TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCM12g02.yg.2.1
(480 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORK... 305 3e-082
gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKI... 305 3e-082
gb|BF641357.1|BF641357 NF061B11IN1F1092 Insect herbivory Me... 244 5e-064
gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKIN... 224 9e-058
gb|AC157648.18| Medicago truncatula clone mth2-68d9, comple... 224 9e-058
gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone m... 219 3e-056
gb|AC122723.6| Medicago truncatula clone mth2-5i15, complet... 219 3e-056
gb|AC158209.13| Medicago truncatula clone mth2-154h5, compl... 213 2e-054
gb|AC137603.16| Medicago truncatula clone mth2-14b10, compl... 212 2e-054
gb|BG449853.1|BG449853 NF053H03IN1F1029 Insect herbivory Me... 138 7e-032
gb|BF004482.1|BF004482 EST432980 KV1 Medicago truncatula cD... 136 3e-031
gb|AC170583.6| Medicago truncatula clone mth2-19b5, complet... 69 4e-028
gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula c... 79 2e-021
>gb|AC150782.12| Medicago truncatula clone mth2-116a21, WORKING DRAFT SEQUENCE, 3
unordered pieces
Length = 118726
Score = 305 bits (660), Expect = 3e-082
Identities = 118/155 (76%), Positives = 135/155 (87%)
Frame = -3 / +3
Query: 466 GTVXNQQFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYY 287
G + NQQFIIQLG FTALPMI+ENSLE GFL AIWDF TMQ+ SSVFYTFSMGT+SH++
Sbjct: 21126 GAILNQQFIIQLGLFTALPMIVENSLEHGFLQAIWDFLTMQLQLSSVFYTFSMGTRSHFF 21305
Query: 286 GRTILHGGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNT 107
GRTILHGGAKYRATGRGFVV+HKSFAE YRL++R HF+KAIELG+IL +YA HS +A +T
Sbjct: 21306 GRTILHGGAKYRATGRGFVVEHKSFAEIYRLFSRSHFVKAIELGLILVIYATHSPVATDT 21485
Query: 106 LVYIXXXISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
VYI I+SWFLV SW++APF FNPSGFDWLKTV
Sbjct: 21486 FVYIALTITSWFLVASWVVAPFVFNPSGFDWLKTV 21590
Score = 219 bits (472), Expect = 3e-056
Identities = 102/155 (65%), Positives = 111/155 (71%)
Frame = +3 / -1
Query: 3 TVFNQSKPDGLKANGAIIHDTTRNQLDIXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TVFNQSKP+GL NGA HD T+NQL + +*T+V +A LC A +I P+SIAF KW
Sbjct: 21589 TVFNQSKPEGLNTNGATTHDATKNQLVMVRAI*TNVSVATGLCVA*ITSISPNSIAFTKW 21410
Query: 183 PLAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLLVPMENV*NTDEKFICIVKKS 362
SL* SAKLLC TTKPRPVARYFAPP RIVRP L VPME V* TDE CIVKKS
Sbjct: 21409 LREKSL*ISAKLLCSTTKPRPVARYFAPPCRIVRPKK*LRVPMEKV*KTDES*SCIVKKS 21230
Query: 363 QIAGRKPCSREFSIIIGNAVKKPSCMMNC*LXTVP 467
QIA R PCSREFS IIG AVK PS M+NC* P
Sbjct: 21229 QIAWRNPCSREFSTIIGRAVKSPSWMINC*FKMAP 21125
Score = 140 bits (301), Expect = 1e-032
