TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCI2h07.yg.2.1
(286 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW692037.2|AW692037 NF046H05ST1F1000 Developing stem Med... 150 6e-036
gb|CA989884.1|CA989884 EST643392 GESD Medicago truncatula c... 150 6e-036
gb|AC150446.8| Medicago truncatula clone mth2-101n14, compl... 150 6e-036
gb|AC140546.11| Medicago truncatula clone mth2-35l19, compl... 150 6e-036
gb|AC148821.1| Medicago truncatula chromosome 2 clone mth2-... 149 1e-035
gb|AC137522.10| Medicago truncatula clone mth2-9h8, complet... 149 1e-035
gb|BI309501.1|BI309501 EST530911 GPOD Medicago truncatula c... 146 7e-035
gb|BI311546.1|BI311546 EST5313296 GESD Medicago truncatula ... 146 7e-035
gb|BI312324.1|BI312324 EST5314074 GESD Medicago truncatula ... 146 7e-035
gb|DW016544.1|DW016544 EST1225505 MTY Medicago truncatula c... 146 7e-035
gb|AC131248.14| Medicago truncatula clone mth2-28n22, compl... 146 7e-035
gb|AC125473.12| Medicago truncatula clone mth2-8j13, comple... 144 4e-034
gb|AC126014.6| Medicago truncatula clone mth2-18j5, complet... 144 4e-034
gb|AC150978.15| Medicago truncatula clone mth2-66m17, compl... 144 4e-034
gb|BF635224.1|BF635224 NF061H04DT1F1043 Drought Medicago tr... 142 1e-033
gb|BI309194.1|BI309194 EST530604 GPOD Medicago truncatula c... 142 1e-033
gb|CX542093.1|CX542093 s13dNF85A12GS097_467494 Germinating ... 99 6e-032
gb|AL368974.1|AL368974 MtBA28A12R1 MtBA Medicago truncatula... 78 8e-032
gb|BM779521.1|BM779521 EST590097 KV2 Medicago truncatula cD... 78 1e-031
gb|BQ124574.1|BQ124574 EST610150 GLSD Medicago truncatula c... 78 1e-031
gb|CA919650.1|CA919650 EST637368 MTUS Medicago truncatula c... 136 1e-031
gb|BE203898.1|BE203898 EST396574 KV0 Medicago truncatula cD... 78 1e-031
gb|CX541216.1|CX541216 s13dNF78E11GS087_465728 Germinating ... 78 1e-031
gb|BQ139724.1|BQ139724 NF023F08PH1F1074 Phoma-infected Medi... 78 1e-031
gb|BE320392.2|BE320392 NF030D08RT1F1062 Developing root Med... 79 2e-031
gb|AC150787.15| Medicago truncatula clone mth2-171n13, comp... 78 3e-031
gb|BQ123644.1|BQ123644 EST609220 GLSD Medicago truncatula c... 78 4e-031
emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-7... 79 9e-031
gb|AC149572.14| Medicago truncatula clone mth2-116e22, comp... 79 9e-031
gb|BI311476.1|BI311476 EST5313226 GESD Medicago truncatula ... 100 2e-030
gb|CX541230.1|CX541230 s13dNF78H10GS092_465756 Germinating ... 79 2e-030
gb|CA919282.1|CA919282 EST637000 MTUS Medicago truncatula c... 79 2e-030
gb|BG648585.1|BG648585 EST510204 HOGA Medicago truncatula c... 79 2e-030
gb|CA918394.1|CA918394 EST642541 GESD Medicago truncatula c... 79 3e-030
gb|AW329632.2|AW329632 N200892e rootphos(-) Medicago trunca... 129 1e-029
gb|BI311236.1|BI311236 EST5312986 GESD Medicago truncatula ... 79 2e-029
gb|AW775761.1|AW775761 EST334826 DSIL Medicago truncatula c... 77 4e-028
gb|CA918393.1|CA918393 EST642540 GESD Medicago truncatula c... 79 5e-027
gb|AJ500002.1|AJ500002 AJ500002 MTGIM Medicago truncatula c... 105 2e-022
emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-4... 62 5e-021
>gb|AW692037.2|AW692037 NF046H05ST1F1000 Developing stem Medicago truncatula cDNA clone
NF046H05ST 5', mRNA sequence
Length = 592
Score = 150 bits (322), Expect = 6e-036
Identities = 60/92 (65%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 87 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 266
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 267 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 362
>gb|CA989884.1|CA989884 EST643392 GESD Medicago truncatula cDNA clone GESD-21H19, mRNA
sequence
Length = 842
Score = 150 bits (322), Expect = 6e-036
Identities = 60/92 (65%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 181 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 360
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 361 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 456
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence
Length = 109162
Score = 150 bits (322), Expect = 6e-036
Identities = 60/92 (65%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 106761 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 106940
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 106941 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 107036
>gb|AC140546.11| Medicago truncatula clone mth2-35l19, complete sequence
Length = 106963
Score = 150 bits (322), Expect = 6e-036
Identities = 60/92 (65%), Positives = 67/92 (72%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 30974 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 31153
