TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAM10b11.yg.2.1
(554 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW773596.1|AW773596 EST332582 KV3 Medicago truncatula cD... 156 2e-037
gb|AL366747.1|AL366747 MtBA09H07F1 MtBA Medicago truncatula... 156 2e-037
gb|BE999807.1|BE999807 EST431530 GVSN Medicago truncatula c... 156 2e-037
gb|BF644133.1|BF644133 NF008F03EC1F1030 Elicited cell cultu... 156 2e-037
gb|CX534082.1|CX534082 s13dNF0PG12MJ088_321926 Methyl Jasmo... 156 3e-037
gb|DW017292.1|DW017292 EST1226253 MTY Medicago truncatula c... 154 1e-036
gb|BM780029.1|BM780029 EST590605 KV2 Medicago truncatula cD... 151 7e-036
gb|DW015729.1|DW015729 EST1224690 MTY Medicago truncatula c... 95 1e-032
gb|BF639602.1|BF639602 NF018D11IN1F1094 Insect herbivory Me... 136 3e-031
gb|BQ138525.1|BQ138525 NF004C04PH1F1024 Phoma-infected Medi... 129 4e-029
gb|AC152350.18| Medicago truncatula clone mth2-72d18, WORKI... 107 5e-028
gb|BG451357.1|BG451357 NF105F06DT1F1057 Drought Medicago tr... 119 4e-026
gb|CX534036.1|CX534036 s13dNF0PC05MJ034_321834 Methyl Jasmo... 119 4e-026
gb|AL369618.1|AL369618 MtBA32C05F1 MtBA Medicago truncatula... 113 3e-024
gb|BF651159.1|BF651159 NF102C01EC1F1004 Elicited cell cultu... 113 3e-024
gb|BG646222.1|BG646222 EST507841 KV3 Medicago truncatula cD... 112 5e-024
gb|BI267615.1|BI267615 NF110D06IN1F1058 Insect herbivory Me... 108 8e-023
gb|BE325124.2|BE325124 NF114F08ST1F1074 Developing stem Med... 108 8e-023
gb|AW691380.1|AW691380 NF040G02ST1F1000 Developing stem Med... 107 1e-022
gb|BF641674.1|BF641674 NF066D11IN1F1093 Insect herbivory Me... 107 1e-022
gb|CA921700.1|CA921700 EST639418 MTUS Medicago truncatula c... 107 1e-022
gb|CB893663.1|CB893663 EST646455 HOGA Medicago truncatula c... 107 1e-022
gb|AW695244.1|AW695244 NF093A09ST1F1068 Developing stem Med... 105 4e-022
gb|BE997686.1|BE997686 EST429409 GVSN Medicago truncatula c... 105 4e-022
gb|BF639994.1|BF639994 NF031A02IN1F1008 Insect herbivory Me... 102 5e-021
gb|BQ137940.1|BQ137940 NF007E12PH1F1098 Phoma-infected Medi... 101 7e-021
gb|AC175049.1| Medicago truncatula chromosome 7 clone mth2-... 85 7e-021
>gb|AW773596.1|AW773596 EST332582 KV3 Medicago truncatula cDNA clone pKV3-15A23, mRNA
sequence
Length = 600
Score = 156 bits (336), Expect = 2e-037
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S RYT DG++D + LK++TGNW+AC ILG E E LA+Y AKNLVTYLT +L
Sbjct: 111 DEESRRYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIAKNLVTYLTRKL 290
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y +GM
Sbjct: 291 HQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIYFIGM 440
>gb|AL366747.1|AL366747 MtBA09H07F1 MtBA Medicago truncatula cDNA clone MtBA09H07 T3, mRNA
sequence
Length = 492
Score = 156 bits (336), Expect = 2e-037
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +1
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S RYT DG++D + LK++TGNW+AC ILG E E LA+Y AKNLVTYLT +L
Sbjct: 151 DEESRRYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIAKNLVTYLTRKL 330
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y +GM
Sbjct: 331 HQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIYFIGM 480
