TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF12e06.yg.2.1
(561 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula ... 155 4e-066
gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone m... 154 5e-063
gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula ... 90 3e-038
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 89 4e-036
gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Med... 82 1e-033
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 90 3e-033
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 79 3e-033
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 86 3e-032
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 83 2e-029
gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Med... 67 6e-029
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 80 6e-029
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 89 8e-029
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 89 1e-028
gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-... 66 2e-028
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 77 7e-028
gb|AC148653.1| Medicago truncatula chromosome unknown clone... 71 9e-028
gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula c... 82 1e-027
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 71 2e-027
gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cD... 57 3e-027
gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula g... 47 4e-024
emb|CR298613.1| mte1-16A24RM1 BAC end, cultivar Jemalong A1... 112 5e-024
gb|CG963006.1|CG963006 MBEMN73TF mth2 Medicago truncatula g... 111 1e-023
gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula c... 82 1e-023
gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell cultu... 91 5e-023
gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower M... 73 8e-023
gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula c... 103 3e-021
>gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula cDNA clone pMHRP-53G17, mRNA
sequence
Length = 812
Score = 155 bits (334), Expect(2) = 4e-066
Identities = 59/104 (56%), Positives = 80/104 (76%)
Frame = +3 / +1
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
ISIF SH+LLPD+ L +VVVLDDD+++Q+DLS LWNLDMG KV GAVQFC VRLGQL
Sbjct: 154 ISIFSHSHYLLPDIFSKLKKVVVLDDDVVIQRDLSSLWNLDMGEKVNGAVQFCSVRLGQL 333
Query: 183 KPYIADHNVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKL 314
K Y+ + +SC W+SGLN+I+L +WR+ G+T + + +++L
Sbjct: 334 KGYLGEKGFSHNSCAWMSGLNIIDLVRWREFGLTQTYKRLIKEL 465
Score = 116 bits (249), Expect(2) = 4e-066
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3 / +1
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYK 527
A PA LLAF++ +YPL +SWV SGLGHDY I I+ A LHYNG MKPWLDLGI +YK
Sbjct: 496 AWPASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPNYK 675
Query: 528 NYWRKYL 548
+YW+KYL
Sbjct: 676 SYWKKYL 696
Score = 90.9 bits (192), Expect(2) = 2e-032
Identities = 47/94 (50%), Positives = 56/94 (59%)
Frame = -3 / -1
Query: 283 VMPVSLHLSNSMTFRPDNHTHESSSTLWSAI*GFSCPNLTPQNWTAPITLPPISRFHRGD 104
V P SLHL+ S+ F PD E +S * F+ P+LT QN TAP+T P+SRF R D
Sbjct: 434 VRPNSLHLTRSIMFNPDIQAQELWLKPFSPK*PFN*PSLTEQNCTAPLTFSPMSRFQRDD 255
Query: 103 KSFWTIKSSSRTTTLFKLGRRSGKRKCERPKIDM 2
KS SSSRTTT F L SG + CE KI+M
Sbjct: 254 KSR*ITTSSSRTTTFFNLLNISGSK*CE*EKIEM 153
Score = 68.9 bits (144), Expect(2) = 2e-032
Identities = 36/69 (52%), Positives = 41/69 (59%)
Frame = -3 / -1
Query: 547 RYFLQ*FL*SSIPKSSQGFITPL*CRVAAFSISTWLIP*SCPRPDSTHESSKGYTRS*KA 368
RYF Q* L* IP+SSQGFI PL*C A + I *S P PD TH+S GY A
Sbjct: 695 RYFFQ*LL*FGIPRSSQGFIFPL*CSTGADLMELESIL*S*PNPDRTHDSLSGYILFSNA 516
Query: 367 SRPAGSACS 341
S+ AG A +
Sbjct: 515 SKLAGHAAA 489
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
Length = 127058
Score = 154 bits (331), Expect(2) = 5e-063
Identities = 58/104 (55%), Positives = 80/104 (76%)
Frame = +3 / -2
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
ISIF SH+LLPD+ L +VVVLDDD+++Q+DLS LWNLDMG KV GAVQFC VRLGQL