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 31154 LIINIVGVVAGISDAINNGYQSWGPLFGKLFF 31249
>gb|AC148821.1| Medicago truncatula chromosome 2 clone mth2-80k8, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 122271
Score = 149 bits (320), Expect = 1e-035
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGVDT+FTVTSK DD EFSELY FKW
Sbjct: 111963 QFWVIGGASSHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSELYVFKWTSLLIPPMTL 112142
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 112143 LIMNIVGVIVGVSDAINNGYDSWGPLFGRLFF 112238
>gb|AC137522.10| Medicago truncatula clone mth2-9h8, complete sequence
Length = 117716
Score = 149 bits (320), Expect = 1e-035
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGVDT+FTVTSK DD EFSELY FKW
Sbjct: 93740 QFWVIGGASSHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSELYVFKWTSLLIPPMTL 93561
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GV+ G+ +AI GY+SWGPLFG+LFF
Sbjct: 93560 LIMNIVGVIVGVSDAINNGYDSWGPLFGRLFF 93465
>gb|BI309501.1|BI309501 EST530911 GPOD Medicago truncatula cDNA clone pGPOD-13G5 5' end,
mRNA sequence
Length = 691
Score = 146 bits (314), Expect = 7e-035
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVT+K DD EF ELY FKW
Sbjct: 691 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTL 512
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI G SWGPLFGKLFF
Sbjct: 511 IILNIVGVVAGVSDAINSGSGSWGPLFGKLFF 416
>gb|BI311546.1|BI311546 EST5313296 GESD Medicago truncatula cDNA clone pGESD13M17 5' end,
mRNA sequence
Length = 811
Score = 146 bits (314), Expect = 7e-035
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVT+K DD EF ELY FKW
Sbjct: 189 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTL 368
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI G SWGPLFGKLFF
Sbjct: 369 IILNIVGVVAGVSDAINSGSGSWGPLFGKLFF 464
>gb|BI312324.1|BI312324 EST5314074 GESD Medicago truncatula cDNA clone pGESD17P11 5' end,
mRNA sequence
Length = 711
Score = 146 bits (314), Expect = 7e-035
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 246 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 425
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAGI +AI GY+SWG LFGKLFF
Sbjct: 426 LIINIVGVVAGISDAINNGYQSWGSLFGKLFF 521
>gb|DW016544.1|DW016544 EST1225505 MTY Medicago truncatula cDNA clone MTYAI54, mRNA
sequence
Length = 787
Score = 146 bits (314), Expect = 7e-035
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVT+K DD EF ELY FKW
Sbjct: 258 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPSTL 437
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI G SWGPLFGKLFF
Sbjct: 438 IILNIVGVVAGVSDAINSGSGSWGPLFGKLFF 533
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence
Length = 136333
Score = 146 bits (314), Expect = 7e-035
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQGLLK +AGVDT+FTVT+K DD EF ELY FKW
Sbjct: 100039 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTL 99860
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG+ +AI G SWGPLFGKLFF
Sbjct: 99859 IILNIVGVVAGVSDAINSGSGSWGPLFGKLFF 99764
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence
Length = 103966
Score = 144 bits (309), Expect = 4e-034
Identities = 56/92 (60%), Positives = 67/92 (72%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD +F++LY FKW
Sbjct: 8470 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGDFADLYIFKWTSLLIPPLTL 8291
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFGKLFF
Sbjct: 8290 LILNIIGVIVGVSDAINNGYDSWGPLFGKLFF 8195
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence
Length = 113200
Score = 144 bits (309), Expect = 4e-034
Identities = 56/92 (60%), Positives = 67/92 (72%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD +F++LY FKW
Sbjct: 91169 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGDFADLYIFKWTSLLIPPLTL 91348
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFGKLFF
Sbjct: 91349 LILNIIGVIVGVSDAINNGYDSWGPLFGKLFF 91444
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence
Length = 125121
Score = 144 bits (309), Expect = 4e-034
Identities = 56/92 (60%), Positives = 67/92 (72%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGG SSHLFA+FQGLLK +AGV+T+FTVTSK DD +F++LY FKW
Sbjct: 889 QFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGDFADLYIFKWTSLLIPPLTL 1068
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N IGV+ G+ +AI GY+SWGPLFGKLFF
Sbjct: 1069 LILNIIGVIVGVSDAINNGYDSWGPLFGKLFF 1164
>gb|BF635224.1|BF635224 NF061H04DT1F1043 Drought Medicago truncatula cDNA clone NF061H04DT
5', mRNA sequence