>gb|BE999807.1|BE999807 EST431530 GVSN Medicago truncatula cDNA clone pGVSN-24J9, mRNA
sequence
Length = 697
Score = 156 bits (336), Expect = 2e-037
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +1
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S RYT DG++D + LK++TGNW+AC ILG E E LA+Y AKNLVTYLT +L
Sbjct: 73 DEESRRYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIAKNLVTYLTRKL 252
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y +GM
Sbjct: 253 HQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIYFIGM 402
>gb|BF644133.1|BF644133 NF008F03EC1F1030 Elicited cell culture Medicago truncatula cDNA
clone NF008F03EC 5', mRNA sequence
Length = 628
Score = 156 bits (336), Expect = 2e-037
Identities = 64/110 (58%), Positives = 79/110 (71%)
Frame = +2 / +3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S RYT DG++D + LK++TGNW+AC ILG E E LA+Y AKNLVTYLT +L
Sbjct: 174 DEESRRYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIAKNLVTYLTRKL 353
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y +GM
Sbjct: 354 HQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIYFIGM 503
>gb|CX534082.1|CX534082 s13dNF0PG12MJ088_321926 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 641
Score = 156 bits (335), Expect = 3e-037
Identities = 61/110 (55%), Positives = 79/110 (71%)
Frame = +2 / +1
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S YT DG++D + LK++TGNW+AC ILG E E LA+Y A NLVTYLT +L
Sbjct: 118 DEESKLYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIATNLVTYLTRKL 297
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
E N+ AA +V+TW G+CYL PLI A LAD+YWGRY T+ +F ++Y +GM
Sbjct: 298 HEGNVSAARHVTTWQGTCYLAPLIGAVLADSYWGRYWTIAIFSMIYFIGM 447
>gb|DW017292.1|DW017292 EST1226253 MTY Medicago truncatula cDNA clone MTYAR83, mRNA
sequence
Length = 810
Score = 154 bits (330), Expect = 1e-036
Identities = 60/109 (55%), Positives = 78/109 (71%)
Frame = +2 / +3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S YT DG++D + LK++TGNW+AC ILG E E LA+Y A NLVTYLT +L
Sbjct: 294 DEESKLYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIATNLVTYLTRKL 473
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVG 547
E N+ AA +V+TW G+CYL PLI A LAD+YWGRY T+ +F ++Y +G
Sbjct: 474 HEGNVSAARHVTTWQGTCYLAPLIGAVLADSYWGRYWTIAIFSMIYFIG 620
>gb|BM780029.1|BM780029 EST590605 KV2 Medicago truncatula cDNA clone pKV2-53D8, mRNA
sequence
Length = 812
Score = 151 bits (325), Expect = 7e-036
Identities = 62/108 (57%), Positives = 77/108 (71%)
Frame = +2 / +1
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
DE S RYT DG++D + LK++TGNW+AC ILG E E LA+Y AKNLVTYLT +L
Sbjct: 124 DEESRRYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIAKNLVTYLTRKL 303
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIV 544
+ N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y +
Sbjct: 304 HQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIYFI 447
>gb|DW015729.1|DW015729 EST1224690 MTY Medicago truncatula cDNA clone MTYA891, mRNA
sequence
Length = 714
Score = 95.0 bits (201), Expect(2) = 1e-032
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +2 / +1
