LK +LH W +D C+KI+ C
Sbjct: 679 KCTVLDLPHIVAEAPATHSNIQFIGGDLFKFIPAADVVLLKCLLHCWQDDDCVKILRLC 855
Score = 68.9 bits (144), Expect(3) = 1e-022
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = -2 / -2
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T SIIITFPPASL IASL IL SS Q C+ HLS + SA GM SPP
Sbjct: 917 PTTTSIIITFPPASLAGIASLHSRRILTQSSSCQQCKRHLSRTTSAAGMNLKRSPP 750
Score = 67.5 bits (141), Expect(2) = 8e-031
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ +++G EREE+EW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 973 MMYIDGIEREEYEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1101
Score = 50.1 bits (103), Expect(3) = 1e-022
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 486 GKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
G TSM+D P VIL*S NPA++KI HS SSRS P + + + +SL
Sbjct: 1097 G*TSMIDRAPSTGVIL*SLNPASKKIFFHSYSSRSMPSMYIMKTSNKSCISL 942
Score = 29.0 bits (57), Expect(3) = 1e-022
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 102 AGASATTWGRSMTVHL 55
AGASAT GRS TVHL
Sbjct: 725 AGASATI*GRSSTVHL 678
>dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K03, full
insert sequence
Length = 1483
Score = 93.2 bits (197), Expect(2) = 1e-030
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+CTV+DLPH+VAEAPA + + F GGD+F+ IP+AD ++LK +LH W +D C+KI+ C
Sbjct: 715 KCTVLDLPHIVAEAPATHSNIQFIGGDLFKFIPAADVVLLKCLLHCWQDDDCVKILRLC 891
Score = 68.9 bits (144), Expect(3) = 8e-024
Identities = 33/56 (58%), Positives = 36/56 (64%)
Frame = -2 / -3
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T SIIITFPPASL IASL IL SS Q C+ HLS + SA GM SPP
Sbjct: 953 PTTTSIIITFPPASLAGIASLHSRRILTQSSSCQQCKRHLSRTTSAAGMNLKRSPP 786
Score = 67.5 bits (141), Expect(2) = 1e-030
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ +++G EREE+EW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 1009 MMYIDGIEREEYEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1137
Score = 54.2 bits (112), Expect(3) = 8e-024
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = -2 / -3
Query: 501 IHHHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
+ H G TSM+D P VIL*S NPA++KI HS SSRS P + + + +SL
Sbjct: 1148 LQKHQG*TSMIDRAPSTGVIL*SLNPASKKIFFHSYSSRSMPSMYIMKTSNKSCISL 978
Score = 29.0 bits (57), Expect(3) = 8e-024
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -2 / -3
Query: 102 AGASATTWGRSMTVHL 55
AGASAT GRS TVHL
Sbjct: 761 AGASATI*GRSSTVHL 714
>ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4008077
Score = 71.6 bits (150), Expect(3) = 3e-030
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / -2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 1124500 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1124342
Score = 66.1 bits (138), Expect(3) = 3e-030
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK
Sbjct: 1124873 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLK 1124751
Score = 35.9 bits (72), Expect(3) = 3e-030
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / -2
Query: 176 KWILHDWDEDKCIKIMERC 232
++ILH W +D C+KI+ RC
Sbjct: 1124644 QYILHAWQDDDCVKILRRC 1124588
>gb|CH401243.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000080 genomic
scaffold, whole genome shotgun sequence
Length = 3249876
Score = 71.6 bits (150), Expect(3) = 3e-030
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / -1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 1255668 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1255510
Score = 66.1 bits (138), Expect(3) = 3e-030
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK
Sbjct: 1256041 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLK 1255919
Score = 35.9 bits (72), Expect(3) = 3e-030
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 176 KWILHDWDEDKCIKIMERC 232
++ILH W +D C+KI+ RC
Sbjct: 1255812 QYILHAWQDDDCVKILRRC 1255756
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