Sbjct: 34765 ISIFSHSHYLLPDIFSKLKKVVVLDDDVVIQRDLSSLWNLDMGEKVNGAVQFCSVRLGQL 34586
Query: 183 KPYIADHNVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKL 314
K Y+ + +SC W+SGLN+I+L +WR+ G+T + + ++++
Sbjct: 34585 KGYLGEKGFSHNSCAWMSGLNIIDLVRWREFGLTQTYKRLIKEV 34454
Score = 116 bits (249), Expect(2) = 5e-063
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +3 / -3
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYK 527
A PA LLAF++ +YPL +SWV SGLGHDY I I+ A LHYNG MKPWLDLGI +YK
Sbjct: 33135 AWPASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPNYK 32956
Query: 528 NYWRKYL 548
+YW+KYL
Sbjct: 32955 SYWKKYL 32935
Score = 90.9 bits (192), Expect(2) = 2e-030
Identities = 47/94 (50%), Positives = 56/94 (59%)
Frame = -3 / +3
Query: 283 VMPVSLHLSNSMTFRPDNHTHESSSTLWSAI*GFSCPNLTPQNWTAPITLPPISRFHRGD 104
V P SLHL+ S+ F PD E +S * F+ P+LT QN TAP+T P+SRF R D
Sbjct: 34485 VRPNSLHLTRSIMFNPDIQAQELWLKPFSPK*PFN*PSLTEQNCTAPLTFSPMSRFQRDD 34664
Query: 103 KSFWTIKSSSRTTTLFKLGRRSGKRKCERPKIDM 2
KS SSSRTTT F L SG + CE KI+M
Sbjct: 34665 KSR*ITTSSSRTTTFFNLLNISGSK*CE*EKIEM 34766
Score = 71.6 bits (150), Expect(2) = 2e-030
Identities = 39/82 (47%), Positives = 45/82 (54%)
Frame = -3 / +2
Query: 547 RYFLQ*FL*SSIPKSSQGFITPL*CRVAAFSISTWLIP*SCPRPDSTHESSKGYTRS*KA 368
RYF Q* L* IP+SSQGFI PL*C A + I *S P PD TH+S GY A
Sbjct: 32936 RYFFQ*LL*FGIPRSSQGFIFPL*CSTGADLMELESIL*S*PNPDRTHDSLSGYILFSNA 33115
Query: 367 SRPAGSACSR*DFRLSFRNFWT 302
S+ AG A + D + WT
Sbjct: 33116 SKLAGHAAAVVDPFCTLNYIWT 33181
>gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula cDNA clone pGESD4L15 5' end,
mRNA sequence
Length = 731
Score = 89.5 bits (189), Expect(3) = 3e-038
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3 / +2
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F L +PL SW GLG+ I +IE AA +HYNG MKPWL++ +
Sbjct: 350 KLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMT 529
Query: 519 DYKNYWRKYL 548
Y+ YW KY+
Sbjct: 530 KYRPYWTKYV 559
Score = 74.8 bits (157), Expect(3) = 3e-038
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +3 / +2
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+S+ F LP + P L++++ LDDD++VQKDL+ LWN+D+ GKV GAV+ CG +
Sbjct: 2 LSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRF 181
Query: 183 KPYI 194
Y+
Sbjct: 182 DKYL 193
Score = 33.6 bits (67), Expect(3) = 3e-038
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3 / +2
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
N D ++C W G+N+ +L W+ IT ++
Sbjct: 221 NFDPNACGWAYGMNMFDLKVWKKKDITGIY 310
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 88.6 bits (187), Expect(3) = 4e-036
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +3 / -3
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F +PL SW GLG++ ++ DIE+AA +HYNG +KPWL++ I
Sbjct: 430 KLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKPWLEISIP 251
Query: 519 DYKNYWRKYL 548
+K YW KY+
Sbjct: 250 KFKGYWTKYV 221
Score = 68.0 bits (142), Expect(3) = 4e-036
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +3 / -3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+SI F LP++ P L +V+ LDDD++VQKDL+ LW++ + G + GAV+ C + +
Sbjct: 778 LSILNHFRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNINGAVETCTKKFHRF 599
Query: 183 KPYI 194
Y+
Sbjct: 598 DSYL 587
Score = 34.1 bits (68), Expect(3) = 4e-036
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3 / -3
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
N D +C W G+NV +L +W+ IT ++
Sbjct: 559 NFDPRACGWAYGMNVFDLVEWKKQNITEVY 470
>gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF092D05LF 5', mRNA sequence
Length = 652
Score = 82.2 bits (173), Expect(3) = 1e-033
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3 / +1
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYK 527
+LP G L F + + L+ W GLG+D GI IE+AA +HY+G+ KPW+D+G+ YK
Sbjct: 349 SLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYK 528
Query: 528 NYWRKYL 548
+YW K++
Sbjct: 529 SYWSKFM 549
Score = 62.9 bits (131), Expect(3) = 1e-033