Length = 668
Score = 142 bits (305), Expect = 1e-033
Identities = 56/92 (60%), Positives = 64/92 (69%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AGVDT+FTVT+K DD EF ELY KW
Sbjct: 262 QFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSL 441
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYESWGPL GK+FF
Sbjct: 442 IIINLVGVVAGFSDALNGGYESWGPLIGKVFF 537
>gb|BI309194.1|BI309194 EST530604 GPOD Medicago truncatula cDNA clone pGPOD-11A9 5' end,
mRNA sequence
Length = 625
Score = 142 bits (305), Expect = 1e-033
Identities = 56/92 (60%), Positives = 64/92 (69%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAVFQG LK +AGVDT+FTVT+K DD EF ELY KW
Sbjct: 134 QFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSL 313
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYESWGPL GK+FF
Sbjct: 314 IIINLVGVVAGFSDALNGGYESWGPLIGKVFF 409
>gb|CX542093.1|CX542093 s13dNF85A12GS097_467494 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 617
Score = 98.7 bits (209), Expect(2) = 6e-032
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKW 158
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 164 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKW 313
Score = 57.0 bits (118), Expect(2) = 6e-032
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3 / +3
Query: 204 IGVVAGIXNAIXXGYESWGPLFGKLFF 284
+GVVAGI +AI GY+SWGPLFGKLFF
Sbjct: 360 VGVVAGISDAINNGYQSWGPLFGKLFF 440
>gb|AL368974.1|AL368974 MtBA28A12R1 MtBA Medicago truncatula cDNA clone MtBA28A12 T7, mRNA
sequence
Length = 449
Score = 77.6 bits (163), Expect(2) = 8e-032
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 287 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 168
Score = 77.1 bits (162), Expect(2) = 8e-032
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / -1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 173 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 9
>gb|BM779521.1|BM779521 EST590097 KV2 Medicago truncatula cDNA clone pKV2-52A8, mRNA
sequence
Length = 569
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 239 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 358
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 353 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 517
>gb|BQ124574.1|BQ124574 EST610150 GLSD Medicago truncatula cDNA clone pGLSD-35N3, mRNA
sequence
Length = 586
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 226 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 345
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 340 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 504
>gb|CA919650.1|CA919650 EST637368 MTUS Medicago truncatula cDNA clone MTUS-16B10, mRNA
sequence
Length = 801
Score = 136 bits (291), Expect = 1e-031
Identities = 54/92 (58%), Positives = 62/92 (67%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IG S+HLFAVFQG LK +AGVDT+FTVT+K DD EF ELY KW
Sbjct: 704 QFWVIGVFSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDAEFGELYMIKWTTLLIPPTSL 525
Query: 189 XXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
N +GVVAG +A+ GYESWGPL GK+FF
Sbjct: 524 IIINLVGVVAGFSDALNGGYESWGPLIGKVFF 429
>gb|BE203898.1|BE203898 EST396574 KV0 Medicago truncatula cDNA clone pKV0-13K7, mRNA
sequence
Length = 611
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 217 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 336
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 331 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 495
>gb|CX541216.1|CX541216 s13dNF78E11GS087_465728 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 611
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 220 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 339
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 334 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 498
>gb|BQ139724.1|BQ139724 NF023F08PH1F1074 Phoma-infected Medicago truncatula cDNA clone
NF023F08PH 5', mRNA sequence
Length = 663
Score = 77.6 bits (163), Expect(2) = 1e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 249 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 368
Score = 77.1 bits (162), Expect(2) = 1e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +3
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 363 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 527
>gb|BE320392.2|BE320392 NF030D08RT1F1062 Developing root Medicago truncatula cDNA clone
NF030D08RT 5', mRNA sequence
Length = 342
Score = 79.4 bits (167), Expect(2) = 2e-031
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 4 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 123