Pseudo10p0.0-10p4.4, complete sequence
Length = 2331000
Score = 71.6 bits (150), Expect(3) = 3e-030
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / -3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 1119361 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 1119203
Score = 66.1 bits (138), Expect(3) = 3e-030
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2 / -2
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK
Sbjct: 1119734 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLK 1119612
Score = 35.9 bits (72), Expect(3) = 3e-030
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / -3
Query: 176 KWILHDWDEDKCIKIMERC 232
++ILH W +D C+KI+ RC
Sbjct: 1119505 QYILHAWQDDDCVKILRRC 1119449
>gb|AACV01020695.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg020695, whole
genome shotgun sequence
Length = 31515
Score = 71.6 bits (150), Expect(3) = 4e-030
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2 / -1
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+E +L + +V+G EREEHEW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 27627 KEMQILFDVFMMYVDGIEREEHEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 27469
Score = 66.1 bits (138), Expect(3) = 4e-030
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
+CTV+DLPH+VAEAP + + F GGD FE IP+AD ++LK
Sbjct: 28000 KCTVLDLPHIVAEAPTTHSNIQFVGGDFFEFIPAADVVLLK 27878
Score = 35.9 bits (72), Expect(3) = 4e-030
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 176 KWILHDWDEDKCIKIMERC 232
++ILH W +D C+KI+ RC
Sbjct: 27771 QYILHAWQDDDCVKILRRC 27715
>dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G03, full
insert sequence
Length = 1357
Score = 74.4 bits (156), Expect(3) = 9e-025
Identities = 35/55 (63%), Positives = 39/55 (70%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
P+T+S+IITFPP SL IA LQ ILM SS QSCR HL +ASA G SNMSP
Sbjct: 934 PTTISMIITFPPLSLGGIAFLQFFNILMQSSSPQSCRTHLRKTASAGGTLSNMSP 770
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +P ADA+ LKW+LHDW +D CIKI++ C
Sbjct: 756 VEYIAGDMFESVPPADAVFLKWVLHDWGDDDCIKILKNC 872
Score = 62.9 bits (131), Expect(3) = 2e-029
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
RE L + FVNG ER+E EW+++F+ AGF YKI G S+IEV+P*
Sbjct: 960 REVQALFDMYIMFVNGIERDEQEWKKVFMGAGFSGYKIMPVLGFRSMIEVYP* 1118
Score = 49.6 bits (102), Expect(3) = 9e-025
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = -2 / -1
Query: 495 HHHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
H G TS++D PR +IL NPA K HSCSS S P T + +N SL
Sbjct: 1123 HLQGYTSIIDLKPRTGIILYPLNPAPIKTFFHSCSSLSMPLTNMMYISNNACTSL 959
Score = 39.1 bits (79), Expect(3) = 2e-029
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGT 109
RC+VMDL HVVA+APAGT
Sbjct: 699 RCSVMDLGHVVAKAPAGT 752
Score = 31.3 bits (62), Expect(3) = 9e-025
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / -1
Query: 111 AVPAGASATTWGRSMTVHL 55
+VPAGA ATT RS+T+HL
Sbjct: 754 SVPAGALATTCPRSITLHL 698
>dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134H21, full
insert sequence
Length = 1466
Score = 74.8 bits (157), Expect(3) = 5e-025
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = -2 / -1
Query: 294 PSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSPP 127
P+T S+ ITFPPASL IASL R IIL S Q C+IHLS + SA GM S SPP
Sbjct: 947 PTTTSMSITFPPASLAEIASLHRRIILTQSSCCQQCKIHLSSTTSAAGMNSKRSPP 780
Score = 68.0 bits (142), Expect(3) = 8e-029
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 1003 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 1131
Score = 65.7 bits (137), Expect(3) = 8e-029
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ F GGD+FE IP+AD ++LK ILH W D C+KIM RC + V+G
Sbjct: 769 IQFVGGDLFEFIPAADVVLLKCILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 948
Score = 57.4 bits (119), Expect(3) = 5e-025
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = -2 / -1
