TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAF31c07.yg.2.1
         (352 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CX526462.1|CX526462  s13dNF46B03AT029_510668 Aphid-Infect...    81   2e-031
gb|AC148776.12|  Medicago truncatula clone mth2-39g6, comple...    88   2e-026
emb|CT573026.4|  Medicago truncatula chromosome 3 clone MTH2...    88   2e-026
gb|AC135312.14|  Medicago truncatula clone mth2-34c3, WORKIN...    88   3e-026
gb|AC130653.31|  Medicago truncatula clone mth1-13b3, comple...    88   3e-026
gb|AC165429.2|  Medicago truncatula chromosome 7 clone mth2-...    81   5e-024
gb|AC158502.3|  Medicago truncatula chromosome 7 BAC clone m...    81   5e-024
gb|BI308316.1|BI308316  EST529726 GPOD Medicago truncatula c...    59   2e-008
gb|CG939320.1|CG939320  MBEEN74TFB mth2 Medicago truncatula ...    59   3e-008
gb|CG949724.1|CG949724  MBEEN39TFB mth2 Medicago truncatula ...    59   3e-008
gb|CG972015.1|CG972015  MBEGP34TR mth2 Medicago truncatula g...    40   0.011
gb|AW695452.2|AW695452  NF094H09ST1F1079 Developing stem Med...    27   0.032
gb|CA918739.1|CA918739  EST636457 MTUS Medicago truncatula c...    35   0.67 
gb|CX537743.1|CX537743  s13dNF25A05GS033_458722 Germinating ...    35   0.67 
emb|CR301320.1|  mte1-2I9FM1 BAC end, cultivar Jemalong A17 ...    24   6.5  
gb|CG937573.1|CG937573  MBEIQ52TF mth2 Medicago truncatula g...    31   8.5  
emb|CR334354.1|  mte1-64P17RM2 BAC end, cultivar Jemalong A1...    31   8.5  
emb|CR334629.1|  mte1-64P16RM2 BAC end, cultivar Jemalong A1...    31   8.5  
gb|AW329250.2|AW329250  N200468e rootphos(-) Medicago trunca...    31   8.5  
gb|AL384018.1|AL384018  MtBC18D05F1 MtBC Medicago truncatula...    31   8.5  
gb|AW686828.2|AW686828  NF043G10NR1F1000 Nodulated root Medi...    31   8.5  
gb|CA921132.1|CA921132  EST638850 MTUS Medicago truncatula c...    31   8.5  
>gb|CX526462.1|CX526462 s13dNF46B03AT029_510668 Aphid-Infected Shoots Medicago truncatula
           cDNA, mRNA sequence
          Length = 617

 Score = 81.3 bits (171), Expect(2) = 2e-031
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +3 / +3

                                                            
Query: 3   ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
           ICIT STSAGL Q LPW+YYH V+GVS F L VEG+AA P  + VLE+I
Sbjct: 189 ICITTSTSAGLEQTLPWIYYHKVMGVSSFLLFVEGKAASPNVSRVLETI 335

 Score = 73.9 bits (155), Expect(2) = 2e-031
 Identities = 32/61 (52%), Positives = 36/61 (59%)
 Frame = +1 / +3

                                                                       
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXRE 330
           SRIWNET  +  FYKP  YEL   Q LNMEM I+M RD+ MD I    TD  I     +E
Sbjct: 390 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMARDSGMDWIIHLDTDELIHPAGTQE 569

            
Query: 331 Y 333
           Y
Sbjct: 570 Y 572

 Score = 51.0 bits (105), Expect(2) = 2e-012
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -1 / -2

                                                          
Query: 142 SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
           S+T    G AA PST  KK ETP+TL**  HG +  +PA+VL VI I
Sbjct: 328 SKTLDTLGEAAFPSTKSKKLETPITL***IHGSVCSKPAEVLVVIHI 188