Identities = 64/153 (41%), Positives = 98/153 (64%)
Frame = +2 / -3
Query: 8 FQPIKTRRIKSKWSHNP*YHQKPARYXXXYVNKCILGNNTVCSIHSQYYSKLYCLYEVAP 187
F PI+ R I+ K H+P* + +P Y+NKC+ TVC I+ +Y + +++A
Sbjct: 21584 F*PIEARGIEHKRCHHP*CN*EPTSNGQGYINKCVRCYRTVCCINYKY*PQFNSFHKMAT 21405
Query: 188 SIQPVIFSKTLVLHNKTTASSTVFCTTMKDCPAIVMALSSHGKCVEHR*KIHLHCEEIPD 367
+ + F KTLVL+NKTTA ++FC+T+++ PA M S+HG+ VE+ *K+ LH E+PD
Sbjct: 21404 GKESIDFGKTLVLYNKTTAGGSIFCSTVQNSPAKKMTASAHGEGVENG*KLKLHR*EVPD 21225
Query: 368 SR*ETLFKRVLYNHWQCSEEAKLYDELLIXNST 466
S E + K +LYNH + E++KL D+LLI + T
Sbjct: 21224 SLEEPVLKGILYNHRKGGEKSKLDDKLLI*DGT 21126
Score = 103 bits (220), Expect(2) = 5e-024
Identities = 39/81 (48%), Positives = 49/81 (60%)
Frame = -2 / +2
Query: 452 SAVHHTAWLLHCIANDYRELS*TRFPTCYLGFLHNANEFFICVLHIFHGN*EPLLWPDNP 273
SAV+H W H ++D RE * R P YLG L++A FI LH+ HG+ + WPD
Sbjct: 21140 SAVYHPTWTFHRPSDDCREFP*ARVPPSYLGLLNDATSAFIRFLHLLHGHSQSFFWPDYS 21319
Query: 272 SWWCKIPCYWPWFCCAAQEFC 210
+ W KI + PWFCC AQEFC
Sbjct: 21320 ARWSKISSHRPWFCCRAQEFC 21382
Score = 27.6 bits (54), Expect(2) = 5e-024
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2 / +2
Query: 101 LHXXXYI*LVSGGIMDYGSICF*SVWF*LVEN 6
L+ + *LV IM G++C S+W LV+N
Sbjct: 21491 LYSPDHY*LVLSCIMGGGTVCVQSLWLRLVKN 21586
>gb|AC158736.12| Medicago truncatula clone mth2-165n2, WORKING DRAFT SEQUENCE
Length = 118519
Score = 305 bits (660), Expect = 3e-082
Identities = 118/155 (76%), Positives = 135/155 (87%)
Frame = -3 / -1
Query: 466 GTVXNQQFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYY 287
G + NQQFIIQLG FTALPMI+ENSLE GFL AIWDF TMQ+ SSVFYTFSMGT+SH++
Sbjct: 11671 GAILNQQFIIQLGLFTALPMIVENSLEHGFLQAIWDFLTMQLQLSSVFYTFSMGTRSHFF 11492
Query: 286 GRTILHGGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNT 107
GRTILHGGAKYRATGRGFVV+HKSFAE YRL++R HF+KAIELG+IL +YA HS +A +T
Sbjct: 11491 GRTILHGGAKYRATGRGFVVEHKSFAEIYRLFSRSHFVKAIELGLILVIYATHSPVATDT 11312
Query: 106 LVYIXXXISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
VYI I+SWFLV SW++APF FNPSGFDWLKTV
Sbjct: 11311 FVYIALTITSWFLVASWVVAPFVFNPSGFDWLKTV 11207
Score = 219 bits (472), Expect = 3e-056
Identities = 102/155 (65%), Positives = 111/155 (71%)
Frame = +3 / +3
Query: 3 TVFNQSKPDGLKANGAIIHDTTRNQLDIXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
TVFNQSKP+GL NGA HD T+NQL + +*T+V +A LC A +I P+SIAF KW
Sbjct: 11208 TVFNQSKPEGLNTNGATTHDATKNQLVMVRAI*TNVSVATGLCVA*ITSISPNSIAFTKW 11387
Query: 183 PLAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLLVPMENV*NTDEKFICIVKKS 362
SL* SAKLLC TTKPRPVARYFAPP RIVRP L VPME V* TDE CIVKKS
Sbjct: 11388 LREKSL*ISAKLLCSTTKPRPVARYFAPPCRIVRPKK*LRVPMEKV*KTDES*SCIVKKS 11567