Query: 492 HHGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSNTYVSL 331
H G TSM+D P +IL*S NPA++KI HSCSSRS P + + +SL
Sbjct: 1133 HQG*TSMIDRTPSTGMIL*SLNPASKKIFFHSCSSRSMPSVYIMKTSKRSCISL 972
Score = 35.4 bits (71), Expect(3) = 8e-029
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 712 KCTVLDLPHIVAKAPS 759
Score = 24.0 bits (46), Expect(3) = 5e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 99 GASATTWGRSMTVHL 55
GA AT GRS TVHL
Sbjct: 755 GALATM*GRSNTVHL 711
>gb|AACV01002364.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002364, whole
genome shotgun sequence
Length = 18749
Score = 90.9 bits (192), Expect(2) = 1e-028
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGSRAXXXXXXKTCRETYV 346
L L+WILH W +++C++I+ RC D V+GS + + +
Sbjct: 2557 LFLQWILHGWGDEECVRILRRCREAVPAREDGRRVIVMDLVVGSSSSLGDGARDTETQLL 2378
Query: 347 LDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
D+ ++ V ER+E E+ +IF AGF YKI H GI S+IEV+P*
Sbjct: 2377 WDVMMMGVVGSPERDEREFCKIFHDAGFSGYKILHVLGIRSVIEVYP* 2234
Score = 66.6 bits (139), Expect(2) = 1e-028
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
RCTV++LP VVA P G G+ F GDMF+H+P ADA++LK
Sbjct: 2927 RCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLK 2805
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0503C12
Length = 147180
Score = 90.9 bits (192), Expect(2) = 9e-028
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = +2 / +2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGSRAXXXXXXKTCRETYV 346
L L+WILH W +++C++I+ RC D V+GS + + +
Sbjct: 18800 LFLQWILHGWGDEECVRILRRCREAVPAREDGRRVIVMDLVVGSSSSLGDGARDTETQLL 18979
Query: 347 LDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
D+ ++ V ER+E E+ +IF AGF YKI H GI S+IEV+P*
Sbjct: 18980 WDVMMMGVVGSPERDEREFCKIFHDAGFSGYKILHVLGIRSVIEVYP* 19123
Score = 66.6 bits (139), Expect(2) = 9e-028
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
RCTV++LP VVA P G G+ F GDMF+H+P ADA++LK
Sbjct: 18430 RCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLK 18552
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0435B05
Length = 150997
Score = 90.9 bits (192), Expect(2) = 1e-027
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = +2 / +2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGSRAXXXXXXKTCRETYV 346
L L+WILH W +++C++I+ RC D V+GS + + +
Sbjct: 118091 LFLQWILHGWGDEECVRILRRCREAVPAREDGRRVIVMDLVVGSSSSLGDGARDTETQLL 118270
Query: 347 LDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
D+ ++ V ER+E E+ +IF AGF YKI H GI S+IEV+P*
Sbjct: 118271 WDVMMMGVVGSPERDEREFCKIFHDAGFSGYKILHVLGIRSVIEVYP* 118414
Score = 66.6 bits (139), Expect(2) = 1e-027
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
RCTV++LP VVA P G G+ F GDMF+H+P ADA++LK
Sbjct: 117721 RCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLK 117843
>ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1083
Score = 73.0 bits (153), Expect(3) = 3e-021
Identities = 35/56 (62%), Positives = 40/56 (71%)
Frame = -2 / -2
Query: 297 DPSTVSIIITFPPASLPPIASLQRSIILMHLSSSQSCRIHLSMSASADGMCSNMSP 130
DP+T S+ +TFPPASL IASL R I M SS QSCR +LS SASA GM S +SP
Sbjct: 902 DPTTTSMTMTFPPASLEGIASLHRFSIFMQSSSLQSCRTNLSRSASARGMKSIISP 735
Score = 67.0 bits (140), Expect(4) = 4e-027
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ F GDM + IP ADAL+LK++LHDW ++ C+KI++RC D V+G
Sbjct: 721 VKFVAGDMMDFIPRADALLLKFVLHDWSDEDCMKILKRCKEAIPSREAGGKVIVIDVVVG 900
Query: 296 S 298
S
Sbjct: 901 S 903
Score = 57.9 bits (120), Expect(4) = 4e-027
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 344 VLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ DL I + + G +R E EW ++F AGF DYKI+ GI SIIEVFP*
Sbjct: 937 LFDLLISTTLPGMQRGEKEWCKVFKEAGFTDYKISPVLGIRSIIEVFP* 1083
Score = 43.7 bits (89), Expect(3) = 3e-021
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = -2 / -2
