TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAD12g05.sg.3.2
(900 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI311459.1|BI311459 EST5313209 GESD Medicago truncatula ... 259 7e-072
gb|CA921878.1|CA921878 EST639596 MTUS Medicago truncatula c... 259 2e-071
gb|BQ164871.1|BQ164871 EST610740 KVKC Medicago truncatula c... 259 6e-068
gb|BG456111.1|BG456111 NF074C05PL1F1036 Phosphate starved l... 256 3e-067
gb|BF648139.1|BF648139 NF044F04EC1F1042 Elicited cell cultu... 242 8e-063
gb|BQ164872.1|BQ164872 EST610741 KVKC Medicago truncatula c... 219 4e-060
gb|AJ502652.1|AJ502652 AJ502652 MTAMP Medicago truncatula c... 201 1e-050
gb|BE942733.1|BE942733 EST422312 MGHG Medicago truncatula c... 130 3e-038
gb|BE204751.1|BE204751 EST397427 KV0 Medicago truncatula cD... 160 3e-038
gb|AI974554.1|AI974554 T113003e KV2 Medicago truncatula cDN... 110 4e-023
>gb|BI311459.1|BI311459 EST5313209 GESD Medicago truncatula cDNA clone pGESD10N18 5' end,
mRNA sequence
Length = 830
Score = 259 bits (559), Expect(2) = 7e-072
Identities = 107/184 (58%), Positives = 135/184 (73%)
Frame = +1 / +3
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 84 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 263
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 264 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 443
Query: 544 AVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
AV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI IP +I+IR W+K AA
Sbjct: 444 AVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWIVIPSIISIRCWRKISAA 623
Query: 724 FQAE 735
F+ +
Sbjct: 624 FRVQ 635
Score = 148 bits (318), Expect = 1e-034
Identities = 86/176 (48%), Positives = 100/176 (56%)
Frame = -2 / -2
Query: 725 NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQT 546
NAA +F Q M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +T
Sbjct: 625 NAALIFLQQRMEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNET 446
Query: 545 ANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXX 366
AN RM L DF AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT
Sbjct: 445 AN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KP 266
Query: 365 XXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAP 198
G KTK PS + V PVNAHQ++S S L + +A++ + P
Sbjct: 265 VLSLKNSGAKTK*PSRMRCVRPVNAHQNISSLSTFVFLRRPEKNHVSAKRMTKKEP 98
Score = 34.1 bits (68), Expect(2) = 7e-072
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 115 HPYAPAELDLPGFVPLKLS 171
HPY P +L LPG+VP LS
Sbjct: 20 HPYVPKDLHLPGYVPCFLS 76
>gb|CA921878.1|CA921878 EST639596 MTUS Medicago truncatula cDNA clone MTUS-45E8, mRNA
sequence
Length = 776
Score = 259 bits (559), Expect(2) = 2e-071
Identities = 107/184 (58%), Positives = 135/184 (73%)
Frame = +1 / -3
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 666 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 487
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 486 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 307
Query: 544 AVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
AV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI IP +I+IR W+K AA
Sbjct: 306 AVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWIVIPSIISIRCWRKISAA 127
Query: 724 FQAE 735
F+ +
Sbjct: 126 FRVQ 115
Score = 148 bits (318), Expect = 1e-034
Identities = 86/176 (48%), Positives = 100/176 (56%)
Frame = -2 / +2
Query: 725 NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQT 546
NAA +F Q M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +T
Sbjct: 125 NAALIFLQQRMEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNET 304
Query: 545 ANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXX 366
AN RM L DF AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT
Sbjct: 305 AN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KP 484
Query: 365 XXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAP 198
G KTK PS + V PVNAHQ++S S L + +A++ + P
Sbjct: 485 VLSLKNSGAKTK*PSRMRCVRPVNAHQNISSLSTFVFLRRPEKNHVSAKRMTKKEP 652
Score = 32.7 bits (65), Expect(2) = 2e-071