 Score = 40.0 bits (81), Expect(2) = 2e-012
 Identities = 25/61 (40%), Positives = 29/61 (47%)
 Frame = -3 / -2

                                                                       
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMR 153
           YS        SSV   M  S+  SL +   ISMF  C   +S*  GL*     QVSF +R
Sbjct: 571 YSCVPAGCISSSVSRWMIQSMPESLAMTIAISMFKDCFTNNS*LQGL*KKLDNQVSFHIR 392

            
Query: 152 L 150
           L
Sbjct: 391 L 389

 Score = 39.1 bits (79), Expect = 0.028
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2 / -1

                                                             
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAA 151
           IS    D IH+ IP H+N HFHV  LL    +    V+     S +P  A
Sbjct: 539 ISVQMDDPIHARIPCHDNCHFHVQRLLYK*LIVTRFVEEA*QPSFVPYTA 390

 Score = 34.1 bits (68), Expect = 0.92
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +2 / +1

                                                             
Query: 152 AAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXGMLEWIXSXXXILM 301
           A +G +L  Q   T+    +   S  *TWK  L   G+L WI S    LM
Sbjct: 391 AVYGTKLGCQASSTNLVTMSYL*SNL*TWKWQLSWQGILAWIGSSIWTLM 540
>gb|AC148776.12| Medicago truncatula clone mth2-39g6, complete sequence
          Length = 109378

 Score = 87.7 bits (185), Expect(2) = 2e-026
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +3 / +3

                                                               
Query: 3      ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
              IC+T STSAGL QILPW++YH VIGV++FFL VEG+AA P  + VLESI
Sbjct: 107721 ICVTSSTSAGLEQILPWMFYHKVIGVTNFFLFVEGKAATPEVSKVLESI 107867

 Score = 58.8 bits (122), Expect(2) = 2e-026
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / +2

                                                   
Query: 151    SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
              SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 108950 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 109060

 Score = 57.0 bits (118), Expect(2) = 2e-013
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = -1 / -1

                                                               
Query: 148    IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
              IDS+T   +G AA PST RKK  TPMTL**   GRI   PA+VL V QI
Sbjct: 107866 IDSKTFDTSGVAAFPSTKRKKFVTPMTL**NIQGRICSSPAEVLLVTQI 107720

 Score = 46.0 bits (94), Expect(2) = 2e-013
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / -1

                                                    
Query: 261    PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
              P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 109060 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 108947

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / -2

                                                        
Query: 275    SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
              +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 109074 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 108949

 Score = 33.6 bits (67), Expect(2) = 0.010
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / +1

                                                       
Query: 150    QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
              QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 108949 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 109071

 Score = 32.2 bits (64), Expect(2) = 1.1
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / +3

                                                      
Query: 143    IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
              + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 108942 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 109061

 Score = 32.2 bits (64), Expect(2) = 0.010
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2 / +2

                                                    
Query: 2      DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
              DL H  ++     DSS+ VLSQ HW     S+    GC
Sbjct: 107720 DLCHK*YLSRARADSSLDVLSQSHWSDKLFSLCGGEGC 107833

 Score = 26.3 bits (51), Expect(2) = 1.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2 / +3

                                                   
Query: 35    TPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IY 148
             T  S M V    H CFTF  ++ ++   A+    S* Y
Sbjct: 56478 TKSSKMGV*HSSHMCFTFSKVTRKKQLTAAYVSIS*FY 56591
>emb|CT573026.4| Medicago truncatula chromosome 3 clone MTH2-39M4, WORKING DRAFT SEQUENCE
          Length = 109385

 Score = 87.7 bits (185), Expect(2) = 2e-026
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +3 / +1

                                                               
Query: 3      ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
              IC+T STSAGL QILPW++YH VIGV++FFL VEG+AA P  + VLESI
Sbjct: 107722 ICVTSSTSAGLEQILPWMFYHKVIGVTNFFLFVEGKAATPEVSKVLESI 107868