Query: 489 HGKTSMMDGMPRVCVIL*SRNPAARKILLHSCSSRSAPFTKLSMWRSN 346
+GKTS+MD +P +IL*S NPA+ L HS S P + + RSN
Sbjct: 1082 YGKTSIMDRIPNTGLIL*SVNPASLNTLHHSFSPLCMPGNVVEISRSN 939
Score = 32.2 bits (64), Expect(4) = 4e-027
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAG 115
+CTV+DLPHV+ PA G
Sbjct: 652 KCTVLDLPHVIDSIPADHRG 711
Score = 26.7 bits (52), Expect(3) = 3e-021
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 117 RPAVPAGASATTWGRSMTVHL 55
RP AG + T GRS TVHL
Sbjct: 713 RPRWSAGMESIT*GRSSTVHL 651
Score = 23.5 bits (45), Expect(4) = 4e-027
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2 / +1
Query: 2 GGRGTXXXXXXXXFPHIQ 55
GG GT FPHI+
Sbjct: 601 GGTGTAARVVAAAFPHIK 654
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 90.9 bits (192), Expect(2) = 8e-026
Identities = 38/108 (35%), Positives = 57/108 (52%)
Frame = +2 / +2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGSRAXXXXXXKTCRETYV 346
L L+WILH W +++C++I+ RC D V+GS + + +
Sbjct: 6133121 LFLQWILHGWGDEECVRILRRCREAVPAREDGRRVIVMDLVVGSSSSLGDGARDTETQLL 6133300
Query: 347 LDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
D+ ++ V ER+E E+ +IF AGF YKI H GI S+IEV+P*
Sbjct: 6133301 WDVMMMGVVGSPERDEREFCKIFHDAGFSGYKILHVLGIRSVIEVYP* 6133444
Score = 66.6 bits (139), Expect(2) = 8e-026
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
RCTV++LP VVA P G G+ F GDMF+H+P ADA++LK
Sbjct: 6132751 RCTVLELPQVVATVPPGDGGVEFVAGDMFDHVPKADAVLLK 6132873
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079
genomic scaffold, whole genome shotgun sequence
Length = 12069826
Score = 68.0 bits (142), Expect(4) = 5e-025
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / -3
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 143210 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 143082
Score = 35.4 bits (71), Expect(4) = 5e-025
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 143602 KCTVLDLPHIVAKAPS 143555
Score = 35.0 bits (70), Expect(4) = 5e-025
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2 / -3
Query: 182 ILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
ILH W D C+KIM RC + V+G
Sbjct: 143378 ILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 143265
Score = 34.5 bits (69), Expect(4) = 5e-025
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ F GGD+FE IP+AD ++LK
Sbjct: 143545 IQFVGGDLFEFIPAADVVLLK 143483
>ref|NT_107081.1| Oryza sativa (japonica cultivar-group)
Length = 2169725
Score = 68.0 bits (142), Expect(4) = 5e-025
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / -3
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 1491468 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 1491340
Score = 35.4 bits (71), Expect(4) = 5e-025
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 1491860 KCTVLDLPHIVAKAPS 1491813
Score = 35.0 bits (70), Expect(4) = 5e-025
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2 / -3
Query: 182 ILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
ILH W D C+KIM RC + V+G
Sbjct: 1491636 ILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 1491523
Score = 34.5 bits (69), Expect(4) = 5e-025
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ F GGD+FE IP+AD ++LK
Sbjct: 1491803 IQFVGGDLFEFIPAADVVLLK 1491741
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBb0057I13
Length = 156330
Score = 68.0 bits (142), Expect(4) = 6e-025
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / -2
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 140267 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 140139
Score = 35.4 bits (71), Expect(4) = 6e-025
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 140659 KCTVLDLPHIVAKAPS 140612
Score = 35.0 bits (70), Expect(4) = 6e-025
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2 / -2
Query: 182 ILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
ILH W D C+KIM RC + V+G
