TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724812.2.1
(804 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 232 8e-062
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 232 8e-062
gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (j... 232 9e-062
gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (j... 232 5e-059
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 232 5e-059
dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA... 188 4e-049
ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA 188 4e-049
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 123 5e-030
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 123 5e-030
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 123 5e-030
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 123 6e-030
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 116 4e-029
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 116 4e-029
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 116 5e-029
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 116 5e-029
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 106 3e-028
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 106 3e-028
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 123 7e-028
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 120 3e-027
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 120 3e-027
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 120 3e-027
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 120 3e-027
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 120 3e-027
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 123 2e-026
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 123 2e-026
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-026
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-026
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 123 2e-026
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-025
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-025
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 120 2e-025
dbj|AP006525.2| Oryza sativa (japonica cultivar-group) geno... 112 9e-025
dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA... 112 1e-024
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 111 1e-024
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 111 1e-024
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 111 1e-024
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 111 1e-024
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 111 1e-024
dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA... 104 2e-024
gb|AQ860883.1|AQ860883 nbeb0015L24f CUGI Rice BAC Library (... 111 2e-024
gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (... 106 2e-024
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 109 3e-024
gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) c... 109 3e-024
ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 109 3e-024
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 116 4e-024
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 116 4e-024
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 116 4e-024
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 104 1e-023
gb|AACV01005441.1| Oryza sativa (japonica cultivar-group) c... 104 1e-023
ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-... 104 1e-023
dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA... 104 1e-023
ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA 104 1e-023
gb|AQ913482.1|AQ913482 nbeb0041B12r CUGI Rice BAC Library (... 104 1e-023
gb|AQ861812.1|AQ861812 nbeb0017J05r CUGI Rice BAC Library (... 104 1e-023
ref|XM_474835.1| Oryza sativa (japonica cultivar-group), p... 108 2e-023
gb|AACV01009341.1| Oryza sativa (japonica cultivar-group) c... 101 3e-023
gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbar... 97 4e-023
gb|AC131374.1| Oryza sativa (japonica cultivar-group) chrom... 97 4e-023
gb|AACV01021221.1| Oryza sativa (japonica cultivar-group) c... 97 4e-023
ref|NM_195768.1| Oryza sativa (japonica cultivar-group) put... 97 4e-023
dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA... 112 5e-023
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 107 8e-023
dbj|AK103242.1| Oryza sativa (japonica cultivar-group) cDNA... 105 8e-023
dbj|AK105967.1| Oryza sativa (japonica cultivar-group) cDNA... 105 8e-023
ref|XM_474841.1| Oryza sativa (japonica cultivar-group), p... 105 8e-023
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 107 8e-023
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 107 8e-023
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 107 8e-023
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 107 8e-023
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 107 8e-023
gb|CB672602.1|CB672602 OSJNEe06L11.r OSJNEe Oryza sativa (j... 105 8e-023
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 107 8e-023
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 107 8e-023
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 107 8e-023
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 107 8e-023
gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (j... 107 8e-023
gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (j... 107 8e-023
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 106 1e-022
ref|NM_195769.1| Oryza sativa (japonica cultivar-group) put... 96 1e-022
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 105 1e-022
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 105 1e-022
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 111 1e-022
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 111 1e-022
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 111 1e-022
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 111 1e-022
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 105 1e-022
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 105 1e-022
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 105 1e-022
emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromoso... 101 2e-022
ref|XM_471860.1| Oryza sativa (japonica cultivar-group), p... 100 2e-022
dbj|AK106302.1| Oryza sativa (japonica cultivar-group) cDNA... 104 2e-022
ref|XM_474840.1| Oryza sativa (japonica cultivar-group), p... 104 2e-022
gb|AQ577711.1|AQ577711 nbxb0091F07r CUGI Rice BAC Library O... 100 2e-022
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 109 2e-022
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 102 2e-022
gb|AC146522.2| Oryza sativa (japonica cultivar-group) chrom... 102 3e-022
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 100 3e-022
gb|AACV01008641.1| Oryza sativa (japonica cultivar-group) c... 102 3e-022
gb|AACV01021220.1| Oryza sativa (japonica cultivar-group) c... 95 3e-022
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 100 3e-022
dbj|AK060146.1| Oryza sativa (japonica cultivar-group) cDNA... 95 3e-022
ref|NM_186798.1| Oryza sativa (japonica cultivar-group), mRNA 100 3e-022