Query: 363 QIAGRKPCSREFSIIIGNAVKKPSCMMNC*LXTVP 467
QIA R PCSREFS IIG AVK PS M+NC* P
Sbjct: 11568 QIAWRNPCSREFSTIIGRAVKSPSWMINC*FKMAP 11672
Score = 140 bits (301), Expect = 1e-032
Identities = 64/153 (41%), Positives = 98/153 (64%)
Frame = +2 / +2
Query: 8 FQPIKTRRIKSKWSHNP*YHQKPARYXXXYVNKCILGNNTVCSIHSQYYSKLYCLYEVAP 187
F PI+ R I+ K H+P* + +P Y+NKC+ TVC I+ +Y + +++A
Sbjct: 11213 F*PIEARGIEHKRCHHP*CN*EPTSNGQGYINKCVRCYRTVCCINYKY*PQFNSFHKMAT 11392
Query: 188 SIQPVIFSKTLVLHNKTTASSTVFCTTMKDCPAIVMALSSHGKCVEHR*KIHLHCEEIPD 367
+ + F KTLVL+NKTTA ++FC+T+++ PA M S+HG+ VE+ *K+ LH E+PD
Sbjct: 11393 GKESIDFGKTLVLYNKTTAGGSIFCSTVQNSPAKKMTASAHGEGVENG*KLKLHR*EVPD 11572
Query: 368 SR*ETLFKRVLYNHWQCSEEAKLYDELLIXNST 466
S E + K +LYNH + E++KL D+LLI + T
Sbjct: 11573 SLEEPVLKGILYNHRKGGEKSKLDDKLLI*DGT 11671
Score = 103 bits (220), Expect(2) = 5e-024
Identities = 39/81 (48%), Positives = 49/81 (60%)
Frame = -2 / -3
Query: 452 SAVHHTAWLLHCIANDYRELS*TRFPTCYLGFLHNANEFFICVLHIFHGN*EPLLWPDNP 273
SAV+H W H ++D RE * R P YLG L++A FI LH+ HG+ + WPD
Sbjct: 11657 SAVYHPTWTFHRPSDDCREFP*ARVPPSYLGLLNDATSAFIRFLHLLHGHSQSFFWPDYS 11478
Query: 272 SWWCKIPCYWPWFCCAAQEFC 210
+ W KI + PWFCC AQEFC
Sbjct: 11477 ARWSKISSHRPWFCCRAQEFC 11415
Score = 27.6 bits (54), Expect(2) = 5e-024
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2 / -3
Query: 101 LHXXXYI*LVSGGIMDYGSICF*SVWF*LVEN 6
L+ + *LV IM G++C S+W LV+N
Sbjct: 11306 LYSPDHY*LVLSCIMGGGTVCVQSLWLRLVKN 11211
>gb|BF641357.1|BF641357 NF061B11IN1F1092 Insect herbivory Medicago truncatula cDNA clone
NF061B11IN 5', mRNA sequence
Length = 660
Score = 244 bits (528), Expect = 5e-064
Identities = 94/129 (72%), Positives = 112/129 (86%)
Frame = -3 / +1
Query: 466 GTVXNQQFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYY 287
G + NQQFIIQLG FTALPM++EN+LE GFLPA+WDF TMQ+ S+F+TFS+GT++H++
Sbjct: 274 GAIVNQQFIIQLGIFTALPMVVENTLEHGFLPAVWDFLTMQLQLGSLFFTFSLGTRTHFF 453
Query: 286 GRTILHGGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNT 107
GRTILHGGAKYRATGRGFVV+HKSFAENYRLYAR HF+KAIELGIIL VYA+HS + K T
Sbjct: 454 GRTILHGGAKYRATGRGFVVEHKSFAENYRLYARSHFVKAIELGIILIVYASHSPLPKAT 633
Query: 106 LVYIXXXIS 80
VYI +S
Sbjct: 634 FVYIAMTLS 660
Score = 168 bits (362), Expect = 4e-041
Identities = 79/124 (63%), Positives = 85/124 (68%)
Frame = +3 / -2
Query: 96 M*TSVFLAITLCAAYTVNIIPSSIAFMKWPLAYSL*FSAKLLCCTTKPRPVARYFAPP*R 275
M T V L L AYT+ IIPSS+A KW LAYS *FSAKLLC TTKPRPVA Y APP*
Sbjct: 644 MYTKVALGKGL*EAYTIKIIPSSMALTKWLLAYSR*FSAKLLCSTTKPRPVALYLAPP*S 465
Query: 276 IVRP**WLLVPMENV*NTDEKFICIVKKSQIAGRKPCSREFSIIIGNAVKKPSCMMNC*L 455
IVRP W+ VP ENV N+D CIVKKS AGR PCSR FS IG AVK PS ++NC*