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +3 / +1
Query: 27 FLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
F LP++ P+LN++++ D D++VQ+DLS LWN++M KVI V C
Sbjct: 7 FYLPNIFPTLNKILLFDHDVVVQQDLSTLWNINMNRKVIAGVGTC 141
Score = 36.8 bits (74), Expect(3) = 1e-033
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3 / +1
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQK 311
D ++C W G+N+ +L +WR +T ++ + +Q+
Sbjct: 217 DVNACTWAFGMNLFDLQQWRQHNLTGVYHKYLQR 318
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 89.5 bits (189), Expect(3) = 3e-033
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3 / -3
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F L +PL SW GLG+ I +IE AA +HYNG MKPWL++ +
Sbjct: 86793 KLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMT 86614
Query: 519 DYKNYWRKYL 548
Y+ YW KY+
Sbjct: 86613 KYRPYWTKYV 86584
Score = 74.8 bits (157), Expect(3) = 3e-033
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +3 / -3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+S+ F LP + P L++++ LDDD++VQKDL+ LWN+D+ GKV GAV+ CG +
Sbjct: 87456 LSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRF 87277
Query: 183 KPYI 194
Y+
Sbjct: 87276 DKYL 87265
Score = 33.6 bits (67), Expect(3) = 3e-033
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3 / -3
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
N D ++C W G+N+ +L W+ IT ++
Sbjct: 87237 NFDPNACGWAYGMNMFDLKVWKKKDITGIY 87148
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 79.4 bits (167), Expect(3) = 3e-033
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +3 / +2
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ + PL+ SW GLG++ IS +I AA +H+NG MKPWLD+ +
Sbjct: 350 KLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKPWLDIAMT 529
Query: 519 DYKNYWRKYL 548
+K W KY+
Sbjct: 530 QFKPLWSKYV 559
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +3 / +2
Query: 12 FGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
F F LP++ P L++V+ LDDD++VQKDL+ LW +DM GKV GAV+ C
Sbjct: 11 FDYLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETC 160
Score = 29.5 bits (58), Expect(3) = 3e-033
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 219 SCVWLSGLNVIELDKWR 269
+C W G+N +LD WR
Sbjct: 236 ACAWAYGMNFFDLDAWR 286
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 86.3 bits (182), Expect(3) = 3e-032
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +3 / -2
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F +PL +W GLG++ ++ DI++AA +HYNG MKPWL++ I
Sbjct: 52279 KLGTLPPGLITFWKRTFPLNKAWHVLGLGYNPNVNQKDIDRAAVMHYNGNMKPWLEISIP 52100
Query: 519 DYKNYWRKYL 548
++ YW KY+
Sbjct: 52099 KFRGYWTKYV 52070
Score = 75.8 bits (159), Expect(3) = 3e-032
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +3 / -3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+SI F LP++ P LN+V+ LDDD++VQKDL+ LW++D+ G V GAV+ CG +
Sbjct: 52959 LSILNHLRFYLPEVFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRF 52780
Query: 183 KPYI 194
Y+
Sbjct: 52779 DRYL 52768
Score = 33.1 bits (66), Expect(3) = 3e-032
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3 / -3
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
N D +C W G+NV +L +W+ IT ++
Sbjct: 52740 NFDPHACGWAYGMNVFDLVQWKRQKITEVY 52651
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 82.6 bits (174), Expect(3) = 2e-029
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = +3 / -2
Query: 351 LPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKN 530
LP GL+ F L+ SW GLG++ IS +I AA +HYNG MKPWLD+ + YKN
Sbjct: 46573 LPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIALNQYKN 46394
Query: 531 YWRKYL 548
W KY+
Sbjct: 46393 LWTKYV 46376
Score = 70.7 bits (148), Expect(3) = 2e-029
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +3 / -1
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
+S+ F LP++ P L +++LDDD++VQKDL+ LW +D+ GKV GAV+ C
Sbjct: 47348 LSMLDYLQFYLPEMYPKLRNILLLDDDVVVQKDLTGLWKIDLDGKVNGAVEIC 47190
Score = 31.3 bits (62), Expect(3) = 2e-029