 Score = 58.8 bits (122), Expect(2) = 2e-026
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / +3

                                                   
Query: 151    SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
              SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 108951 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 109061

 Score = 57.0 bits (118), Expect(2) = 2e-013
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = -1 / -1

                                                               
Query: 148    IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
              IDS+T   +G AA PST RKK  TPMTL**   GRI   PA+VL V QI
Sbjct: 107867 IDSKTFDTSGVAAFPSTKRKKFVTPMTL**NIQGRICSSPAEVLLVTQI 107721

 Score = 46.0 bits (94), Expect(2) = 2e-013
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / -1

                                                    
Query: 261    PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
              P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 109061 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 108948

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / -2

                                                        
Query: 275    SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
              +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 109075 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 108950

 Score = 33.6 bits (67), Expect(2) = 0.010
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / +2

                                                       
Query: 150    QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
              QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 108950 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 109072

 Score = 32.2 bits (64), Expect(2) = 1.1
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / +1

                                                      
Query: 143    IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
              + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 108943 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 109062

 Score = 32.2 bits (64), Expect(2) = 0.010
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2 / +3

                                                    
Query: 2      DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
              DL H  ++     DSS+ VLSQ HW     S+    GC
Sbjct: 107721 DLCHK*YLSRARADSSLDVLSQSHWSDKLFSLCGGEGC 107834

 Score = 26.3 bits (51), Expect(2) = 1.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2 / +2

                                                   
Query: 35    TPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IY 148
             T  S M V    H CFTF  ++ ++   A+    S* Y
Sbjct: 56480 TKSSKMGV*HSSHMCFTFSKVTRKKQLTAAYVSIS*FY 56593
>gb|AC135312.14| Medicago truncatula clone mth2-34c3, WORKING DRAFT SEQUENCE, 4 ordered
             pieces
          Length = 125828

 Score = 87.7 bits (185), Expect(2) = 3e-026
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +3 / -1

                                                              
Query: 3     ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
             IC+T STSAGL QILPW++YH VIGV++FFL VEG+AA P  + VLESI
Sbjct: 99143 ICVTSSTSAGLEQILPWMFYHKVIGVTNFFLFVEGKAATPEVSKVLESI 98997

 Score = 58.8 bits (122), Expect(2) = 3e-026
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / -3

                                                  
Query: 151   SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
             SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 97914 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 97804

 Score = 57.0 bits (118), Expect(2) = 2e-013
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = -1 / +1

                                                              
Query: 148   IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
             IDS+T   +G AA PST RKK  TPMTL**   GRI   PA+VL V QI
Sbjct: 98998 IDSKTFDTSGVAAFPSTKRKKFVTPMTL**NIQGRICSSPAEVLLVTQI 99144

 Score = 46.0 bits (94), Expect(2) = 2e-013
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / +1

                                                   
Query: 261   PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
             P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 97804 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 97917

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / +2

                                                       
Query: 275   SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
             +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 97790 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 97915

 Score = 33.6 bits (67), Expect(2) = 0.011
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / -2

                                                      
Query: 150   QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
             QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 97915 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 97793

 Score = 32.2 bits (64), Expect(2) = 2.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / -1

                                                     
Query: 143   IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
             + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 97922 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 97803

 Score = 32.2 bits (64), Expect(2) = 0.011
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2 / -3

                                                   
Query: 2     DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
             DL H  ++     DSS+ VLSQ HW     S+    GC
Sbjct: 99144 DLCHK*YLSRARADSSLDVLSQSHWSDKLFSLCGGEGC 99031

 Score = 25.4 bits (49), Expect(2) = 2.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1 / -2

                                      
Query: 1     RSVSREAHLLAYTRFFHGCIITMSL 75
             R VS+       +RFF GC IT SL
Sbjct: 99145 RFVSQVVPQQGSSRFFPGCFITKSL 99071
>gb|AC130653.31| Medicago truncatula clone mth1-13b3, complete sequence
          Length = 166135