Sbjct: 464 IVRPKKWVRVPKENVKNSDPSCNCIVKKSHTAGRNPCSRVFSTTIGRAVKIPSWIINC*F 285
Query: 456 XTVP 467
P
Sbjct: 284 TIAP 273
Score = 113 bits (241), Expect = 2e-024
Identities = 46/100 (46%), Positives = 60/100 (60%)
Frame = -2 / +3
Query: 452 SAVHHTAWLLHCIANDYRELS*TRFPTCYLGFLHNANEFFICVLHIFHGN*EPLLWPDNP 273
SAV++ AW HC N + S* R P+C +G L NA +I +L+I GN P LW D
Sbjct: 288 SAVYNPAWYFHCPPNGC*KYS*ARVPSCSMGLLDNAVAAWITILYILFGNSHPFLWSDYT 467
Query: 272 SWWCKIPCYWPWFCCAAQEFC*KLQAVC*GPLHKGNRAWN 153
SWWC + + FC AQEFC*+L A+C* P +G+ WN
Sbjct: 468 SWWC*VQSHRSRFCGGAQEFC*ELSAIC*KPFCQGH*TWN 587
Score = 111 bits (237), Expect = 7e-024
Identities = 55/124 (44%), Positives = 73/124 (58%)
Frame = +2 / -1
Query: 95 YVNKCILGNNTVCSIHSQYYSKLYCLYEVAPSIQPVIFSKTLVLHNKTTASSTVFCTTMK 274
YV+K L T+ SIH+ SK L ++A SI P++ SKTLVLH+KT +V TTMK
Sbjct: 645 YVHKSSLRQGTMRSIHN*NNSKFNGLDKMASSI*PIVLSKTLVLHHKTATCGSVLSTTMK 466
Query: 275 DCPAIVMALSSHGKCVEHR*KIHLHCEEIPDSR*ETLFKRVLYNHWQCSEEAKLYDELLI 454
P M SS +C E K+ LHC+E+P R E + K + NHW+ SE KL +LLI
Sbjct: 465 YSPTKEMGASSQRECKE**SKLQLHCQEVPYCRKEPVLKSIFNNHWEGSENTKLDYKLLI 286
Query: 455 XNST 466
+ T
Sbjct: 285 YDCT 274
>gb|AC152887.20| Medicago truncatula clone mth2-91j4, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 116277
Score = 224 bits (483), Expect = 9e-058
Identities = 82/149 (55%), Positives = 110/149 (73%)
Frame = -3 / -1
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q ++QLG LPM++E LE+GF A+ DF MQ+ +SVF+TF +GTK+HYYGRT+LH
Sbjct: 97368 QSVVQLGLLLVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLH 97189
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GG+KYR TGRGFVV H FA+NYR+Y+R HF+K +E+ I+L +Y + +++ +Y
Sbjct: 97188 GGSKYRPTGRGFVVFHAKFADNYRMYSRSHFVKGLEILILLIIYEVYGESYRSSTLYFFI 97009
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
IS WFL +SW+ APF FNPSGFDW KTV
Sbjct: 97008 TISMWFLAISWLFAPFLFNPSGFDWQKTV 96922
>gb|AC157648.18| Medicago truncatula clone mth2-68d9, complete sequence
Length = 84361
Score = 224 bits (483), Expect = 9e-058
Identities = 82/149 (55%), Positives = 110/149 (73%)
Frame = -3 / +2
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q ++QLG LPM++E LE+GF A+ DF MQ+ +SVF+TF +GTK+HYYGRT+LH
Sbjct: 76466 QSVVQLGLLLVLPMVMEIGLEKGFRTALGDFIIMQLQLASVFFTFQLGTKAHYYGRTLLH 76645
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GG+KYR TGRGFVV H FA+NYR+Y+R HF+K +E+ I+L +Y + +++ +Y
Sbjct: 76646 GGSKYRPTGRGFVVFHAKFADNYRMYSRSHFVKGLEILILLIIYEVYGESYRSSTLYFFI 76825
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
IS WFL +SW+ APF FNPSGFDW KTV
Sbjct: 76826 TISMWFLAISWLFAPFLFNPSGFDWQKTV 76912
>gb|AC152184.1| Medicago truncatula chromosome 7 BAC clone mte1-61c3, complete