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3 / -1
Query: 219 SCVWLSGLNVIELDKWR 269
+C W G+N+ +LD WR
Sbjct: 47114 ACAWTYGMNIFDLDAWR 47064
>gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Medicago truncatula cDNA clone
NF092H11LF 5', mRNA sequence
Length = 632
Score = 66.6 bits (139), Expect(3) = 6e-029
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3 / +3
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGI 515
+LP G L F + + L+ W GLG+D GI IE+AA +HY+G+ KPW+D+G+
Sbjct: 456 SLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIHYDGIRKPWMDIGL 623
Score = 62.9 bits (131), Expect(3) = 6e-029
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 27 FLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
F LP++ P+LN++++ D D++VQ+DLS LWN++M KVI V C
Sbjct: 114 FYLPNIFPTLNKILLFDHDVVVQQDLSTLWNINMNRKVIAGVGTC 248
Score = 36.8 bits (74), Expect(3) = 6e-029
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3 / +3
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQK 311
D ++C W G+N+ +L +WR +T ++ + +Q+
Sbjct: 324 DVNACTWAFGMNLFDLQQWRQHNLTGVYHKYLQR 425
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 79.9 bits (168), Expect(3) = 6e-029
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +3 / +3
Query: 312 LRKDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVM 491
L+ ++ +L LP GL+ + PL+ SW GLG++ IS +I AA +H+NG M
Sbjct: 51081 LQNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNM 51260
Query: 492 KPWLDLGILDYKNYWRKYL 548
KPWLD+ + +K W KY+
Sbjct: 51261 KPWLDIAMTQFKPLWSKYV 51317
Score = 73.5 bits (154), Expect(3) = 6e-029
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +3 / +3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
+SI F LP++ P L++V+ LDDD++VQKDL+ LW +DM GKV GAV+ C
Sbjct: 50109 LSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETC 50267
Score = 29.5 bits (58), Expect(3) = 6e-029
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 219 SCVWLSGLNVIELDKWR 269
+C W G+N +LD WR
Sbjct: 50343 ACAWAYGMNFFDLDAWR 50393
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 88.6 bits (187), Expect(2) = 8e-029
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +3 / +2
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F +PL SW GLG++ ++ DIE+AA +HYNG +KPWL++ I
Sbjct: 45413 KLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKPWLEISIP 45592
Query: 519 DYKNYWRKYL 548
+K YW KY+
Sbjct: 45593 KFKGYWTKYV 45622
Score = 68.0 bits (142), Expect(2) = 8e-029
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +3 / +1
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+SI F LP++ P L +V+ LDDD++VQKDL+ LW++ + G + GAV+ C + +
Sbjct: 44920 LSILNHLRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNINGAVETCTKKFHRF 45099
Query: 183 KPYI 194
Y+
Sbjct: 45100 DSYL 45111
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 88.6 bits (187), Expect(2) = 1e-028
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +3 / +3
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F +PL SW GLG++ ++ DIE+AA +HYNG +KPWL++ I
Sbjct: 1215 KLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKPWLEISIP 1394
Query: 519 DYKNYWRKYL 548
+K YW KY+
Sbjct: 1395 KFKGYWTKYV 1424
Score = 68.0 bits (142), Expect(2) = 1e-028
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +3 / +2
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+SI F LP++ P L +V+ LDDD++VQKDL+ LW++ + G + GAV+ C + +
Sbjct: 722 LSILNHLRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNINGAVETCTKKFHRF 901
Query: 183 KPYI 194
Y+
Sbjct: 902 DSYL 913
>gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-45a9, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 125396
Score = 66.1 bits (138), Expect(4) = 2e-028
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3 / -1
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
+S+ F +P++ P L ++V LDDD++VQKDLS L+++D+ G V GAV+ C
Sbjct: 46988 LSMLNHLRFYIPEIFPELKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETC 46830
Score = 66.1 bits (138), Expect(4) = 2e-028