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY FKW N +GVVAGI A+ GY+SWGPLFGKLFF
Sbjct: 118 EDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFF 282
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence
Length = 82665
Score = 77.6 bits (163), Expect(2) = 3e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 49031 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 48912
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / -2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 48917 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 48753
>gb|BQ123644.1|BQ123644 EST609220 GLSD Medicago truncatula cDNA clone pGLSD-32N16, mRNA
sequence
Length = 579
Score = 77.6 bits (163), Expect(2) = 4e-031
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGG S+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 214 QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKANDED 333
Score = 75.3 bits (158), Expect(2) = 4e-031
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFG+LFF
Sbjct: 328 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGELFF 492
>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3, complete
sequence
Length = 133910
Score = 79.4 bits (167), Expect(2) = 9e-031
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +3
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 129357 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 129476
Score = 73.5 bits (154), Expect(2) = 9e-031
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +3 / +3
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY FKW N +GVVAGI A+ GY+SWGPLFGKLFF
Sbjct: 129471 EDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFF 129635
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence
Length = 120017
Score = 79.4 bits (167), Expect(2) = 9e-031
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 93379 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 93498
Score = 73.5 bits (154), Expect(2) = 9e-031
Identities = 28/55 (50%), Positives = 34/55 (61%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY FKW N +GVVAGI A+ GY+SWGPLFGKLFF
Sbjct: 93493 EDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFF 93657
>gb|BI311476.1|BI311476 EST5313226 GESD Medicago truncatula cDNA clone pGESD13A7 5' end,
mRNA sequence
Length = 842
Score = 100 bits (213), Expect(2) = 2e-030
Identities = 40/67 (59%), Positives = 45/67 (67%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXX 188
QFW IGGVS+HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW
Sbjct: 388 QFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTI 567
Query: 189 XXXNFIG 209
N +G
Sbjct: 568 LIINIVG 588
Score = 50.6 bits (104), Expect(2) = 2e-030
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3 / +1
Query: 207 GVVAGIXNAIXXGYESWGPLFGKLFF 284
G++ GI +AI GY+SWGPLFGKLFF
Sbjct: 589 GLLLGISDAINNGYQSWGPLFGKLFF 666
>gb|CX541230.1|CX541230 s13dNF78H10GS092_465756 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 642
Score = 79.4 bits (167), Expect(2) = 2e-030
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 248 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 367
Score = 71.2 bits (149), Expect(2) = 2e-030
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY KW N +GVVAGI AI GY+SWGPLFGKLFF
Sbjct: 362 EDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFF 526
>gb|CA919282.1|CA919282 EST637000 MTUS Medicago truncatula cDNA clone MTUS-11D5, mRNA
sequence
Length = 735
Score = 79.4 bits (167), Expect(2) = 2e-030
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / -2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 626 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 507
Score = 71.2 bits (149), Expect(2) = 2e-030
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = +3 / -2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY KW N +GVVAGI AI GY+SWGPLFGKLFF
Sbjct: 512 EDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFF 348
>gb|BG648585.1|BG648585 EST510204 HOGA Medicago truncatula cDNA clone pHOGA-23O7 5' end,
mRNA sequence
Length = 788
Score = 79.4 bits (167), Expect(2) = 2e-030
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 238 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 357
Score = 71.2 bits (149), Expect(2) = 2e-030
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY KW N +GVVAGI AI GY+SWGPLFGKLFF
Sbjct: 352 EDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFF 516
>gb|CA918394.1|CA918394 EST642541 GESD Medicago truncatula cDNA clone GESD-21C15, mRNA
sequence
Length = 830