 Score = 87.7 bits (185), Expect(2) = 3e-026
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +3 / -2

                                                              
Query: 3     ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
             IC+T STSAGL QILPW++YH VIGV++FFL VEG+AA P  + VLESI
Sbjct: 51933 ICVTSSTSAGLEQILPWMFYHKVIGVTNFFLFVEGKAATPEVSKVLESI 51787

 Score = 58.8 bits (122), Expect(2) = 3e-026
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / -1

                                                  
Query: 151   SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
             SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 50704 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 50594

 Score = 57.0 bits (118), Expect(2) = 3e-013
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = -1 / +2

                                                              
Query: 148   IDSRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
             IDS+T   +G AA PST RKK  TPMTL**   GRI   PA+VL V QI
Sbjct: 51788 IDSKTFDTSGVAAFPSTKRKKFVTPMTL**NIQGRICSSPAEVLLVTQI 51934

 Score = 46.0 bits (94), Expect(2) = 3e-013
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / +2

                                                   
Query: 261   PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
             P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 50594 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 50707

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / +3

                                                       
Query: 275   SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
             +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 50580 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 50705

 Score = 33.6 bits (67), Expect(2) = 0.015
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / -3

                                                      
Query: 150   QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
             QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 50705 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 50583

 Score = 32.2 bits (64), Expect(2) = 1.6
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / -2

                                                     
Query: 143   IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
             + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 50712 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 50593

 Score = 32.2 bits (64), Expect(2) = 0.015
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2 / -1

                                                   
Query: 2     DLYHGKHICWPTPDSSMVVLSQCHWCFTFLSIS*RRGC 115
             DL H  ++     DSS+ VLSQ HW     S+    GC
Sbjct: 51934 DLCHK*YLSRARADSSLDVLSQSHWSDKLFSLCGGEGC 51821

 Score = 26.3 bits (51), Expect(2) = 1.6
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2 / -2

                                                    
Query: 35     TPDSSMVVLSQCHWCFTFLSIS*RRGCKASXXLCS*IY 148
              T  S M V    H CFTF  ++ ++   A+    S* Y
Sbjct: 103176 TKSSKMGV*HSSHMCFTFSKVTRKKQLTAAYVSIS*FY 103063
>gb|AC165429.2| Medicago truncatula chromosome 7 clone mth2-59p23, *** SEQUENCING IN
            PROGRESS ***, 3 ordered pieces
          Length = 106073

 Score = 81.3 bits (171), Expect(2) = 5e-024
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +3 / +2

                                                             
Query: 3    ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
            ICIT STSAGL Q LPW+YYH V+GVS F L VEG+AA P  + VLE+I
Sbjct: 6710 ICITTSTSAGLEQTLPWIYYHKVMGVSSFLLFVEGKAASPNVSRVLETI 6856

 Score = 57.4 bits (119), Expect(2) = 5e-024
 Identities = 23/37 (62%), Positives = 25/37 (67%)
 Frame = +1 / +3

                                                 
Query: 151  SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
            SRIWNET  +  FYKP  YEL   Q LNMEM I+M R
Sbjct: 7941 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMAR 8051

 Score = 51.0 bits (105), Expect(2) = 1e-007
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -1 / -3

                                                           
Query: 142  SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
            S+T    G AA PST  KK ETP+TL**  HG +  +PA+VL VI I
Sbjct: 6849 SKTLDTLGEAAFPSTKSKKLETPITL***IHGSVCSKPAEVLVVIHI 6709

 Score = 32.2 bits (64), Expect(2) = 1e-007
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3 / -2

                                                  
Query: 263  SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
            +L +   ISMF  C   +S*  GL*     QVSF +RL
Sbjct: 8053 TLAMTIAISMFKDCFTNNS*LQGL*KKLDNQVSFHIRL 7940
>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete sequence
          Length = 124955