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3 / -3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
+S+ F +P++ P L ++V LDDD++VQKDLS L+++D+ G V GAV+ C
Sbjct: 106002 LSMLNHLRFYIPEIFPELKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETC 105844
Score = 48.7 bits (100), Expect(4) = 2e-028
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3 / -1
Query: 453 IEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
IEK LH+NG KPWL +GI YK W K++
Sbjct: 46529 IEKGVVLHFNGNSKPWLKIGIEKYKPLWEKHI 46434
Score = 48.7 bits (100), Expect(4) = 2e-028
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3 / -3
Query: 453 IEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
IEK LH+NG KPWL +GI YK W K++
Sbjct: 105543 IEKGVVLHFNGNSKPWLKIGIEKYKPLWEKHI 105448
Score = 35.9 bits (72), Expect(4) = 2e-028
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLH 293
D D+C W G+NV +L +WR +T ++
Sbjct: 46763 DLDACGWAFGMNVFDLVEWRKNNVTGIY 46680
Score = 35.9 bits (72), Expect(4) = 2e-028
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLH 293
D D+C W G+NV +L +WR +T ++
Sbjct: 105777 DLDACGWAFGMNVFDLVEWRKNNVTGIY 105694
Score = 30.4 bits (60), Expect(4) = 2e-028
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / -1
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGH 428
+L LP GLL F L+ L+ SW G G+
Sbjct: 46640 KLGTLPPGLLTFYGLI*KLDRSWHVLGFGY 46551
Score = 30.4 bits (60), Expect(4) = 2e-028
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / -3
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGH 428
+L LP GLL F L+ L+ SW G G+
Sbjct: 105654 KLGTLPPGLLTFYGLI*KLDRSWHVLGFGY 105565
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 76.7 bits (161), Expect(3) = 7e-028
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3 / -1
Query: 318 KDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKP 497
+ ++ +L LP L+AF+ V+P++ SW GLG+ S ++ AA +HYNG KP
Sbjct: 40772 RSNMTMWKLGTLPPALIAFRGHVHPIDPSWHMLGLGYQNKTSVEKVKMAAVIHYNGQSKP 40593
Query: 498 WLDLGILDYKNYWRKYL 548
WL++G K +W KY+
Sbjct: 40592 WLEIGFEHLKPFWTKYV 40542
Score = 68.4 bits (143), Expect(3) = 7e-028
Identities = 25/40 (62%), Positives = 34/40 (85%)
Frame = +3 / -1
Query: 42 LLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
L P+L++VV LDDD++VQ+DLSPLW +D+ GKV GAV+ C
Sbjct: 41525 LYPNLDKVVFLDDDVVVQRDLSPLWEIDLNGKVNGAVETC 41406
Score = 34.5 bits (69), Expect(3) = 7e-028
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / -1
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGI 281
++D D C W G+NV +L WR I
Sbjct: 41330 HLDPDECAWAYGMNVFDLRAWRAANI 41253
>gb|AC148653.1| Medicago truncatula chromosome unknown clone mte1-26k20, *** SEQUENCING
IN PROGRESS ***, 11 unordered pieces
Length = 147635
Score = 70.7 bits (148), Expect(3) = 9e-028
Identities = 29/77 (37%), Positives = 40/77 (51%)
Frame = +3 / -2
Query: 318 KDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKP 497
K L L LP GL+AF V+ ++ W GLG+ + VD + A +H+NG KP
Sbjct: 24220 KSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGWAKP 24041
Query: 498 WLDLGILDYKNYWRKYL 548
WLD+ K W KY+
Sbjct: 24040 WLDIAFPQLKPLWTKYV 23990
Score = 68.9 bits (144), Expect(3) = 9e-028
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +3 / -1
Query: 42 LLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
L PSL++VV LD+D++VQ DLSPLW++DM GKV GAV+ C
Sbjct: 24731 LFPSLDKVVFLDNDIVVQTDLSPLWDIDMNGKVNGAVETC 24612
Score = 40.0 bits (81), Expect(3) = 9e-028
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3 / -1
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKL 314
N D + C W G+N+++L+ WR T I+ + V+++
Sbjct: 24536 NFDPNECAWAYGMNILDLEAWRKTNISYTYHYWVEQV 24426
>gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula cDNA clone MTUS-55E11, mRNA
sequence
Length = 775
Score = 82.2 bits (173), Expect(3) = 1e-027
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3 / -1
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYK 527
+LP G L F + + L+ W GLG+D GI IE+AA +HY+G+ KPW+D+G+ YK