Query: 359 ATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLY 538
A KNLVTYLT +L + N AA NV+TW G+CYLTPLI A LAD+Y GRY T+ VF +Y
Sbjct: 277 ALQKNLVTYLTRKLHQGNASAARNVTTWQGTCYLTPLIGAILADSYLGRYWTIAVFSTIY 456
Query: 539 IVGM 550
+GM
Sbjct: 457 FIGM 468
Score = 65.7 bits (137), Expect(2) = 1e-032
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +2 / +3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAK 370
DE S RYT DG++D + LK++TG+W+AC ILG E E LA+Y AK
Sbjct: 138 DEESRRYTGDGSVDFKGRPVLKQNTGSWKACPFILGNECCERLAYYGIAK 287
>gb|BF639602.1|BF639602 NF018D11IN1F1094 Insect herbivory Medicago truncatula cDNA clone
NF018D11IN 5', mRNA sequence
Length = 684
Score = 136 bits (291), Expect = 3e-031
Identities = 54/106 (50%), Positives = 76/106 (71%)
Frame = +2 / +2
Query: 233 SRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETN 412
S +T DG++++ + ++K+ TG W++C ILGT F E LA+Y A NLVTYLT L E
Sbjct: 104 SVHTGDGSVNVKGELSVKRETGTWKSCPFILGTFFCERLAYYGIAANLVTYLTTRLHEGT 283
Query: 413 IDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ AA NV+T+ G+CYLTPLI +F ADTY GRY T+ VF +Y++G+
Sbjct: 284 VSAAKNVTTFQGTCYLTPLIGSFFADTYLGRYWTIAVFYGIYLIGI 421
>gb|BQ138525.1|BQ138525 NF004C04PH1F1024 Phoma-infected Medicago truncatula cDNA clone
NF004C04PH 5', mRNA sequence
Length = 572
Score = 129 bits (276), Expect = 4e-029
Identities = 53/109 (48%), Positives = 70/109 (64%)
Frame = +2 / +3
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + YT DGT+D A +K TG W+AC ILG E E LA+Y + NLV Y L
Sbjct: 93 EEENVYTKDGTVDYLGNPANRKKTGTWKACPFILGNECCERLAYYGMSTNLVLYFKERLH 272
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
+ + A+ NVS W G+CY+TPLI AF+AD+Y GRY T+ F +LY++GM
Sbjct: 273 QHSAVASKNVSNWAGTCYITPLIGAFVADSYLGRYWTIASFSILYVIGM 419
>gb|AC152350.18| Medicago truncatula clone mth2-72d18, WORKING DRAFT SEQUENCE, 6
unordered pieces
Length = 113547
Score = 107 bits (228), Expect(2) = 5e-028
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = +2 / -1
Query: 311 CFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLAD 490
C I G E E LAF+ A NLVTYLT +L E N AA NVS W G+CYLTPLI+A LAD
Sbjct: 375 CM*ITGNECCERLAFFGIATNLVTYLTTKLHENNTSAARNVSIWQGTCYLTPLIAAILAD 196
Query: 491 TYWGRYKTMIVFLLLYIVGM 550
Y GRY T+ VF ++Y V M
Sbjct: 195 GYLGRYWTIAVFSMIYFVVM 136
Score = 46.9 bits (96), Expect(2) = 5e-028
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2 / -2
Query: 215 EDDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEF 337
+D+ +YT DG++D + ALK +TG W+AC ILG F
Sbjct: 695 KDETNEQQYTGDGSVDHKHRPALKANTGKWKACPFILGIFF 573
>gb|BG451357.1|BG451357 NF105F06DT1F1057 Drought Medicago truncatula cDNA clone NF105F06DT
5', mRNA sequence
Length = 606
Score = 119 bits (254), Expect = 4e-026
Identities = 45/111 (40%), Positives = 71/111 (63%)
Frame = +2 / +1
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
+ S T DG++D N + A++ +G W A +IL + LAF+ NLV +LT +
Sbjct: 145 ESESEELTLDGSVDFNGRPAIRAKSGRWSAGTIILLNQCLATLAFFGIGVNLVVFLTRVV 324
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
G+ N +AA NVS W G+ Y+ L+ AFL+D+YWGRYKT VF +++++G++
Sbjct: 325 GQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLM 477
>gb|CX534036.1|CX534036 s13dNF0PC05MJ034_321834 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 645