Score = 79.4 bits (167), Expect(2) = 3e-030
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / -1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 647 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 528
Score = 71.2 bits (149), Expect(2) = 3e-030
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = +3 / -1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D + +ELY KW N +GVVAGI AI GY+SWGPLFGKLFF
Sbjct: 533 EDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFF 369
>gb|AW329632.2|AW329632 N200892e rootphos(-) Medicago truncatula cDNA clone MHRP-22D5, mRNA
sequence
Length = 495
Score = 129 bits (276), Expect = 1e-029
Identities = 52/82 (63%), Positives = 58/82 (70%)
Frame = +3 / +3
Query: 39 HLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVA 218
HLFAV QGLLK +AG+DT+FTVTSK DDEEF ELY KW N +GVVA
Sbjct: 9 HLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYAIKWTTLLIPPTTILIINIVGVVA 188
Query: 219 GIXNAIXXGYESWGPLFGKLFF 284
GI +AI GY+SWGPLFGKLFF
Sbjct: 189 GISDAINNGYQSWGPLFGKLFF 254
>gb|BI311236.1|BI311236 EST5312986 GESD Medicago truncatula cDNA clone pGESD10E22 5' end,
mRNA sequence
Length = 807
Score = 79.4 bits (167), Expect(2) = 2e-029
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 493 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 612
Score = 68.4 bits (143), Expect(2) = 2e-029
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLF 281
+D + +ELY KW N +GVVAGI AI GY+SWGPLFGKLF
Sbjct: 607 EDGDSAELYMIKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLF 768
>gb|AW775761.1|AW775761 EST334826 DSIL Medicago truncatula cDNA clone pDSIL-3G5, mRNA
sequence
Length = 701
Score = 77.1 bits (162), Expect(3) = 4e-028
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
+D +F+ELY FKW N IG+VAG+ AI GY+SWGPLFGKLFF
Sbjct: 149 EDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSFAINSGYQSWGPLFGKLFF 313
Score = 41.8 bits (85), Expect(3) = 4e-028
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQG 62
QFW IGG S+HLFAVFQG
Sbjct: 34 QFWVIGGTSAHLFAVFQG 87
Score = 40.5 bits (82), Expect(3) = 4e-028
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +3 / +2
Query: 57 QGLLKXIAGVDTSFTVTSKGGDDE 128
+G+LK +AG+DT+FTVTSK D++
Sbjct: 83 KGVLKVLAGIDTNFTVTSKANDED 154
>gb|CA918393.1|CA918393 EST642540 GESD Medicago truncatula cDNA clone GESD-21C15, mRNA
sequence
Length = 807
Score = 79.4 bits (167), Expect(3) = 5e-027
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3 / +1
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDE 128
QFW IGGVS+HLFAVFQGLLK +AG+DT+FTVTSK D++
Sbjct: 448 QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 567
Score = 56.5 bits (117), Expect(3) = 5e-027
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3 / +2
Query: 201 FIGVVAGIXNAIXXGYESWGPLFGKLFF 284
++GVVAGI AI GY+SWGPLFGKLFF
Sbjct: 644 WVGVVAGISYAINSGYQSWGPLFGKLFF 727
Score = 20.3 bits (38), Expect(3) = 5e-027
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 120 DDEEFSELYTFKW 158
+D + +ELY KW
Sbjct: 562 EDGDSAELYMIKW 600
>gb|AJ500002.1|AJ500002 AJ500002 MTGIM Medicago truncatula cDNA clone mtgmacc120011c12,
mRNA sequence
Length = 596
Score = 105 bits (224), Expect = 2e-022
Identities = 43/74 (58%), Positives = 49/74 (66%)
Frame = +3 / -3
Query: 63 LLKXIAGVDTSFTVTSKGGDDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXX 242
LLK +AGVDT+FTVT+K DD EF ELY FKW N +GVVAG+ +AI
Sbjct: 594 LLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINS 415
Query: 243 GYESWGPLFGKLFF 284
G SWGPLFGKLFF
Sbjct: 414 GGGSWGPLFGKLFF 373
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
complete sequence
Length = 122591
Score = 62.0 bits (129), Expect(2) = 5e-021
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3 / +2
Query: 9 QFWXIGGVSSHLFAVFQGLLKXIAGVDTSFTVTSKGGDDEEFSE 140
QFW IGGVS++L+AVF GL K + GV+++F VTSK D+E E
Sbjct: 40097 QFWVIGGVSANLYAVFVGLFKVLTGVNSNFIVTSKSTRDDEDKE 40228
Score = 57.9 bits (120), Expect(2) = 5e-021
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3 / +2
Query: 120 DDEEFSELYTFKWXXXXXXXXXXXXXNFIGVVAGIXNAIXXGYESWGPLFGKLFF 284
D E ++ KW N I +VAG+ +AI G+ESWGPLFGKL F
Sbjct: 40220 DKEHNEIMFGLKWTTLLIIPTTLLILNIIAMVAGLSHAINNGFESWGPLFGKLMF 40384
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 222,851,054
Number of Sequences: 392609
Number of extensions: 1978113
Number of successful extensions: 81783
Number of sequences better than 1.0e-020: 44
length of database: 147,244,331
effective HSP length: 50
effective length of database: 127,613,881
effective search space used: 5615010764
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)