Sbjct: 481 SLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYK 302
Query: 528 NYWRKYL 548
+YW K++
Sbjct: 301 SYWSKFM 281
Score = 42.8 bits (87), Expect(3) = 1e-027
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +3 / -1
Query: 75 DDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
D D++VQ+DLS LWN++M KVI V C
Sbjct: 775 DHDVVVQQDLSTLWNINMNRKVIAGVGTC 689
Score = 36.8 bits (74), Expect(3) = 1e-027
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3 / -1
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQK 311
D ++C W G+N+ +L +WR +T ++ + +Q+
Sbjct: 613 DVNACTWAFGMNLFDLQQWRQHNLTGVYHKYLQR 512
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 70.7 bits (148), Expect(3) = 2e-027
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +3 / +2
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
++I F LP++ P L++V+ LDDD++VQKDL+ LW +DM GKV GAV C
Sbjct: 152 LAILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVXTC 310
Score = 61.1 bits (127), Expect(3) = 2e-027
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +3 / +2
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPW 500
+L LP GL+ + PL+ SW GLG++ IS +I AA +H+NG MKPW
Sbjct: 500 KLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKPW 661
Score = 29.5 bits (58), Expect(3) = 2e-027
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 219 SCVWLSGLNVIELDKWR 269
+C W G+N +LD WR
Sbjct: 386 ACAWAYGMNFFDLDAWR 436
>gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cDNA clone pGVN-63F8 5' end, mRNA
sequence
Length = 593
Score = 57.4 bits (119), Expect(4) = 3e-027
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +3 / +1
Query: 48 PSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFC 161
P+L ++V LDDD++VQKDLS L+++D+ G V GAV+ C
Sbjct: 1 PALKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETC 114
Score = 49.2 bits (101), Expect(4) = 3e-027
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3 / +1
Query: 453 IEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
IE+ A LH+NG KPWL +GI YK W K++
Sbjct: 415 IERGAVLHFNGNSKPWLKIGIEKYKPLWEKHI 510
Score = 36.8 bits (74), Expect(4) = 3e-027
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3 / +1
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLH 293
D D+C W G+NV +L +WR +T ++
Sbjct: 181 DPDACGWAFGMNVFDLVEWRKKNVTGIY 264
Score = 34.1 bits (68), Expect(4) = 3e-027
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGH 428
+L LP GLL F L PL+ SW G G+
Sbjct: 304 KLGTLPPGLLTFYGLTEPLDPSWHVLGFGY 393
>gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula genomic clone 44G15, DNA
sequence
Length = 776
Score = 47.3 bits (97), Expect(4) = 4e-024
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3 / +1
Query: 309 KLRKDSLKSQRLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLH 476
+L+ + +L LP GL+ F +PL SW GLG++ ++ DIE AA +H
Sbjct: 532 RLQNHDRQLWKLGTLPPGLMTFWKHTFPLNRSWHVLGLGYNPDVNQKDIESAAVIH 699
Score = 46.4 bits (95), Expect(4) = 4e-024
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3 / +2
Query: 75 DDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQLKPYI 194
DDD++VQKDL+ LW++++ G + GAV+ C + Y+
Sbjct: 158 DDDVVVQKDLTDLWSINLEGNINGAVETCAGSFHRFDGYL 277
Score = 42.3 bits (86), Expect(4) = 4e-024
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3 / +1
Query: 477 YNGVMKPWLDLGILDYKNYWRKY 545
YNG MKPWL++ I ++ YW KY
Sbjct: 706 YNGNMKPWLEISIQKFQGYWTKY 774
Score = 32.7 bits (65), Expect(4) = 4e-024
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 27 FLLPDLLPSLNRVVVLDDDLIV 92
F LP++ P L +VV LDDD +V
Sbjct: 107 FYLPEIFPKLKKVVFLDDDDVV 172
>emb|CR298613.1| mte1-16A24RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 494
Score = 112 bits (239), Expect = 5e-024
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +3 / +1
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
ISIF SH+LLPD+ L +VVVLDDD+++Q+DLS LWNLDMG KV GAVQFC VRLGQL
Sbjct: 301 ISIFSHSHYLLPDIFSKLKKVVVLDDDVVIQRDLSSLWNLDMGEKVNGAVQFCSVRLGQL 480
Query: 183 KPYI 194
K Y+
Sbjct: 481 KGYL 492