Sbjct: 140435 ILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 140322
Score = 34.5 bits (69), Expect(4) = 6e-025
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ F GGD+FE IP+AD ++LK
Sbjct: 140602 IQFVGGDLFEFIPAADVVLLK 140540
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OSJNBb0085I16
Length = 141701
Score = 68.0 bits (142), Expect(4) = 6e-025
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / -3
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 24573 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 24445
Score = 35.4 bits (71), Expect(4) = 6e-025
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 24965 KCTVLDLPHIVAKAPS 24918
Score = 35.0 bits (70), Expect(4) = 6e-025
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2 / -3
Query: 182 ILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
ILH W D C+KIM RC + V+G
Sbjct: 24741 ILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 24628
Score = 34.5 bits (69), Expect(4) = 6e-025
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ F GGD+FE IP+AD ++LK
Sbjct: 24908 IQFVGGDLFEFIPAADVVLLK 24846
>gb|AACV01019708.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019708, whole
genome shotgun sequence
Length = 61228
Score = 68.0 bits (142), Expect(4) = 6e-025
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2 / -1
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ + +G EREEHEW++IFL AGF DYKI G+ SIIEV+P*
Sbjct: 28966 MMYTDGIEREEHEWKKIFLEAGFSDYKIIPVLGVRSIIEVYP* 28838
Score = 35.4 bits (71), Expect(4) = 6e-025
Identities = 11/16 (68%), Positives = 16/16 (100%)
Frame = +2 / -2
Query: 56 RCTVMDLPHVVAEAPA 103
+CTV+DLPH+VA+AP+
Sbjct: 29358 KCTVLDLPHIVAKAPS 29311
Score = 35.0 bits (70), Expect(4) = 6e-025
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2 / -1
Query: 182 ILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
ILH W D C+KIM RC + V+G
Sbjct: 29134 ILHCWQHDDCVKIMRRCKEAISARDAGGKVILIEVVVG 29021
Score = 34.5 bits (69), Expect(4) = 6e-025
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 116 LSFHGGDMFEHIPSADALMLK 178
+ F GGD+FE IP+AD ++LK
Sbjct: 29301 IQFVGGDLFEFIPAADVVLLK 29239
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
insert sequence
Length = 1300
Score = 81.7 bits (172), Expect(2) = 1e-024
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCX 235
+CTV+DLP V+ AP + + GDMF +IP A A++LK++L W +D C+KI+ +C
Sbjct: 772 KCTVLDLPQVIGTAPVADGAVDYVAGDMFSYIPPAQAVLLKYVLSHWSDDDCVKILAQCK 951
Query: 236 XXXXXXXXXXXXXXXDTVLGS 298
D V+G+
Sbjct: 952 KAIPSREAGGKVIIKDVVVGT 1014
Score = 55.6 bits (115), Expect(2) = 1e-024
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2 / +1
Query: 344 VLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
++D+ ++ +G ER+ EWR IF AGF DYKI + G +IEV+P*
Sbjct: 1045 LMDMAMMVMTSGRERD*QEWREIFTNAGFSDYKIMNKLGARCVIEVYP* 1191
>gb|AACV01020697.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg020697, whole
genome shotgun sequence
Length = 14016
Score = 67.5 bits (141), Expect(3) = 5e-024
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +3
Query: 362 LSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ +++G EREE+EW++IFL AGF DYKIT G SIIEV+P*
Sbjct: 2646 MMYIDGIEREEYEWKKIFLEAGFSDYKITPVLGARSIIEVYP* 2774
Score = 67.0 bits (140), Expect(3) = 5e-024
Identities = 24/41 (58%), Positives = 34/41 (82%)
Frame = +2 / +3
Query: 56 RCTVMDLPHVVAEAPAGTAGLSFHGGDMFEHIPSADALMLK 178
+CTV+DLPH+VAEAPA + + F GGD+F+ IP+AD ++LK
Sbjct: 2265 KCTVLDLPHIVAEAPATHSNIQFIGGDLFKFIPAADVVLLK 2387
Score = 29.9 bits (59), Expect(3) = 5e-024
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 182 ILHDWDEDKCIKIMERC 232
+LH W +D C+KI+ C
Sbjct: 2478 LLHCWQDDDCVKILRLC 2528
>gb|AU101176.1|AU101176 AU101176 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2190, mRNA sequence
Length = 609
Score = 68.9 bits (144), Expect(2) = 5e-023