ref|NM_195766.1| Oryza sativa (japonica cultivar-group) hyp... 95 3e-022
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 109 4e-022
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 109 4e-022
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 109 4e-022
dbj|AK107239.1| Oryza sativa (japonica cultivar-group) cDNA... 100 4e-022
ref|XM_477222.1| Oryza sativa (japonica cultivar-group), mRNA 100 4e-022
gb|AACV01021222.1| Oryza sativa (japonica cultivar-group) c... 94 5e-022
gb|AQ159266.1|AQ159266 nbxb0013E02r CUGI Rice BAC Library O... 100 5e-022
gb|CF317485.1|CF317485 HD--07-D05.g1 OsHDAC1-overexpressing... 103 5e-022
dbj|AP005501.3| Oryza sativa (japonica cultivar-group) geno... 108 7e-022
dbj|AP004560.3| Oryza sativa (japonica cultivar-group) geno... 108 7e-022
ref|XM_480272.1| Oryza sativa (japonica cultivar-group), mRNA 108 7e-022
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 108 7e-022
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 108 7e-022
dbj|AP004341.2| Oryza sativa (japonica cultivar-group) geno... 93 8e-022
dbj|AP003744.1| Oryza sativa (japonica cultivar-group) chro... 93 8e-022
gb|AACV01016816.1| Oryza sativa (japonica cultivar-group) c... 93 9e-022
gb|AC146523.2| Oryza sativa (japonica cultivar-group) chrom... 100 9e-022
gb|AACV01005389.1| Oryza sativa (japonica cultivar-group) c... 100 9e-022
dbj|AK108114.1| Oryza sativa (japonica cultivar-group) cDNA... 93 9e-022
ref|XM_479187.1| Oryza sativa (japonica cultivar-group), mRNA 93 9e-022
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 97 1e-021
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 97 1e-021
gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 ... 99 1e-021
ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA 99 1e-021
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 89 3e-021
gb|AACV01004762.1| Oryza sativa (japonica cultivar-group) c... 89 3e-021
ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA 89 3e-021
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 97 6e-021
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 97 6e-021
gb|AACV01009340.1| Oryza sativa (japonica cultivar-group) c... 101 6e-021
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 97 6e-021
ref|XM_471859.1| Oryza sativa (japonica cultivar-group), p... 101 6e-021
emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromoso... 100 8e-021
gb|AACV01009342.1| Oryza sativa (japonica cultivar-group) c... 100 8e-021
dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA... 95 8e-021
ref|XM_467864.1| Oryza sativa (japonica cultivar-group), mRNA 95 8e-021
ref|XM_471823.1| Oryza sativa (japonica cultivar-group), p... 100 8e-021
gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (j... 98 9e-021
gb|CA754538.1|CA754538 BR030001000_PLATE_C03_19_020.ab1 OA ... 105 9e-021
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 105 9e-021
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 105 9e-021
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 232 bits (500), Expect(2) = 8e-062
Identities = 92/145 (63%), Positives = 102/145 (70%)
Frame = +3 / -2
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 261241 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 261062
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLRGPLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXX 386
FPQWGDQCTDA FLVDELGMGVRLR PL GP+A
Sbjct: 261061 FPQWGDQCTDAMFLVDELGMGVRLRAPLRRGAVRDAVDAAVAGPDAGAMRSSAAAWSAAA 260882
Query: 387 XXXXXPGGSSDAHVQAFVDEVSRRA 461
GGSSD HV+AFV+EV RA
Sbjct: 260881 RAAVAAGGSSDRHVEAFVEEVKARA 260807
Score = 166 bits (358), Expect = 2e-039
Identities = 69/108 (63%), Positives = 70/108 (64%)
Frame = +1 / -3
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 261237 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 261058
Query: 211 RSGATSARTPSSWWTSSGWVSASAGRCGGTPCGRRWTPQWRGPRPTRC 354
RSG TSA TP S TSSGW SASA RCG PC TP WRGP P RC
Sbjct: 261057 RSGGTSAPTPCSSSTSSGWASASARRCGAAPCATPSTPPWRGPTPARC 260914
Score = 158 bits (340), Expect = 6e-037
Identities = 69/108 (63%), Positives = 76/108 (70%)
Frame = -2 / +2
Query: 353 HRVGLGPRHCGVHRLPHGVPPQRPAEADTHPELVHQELGVRALVAPLREGHHGHARRDGL 174
HR G+GPRH GV + HG PQR AEAD HPELV +E GV ALV PLRE HH HA D L
Sbjct: 260915 HRAGVGPRHGGVDGVAHGAAPQRRAEADAHPELVDEEHGVGALVPPLRERHHRHAGGDRL 261094
Query: 173 QGGVPPAVREEAGGGRVRQHAVLGAPRHHRAAPGHGVQEPVRQQRPGV 30
Q VP AVREEA G V +H +LGAP HH AA G GV+EP+RQQR V
Sbjct: 261095 QRRVPAAVREEARHGGVDEHLLLGAPWHHHAAAGDGVEEPLRQQRAAV 261238
Score = 116 bits (249), Expect = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / +3
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 261024 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 261200
Score = 29.9 bits (59), Expect(2) = 8e-062
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWVVRP
Sbjct: 261268 GRPFLWVVRP 261239
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1145_F01
Length = 113755
Score = 232 bits (500), Expect(2) = 8e-062
Identities = 92/145 (63%), Positives = 102/145 (70%)
Frame = +3 / -3
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 33908 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 33729
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLRGPLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXX 386
FPQWGDQCTDA FLVDELGMGVRLR PL GP+A
Sbjct: 33728 FPQWGDQCTDAMFLVDELGMGVRLRAPLRRGAVRDAVDAAVAGPDAGAMRSSAAAWSAAA 33549
Query: 387 XXXXXPGGSSDAHVQAFVDEVSRRA 461
GGSSD HV+AFV+EV RA
Sbjct: 33548 RAAVAAGGSSDRHVEAFVEEVKARA 33474
Score = 166 bits (358), Expect = 2e-039
Identities = 69/108 (63%), Positives = 70/108 (64%)
Frame = +1 / -1
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 33904 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 33725
Query: 211 RSGATSARTPSSWWTSSGWVSASAGRCGGTPCGRRWTPQWRGPRPTRC 354
RSG TSA TP S TSSGW SASA RCG PC TP WRGP P RC
Sbjct: 33724 RSGGTSAPTPCSSSTSSGWASASARRCGAAPCATPSTPPWRGPTPARC 33581
Score = 158 bits (340), Expect(2) = 3e-039
Identities = 69/108 (63%), Positives = 76/108 (70%)
Frame = -2 / +3
Query: 353 HRVGLGPRHCGVHRLPHGVPPQRPAEADTHPELVHQELGVRALVAPLREGHHGHARRDGL 174
HR G+GPRH GV + HG PQR AEAD HPELV +E GV ALV PLRE HH HA D L
Sbjct: 33582 HRAGVGPRHGGVDGVAHGAAPQRRAEADAHPELVDEEHGVGALVPPLRERHHRHAGGDRL 33761
Query: 173 QGGVPPAVREEAGGGRVRQHAVLGAPRHHRAAPGHGVQEPVRQQRPGV 30
Q VP AVREEA G V +H +LGAP HH AA G GV+EP+RQQR V
Sbjct: 33762 QRRVPAAVREEARHGGVDEHLLLGAPWHHHAAAGDGVEEPLRQQRAAV 33905
Score = 116 bits (249), Expect = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / +1
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 33691 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 33867
Score = 29.9 bits (59), Expect(2) = 8e-062
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -3
Query: 1 GRPFLWVVRP 30
GRPFLWVVRP
Sbjct: 33935 GRPFLWVVRP 33906
Score = 27.6 bits (54), Expect(2) = 3e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 460 ARRDTSSTNAWTCASEDPP 404
AR TSSTNA T S++PP
Sbjct: 33475 ARAFTSSTNASTWRSDEPP 33531
>gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05D17 3', mRNA sequence