Score = 119 bits (254), Expect = 4e-026
Identities = 45/111 (40%), Positives = 71/111 (63%)
Frame = +2 / +3
Query: 221 DEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAEL 400
+ S T DG++D N + A++ +G W A +IL + LAF+ NLV +LT +
Sbjct: 174 ESESEELTLDGSVDFNGRPAIRAKSGRWSAGTIILLNQCLATLAFFGIGVNLVVFLTRVV 353
Query: 401 GETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
G+ N +AA NVS W G+ Y+ L+ AFL+D+YWGRYKT VF +++++G++
Sbjct: 354 GQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLM 506
>gb|AL369618.1|AL369618 MtBA32C05F1 MtBA Medicago truncatula cDNA clone MtBA32C05 T3, mRNA
sequence
Length = 481
Score = 113 bits (241), Expect = 3e-024
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +2 / +2
Query: 242 TSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDA 421
T DG +D + L+ S+G WRA I+ E AE A+Y NL+ YLT LG++ A
Sbjct: 59 TVDGVVDFKGRPVLRSSSGGWRAAAFIISVEVAERFAYYGINSNLINYLTGPLGQSTATA 238
Query: 422 ATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
A NV+ W G+ L PL+ AFLAD++ GRY+T+I+ L+YI+ +
Sbjct: 239 AENVNIWSGTASLLPLLGAFLADSFLGRYRTIIIASLVYILAL 367
>gb|BF651159.1|BF651159 NF102C01EC1F1004 Elicited cell culture Medicago truncatula cDNA
clone NF102C01EC 5', mRNA sequence
Length = 423
Score = 113 bits (241), Expect = 3e-024
Identities = 45/103 (43%), Positives = 65/103 (63%)
Frame = +2 / +2
Query: 242 TSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDA 421
T DG +D + L+ S+G WRA I+ E AE A+Y NL+ YLT LG++ A
Sbjct: 38 TVDGVVDFKGRPVLRSSSGGWRAAAFIISVEVAERFAYYGINSNLINYLTGPLGQSTATA 217
Query: 422 ATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
A NV+ W G+ L PL+ AFLAD++ GRY+T+I+ L+YI+ +
Sbjct: 218 AENVNIWSGTASLLPLLGAFLADSFLGRYRTIIIASLVYILAL 346
>gb|BG646222.1|BG646222 EST507841 KV3 Medicago truncatula cDNA clone pKV3-48H16 5' end,
mRNA sequence
Length = 749
Score = 112 bits (239), Expect = 5e-024
Identities = 43/101 (42%), Positives = 69/101 (68%)
Frame = +2 / +2
Query: 248 DGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAAT 427
DG +D N Q A++ +G WR+ + I+G E AE +++Y NL++YLT L ++ AA
Sbjct: 119 DGAVDYNGQPAVRFKSGYWRSAWFIIGVEVAERVSYYGIQGNLISYLTGPLKQSTATAAK 298
Query: 428 NVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
NV+ W G+ L PL+ AF+AD++ GRY+T+I+ L+YI+G+
Sbjct: 299 NVNVWAGTASLLPLLGAFVADSFLGRYRTIILASLIYILGL 421
>gb|BI267615.1|BI267615 NF110D06IN1F1058 Insect herbivory Medicago truncatula cDNA clone
NF110D06IN 5', mRNA sequence
Length = 644
Score = 108 bits (230), Expect = 8e-023
Identities = 42/88 (47%), Positives = 58/88 (65%)
Frame = +2 / +2
Query: 281 LKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYL 460
++ TG W+AC ILG E E LA+Y + NLV Y L + + A+ NVS W G+CY+
Sbjct: 146 IRXKTGTWKACPFILGNECCERLAYYGMSTNLVLYFKERLHQHSAVASKNVSNWAGTCYI 325
Query: 461 TPLISAFLADTYWGRYKTMIVFLLLYIV 544
TPLI AF+AD+Y GRY T+ F +LY++
Sbjct: 326 TPLIGAFVADSYLGRYWTIASFSILYVI 409
>gb|BE325124.2|BE325124 NF114F08ST1F1074 Developing stem Medicago truncatula cDNA clone
NF114F08ST 5', mRNA sequence
Length = 388
Score = 108 bits (230), Expect = 8e-023
Identities = 43/98 (43%), Positives = 62/98 (63%)
Frame = +2 / +3