 Score = 81.3 bits (171), Expect(2) = 5e-024
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +3 / +3

                                                               
Query: 3      ICITGSTSAGLHQILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLESI 149
              ICIT STSAGL Q LPW+YYH V+GVS F L VEG+AA P  + VLE+I
Sbjct: 107673 ICITTSTSAGLEQTLPWIYYHKVMGVSSFLLFVEGKAASPNVSRVLETI 107819

 Score = 57.4 bits (119), Expect(2) = 5e-024
 Identities = 23/37 (62%), Positives = 25/37 (67%)
 Frame = +1 / +1

                                                   
Query: 151    SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
              SRIWNET  +  FYKP  YEL   Q LNMEM I+M R
Sbjct: 108904 SRIWNETWLSSFFYKPCNYELFVKQSLNMEMAIVMAR 109014

 Score = 51.0 bits (105), Expect(2) = 1e-007
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -1 / -2

                                                             
Query: 142    SRTEVXAGFAASPSTNRKKCETPMTL**YNHGRIWCRPADVLPVIQI 2
              S+T    G AA PST  KK ETP+TL**  HG +  +PA+VL VI I
Sbjct: 107812 SKTLDTLGEAAFPSTKSKKLETPITL***IHGSVCSKPAEVLVVIHI 107672

 Score = 32.2 bits (64), Expect(2) = 1e-007
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3 / -1

                                                    
Query: 263    SLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
              +L +   ISMF  C   +S*  GL*     QVSF +RL
Sbjct: 109016 TLAMTIAISMFKDCFTNNS*LQGL*KKLDNQVSFHIRL 108903
>gb|BI308316.1|BI308316 EST529726 GPOD Medicago truncatula cDNA clone pGPOD-2B20 5' end,
           mRNA sequence
          Length = 698

 Score = 59.3 bits (123), Expect = 2e-008
 Identities = 26/51 (50%), Positives = 29/51 (56%)
 Frame = +1 / +3

                                                              
Query: 181 GXFYKPXXYELXXXQXLNMEMXIIMXRDARMDXIXXXXTDXXIXXXXXREY 333
           G FYKP  YEL   Q LNMEM I+M RD+ MD I    TD  I     +EY
Sbjct: 3   GFFYKPCNYELFVKQSLNMEMAIVMARDSGMDWIIHLDTDELIHPAGTQEY 155

 Score = 35.4 bits (71), Expect = 0.36
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -2 / -1

                                      
Query: 300 ISXXXXDXIHSSIPXHNNXHFHV*XLL 220
           IS    D IH+ IP H+N HFHV  LL
Sbjct: 122 ISVQMDDPIHARIPCHDNCHFHVQRLL 42

 Score = 32.7 bits (65), Expect = 2.4
 Identities = 20/51 (39%), Positives = 23/51 (45%)
 Frame = -3 / -2

                                                              
Query: 332 YSRXXXXXXXSSVXXXMXXSILASLXIIXXISMFXXCXXXSS*XXGL*XXP 180
           YS        SSV   M  S+  SL +   ISMF  C   +S*  GL*  P
Sbjct: 154 YSCVPAGCISSSVSRWMIQSMPESLAMTIAISMFKDCFTNNS*LQGL*KKP 2
>gb|CG939320.1|CG939320 MBEEN74TFB mth2 Medicago truncatula genomic clone 39M4, DNA
           sequence
          Length = 880

 Score = 58.8 bits (122), Expect = 3e-008
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / -3

                                                
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
           SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 434 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 324

 Score = 46.0 bits (94), Expect = 2e-004
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / +3

                                                 
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
           P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 324 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 437

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / +1

                                                     
Query: 275 SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
           +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 310 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 435

 Score = 33.6 bits (67), Expect = 1.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / -2

                                                    
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
           QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 435 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 313