>gb|CG963006.1|CG963006 MBEMN73TF mth2 Medicago truncatula genomic clone 3M2, DNA sequence
Length = 874
Score = 111 bits (236), Expect = 1e-023
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = +3 / +1
Query: 363 LLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKNYWRK 542
LLAF++ +YPL +SWV SGLGHDY I I+ A LHYNG MKPWLDLGI +YK+YW+K
Sbjct: 4 LLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPNYKSYWKK 183
Query: 543 YL 548
YL
Sbjct: 184 YL 189
>gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula cDNA clone MTUS-47D7, mRNA
sequence
Length = 808
Score = 82.2 bits (173), Expect(3) = 1e-023
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3 / -2
Query: 348 ALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYK 527
+LP G L F + + L+ W GLG+D GI IE+AA +HY+G+ KPW+D+G+ YK
Sbjct: 537 SLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYK 358
Query: 528 NYWRKYL 548
+YW K++
Sbjct: 357 SYWSKFM 337
Score = 36.8 bits (74), Expect(3) = 1e-023
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3 / -2
Query: 210 DDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQK 311
D ++C W G+N+ +L +WR +T ++ + +Q+
Sbjct: 669 DVNACTWAFGMNLFDLQQWRQHNLTGVYHKYLQR 568
Score = 29.0 bits (57), Expect(3) = 1e-023
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 99 DLSPLWNLDMGGKVIGAV 152
DLS LWN++M KVI V
Sbjct: 807 DLSTLWNINMNRKVIAGV 754
>gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF088D03EC 5', mRNA sequence
Length = 645
Score = 91.3 bits (193), Expect(2) = 5e-023
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +3 / +1
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGIL 518
+L LP GL+ F +L YPL+ W GLG+D ++ +I+ AA HYNG KPWL+L +
Sbjct: 232 KLGTLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIDNAAVXHYNGNFKPWLNLAVS 411
Query: 519 DYKNYWRKYL 548
YK+YW KY+
Sbjct: 412 KYKSYWSKYV 441
Score = 37.3 bits (75), Expect(2) = 5e-023
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3 / +1
Query: 192 IADHNVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
+ +N D+C W G+NV +L +W+ IT ++
Sbjct: 91 LISNNFSPDACGWAFGMNVFDLKEWKKRNITGIY 192
>gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF012D10FL 5', mRNA sequence
Length = 685
Score = 73.0 bits (153), Expect(3) = 8e-023
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +3 / +3
Query: 3 ISIFGLSHFLLPDLLPSLNRVVVLDDDLIVQKDLSPLWNLDMGGKVIGAVQFCGVRLGQL 182
+S+ F LP++ P L++++ LDDD++VQKDL+ LW +D+ GKV GAV+ CG +
Sbjct: 228 LSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWEVDLQGKVNGAVETCGESFHRF 407
Query: 183 KPYI 194
Y+
Sbjct: 408 DKYL 419
Score = 36.3 bits (73), Expect(3) = 8e-023
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3 / +3
Query: 204 NVDDDSCVWLSGLNVIELDKWRDTGITSLH 293
N D ++C W G+N+ +L +W+ IT ++
Sbjct: 447 NFDPNACGWAYGMNIFDLKEWKKXDITGIY 536
Score = 35.9 bits (72), Expect(3) = 8e-023
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3 / +3
Query: 339 RLQALPAGLLAFQDLVYPLEDSWVESGLGH 428
+L LP GL+ F L +PL SW GLG+
Sbjct: 576 KLGTLPPGLMTFYGLTHPLNKSWHVLGLGY 665
>gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula cDNA clone MTUS-16F9, mRNA
sequence
Length = 756
Score = 103 bits (219), Expect = 3e-021
Identities = 39/119 (32%), Positives = 65/119 (54%)
Frame = +3 / -3
Query: 192 IADHNVDDDSCVWLSGLNVIELDKWRDTGITSLHDQSVQKLRKDSLKSQRLQALPAGLLA 371
+ N + + C W G+N+ +L+ WR T I++ + V + K L +L LP GL+A
Sbjct: 691 LISENFNPNECAWAYGMNIFDLEAWRRTNISNKYHHWVAQNIKSDLSLWQLGTLPPGLIA 512
Query: 372 FQDLVYPLEDSWVESGLGHDYGISHVDIEKAATLHYNGVMKPWLDLGILDYKNYWRKYL 548
F V+ ++ W GLG+ + D+E A +H+NG KPWLD+ + ++ W KY+
Sbjct: 511 FHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAKPWLDIAFPELRSLWTKYV 335
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 575,184,294
Number of Sequences: 392609
Number of extensions: 7774202
Number of successful extensions: 47755
Number of sequences better than 1.0e-020: 36
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 16815995182
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)