Query: 251 GTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNIDAATN 430
G +D + L+ S+G WRA I+ E AE A+Y NL+ YLT LG++ AA N
Sbjct: 90 GVVDFKGRPVLRSSSGGWRAAAFIISVEVAERFAYYGINSNLINYLTGPLGQSTATAAEN 269
Query: 431 VSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIV 544
V+ W G+ L PL+ AFLAD++ GRY+T+I+ L+YI+
Sbjct: 270 VNIWSGTASLLPLLGAFLADSFLGRYRTIIITSLVYIL 383
>gb|AW691380.1|AW691380 NF040G02ST1F1000 Developing stem Medicago truncatula cDNA clone
NF040G02ST 5', mRNA sequence
Length = 669
Score = 107 bits (229), Expect = 1e-022
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +2 / +2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + T DG++D + + +++ ++G W A +IL + LAF+ NLV +LT LG
Sbjct: 125 EETEELTLDGSVDWHGRPSIRATSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLG 304
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
+ N AA NVS W G+ Y+ L+ AFL+D+YWGRYKT +F +++ G++
Sbjct: 305 QDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLV 454
>gb|BF641674.1|BF641674 NF066D11IN1F1093 Insect herbivory Medicago truncatula cDNA clone
NF066D11IN 5', mRNA sequence
Length = 655
Score = 107 bits (229), Expect = 1e-022
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +2 / +3
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + T DG++D + + +++ ++G W A +IL + LAF+ NLV +LT LG
Sbjct: 123 EETEELTLDGSVDWHGRPSIRATSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLG 302
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
+ N AA NVS W G+ Y+ L+ AFL+D+YWGRYKT +F +++ G++
Sbjct: 303 QDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLV 452
>gb|CA921700.1|CA921700 EST639418 MTUS Medicago truncatula cDNA clone MTUS-43D6, mRNA
sequence
Length = 757
Score = 107 bits (229), Expect = 1e-022
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +2 / +2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + T DG++D + + +++ ++G W A +IL + LAF+ NLV +LT LG
Sbjct: 86 EETEELTLDGSVDWHGRPSIRATSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLG 265
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
+ N AA NVS W G+ Y+ L+ AFL+D+YWGRYKT +F +++ G++
Sbjct: 266 QDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLV 415
>gb|CB893663.1|CB893663 EST646455 HOGA Medicago truncatula cDNA clone HOGA-28J11, mRNA
sequence
Length = 805
Score = 107 bits (229), Expect = 1e-022
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +2 / +2
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + T DG++D + + +++ ++G W A +IL + LAF+ NLV +LT LG
Sbjct: 14 EETEELTLDGSVDWHGRPSIRATSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLG 193
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
+ N AA NVS W G+ Y+ L+ AFL+D+YWGRYKT +F +++ G++
Sbjct: 194 QDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLV 343
>gb|AW695244.1|AW695244 NF093A09ST1F1068 Developing stem Medicago truncatula cDNA clone
NF093A09ST 5', mRNA sequence
Length = 652
Score = 105 bits (225), Expect = 4e-022
Identities = 43/112 (38%), Positives = 69/112 (61%)
Frame = +2 / +1
Query: 218 DDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAE 397
++E + T DG++D + ALK S+G WR+ ++L + +AF NLV +
Sbjct: 223 EEEGINSCTKDGSVDFYGKPALKNSSGRWRSATLLLVNQGLVAVAFAGVEANLVIFCKLV 402