Length = 695
Score = 232 bits (500), Expect(2) = 9e-062
Identities = 92/145 (63%), Positives = 102/145 (70%)
Frame = +3 / -2
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 601 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 422
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLRGPLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXX 386
FPQWGDQCTDA FLVDELGMGVRLR PL GP+A
Sbjct: 421 FPQWGDQCTDAMFLVDELGMGVRLRAPLRRGAVRDAVDAAVAGPDAGAMRSSAAAWSAAA 242
Query: 387 XXXXXPGGSSDAHVQAFVDEVSRRA 461
GGSSD HV+AFV+EV RA
Sbjct: 241 RAAVAAGGSSDRHVEAFVEEVKARA 167
Score = 166 bits (358), Expect = 2e-039
Identities = 69/108 (63%), Positives = 70/108 (64%)
Frame = +1 / -3
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 597 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 418
Query: 211 RSGATSARTPSSWWTSSGWVSASAGRCGGTPCGRRWTPQWRGPRPTRC 354
RSG TSA TP S TSSGW SASA RCG PC TP WRGP P RC
Sbjct: 417 RSGGTSAPTPCSSSTSSGWASASARRCGAAPCATPSTPPWRGPTPARC 274
Score = 158 bits (340), Expect(2) = 3e-039
Identities = 69/108 (63%), Positives = 76/108 (70%)
Frame = -2 / +2
Query: 353 HRVGLGPRHCGVHRLPHGVPPQRPAEADTHPELVHQELGVRALVAPLREGHHGHARRDGL 174
HR G+GPRH GV + HG PQR AEAD HPELV +E GV ALV PLRE HH HA D L
Sbjct: 275 HRAGVGPRHGGVDGVAHGAAPQRRAEADAHPELVDEEHGVGALVPPLRERHHRHAGGDRL 454
Query: 173 QGGVPPAVREEAGGGRVRQHAVLGAPRHHRAAPGHGVQEPVRQQRPGV 30
Q VP AVREEA G V +H +LGAP HH AA G GV+EP+RQQR V
Sbjct: 455 QRRVPAAVREEARHGGVDEHLLLGAPWHHHAAAGDGVEEPLRQQRAAV 598
Score = 116 bits (249), Expect(2) = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / +3
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 384 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 560
Score = 29.9 bits (59), Expect(2) = 9e-062
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWVVRP
Sbjct: 628 GRPFLWVVRP 599
Score = 27.6 bits (54), Expect(2) = 3e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +3
Query: 460 ARRDTSSTNAWTCASEDPP 404
AR TSSTNA T S++PP
Sbjct: 168 ARAFTSSTNASTWRSDEPP 224
Score = 21.7 bits (41), Expect(2) = 2e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 449 HLVHERLDVRV 417
HL+HERL V V
Sbjct: 179 HLLHERLHVAV 211
>gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08L08 3', mRNA sequence
Length = 634
Score = 232 bits (500), Expect = 5e-059
Identities = 92/145 (63%), Positives = 102/145 (70%)
Frame = +3 / -3
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 623 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 444
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLRGPLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXX 386
FPQWGDQCTDA FLVDELGMGVRLR PL GP+A
Sbjct: 443 FPQWGDQCTDAMFLVDELGMGVRLRAPLRRGAVRDAVDAAVAGPDAGAMRSSAAAWSAAA 264
Query: 387 XXXXXPGGSSDAHVQAFVDEVSRRA 461
GGSSD HV+AFV+EV RA
Sbjct: 263 RAAVAAGGSSDRHVEAFVEEVKARA 189
Score = 166 bits (358), Expect = 2e-039
Identities = 69/108 (63%), Positives = 70/108 (64%)
Frame = +1 / -1
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 619 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 440
Query: 211 RSGATSARTPSSWWTSSGWVSASAGRCGGTPCGRRWTPQWRGPRPTRC 354
RSG TSA TP S TSSGW SASA RCG PC TP WRGP P RC
Sbjct: 439 RSGGTSAPTPCSSSTSSGWASASARRCGAAPCATPSTPPWRGPTPARC 296
Score = 158 bits (340), Expect(2) = 3e-039
Identities = 69/108 (63%), Positives = 76/108 (70%)
Frame = -2 / +3
Query: 353 HRVGLGPRHCGVHRLPHGVPPQRPAEADTHPELVHQELGVRALVAPLREGHHGHARRDGL 174
HR G+GPRH GV + HG PQR AEAD HPELV +E GV ALV PLRE HH HA D L
Sbjct: 297 HRAGVGPRHGGVDGVAHGAAPQRRAEADAHPELVDEEHGVGALVPPLRERHHRHAGGDRL 476
Query: 173 QGGVPPAVREEAGGGRVRQHAVLGAPRHHRAAPGHGVQEPVRQQRPGV 30
Q VP AVREEA G V +H +LGAP HH AA G GV+EP+RQQR V
Sbjct: 477 QRRVPAAVREEARHGGVDEHLLLGAPWHHHAAAGDGVEEPLRQQRAAV 620
Score = 116 bits (249), Expect(2) = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / +1
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 406 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 582
Score = 27.6 bits (54), Expect(2) = 3e-039
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 460 ARRDTSSTNAWTCASEDPP 404
AR TSSTNA T S++PP
Sbjct: 190 ARAFTSSTNASTWRSDEPP 246
Score = 21.7 bits (41), Expect(2) = 2e-024
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 449 HLVHERLDVRV 417
HL+HERL V V
Sbjct: 201 HLLHERLHVAV 233
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 232 bits (500), Expect = 5e-059
Identities = 92/145 (63%), Positives = 102/145 (70%)
Frame = +3 / -2
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 4889169 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 4888990
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLRGPLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXX 386
FPQWGDQCTDA FLVDELGMGVRLR PL GP+A
Sbjct: 4888989 FPQWGDQCTDAMFLVDELGMGVRLRAPLRRGAVRDAVDAAVAGPDAGAMRSSAAAWSAAA 4888810
Query: 387 XXXXXPGGSSDAHVQAFVDEVSRRA 461
GGSSD HV+AFV+EV RA
Sbjct: 4888809 RAAVAAGGSSDRHVEAFVEEVKARA 4888735
Score = 166 bits (358), Expect = 2e-039
Identities = 69/108 (63%), Positives = 70/108 (64%)
Frame = +1 / -3
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 4889165 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 4888986
Query: 211 RSGATSARTPSSWWTSSGWVSASAGRCGGTPCGRRWTPQWRGPRPTRC 354
RSG TSA TP S TSSGW SASA RCG PC TP WRGP P RC
Sbjct: 4888985 RSGGTSAPTPCSSSTSSGWASASARRCGAAPCATPSTPPWRGPTPARC 4888842
Score = 158 bits (340), Expect = 6e-037
Identities = 69/108 (63%), Positives = 76/108 (70%)
Frame = -2 / +1
Query: 353 HRVGLGPRHCGVHRLPHGVPPQRPAEADTHPELVHQELGVRALVAPLREGHHGHARRDGL 174
HR G+GPRH GV + HG PQR AEAD HPELV +E GV ALV PLRE HH HA D L
Sbjct: 4888843 HRAGVGPRHGGVDGVAHGAAPQRRAEADAHPELVDEEHGVGALVPPLRERHHRHAGGDRL 4889022
Query: 173 QGGVPPAVREEAGGGRVRQHAVLGAPRHHRAAPGHGVQEPVRQQRPGV 30
Q VP AVREEA G V +H +LGAP HH AA G GV+EP+RQQR V
Sbjct: 4889023 QRRVPAAVREEARHGGVDEHLLLGAPWHHHAAAGDGVEEPLRQQRAAV 4889166
Score = 116 bits (249), Expect = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / +2
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 4888952 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 4889128
Score = 111 bits (236), Expect = 1e-022
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / -1
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 25442623 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 25442444
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 25442443 YPVAGDQFINCAYIVRAWGIGIRLR 25442369
>dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A01, full
insert sequence
Length = 1615
Score = 188 bits (406), Expect(3) = 4e-049
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +3 / +3
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 1101 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 1280
Query: 207 FPQWGDQCTDAKFLVDELGMGVR 275
FPQWGDQCTDA FLVDELGMGVR
Sbjct: 1281 FPQWGDQCTDAMFLVDELGMGVR 1349
Score = 123 bits (263), Expect = 3e-026
Identities = 53/83 (63%), Positives = 55/83 (66%)
Frame = +1 / +1
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 1105 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 1284
Query: 211 RSGATSARTPSSWWTSSGWVSAS 279