sequence
Length = 103090
Score = 219 bits (472), Expect = 3e-056
Identities = 83/149 (55%), Positives = 110/149 (73%)
Frame = -3 / +1
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q +Q+GF ALPM++E LE+GF A+ +F MQ+ + VF+TFS+GTK+HY+GRT+LH
Sbjct: 8176 QSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLH 8355
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GGAKYR TGRGFVV H FA+NYRLY+R HF+K IEL ++L VY S ++ + YI
Sbjct: 8356 GGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGIELLVLLVVYEIFSHSYRSAVAYILI 8535
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
+S WF+V +W+ APF FNPSGF+W K V
Sbjct: 8536 TVSMWFMVGTWLFAPFLFNPSGFEWQKIV 8622
Score = 103 bits (219), Expect = 2e-021
Identities = 62/143 (43%), Positives = 73/143 (51%)
Frame = +3 / -3
Query: 3 TVFNQSKPDGLKANGAIIHDTTRNQLDIXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
T+F S P+GL NGA T N +D + + L L +YT + SSI K
Sbjct: 8621 TIFCHSNPEGLNKNGANSQVPTMNHIDTVINIYATALLYE*LKISYTTSNTKSSIPLTK* 8442
Query: 183 PLAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLLVPMENV*NTDEKFICIVKKS 362
SL* SA L TT P PV YFAPP* V P * +LVP ENV NT CI S
Sbjct: 8441 LRE*SL*LSANLAWKTTNPLPVGLYFAPP*SSVLPK**VLVPRENVKNTGASCNCISINS 8262
Query: 363 QIAGRKPCSREFSIIIGNAVKKP 431
A RKP S+ SI +G A+K P
Sbjct: 8261 LSAVRKPLSKPISISMGKAIKNP 8193
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
Length = 105353
Score = 219 bits (472), Expect = 3e-056
Identities = 83/149 (55%), Positives = 110/149 (73%)
Frame = -3 / +1
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q +Q+GF ALPM++E LE+GF A+ +F MQ+ + VF+TFS+GTK+HY+GRT+LH
Sbjct: 79573 QSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLH 79752
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GGAKYR TGRGFVV H FA+NYRLY+R HF+K IEL ++L VY S ++ + YI
Sbjct: 79753 GGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGIELLVLLVVYEIFSHSYRSAVAYILI 79932
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
+S WF+V +W+ APF FNPSGF+W K V
Sbjct: 79933 TVSMWFMVGTWLFAPFLFNPSGFEWQKIV 80019
Score = 103 bits (219), Expect = 2e-021
Identities = 62/143 (43%), Positives = 73/143 (51%)
Frame = +3 / -1
Query: 3 TVFNQSKPDGLKANGAIIHDTTRNQLDIXXXM*TSVFLAITLCAAYTVNIIPSSIAFMKW 182
T+F S P+GL NGA T N +D + + L L +YT + SSI K
Sbjct: 80018 TIFCHSNPEGLNKNGANSQVPTMNHIDTVINIYATALLYE*LKISYTTSNTKSSIPLTK* 79839
Query: 183 PLAYSL*FSAKLLCCTTKPRPVARYFAPP*RIVRP**WLLVPMENV*NTDEKFICIVKKS 362
SL* SA L TT P PV YFAPP* V P * +LVP ENV NT CI S
Sbjct: 79838 LRE*SL*LSANLAWKTTNPLPVGLYFAPP*SSVLPK**VLVPRENVKNTGASCNCISINS 79659
Query: 363 QIAGRKPCSREFSIIIGNAVKKP 431
A RKP S+ SI +G A+K P