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1 / -1
Query: 115 HPYAPAELDLPGFVPL 162
HPY P +L LPG+VP+
Sbjct: 731 HPYVPKDLHLPGYVPV 684
>gb|BQ164871.1|BQ164871 EST610740 KVKC Medicago truncatula cDNA clone pKVKC-3B10, mRNA
sequence
Length = 835
Score = 259 bits (559), Expect = 6e-068
Identities = 107/184 (58%), Positives = 135/184 (73%)
Frame = +1 / +1
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 103 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 282
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 283 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 462
Query: 544 AVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
AV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI IP +I+IR W+K AA
Sbjct: 463 AVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWIVIPSIISIRCWRKISAA 642
Query: 724 FQAE 735
F+ +
Sbjct: 643 FRVQ 654
Score = 148 bits (318), Expect = 1e-034
Identities = 86/176 (48%), Positives = 100/176 (56%)
Frame = -2 / -3
Query: 725 NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQT 546
NAA +F Q M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +T
Sbjct: 644 NAALIFLQQRMEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNET 465
Query: 545 ANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXX 366
AN RM L DF AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT
Sbjct: 464 AN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KP 285
Query: 365 XXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAP 198
G KTK PS + V PVNAHQ++S S L + +A++ + P
Sbjct: 284 VLSLKNSGAKTK*PSRMRCVRPVNAHQNISSLSTFVFLRRPEKNHVSAKRMTKKEP 117
>gb|BG456111.1|BG456111 NF074C05PL1F1036 Phosphate starved leaf Medicago truncatula cDNA
clone NF074C05PL 5', mRNA sequence
Length = 669
Score = 256 bits (554), Expect = 3e-067
Identities = 107/182 (58%), Positives = 133/182 (73%)
Frame = +1 / +3
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 120 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 299
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 300 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 479
Query: 544 AVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAIRSWKKTCAA 723
AV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI IP +I+IR W K AA
Sbjct: 480 AVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWIVIPSIISIRCWXKISAA 659
Query: 724 FQ 729
F+
Sbjct: 660 FR 665
Score = 148 bits (317), Expect = 2e-034
Identities = 86/176 (48%), Positives = 100/176 (56%)
Frame = -2 / -3
Query: 725 NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQT 546
NAA +F Q M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +T
Sbjct: 661 NAALIFXQQRMEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNET 482
Query: 545 ANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXX 366
AN RM L DF AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT
Sbjct: 481 AN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KP 302
Query: 365 XXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAP 198
G KTK PS + V PVNAHQ++S S L + +A++ + P
Sbjct: 301 VLSLKNSGAKTK*PSRMRCVRPVNAHQNISSLSTFVFLRRPEKNHVSAKRMTKKEP 134
>gb|BF648139.1|BF648139 NF044F04EC1F1042 Elicited cell culture Medicago truncatula cDNA
clone NF044F04EC 5', mRNA sequence
Length = 651
Score = 242 bits (522), Expect = 8e-063
Identities = 101/171 (59%), Positives = 126/171 (73%)
Frame = +1 / +2
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 137 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 316
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 317 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 496
Query: 544 AVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWIWIPMLIAI 696
AV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI IP +I+I
Sbjct: 497 AVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWIVIPSIISI 649
Score = 137 bits (294), Expect = 2e-031
Identities = 81/166 (48%), Positives = 94/166 (56%)
Frame = -2 / -1
Query: 695 MAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQTANWRMWLKDF 516
M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +TAN RM L DF