RSG TSA TP S TSSGW SA+
Sbjct: 1285 RSGGTSAPTPCSSSTSSGWASAT 1353
Score = 118 bits (253), Expect = 6e-025
Identities = 53/82 (64%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 275 ADTHPELVHQELGVRALVAPLREGHHGHARRDGLQGGVPPAVREEAGGGRVRQHAVLGAP 96
AD HPELV +E GV ALV PLRE HH HA D LQ VP AVREEA G V +H +LGAP
Sbjct: 1349 ADAHPELVDEEHGVGALVPPLRERHHRHAGGDRLQRRVPAAVREEARHGGVDEHLLLGAP 1170
Query: 95 RHHRAAPGHGVQEPVRQQRPGV 30
HH AA G GV+EP+RQQR V
Sbjct: 1169 WHHHAAAGDGVEEPLRQQRAAV 1104
Score = 116 bits (249), Expect = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / -1
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 1318 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 1142
Score = 29.9 bits (59), Expect(3) = 4e-049
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 1 GRPFLWVVRP 30
GRPFLWVVRP
Sbjct: 1074 GRPFLWVVRP 1103
Score = 24.9 bits (48), Expect(3) = 4e-049
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 408 GSSDAHVQAFVDEVSRRA 461
G HV+AFV+EV RA
Sbjct: 1335 GMGVRHVEAFVEEVKARA 1388
>ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1615
Score = 188 bits (406), Expect(3) = 4e-049
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +3 / +3
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
PD+R LLP+GFLD+VAGRG VVPWSPQ++VL HP+ ACFLTHCGWNSTLET+AAGVPVVA
Sbjct: 1101 PDSRALLPEGFLDAVAGRGMVVPWSPQEQVLVHPAVACFLTHCGWNSTLETVAAGVPVVA 1280
Query: 207 FPQWGDQCTDAKFLVDELGMGVR 275
FPQWGDQCTDA FLVDELGMGVR
Sbjct: 1281 FPQWGDQCTDAMFLVDELGMGVR 1349
Score = 123 bits (263), Expect = 3e-026
Identities = 53/83 (63%), Positives = 55/83 (66%)
Frame = +1 / +1
Query: 31 TPGRCCRTGSWTPWPGAARWCLGAPRTACWRTRPPPASSRTAGGTPPWRPSRRACPWWPS 210
T RCCR GS TP P AA WC GAPR+ C T P ASSRTA GT WR S AC WW S
Sbjct: 1105 TAARCCRRGSSTPSPAAAWWCHGAPRSKCSSTPPWRASSRTAAGTRRWRRSPPACRWWRS 1284
Query: 211 RSGATSARTPSSWWTSSGWVSAS 279
RSG TSA TP S TSSGW SA+
Sbjct: 1285 RSGGTSAPTPCSSSTSSGWASAT 1353
Score = 118 bits (253), Expect = 6e-025
Identities = 53/82 (64%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 275 ADTHPELVHQELGVRALVAPLREGHHGHARRDGLQGGVPPAVREEAGGGRVRQHAVLGAP 96
AD HPELV +E GV ALV PLRE HH HA D LQ VP AVREEA G V +H +LGAP
Sbjct: 1349 ADAHPELVDEEHGVGALVPPLRERHHRHAGGDRLQRRVPAAVREEARHGGVDEHLLLGAP 1170
Query: 95 RHHRAAPGHGVQEPVRQQRPGV 30
HH AA G GV+EP+RQQR V
Sbjct: 1169 WHHHAAAGDGVEEPLRQQRAAV 1104
Score = 116 bits (249), Expect = 2e-024
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3 / -1
Query: 244 NLASVHWSPHCGKATTGTPAAMVSRVEFHPQCVRKQAVDGCASTRSWGLQGTTAPRPAT 68
N+ASVHWSPHCG ATTGTPAA VS VEF PQCVRK A G ST SWGL GTT PRPAT
Sbjct: 1318 NMASVHWSPHCGNATTGTPAATVSSVEFQPQCVRKHATAGWTSTCSWGLHGTTMPRPAT 1142
Score = 29.9 bits (59), Expect(3) = 4e-049
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 1 GRPFLWVVRP 30
GRPFLWVVRP
Sbjct: 1074 GRPFLWVVRP 1103
Score = 24.9 bits (48), Expect(3) = 4e-049
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 408 GSSDAHVQAFVDEVSRRA 461
G HV+AFV+EV RA
Sbjct: 1335 GMGVRHVEAFVEEVKARA 1388
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0519D04
Length = 193068
Score = 123 bits (264), Expect(3) = 5e-030
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 12586 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 12765
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 12766 PAWSDQITNAKLLADVYGVGVRL 12834
Score = 106 bits (227), Expect(3) = 3e-028
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 17110 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 17289
Query: 258 LGMGVR 275
+GVR
Sbjct: 17290 YRVGVR 17307
Score = 35.0 bits (70), Expect(3) = 3e-028
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3 / +1
Query: 285 PLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVDEVS 452
PL GPEA+ GGSSD VQAFVD ++
Sbjct: 17320 PLTREALRLSVEEVTAGPEAEAMAARAAILGENARAAVGGGGSSDRGVQAFVDRIT 17487
Score = 25.4 bits (49), Expect(3) = 3e-028
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
GRPFLWV+R
Sbjct: 17026 GRPFLWVLR 17052
Score = 24.9 bits (48), Expect(3) = 5e-030
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3 / +2
Query: 333 GPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVD 443
GPEA+ GGSSD ++ F D
Sbjct: 12860 GPEAEAMRLRAREWSDKASAAVANGGSSDMGIRDFAD 12970
Score = 24.4 bits (47), Expect(3) = 5e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 12556 GHPFLWVVR 12582
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0478H03
Length = 167560
Score = 123 bits (264), Expect(3) = 5e-030
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 131993 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 132172
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 132173 PAWSDQITNAKLLADVYGVGVRL 132241
Score = 106 bits (227), Expect(3) = 3e-028
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +2
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 136517 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 136696
Query: 258 LGMGVR 275
+GVR
Sbjct: 136697 YRVGVR 136714
Score = 35.0 bits (70), Expect(3) = 3e-028
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3 / +2
Query: 285 PLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVDEVS 452
PL GPEA+ GGSSD VQAFVD ++
Sbjct: 136727 PLTREALRLSVEEVTAGPEAEAMAARAAILGENARAAVGGGGSSDRGVQAFVDRIT 136894
Score = 25.4 bits (49), Expect(3) = 3e-028
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
GRPFLWV+R
Sbjct: 136433 GRPFLWVLR 136459
Score = 24.9 bits (48), Expect(3) = 5e-030
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3 / +3
Query: 333 GPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVD 443
GPEA+ GGSSD ++ F D
Sbjct: 132267 GPEAEAMRLRAREWSDKASAAVANGGSSDMGIRDFAD 132377
Score = 24.4 bits (47), Expect(3) = 5e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 131963 GHPFLWVVR 131989
>gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002128, whole
genome shotgun sequence
Length = 69109
Score = 123 bits (264), Expect(3) = 5e-030
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / -2
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 40227 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 40048
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 40047 PAWSDQITNAKLLADVYGVGVRL 39979
Score = 90.0 bits (190), Expect(2) = 8e-021
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = +3 / -1
Query: 111 RVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDELGMGVR 275
RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD +GVR
Sbjct: 35665 RVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDVYRVGVR 35501
Score = 34.5 bits (69), Expect(2) = 8e-021
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3 / -1
Query: 285 PLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVDEVS 452
PL GPEA+ GGSSD VQAFVD ++
Sbjct: 35488 PLTREALRLSVEEVTAGPEAEAMAARAAILGENAQGAVGGGGSSDRGVQAFVDRIT 35321
Score = 24.9 bits (48), Expect(3) = 5e-030
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3 / -3
Query: 333 GPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVD 443
GPEA+ GGSSD ++ F D
Sbjct: 39953 GPEAEAMRLRAREWSDKASAAVANGGSSDMGIRDFAD 39843