Sbjct: 79658 LSAVRKPLSKPISISMGKAIKNP 79590
>gb|AC158209.13| Medicago truncatula clone mth2-154h5, complete sequence
Length = 93864
Score = 213 bits (459), Expect = 2e-054
Identities = 79/147 (53%), Positives = 105/147 (71%)
Frame = -3 / -2
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q ++Q+G LPMI+E LE+GF A+ D MQ+ + VF+TFS+GTK HY+GRT+LH
Sbjct: 56042 QSLVQIGLLMTLPMIMEIGLERGFRTALGDLIIMQLQLAPVFFTFSLGTKLHYFGRTLLH 55863
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GGAKYRATGRGFVV+H+ FA+NYR+Y+R HF+K IEL ++L Y + ++ Y
Sbjct: 55862 GGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELALLLICYMIYGAATPDSTAYALL 55683
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLK 8
S WFLV SW+ +PF FNPSGF+W K
Sbjct: 55682 SCSMWFLVGSWLFSPFLFNPSGFEWQK 55602
>gb|AC137603.16| Medicago truncatula clone mth2-14b10, complete sequence
Length = 109793
Score = 212 bits (458), Expect = 2e-054
Identities = 83/149 (55%), Positives = 107/149 (71%)
Frame = -3 / -1
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q +Q+GF ALPM++E LE+GF A+ +F MQ+ + VF+TFS+GTK+HYYGRT+LH
Sbjct: 61886 QSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLH 61707
Query: 268 GGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTLVYIXX 89
GGAKYR TGRGFVV H FA+NYRLY+R HF+K IEL I+L VY ++ L Y+
Sbjct: 61706 GGAKYRPTGRGFVVFHAKFADNYRLYSRSHFVKGIELMILLIVYQIFGNGYRSGLSYLLI 61527
Query: 88 XISSWFLVVSWIMAPFAFNPSGFDWLKTV 2
WF+V +W+ APF FNPSGF+W K V
Sbjct: 61526 TTPMWFMVGTWLYAPFLFNPSGFEWQKIV 61440
Score = 68.9 bits (144), Expect(3) = 3e-028
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -3 / -3
Query: 166 IELGIILTVYAAHSVIAKNTLVYIXXXISSWFLVVSWIMAPFAFNPSGFDWLK 8
+E+ ++L VY A+ L YI ISSWF+ +SW+ AP+ FNPSGF+W K
Sbjct: 576 LEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQK 418
Score = 67.5 bits (141), Expect(3) = 3e-028
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -3 / -2
Query: 376 LPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAK 257
L A+ +F TMQ +VF+TFS+GT++HY+GRTILHGGA+
Sbjct: 2113 LQAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGAR 1994
Score = 42.8 bits (87), Expect(3) = 3e-028
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -3 / -3
Query: 454 NQQFIIQLGFFTALPMIIENSLEQGFL 374
N QF+ Q+G FTA+PM++ LEQGFL
Sbjct: 2415 NTQFLFQIGIFTAVPMVLGFVLEQGFL 2335
>gb|BG449853.1|BG449853 NF053H03IN1F1029 Insect herbivory Medicago truncatula cDNA clone
NF053H03IN 5', mRNA sequence
Length = 646
Score = 138 bits (295), Expect = 7e-032
Identities = 52/92 (56%), Positives = 65/92 (70%)
Frame = -3 / +3
Query: 283 RTILHGGAKYRATGRGFVVQHKSFAENYRLYARGHFIKAIELGIILTVYAAHSVIAKNTL 104