Query: 398 LGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
L +TN++AA S W+G+ Y LI AFL+D+Y GRY T I+F L++I+G++
Sbjct: 403 LKQTNVEAANTFSIWMGTTYFFSLIGAFLSDSYLGRYLTCIIFQLVFIIGLV 558
>gb|BE997686.1|BE997686 EST429409 GVSN Medicago truncatula cDNA clone pGVSN-1J2, mRNA
sequence
Length = 434
Score = 105 bits (225), Expect = 4e-022
Identities = 43/112 (38%), Positives = 69/112 (61%)
Frame = +2 / +2
Query: 218 DDEASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAE 397
++E + T DG++D + ALK S+G WR+ ++L + +AF NLV +
Sbjct: 38 EEEGINSCTKDGSVDFYGKPALKNSSGRWRSATLLLVNQGLVAVAFAGVEANLVIFCKLV 217
Query: 398 LGETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGML 553
L +TN++AA S W+G+ Y LI AFL+D+Y GRY T I+F L++I+G++
Sbjct: 218 LKQTNVEAANTFSIWMGTTYFFSLIGAFLSDSYLGRYLTCIIFQLVFIIGLV 373
>gb|BF639994.1|BF639994 NF031A02IN1F1008 Insect herbivory Medicago truncatula cDNA clone
NF031A02IN 5', mRNA sequence
Length = 438
Score = 102 bits (217), Expect = 5e-021
Identities = 42/101 (41%), Positives = 63/101 (62%)
Frame = +2 / +1
Query: 224 EASSRYTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELG 403
E + T DG++D + + +++ ++G W A +IL + LAF+ NLV +LT LG
Sbjct: 124 EETEELTLDGSVDWHGRPSIRATSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLG 303
Query: 404 ETNIDAATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVF 526
+ N AA NVS W G+ Y+ L+ AFL+D+YWGRYKT +F
Sbjct: 304 QDNAAAANNVSKWTGTXYIFSLVGAFLSDSYWGRYKTCAIF 426
>gb|BQ137940.1|BQ137940 NF007E12PH1F1098 Phoma-infected Medicago truncatula cDNA clone
NF007E12PH 5', mRNA sequence
Length = 672
Score = 101 bits (216), Expect = 7e-021
Identities = 35/104 (33%), Positives = 64/104 (61%)
Frame = +2 / +3
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILGTEFAECLAFYATAKNLVTYLTAELGETNID 418
YT DGT+++ + L+ TG W+AC ++ E E +A+Y + NL+ T +L +
Sbjct: 78 YTEDGTVNLKGKPVLRSKTGGWKACSFVVVYEVFERMAYYGISSNLILLFTKKLHQGTXT 257
Query: 419 AATNVSTWIGSCYLTPLISAFLADTYWGRYKTMIVFLLLYIVGM 550
A NV+ W+G+ ++TP++ A++AD + GR+ T ++ +Y+ GM
Sbjct: 258 AXNNVTNWVGTIWMTPILGAYVADAHLGRFWTFLIASFIYLSGM 389
>gb|AC175049.1| Medicago truncatula chromosome 7 clone mth2-90h6, *** SEQUENCING IN
PROGRESS ***, 6 unordered pieces
Length = 115143
Score = 85.4 bits (180), Expect(2) = 7e-021
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +2 / +2
Query: 323 LGTEFAECLAFYATAKNLVTYLTAELGETNIDAATNVSTWIGSCYLTPLISAFLADTYWG 502
+G E E +A+Y A NLV YLT +L + ++A+ NVS W GS ++ PL+ A++AD Y+G
Sbjct: 47840 IGYEVFERMAYYGIASNLVIYLTNKLHQGTVEASNNVSNWAGSVWMMPLVGAYIADAYFG 48019
Query: 503 RYKTMIVFLLLYIV 544
RY T +V +Y++
Sbjct: 48020 RYWTFVVASCIYLL 48061
Score = 44.6 bits (91), Expect(2) = 7e-021
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 239 YTSDGTLDINKQRALKKSTGNWRACFMILG 328
YT DGT+D+ + L+ +TG WRAC I+G
Sbjct: 24928 YTEDGTVDLKGRPVLRSNTGRWRACSFIVG 25017
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 520,655,636
Number of Sequences: 392609
Number of extensions: 6567001
Number of successful extensions: 49050
Number of sequences better than 1.0e-020: 35
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 16563123074
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)