 Score = 32.2 bits (64), Expect = 3.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / -1

                                                   
Query: 143 IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
           + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 442 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 323
>gb|CG949724.1|CG949724 MBEEN39TFB mth2 Medicago truncatula genomic clone 39G6, DNA
           sequence
          Length = 868

 Score = 58.8 bits (122), Expect = 3e-008
 Identities = 24/37 (64%), Positives = 25/37 (67%)
 Frame = +1 / -3

                                                
Query: 151 SRIWNETXXAGXFYKPXXYELXXXQXLNMEMXIIMXR 261
           SRIWNET  A  FYKP  YEL   Q LNMEM I+M R
Sbjct: 434 SRIWNETWLASFFYKPCNYELFVKQSLNMEMAIVMAR 324

 Score = 46.0 bits (94), Expect = 2e-004
 Identities = 18/38 (47%), Positives = 21/38 (55%)
 Frame = -2 / +3

                                                 
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVKXTCXXSLIPNAAE 148
           P HNN H H+  LL   FV   LVK  C   L+PN A+
Sbjct: 324 PCHNNSHLHIEGLLYKKFVIAWLVKEACQPCLVPNTAD 437

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -3 / +1

                                                     
Query: 275 SILASLXIIXXISMFXXCXXXSS*XXGL*XXPAXQVSFQMRL 150
           +I  +L I   IS+   C   SS*  GL*   A  VSFQ+RL
Sbjct: 310 TICHTLAITIAISILRDCFTKSS*LHGL*KKLASHVSFQIRL 435

 Score = 33.6 bits (67), Expect = 1.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3 / -2

                                                    
Query: 150 QPHLE*DLXSRXXLQAXXLRTXXXAXXKHGNXXYYXXGC*N 272
           QP+LE D+  +  LQA  LRT   A  ++G+   Y  G  N
Sbjct: 435 QPYLERDMAGKLLLQAMQLRTFCKAIPQYGDGYCYGKGMAN 313

 Score = 32.2 bits (64), Expect = 3.3
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +2 / -1

                                                   
Query: 143 IYSAAFGMRLXXQVXFTSXXITNXXXSXX*TWKXXLLXXG 262
           + SA FG R   Q  FTS  ITN   S    W+  LL  G
Sbjct: 442 VASAVFGTRHGWQASFTSHAITNFL*SNPSIWRWLLLWQG 323
>gb|CG972015.1|CG972015 MBEGP34TR mth2 Medicago truncatula genomic clone 51F20, DNA
           sequence
          Length = 398

 Score = 40.5 bits (82), Expect = 0.011
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +1 / -3

                                    
Query: 187 FYKPXXYELXXXQXLNMEMXIIMXR 261
           FYKP  YEL   Q LNMEM I+M R
Sbjct: 393 FYKPCNYELFVKQSLNMEMAIVMAR 319

 Score = 32.2 bits (64), Expect = 3.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2 / +1

                                    
Query: 261 PXHNNXHFHV*XLLXXXFVXXXLVK 187
           P HNN H H+  LL   FV   LVK
Sbjct: 319 PCHNNSHLHIEGLLYKKFVIAWLVK 393
>gb|AW695452.2|AW695452 NF094H09ST1F1079 Developing stem Medicago truncatula cDNA clone
          NF094H09ST 5', mRNA sequence
          Length = 102

 Score = 26.7 bits (52), Expect(2) = 0.032
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +3 / +2

                       
Query: 3  ICITGSTSAGLHQ 41
          ICIT STSAGL Q
Sbjct: 32 ICITTSTSAGLEQ 70

 Score = 25.8 bits (50), Expect(2) = 0.032
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3 / +3

                    
Query: 45  LPWLYYHNV 71
           LPW+YYH V
Sbjct: 75  LPWIYYHKV 101
>gb|CA918739.1|CA918739 EST636457 MTUS Medicago truncatula cDNA clone MTUS-2F1, mRNA
           sequence
          Length = 701