RT+LHGGA+YR TGRGFVV H FA+NYRLY+R HF+K IEL I+L VY + +
Sbjct: 3 RTLLHGGAQYRGTGRGFVVFHAKFADNYRLYSRSHFVKGIELVILLVVYHIFGHAYRGVV 182
Query: 103 VYIXXXISSWFLVVSWIMAPFAFNPSGFDWLK 8
YI I+ WF+ +W+ APF FNPSGF+W K
Sbjct: 183 AYILITITIWFMAGTWLFAPFLFNPSGFEWQK 278
>gb|BF004482.1|BF004482 EST432980 KV1 Medicago truncatula cDNA clone pKV1-17D12, mRNA
sequence
Length = 617
Score = 136 bits (291), Expect = 3e-031
Identities = 52/85 (61%), Positives = 67/85 (78%)
Frame = -3 / +2
Query: 448 QFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILH 269
Q +Q+GF ALPM++E LE+GF A+ +F MQ+ + VF+TFS+GTK+HY+GRT+LH
Sbjct: 362 QSFVQIGFLMALPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYFGRTLLH 541
Query: 268 GGAKYRATGRGFVVQHKSFAENYRL 194
GGAKYR TGRGFVV H FA+NYRL
Sbjct: 542 GGAKYRPTGRGFVVFHAKFADNYRL 616
>gb|AC170583.6| Medicago truncatula clone mth2-19b5, complete sequence
Length = 113632
Score = 68.9 bits (144), Expect(3) = 4e-028
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -3 / +2
Query: 166 IELGIILTVYAAHSVIAKNTLVYIXXXISSWFLVVSWIMAPFAFNPSGFDWLK 8
+E+ ++L VY A+ L YI ISSWF+ +SW+ AP+ FNPSGF+W K
Sbjct: 9704 LEVVLLLIVYLAYGYNDGGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQK 9862
Score = 67.5 bits (141), Expect(3) = 4e-028
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = -3 / +1
Query: 376 LPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAK 257
L A+ +F TMQ +VF+TFS+GT++HY+GRTILHGGA+
Sbjct: 8167 LQAVVNFITMQFQLCTVFFTFSLGTRTHYFGRTILHGGAR 8286
Score = 42.8 bits (87), Expect(3) = 4e-028
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -3 / +2
Query: 454 NQQFIIQLGFFTALPMIIENSLEQGFL 374
N QF+ Q+G FTA+PM++ LEQGFL
Sbjct: 7865 NTQFLFQIGIFTAVPMVLGFVLEQGFL 7945
>gb|CF068458.1|CF068458 EST669179 MTUS Medicago truncatula cDNA clone MTUS-8C4, mRNA
sequence
Length = 714
Score = 79.0 bits (166), Expect(2) = 2e-021
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = -3 / +2
Query: 454 NQQFIIQLGFFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYY 287
N QF++Q+G FTA+PMI+ LE G L A++ F TMQ+ SVF+TFS+GTK+H +
Sbjct: 500 NAQFLVQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTKTHLF 667
Score = 43.7 bits (89), Expect(2) = 2e-021
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -3 / +3
Query: 292 YYGRTILHGGAKYRATG 242
Y+GRT+LHGGAKYRATG
Sbjct: 663 YFGRTVLHGGAKYRATG 713
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 510,250,504
Number of Sequences: 392609
Number of extensions: 7540577
Number of successful extensions: 76626
Number of sequences better than 1.0e-020: 17
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 13402221724
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)