Score = 24.4 bits (47), Expect(3) = 5e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 40257 GHPFLWVVR 40231
>dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C08, full
insert sequence
Length = 1583
Score = 123 bits (264), Expect(3) = 6e-030
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +3
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 972 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 1151
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 1152 PAWSDQITNAKLLADVYGVGVRL 1220
Score = 24.9 bits (48), Expect(3) = 6e-030
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = +3 / +1
Query: 333 GPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVD 443
GPEA+ GGSSD ++ F D
Sbjct: 1246 GPEAEAMRLRAREWSDKASAAVANGGSSDMGIRDFAD 1356
Score = 24.4 bits (47), Expect(3) = 6e-030
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 942 GHPFLWVVR 968
>ref|NT_107220.1| Oryza sativa (japonica cultivar-group)
Length = 436435
Score = 116 bits (247), Expect(3) = 4e-029
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / -3
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 298565 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 298386
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 298385 KVGVRLPAPVTGGELRACVDRVMSGPEA 298302
Score = 27.2 bits (53), Expect(3) = 4e-029
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEVSRRACGVQVAKV 485
GGSSD +Q FVD V R ++A++
Sbjct: 298241 GGSSDRSLQDFVDHVRRSKGPEELARL 298161
Score = 26.7 bits (52), Expect(3) = 4e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 1 GRPFLWVVR 27
GRPFLWVVR
Sbjct: 298652 GRPFLWVVR 298626
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
complete sequence
Length = 191765
Score = 116 bits (247), Expect(3) = 4e-029
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / -1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 141110 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 140931
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 140930 KVGVRLPAPVTGGELRACVDRVMSGPEA 140847
Score = 27.2 bits (53), Expect(3) = 4e-029
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 405 GGSSDAHVQAFVDEVSRRACGVQVAKV 485
GGSSD +Q FVD V R ++A++
Sbjct: 140786 GGSSDRSLQDFVDHVRRSKGPEELARL 140706
Score = 26.7 bits (52), Expect(3) = 4e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 1 GRPFLWVVR 27
GRPFLWVVR
Sbjct: 141197 GRPFLWVVR 141171
>gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012676, whole
genome shotgun sequence
Length = 33360
Score = 116 bits (247), Expect(3) = 5e-029
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / +1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 27838 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 28017
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 28018 KVGVRLPAPVTGGELRACVDRVMSGPEA 28101
Score = 27.2 bits (53), Expect(3) = 5e-029
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3 / +1
Query: 405 GGSSDAHVQAFVDEVSRRACGVQVAKV 485
GGSSD +Q FVD V R ++A++
Sbjct: 28162 GGSSDRSLQDFVDHVRRSKGPEELARL 28242
Score = 26.7 bits (52), Expect(3) = 5e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
GRPFLWVVR
Sbjct: 27751 GRPFLWVVR 27777
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full
insert sequence
Length = 1783
Score = 116 bits (247), Expect(3) = 5e-029
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / +3
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 1128 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 1307
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 1308 KVGVRLPAPVTGGELRACVDRVMSGPEA 1391
Score = 27.2 bits (53), Expect(3) = 5e-029
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3 / +3
Query: 405 GGSSDAHVQAFVDEVSRRACGVQVAKV 485
GGSSD +Q FVD V R ++A++
Sbjct: 1452 GGSSDRSLQDFVDHVRRSKGPEELARL 1532
Score = 26.7 bits (52), Expect(3) = 5e-029
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 1 GRPFLWVVR 27
GRPFLWVVR
Sbjct: 1041 GRPFLWVVR 1067
>dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C10, full
insert sequence
Length = 1849
Score = 106 bits (227), Expect(3) = 3e-028
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +3
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 1101 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 1280
Query: 258 LGMGVR 275
+GVR
Sbjct: 1281 YRVGVR 1298
Score = 35.0 bits (70), Expect(3) = 3e-028
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3 / +3
Query: 285 PLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVDEVS 452
PL GPEA+ GGSSD VQAFVD ++
Sbjct: 1311 PLTREALRLSVEEVTAGPEAEAMAARAAILGENARAAVGGGGSSDRGVQAFVDRIT 1478
Score = 25.4 bits (49), Expect(3) = 3e-028
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 1 GRPFLWVVR 27
GRPFLWV+R
Sbjct: 1017 GRPFLWVLR 1043
>ref|NM_192094.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1377
Score = 106 bits (227), Expect(3) = 3e-028
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 979 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 1158
Query: 258 LGMGVR 275
+GVR
Sbjct: 1159 YRVGVR 1176
Score = 35.0 bits (70), Expect(3) = 3e-028
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +3 / +1
Query: 285 PLXXXXXXXXXXXXXXGPEADXXXXXXXXXXXXXXXXXXPGGSSDAHVQAFVDEVS 452
PL GPEA+ GGSSD VQAFVD ++
Sbjct: 1189 PLTREALRLSVEEVTAGPEAEAMAARAAILGENARAAVGGGGSSDRGVQAFVDRIT 1356
Score = 25.4 bits (49), Expect(3) = 3e-028
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
GRPFLWV+R
Sbjct: 895 GRPFLWVLR 921
>ref|NM_192093.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1341
Score = 123 bits (264), Expect(2) = 7e-028
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 997 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 1176
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 1177 PAWSDQITNAKLLADVYGVGVRL 1245
Score = 24.4 bits (47), Expect(2) = 7e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 967 GHPFLWVVR 993
>ref|NT_107075.1| Oryza sativa (japonica cultivar-group)
Length = 389359
Score = 120 bits (256), Expect(2) = 3e-027
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 329896 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 330075
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 330076 QTTNARYIEDVWRVGVRVRG 330135
Score = 112 bits (239), Expect(2) = 9e-025
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 337735 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 337914
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 337915 VWRVGVRVR 337941
Score = 107 bits (228), Expect(2) = 7e-023
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3 / +1
Query: 66 SVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKF 245
+ A G VV W PQ VLAHP+ CFLTHCGWNST E + AGVP+VA PQW DQ +A++
Sbjct: 317530 AAAANGMVVSWCPQLEVLAHPAVGCFLTHCGWNSTAEALVAGVPMVALPQWTDQPMNAEY 317709
Query: 246 LVDELGMGVRLR 281
+ G GVR+R
Sbjct: 317710 VEAVWGAGVRVR 317745
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 1 GRPFLWVVRPT 33
G PFLWVVR T
Sbjct: 329851 GSPFLWVVRAT 329883
Score = 25.4 bits (49), Expect(2) = 9e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G+PFLWVVR