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3 / -3

                                               
Query: 39  QILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLES 146
           Q LPW+ YH + G  H F  VE  +A+   T ++++
Sbjct: 264 QKLPWIQYHELQGAGHLFPNVEEVSAEILKTQLMDT 157
>gb|CX537743.1|CX537743 s13dNF25A05GS033_458722 Germinating Seed Medicago truncatula cDNA,
           mRNA sequence
          Length = 386

 Score = 34.5 bits (69), Expect = 0.67
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3 / +3

                                               
Query: 39  QILPWLYYHNVIGVSHFFLLVEGEAAKPAXTSVLES 146
           Q LPW+ YH + G  H F  VE  +A+   T ++++
Sbjct: 93  QKLPWIQYHELQGAGHLFPNVEEVSAEILKTQLMDT 200
>emb|CR301320.1| mte1-2I9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
           genomic survey sequence
          Length = 293

 Score = 24.4 bits (47), Expect(2) = 6.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3 / -3

                        
Query: 36  HQILPWLYYHNVI 74
           H+I PWL YH ++
Sbjct: 288 HRIHPWLKYHALV 250

 Score = 22.1 bits (42), Expect(2) = 6.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1 / -1

                                        
Query: 61  ITMSLVFHISFY*LKERLQSQLXPLFLNL 147
           I  ++++HISF   K+       P  LNL
Sbjct: 116 ILKTIMYHISFKSFKKFTTQSHSPSILNL 30
>gb|CG937573.1|CG937573 MBEIQ52TF mth2 Medicago truncatula genomic clone 64I7, DNA sequence
          Length = 918

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / +2

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 809 QNLPWIHYHELPGSGHLFPNADG 877
>emb|CR334354.1| mte1-64P17RM2 BAC end, cultivar Jemalong A17 of Medicago
           truncatula, genomic survey sequence
          Length = 502

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / -3

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 176 QNLPWVHYHELSGSGHLFPHADG 108
>emb|CR334629.1| mte1-64P16RM2 BAC end, cultivar Jemalong A17 of Medicago
           truncatula, genomic survey sequence
          Length = 627

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / -2

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 176 QNLPWVHYHELSGSGHLFPHADG 108
>gb|AW329250.2|AW329250 N200468e rootphos(-) Medicago truncatula cDNA clone MHRP-17H12,
           mRNA sequence
          Length = 653

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / +1

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 451 QNLPWVHYHELSGSGHLFPHADG 519
>gb|AL384018.1|AL384018 MtBC18D05F1 MtBC Medicago truncatula cDNA clone MtBC18D05 T3, mRNA
           sequence
          Length = 397

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / +1

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 301 QNLPWIHYHELPGSGHLFPNADG 369
>gb|AW686828.2|AW686828 NF043G10NR1F1000 Nodulated root Medicago truncatula cDNA clone
           NF043G10NR 5', mRNA sequence
          Length = 530

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / +1

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 145 QNLPWIHYHELPGSGHLFPNADG 213
>gb|CA921132.1|CA921132 EST638850 MTUS Medicago truncatula cDNA clone MTUS-36D3, mRNA
           sequence
          Length = 654

 Score = 30.9 bits (61), Expect = 8.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3 / -2

                                  
Query: 39  QILPWLYYHNVIGVSHFFLLVEG 107
           Q LPW++YH + G  H F   +G
Sbjct: 275 QNLPWVHYHELSGSGHLFPHADG 207
  Database: Mt_nucl_with_EST.fasta
    Posted date:  May 2, 2006  2:46 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 233,986,628
Number of Sequences: 392609
Number of extensions: 2209937
Number of successful extensions: 62004
Number of sequences better than 10.0: 25
length of database: 147,244,331
effective HSP length: 51
effective length of database: 127,221,272
effective search space used: 8269382680
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)