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2 / +3
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDMFE +P ADA+ LKW+LHDW +D CIKI++ C
Sbjct: 48 VEYIAGDMFESVPPADAVFLKWVLHDWGDDDCIKILKNC 164
Score = 62.9 bits (131), Expect(2) = 5e-023
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2 / +3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
RE L + FVNG ER+E EW+++F+ AGF YKI G S+IEV+P*
Sbjct: 252 REVQALFDMYIMFVNGIERDEQEWKKVFMGAGFSGYKIMPVLGFRSMIEVYP* 410
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 65.7 bits (137), Expect(4) = 9e-023
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + + G EREEHEW++IF AGF DYKI G S+IEV+P*
Sbjct: 7296611 KETQVLFDVYMMGIGGGEREEHEWKKIFFEAGFSDYKIKPILGFISVIEVYP* 7296453
Score = 39.6 bits (80), Expect(4) = 9e-023
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGS 298
++ K++LH W E+ CIKI+++C +TV+GS
Sbjct: 7296767 IIFKYVLHCWGEEDCIKILQQCKKAIPARGDGGKVIIINTVVGS 7296636
Score = 29.9 bits (59), Expect(4) = 9e-023
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
++F G+MFE+IP A+A+ LK
Sbjct: 7296940 VNFVAGNMFEYIPPANAVFLK 7296878
Score = 29.9 bits (59), Expect(4) = 9e-023
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPA 103
+C+V+DLP ++EAPA
Sbjct: 7296997 KCSVLDLPQAISEAPA 7296950
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 65.7 bits (137), Expect(4) = 9e-023
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / -3
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + + G EREEHEW++IF AGF DYKI G S+IEV+P*
Sbjct: 3008861 KETQVLFDVYMMGIGGGEREEHEWKKIFFEAGFSDYKIKPILGFISVIEVYP* 3008703
Score = 39.6 bits (80), Expect(4) = 9e-023
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / -3
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGS 298
++ K++LH W E+ CIKI+++C +TV+GS
Sbjct: 3009017 IIFKYVLHCWGEEDCIKILQQCKKAIPARGDGGKVIIINTVVGS 3008886
Score = 29.9 bits (59), Expect(4) = 9e-023
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 116 LSFHGGDMFEHIPSADALMLK 178
++F G+MFE+IP A+A+ LK
Sbjct: 3009190 VNFVAGNMFEYIPPANAVFLK 3009128
Score = 29.9 bits (59), Expect(4) = 9e-023
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 56 RCTVMDLPHVVAEAPA 103
+C+V+DLP ++EAPA
Sbjct: 3009247 KCSVLDLPQAISEAPA 3009200
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0001B11
Length = 166004
Score = 65.7 bits (137), Expect(4) = 1e-022
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + + G EREEHEW++IF AGF DYKI G S+IEV+P*
Sbjct: 23866 KETQVLFDVYMMGIGGGEREEHEWKKIFFEAGFSDYKIKPILGFISVIEVYP* 23708
Score = 39.6 bits (80), Expect(4) = 1e-022
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGS 298
++ K++LH W E+ CIKI+++C +TV+GS
Sbjct: 24022 IIFKYVLHCWGEEDCIKILQQCKKAIPARGDGGKVIIINTVVGS 23891
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
++F G+MFE+IP A+A+ LK
Sbjct: 24195 VNFVAGNMFEYIPPANAVFLK 24133
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPA 103
+C+V+DLP ++EAPA
Sbjct: 24252 KCSVLDLPQAISEAPA 24205
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0052G07
Length = 156207
Score = 65.7 bits (137), Expect(4) = 1e-022
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + + G EREEHEW++IF AGF DYKI G S+IEV+P*
Sbjct: 152285 KETQVLFDVYMMGIGGGEREEHEWKKIFFEAGFSDYKIKPILGFISVIEVYP* 152127
Score = 39.6 bits (80), Expect(4) = 1e-022
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGS 298
++ K++LH W E+ CIKI+++C +TV+GS
Sbjct: 152441 IIFKYVLHCWGEEDCIKILQQCKKAIPARGDGGKVIIINTVVGS 152310
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
++F G+MFE+IP A+A+ LK
Sbjct: 152614 VNFVAGNMFEYIPPANAVFLK 152552
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPA 103
+C+V+DLP ++EAPA
Sbjct: 152671 KCSVLDLPQAISEAPA 152624
>gb|AACV01013392.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013392, whole
genome shotgun sequence
Length = 7686
Score = 65.7 bits (137), Expect(4) = 1e-022
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +2 / -2