Sbjct: 337654 GKPFLWVVR 337680
Score = 24.0 bits (46), Expect(2) = 7e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 317461 GAPFLWVVR 317487
>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0217C03
Length = 58309
Score = 120 bits (256), Expect(2) = 3e-027
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 27500 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 27679
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 27680 QTTNARYIEDVWRVGVRVRG 27739
Score = 112 bits (239), Expect(2) = 9e-025
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 35339 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 35518
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 35519 VWRVGVRVR 35545
Score = 107 bits (228), Expect(2) = 7e-023
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3 / +2
Query: 66 SVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKF 245
+ A G VV W PQ VLAHP+ CFLTHCGWNST E + AGVP+VA PQW DQ +A++
Sbjct: 15134 AAAANGMVVSWCPQLEVLAHPAVGCFLTHCGWNSTAEALVAGVPMVALPQWTDQPMNAEY 15313
Query: 246 LVDELGMGVRLR 281
+ G GVR+R
Sbjct: 15314 VEAVWGAGVRVR 15349
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 1 GRPFLWVVRPT 33
G PFLWVVR T
Sbjct: 27455 GSPFLWVVRAT 27487
Score = 25.4 bits (49), Expect(2) = 9e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
G+PFLWVVR
Sbjct: 35258 GKPFLWVVR 35284
Score = 24.0 bits (46), Expect(2) = 7e-023
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
G PFLWVVR
Sbjct: 15065 GAPFLWVVR 15091
>gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020393, whole
genome shotgun sequence
Length = 17450
Score = 120 bits (256), Expect(2) = 3e-027
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 4105 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 4284
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 4285 QTTNARYIEDVWRVGVRVRG 4344
Score = 112 bits (239), Expect(2) = 9e-025
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 11945 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 12124
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 12125 VWRVGVRVR 12151
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 1 GRPFLWVVRPT 33
G PFLWVVR T
Sbjct: 4060 GSPFLWVVRAT 4092
Score = 25.4 bits (49), Expect(2) = 9e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
G+PFLWVVR
Sbjct: 11864 GKPFLWVVR 11890
>gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10G04 3', mRNA sequence
Length = 772
Score = 120 bits (256), Expect(2) = 3e-027
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / -1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 598 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 419
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 418 QTTNARYIEDVWRVGVRVRG 359
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPT 33
G PFLWVVR T
Sbjct: 643 GSPFLWVVRAT 611
>gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11G13 3', mRNA sequence
Length = 772
Score = 120 bits (256), Expect(2) = 3e-027
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / -2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 597 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 418
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 417 QTTNARYIEDVWRVGVRVRG 358
Score = 25.8 bits (50), Expect(2) = 3e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 1 GRPFLWVVRPT 33
G PFLWVVR T
Sbjct: 642 GSPFLWVVRAT 610
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 123 bits (264), Expect = 2e-026
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 28378156 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 28378335
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 28378336 PAWSDQITNAKLLADVYGVGVRL 28378404
Score = 106 bits (227), Expect = 2e-021
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 28382680 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 28382859
Query: 258 LGMGVR 275
+GVR
Sbjct: 28382860 YRVGVR 28382877
Score = 105 bits (223), Expect = 9e-021
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +3 / -1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G VV W Q RVL HP+ CF+THCGWNSTLE +A+GVP V PQW DQ T+A + + L
Sbjct: 4150374 GVVVEWCDQVRVLGHPAVGCFVTHCGWNSTLEAVASGVPAVCVPQWTDQGTNAWLVAERL 4150195
Query: 261 GMGVR 275
G GVR
Sbjct: 4150194 GAGVR 4150180
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 123 bits (264), Expect = 2e-026
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 2825539 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 2825718
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 2825719 PAWSDQITNAKLLADVYGVGVRL 2825787
Score = 106 bits (227), Expect = 2e-021
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 2830063 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 2830242
Query: 258 LGMGVR 275
+GVR
Sbjct: 2830243 YRVGVR 2830260
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 123 bits (264), Expect = 2e-026
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +2
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 2758604 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 2758783
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 2758784 PAWSDQITNAKLLADVYGVGVRL 2758852
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 123 bits (264), Expect = 2e-026
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 27960325 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 27960504
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 27960505 PAWSDQITNAKLLADVYGVGVRL 27960573
Score = 105 bits (223), Expect = 9e-021
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +3 / -1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G VV W Q RVL HP+ CF+THCGWNSTLE +A+GVP V PQW DQ T+A + + L
Sbjct: 4190097 GVVVEWCDQVRVLGHPAVGCFVTHCGWNSTLEAVASGVPAVCVPQWTDQGTNAWLVAERL 4189918
Query: 261 GMGVR 275
G GVR
Sbjct: 4189917 GAGVR 4189903
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 123 bits (264), Expect = 2e-026
Identities = 49/83 (59%), Positives = 57/83 (68%)
Frame = +3 / +1
Query: 30 DTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAF 209
D+R L P G +G VV W Q RVLAHP+ CF+THCGWNST E +AAGVPVVA+
Sbjct: 28297486 DSRELHPHGESGGGGDKGKVVAWCEQRRVLAHPAVGCFVTHCGWNSTTEALAAGVPVVAY 28297665
Query: 210 PQWGDQCTDAKFLVDELGMGVRL 278
P W DQ T+AK L D G+GVRL
Sbjct: 28297666 PAWSDQITNAKLLADVYGVGVRL 28297734
Score = 106 bits (227), Expect = 2e-021
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / +1
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 28302010 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 28302189
Query: 258 LGMGVR 275
+GVR
Sbjct: 28302190 YRVGVR 28302207
Score = 105 bits (223), Expect = 9e-021
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = +3 / -2
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G VV W Q RVL HP+ CF+THCGWNSTLE +A+GVP V PQW DQ T+A + + L
Sbjct: 4152572 GVVVEWCDQVRVLGHPAVGCFVTHCGWNSTLEAVASGVPAVCVPQWTDQGTNAWLVAERL 4152393
Query: 261 GMGVR 275
G GVR
Sbjct: 4152392 GAGVR 4152378
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 120 bits (256), Expect = 2e-025
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 9425227 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 9425406
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 9425407 QTTNARYIEDVWRVGVRVRG 9425466
Score = 112 bits (239), Expect = 5e-023
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 9433067 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 9433246
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 9433247 VWRVGVRVR 9433273
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 120 bits (256), Expect = 2e-025
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 18899038 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 18899217
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 18899218 QTTNARYIEDVWRVGVRVRG 18899277
Score = 112 bits (239), Expect = 5e-023
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 18906878 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 18907057
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 18907058 VWRVGVRVR 18907084
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 120 bits (256), Expect = 2e-025
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LP GF G +VPW PQ VLAH + CF+THCGWNST+E ++AGVP+VA PQW D
Sbjct: 19920414 LPAGFAARAKNTGLIVPWCPQLEVLAHAAVGCFVTHCGWNSTVEALSAGVPMVAVPQWSD 19920593
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q T+A+++ D +GVR+RG
Sbjct: 19920594 QTTNARYIEDVWRVGVRVRG 19920653
Score = 112 bits (239), Expect = 5e-023
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +3
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 19928253 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 19928432
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 19928433 VWRVGVRVR 19928459
Score = 107 bits (228), Expect = 2e-021
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3 / +3
Query: 66 SVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKF 245
+ A G VV W PQ VLAHP+ CFLTHCGWNST E + AGVP+VA PQW DQ +A++
Sbjct: 19908048 AAAANGMVVSWCPQLEVLAHPAVGCFLTHCGWNSTAEALVAGVPMVALPQWTDQPMNAEY 19908227
Query: 246 LVDELGMGVRLR 281
+ G GVR+R
Sbjct: 19908228 VEAVWGAGVRVR 19908263
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0498F03
Length = 54025
Score = 112 bits (239), Expect(2) = 9e-025
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 2401 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 2580
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 2581 VWRVGVRVR 2607
Score = 25.4 bits (49), Expect(2) = 9e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVR 27
G+PFLWVVR
Sbjct: 2320 GKPFLWVVR 2346
>dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082A13, full
insert sequence
Length = 1654
Score = 112 bits (239), Expect(2) = 1e-024
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 75 GRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVD 254
GRG +V W PQ VLAHP+ CF+THCGWNST E ++AGVP+VA PQW DQ +AK++ D
Sbjct: 1052 GRGLIVTWCPQLEVLAHPAVGCFVTHCGWNSTTEGLSAGVPMVAVPQWSDQTMNAKYIED 1231
Query: 255 ELGMGVRLR 281
+GVR+R
Sbjct: 1232 VWRVGVRVR 1258
Score = 25.4 bits (49), Expect(2) = 1e-024
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1 GRPFLWVVR 27
G+PFLWVVR
Sbjct: 971 GKPFLWVVR 997
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1643_A10
Length = 130037
Score = 111 bits (236), Expect(2) = 1e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / -1
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 98285 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 98106
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 98105 YPVAGDQFINCAYIVRAWGIGIRLR 98031
Score = 26.3 bits (51), Expect(2) = 1e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 98318 GRPFLWVLKDDP 98283
>gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004995, whole
genome shotgun sequence
Length = 33834
Score = 111 bits (236), Expect(2) = 1e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / +2
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 30914 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 31093
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 31094 YPVAGDQFINCAYIVRAWGIGIRLR 31168
Score = 26.3 bits (51), Expect(2) = 1e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 30881 GRPFLWVLKDDP 30916
>ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1560
Score = 111 bits (236), Expect(2) = 1e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / +1
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 1123 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 1302
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 1303 YPVAGDQFINCAYIVRAWGIGIRLR 1377
Score = 26.3 bits (51), Expect(2) = 1e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 1090 GRPFLWVLKDDP 1125
>gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0111A07f, DNA
sequence
Length = 677
Score = 111 bits (236), Expect(2) = 1e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / -1
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 398 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 219
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 218 YPVAGDQFINCAYIVRAWGIGIRLR 144
Score = 26.3 bits (51), Expect(2) = 1e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 431 GRPFLWVLKDDP 396
>gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0028P11f, DNA sequence
Length = 471
Score = 111 bits (236), Expect(2) = 1e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / -1
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 435 PSWRAGLPAGYTDQYSGRGKIVAWAPQEDVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 256
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 255 YPVAGDQFINCAYIVRAWGIGIRLR 181
Score = 26.3 bits (51), Expect(2) = 1e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 468 GRPFLWVLKDDP 433
>dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E02, full
insert sequence
Length = 2591
Score = 104 bits (222), Expect(2) = 2e-024
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3 / +1
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ+ VL+HPS FLTHCGWNSTLE+I AGVP++ +P
Sbjct: 1075 KAMLPEEFVGETKERGVLASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMICWPF 1254
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ +++ D+ G+G+ +
Sbjct: 1255 FAEQPTNCRYVCDKWGVGMEI 1317
Score = 32.2 bits (64), Expect(2) = 2e-024
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV+RP P
Sbjct: 1027 GRPFLWVIRPDP 1062
>gb|AQ860883.1|AQ860883 nbeb0015L24f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0015L24f, DNA sequence
Length = 486
Score = 111 bits (237), Expect(2) = 2e-024
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +3 / -2
Query: 27 PDTRPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVA 206
P R LP G+ D +GRG +V W+PQ+ VLAH + C+LTHCGWNSTLE I GV ++
Sbjct: 431 PSCRAGLPAGYTDQYSGRGKIVAWAPQEYVLAHGAVGCYLTHCGWNSTLEAIRHGVRMLC 252
Query: 207 FPQWGDQCTDAKFLVDELGMGVRLR 281
+P GDQ + ++V G+G+RLR
Sbjct: 251 YPVAGDQFINCAYIVRAWGIGIRLR 177
Score = 25.4 bits (49), Expect(2) = 2e-024
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 1 GRPFLWVVRPTP 36
GRPFLWV++ P