Query: 332 RETYVLDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
+ET VL + + G EREEHEW++IF AGF DYKI G S+IEV+P*
Sbjct: 4940 KETQVLFDVYMMGIGGGEREEHEWKKIFFEAGFSDYKIKPILGFISVIEVYP* 4782
Score = 39.6 bits (80), Expect(4) = 1e-022
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2 / -2
Query: 167 LMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLGS 298
++ K++LH W E+ CIKI+++C +TV+GS
Sbjct: 5096 IIFKYVLHCWGEEDCIKILQQCKKAIPARGDGGKVIIINTVVGS 4965
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 116 LSFHGGDMFEHIPSADALMLK 178
++F G+MFE+IP A+A+ LK
Sbjct: 5269 VNFVAGNMFEYIPPANAVFLK 5207
Score = 29.9 bits (59), Expect(4) = 1e-022
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 56 RCTVMDLPHVVAEAPA 103
+C+V+DLP ++EAPA
Sbjct: 5326 KCSVLDLPQAISEAPA 5279
>ref|XM_481333.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1305
Score = 64.3 bits (134), Expect(4) = 8e-022
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ + GDM E IP DA++LK+ILHDW+++ C+KI+++C D V+G
Sbjct: 800 IEYIAGDMMEQIPPTDAVLLKYILHDWNDEDCVKILKQCRNAIHAQKPGGKVIIIDIVVG 979
Query: 296 S 298
S
Sbjct: 980 S 982
Score = 52.4 bits (108), Expect(4) = 8e-022
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2 / +2
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
DL ++ +G ER++HEW +IF+ AGF YK G +I E++P*
Sbjct: 1019 DLLMMVITSGKERDQHEWHKIFMDAGFSHYKTRPVLGFLAITELYP* 1159
Score = 23.1 bits (44), Expect(4) = 8e-022
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2 / +2
Query: 2 GGRGTXXXXXXXXFPHIQ 55
GG GT FPHI+
Sbjct: 692 GGTGTTARDIAKAFPHIK 745
Score = 22.6 bits (43), Expect(4) = 8e-022
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVV 88
+C+V+DLP+V+
Sbjct: 743 KCSVLDLPNVI 775
>ref|XM_480279.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1116
Score = 62.5 bits (130), Expect(3) = 8e-022
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +2 / +1
Query: 347 LDLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
LDL +++ G EREE EW IFL AGF YKI GI S+IEV+P*
Sbjct: 973 LDLCMMTVTTGKEREEKEWHMIFLKAGFTQYKILPILGIKSLIEVYP* 1116
Score = 54.2 bits (112), Expect(3) = 8e-022
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERC 232
+ + GDM + +P A+ ++LK +LHDW ++ C++I+ RC
Sbjct: 760 VEYVAGDMMDFVPPANVVLLKLVLHDWSDEDCVRILSRC 876
Score = 28.6 bits (56), Expect(3) = 8e-022
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 56 RCTVMDLPHVVAEAPA 103
+C V+DLPHVV PA
Sbjct: 703 KCLVLDLPHVVRGIPA 750
>dbj|AK071201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D24, full
insert sequence
Length = 1305
Score = 62.5 bits (130), Expect(4) = 3e-021
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2 / +2
Query: 116 LSFHGGDMFEHIPSADALMLKWILHDWDEDKCIKIMERCXXXXXXXXXXXXXXXXDTVLG 295
+ + GDM E IP DA++LK+ILHDW ++ C+KI+++C D V+G
Sbjct: 800 IEYIAGDMMEQIPPTDAVLLKYILHDWYDEDCVKILKQCRNAIHAQKPGGKVIIIDIVVG 979
Query: 296 S 298
S
Sbjct: 980 S 982
Score = 52.4 bits (108), Expect(4) = 3e-021
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2 / +2
Query: 350 DLHILSFVNGAEREEHEWRRIFLAAGFRDYKITHTRGIPSIIEVFP* 490
DL ++ +G ER++HEW +IF+ AGF YK G +I E++P*
Sbjct: 1019 DLLMMVITSGKERDQHEWHKIFMDAGFSHYKTRPVLGFLAITELYP* 1159
Score = 23.1 bits (44), Expect(4) = 3e-021
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2 / +2
Query: 2 GGRGTXXXXXXXXFPHIQ 55
GG GT FPHI+
Sbjct: 692 GGTGTTARDIAKAFPHIK 745
Score = 22.6 bits (43), Expect(4) = 3e-021
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 56 RCTVMDLPHVV 88
+C+V+DLP+V+
Sbjct: 743 KCSVLDLPNVI 775
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,220,754,554
Number of Sequences: 438736
Number of extensions: 64747354
Number of successful extensions: 370508
Number of sequences better than 1.0e-020: 38
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 168811345866
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)