Sbjct: 465 GRPFLWVLQGRP 430
>gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0066N22r, DNA sequence
Length = 856
Score = 106 bits (227), Expect(3) = 2e-024
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +3 / -2
Query: 78 RGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDE 257
RG VVPW Q RVLAH + CF+THCGWNST E +AAGVP+VA P+W DQ + +F+VD
Sbjct: 531 RGKVVPWCEQRRVLAHAAVGCFVTHCGWNSTAEALAAGVPMVASPRWSDQRINTRFVVDV 352
Query: 258 LGMGVR 275
+GVR
Sbjct: 351 YRVGVR 334
Score = 28.6 bits (56), Expect(3) = 2e-024
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 405 GGSSDAHVQAFVDEVS 452
GGSSD VQAFVD ++
Sbjct: 200 GGSSDRGVQAFVDRIT 153
Score = 22.6 bits (43), Expect(3) = 2e-024
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / -3
Query: 4 RPFLWVVR 27
RPFLWV+R
Sbjct: 611 RPFLWVLR 588
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0523A04
Length = 149049
Score = 109 bits (233), Expect(2) = 3e-024
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +2
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGF + GRGAVV W+PQ+ VLAHP+TA F THCGWNSTLE++ AGVP++ P +GD
Sbjct: 121010 LPDGFDAATRGRGAVVSWAPQEEVLAHPATAAFWTHCGWNSTLESVCAGVPMLLRPCFGD 121189
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q +A++ G+ L G
Sbjct: 121190 QPGNARYAERVWRAGLALDG 121249
Score = 26.3 bits (51), Expect(2) = 3e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 1 GRPFLWVVRP 30
G PFLWV+RP
Sbjct: 120947 GHPFLWVLRP 120976
>gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015535, whole
genome shotgun sequence
Length = 39781
Score = 109 bits (233), Expect(2) = 3e-024
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +3
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGF + GRGAVV W+PQ+ VLAHP+TA F THCGWNSTLE++ AGVP++ P +GD
Sbjct: 11064 LPDGFDAATRGRGAVVSWAPQEEVLAHPATAAFWTHCGWNSTLESVCAGVPMLLRPCFGD 11243
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q +A++ G+ L G
Sbjct: 11244 QPGNARYAERVWRAGLALDG 11303
Score = 26.3 bits (51), Expect(2) = 3e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 1 GRPFLWVVRP 30
G PFLWV+RP
Sbjct: 11001 GHPFLWVLRP 11030
>ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1440
Score = 109 bits (233), Expect(2) = 3e-024
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / +1
Query: 45 LPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGD 224
LPDGF + GRGAVV W+PQ+ VLAHP+TA F THCGWNSTLE++ AGVP++ P +GD
Sbjct: 1015 LPDGFDAATRGRGAVVSWAPQEEVLAHPATAAFWTHCGWNSTLESVCAGVPMLLRPCFGD 1194
Query: 225 QCTDAKFLVDELGMGVRLRG 284
Q +A++ G+ L G
Sbjct: 1195 QPGNARYAERVWRAGLALDG 1254
Score = 26.3 bits (51), Expect(2) = 3e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 1 GRPFLWVVRP 30
G PFLWV+RP
Sbjct: 952 GHPFLWVLRP 981
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 116 bits (247), Expect = 4e-024
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / -3
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 9693373 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 9693194
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 9693193 KVGVRLPAPVTGGELRACVDRVMSGPEA 9693110
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 116 bits (247), Expect = 4e-024
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / -1
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 26993686 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 26993507
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 26993506 KVGVRLPAPVTGGELRACVDRVMSGPEA 26993423
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 116 bits (247), Expect = 4e-024
Identities = 44/88 (50%), Positives = 55/88 (62%)
Frame = +3 / -3
Query: 81 GAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQWGDQCTDAKFLVDEL 260
G + W PQ RVLAH + CF+THCGWNS +E +AAGVPVV +P W DQ +AKFLV++
Sbjct: 27266142 GKITAWCPQGRVLAHGAVGCFVTHCGWNSIMEALAAGVPVVGYPWWSDQFANAKFLVEDY 27265963
Query: 261 GMGVRLRGPLXXXXXXXXXXXXXXGPEA 344
+GVRL P+ GPEA
Sbjct: 27265962 KVGVRLPAPVTGGELRACVDRVMSGPEA 27265879
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0627E03
Length = 159861
Score = 104 bits (222), Expect(2) = 1e-023
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ+ VL+HPS FLTHCGWNSTLE+I AGVP++ +P
Sbjct: 106817 KAMLPEEFVGETKERGVLASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMICWPF 106638
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ +++ D+ G+G+ +
Sbjct: 106637 FAEQPTNCRYVCDKWGVGMEI 106575
Score = 95.0 bits (201), Expect(2) = 8e-021
Identities = 33/81 (40%), Positives = 55/81 (67%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ++VL HP+T FLTH GWNSTLE+I+AGVP++ +P
Sbjct: 102194 KAMLPEEFVSETKERGIFLSWCPQEQVLEHPATGLFLTHSGWNSTLESISAGVPMICWPF 102015
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ ++ + +G+ +
Sbjct: 102014 FAEQMTNCRYACTKWDIGLEI 101952
Score = 29.5 bits (58), Expect(2) = 8e-021
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWV+RP
Sbjct: 102242 GRPFLWVIRP 102213
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWV+RP
Sbjct: 106865 GRPFLWVIRP 106836
>gb|AACV01005441.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005441, whole
genome shotgun sequence
Length = 51538
Score = 104 bits (222), Expect(2) = 1e-023
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ+ VL+HPS FLTHCGWNSTLE+I AGVP++ +P
Sbjct: 45213 KAMLPEEFVGETKERGVLASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMICWPF 45034
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ +++ D+ G+G+ +
Sbjct: 45033 FAEQPTNCRYVCDKWGVGMEI 44971
Score = 95.0 bits (201), Expect(2) = 8e-021
Identities = 33/81 (40%), Positives = 55/81 (67%)
Frame = +3 / -2
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ++VL HP+T FLTH GWNSTLE+I+AGVP++ +P
Sbjct: 40590 KAMLPEEFVSETKERGIFLSWCPQEQVLEHPATGLFLTHSGWNSTLESISAGVPMICWPF 40411
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ ++ + +G+ +
Sbjct: 40410 FAEQMTNCRYACTKWDIGLEI 40348
Score = 29.5 bits (58), Expect(2) = 8e-021
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWV+RP
Sbjct: 40638 GRPFLWVIRP 40609
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1 GRPFLWVVRP 30
GRPFLWV+RP
Sbjct: 45261 GRPFLWVIRP 45232
>ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.27 mRNA
Length = 2591
Score = 104 bits (222), Expect(2) = 1e-023
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +3 / +1
Query: 36 RPLLPDGFLDSVAGRGAVVPWSPQDRVLAHPSTACFLTHCGWNSTLETIAAGVPVVAFPQ 215
+ +LP+ F+ RG + W PQ+ VL+HPS FLTHCGWNSTLE+I AGVP++ +P
Sbjct: 1075 KAMLPEEFVGETKERGVLASWCPQELVLSHPSVGLFLTHCGWNSTLESICAGVPMICWPF 1254
Query: 216 WGDQCTDAKFLVDELGMGVRL 278
+ +Q T+ +++ D+ G+G+ +
Sbjct: 1255 FAEQPTNCRYVCDKWGVGMEI 1317
Score = 29.5 bits (58), Expect(2) = 1e-023
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 1 GRPFLWVVRP 30
GRPFLWV+RP
Sbjct: 1027 GRPFLWVIRP 1056
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 5,049,922,957
Number of Sequences: 438736
Number of extensions: 93269546
Number of successful extensions: 1617193
Number of sequences better than 1.0e-020: 185
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 188778279248
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)