Sbjct: 648 MEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNETAN*RM*LYDF 469
Query: 515 LDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXXXXXXXXXGVK 336
AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT G K
Sbjct: 468 PVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KPVLSLKNSGAK 289
Query: 335 TKGPSIIMWVNPVNAHQHMSRRSVLDNLTHLPETSQTARKTKTEAP 198
TK PS + V PVNAHQ++S S L + +A++ + P
Sbjct: 288 TK*PSRMRCVRPVNAHQNISSLSTFVFLRRPEKNHVSAKRMTKKEP 151
>gb|BQ164872.1|BQ164872 EST610741 KVKC Medicago truncatula cDNA clone pKVKC-3B10, mRNA
sequence
Length = 683
Score = 219 bits (472), Expect(2) = 4e-060
Identities = 90/141 (63%), Positives = 109/141 (77%)
Frame = +1 / -1
Query: 313 IMIEGPFVFTPDFFKKENPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLL 492
+++EG FVF P+FFK + EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLL
Sbjct: 605 LILEGYFVFAPEFFKDNTGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLL 426
Query: 493 AVYAIASRKSFSHILQFAVCLGQLYGCLVYFITAYLDGFNFWVGPFYFWAYFIGANSFWI 672
AVYAIA+ KS+S+ILQFAV LGQLYG Y+ITA L+G NF FY++AY+IGAN WI
Sbjct: 425 AVYAIATGKSYSYILQFAVSLGQLYGTATYYITAILEGDNFSTNSFYYYAYYIGANFSWI 246
Query: 673 WIPMLIAIRSWKKTCAAFQAE 735
IP +I+IR W+K AAF+ +
Sbjct: 245 VIPSIISIRCWRKISAAFRVQ 183
Score = 128 bits (274), Expect = 1e-028
Identities = 74/135 (54%), Positives = 80/135 (59%)
Frame = -2 / +1
Query: 725 NAAQVFFQDLMAMSIGIQIQKLFAPMKYAQK*NGPTQKLKPSKYAVMK*TRHP*SWPRQT 546
NAA +F Q M M G+ IQ+ FAPM YA *N +KL PSK AV+ P S P +T
Sbjct: 193 NAALIFLQQRMEMIEGMTIQEKFAPM*YA***NEFVEKLSPSKIAVI*YVAVPYS*PNET 372
Query: 545 ANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAVSLATYLESPLLYSFQTXXXXXX 366
AN RM L DF AIA TA AGPS TAV PST T A SLA YLESPLLYSFQT
Sbjct: 373 AN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAASLAAYLESPLLYSFQTSAR*KP 552
Query: 365 XXXXXXXGVKTKGPS 321
G KTK PS
Sbjct: 553 VLSLKNSGAKTK*PS 597
Score = 34.5 bits (69), Expect(2) = 4e-060
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 253 RLSKTDRLLMCWWAFTG 303
R K DRLL+ WWAFTG
Sbjct: 667 RKQKVDRLLIFWWAFTG 617
>gb|AJ502652.1|AJ502652 AJ502652 MTAMP Medicago truncatula cDNA clone mtgmadc120023e11,
mRNA sequence
Length = 547
Score = 201 bits (434), Expect = 1e-050
Identities = 85/141 (60%), Positives = 105/141 (74%)
Frame = +1 / +3
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 120 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 299
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFSHILQF 543
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S+ILQF
Sbjct: 300 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYSYILQF 479
Query: 544 AVCLGQLYGCLVYFITAYLDG 606
AV LGQLYG Y+ITA L+G
Sbjct: 480 AVSLGQLYGTPTYYITAILEG 542
Score = 113 bits (241), Expect = 5e-024
Identities = 66/138 (47%), Positives = 76/138 (55%)
Frame = -2 / -1
Query: 611 LKPSKYAVMK*TRHP*SWPRQTANWRMWLKDFLDAIA*TASSDAGPSNTAVIPSTVTVAV 432
L PSK AV+ P S P +TAN RM L DF AIA TA AGPS TAV PST T A
Sbjct: 547 LSPSKIAVI*YVGVPYS*PNETAN*RM*LYDFPVAIAYTARRLAGPSKTAVSPSTATTAA 368
Query: 431 SLATYLESPLLYSFQTXXXXXXXXXXXXXGVKTKGPSIIMWVNPVNAHQHMSRRSVLDNL 252
SLA YLESPLLYSFQT G TK PS + V PVNAHQ++S S L
Sbjct: 367 SLAAYLESPLLYSFQTSAR*KPVLSLKNSGANTK*PSRMRCVRPVNAHQNISSLSTFVFL 188
Query: 251 THLPETSQTARKTKTEAP 198
+ +A++ + P
Sbjct: 187 RRPEKNHVSAKRMTKKEP 134
>gb|BE942733.1|BE942733 EST422312 MGHG Medicago truncatula cDNA clone pMGHG-9E22, mRNA
sequence
Length = 500
Score = 130 bits (278), Expect(3) = 3e-038
Identities = 53/100 (53%), Positives = 69/100 (69%)
Frame = +1 / +1
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ R ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 151 ILSGYGSFFVILFALTWFFSRRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 330
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPA 483
+ EVWKEYSK DSRY ARD A V VEG+TAVLE P+
Sbjct: 331 TGFYLAEVWKEYSKRDSRYAARDAAVVAVEGLTAVLERPS 450
Score = 36.3 bits (73), Expect(3) = 3e-038
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 475 GPASLLAVYAIASRKSFSH 531
GPASLLAVYAIA+ KS+S+
Sbjct: 443 GPASLLAVYAIATGKSYSY 499
Score = 32.2 bits (64), Expect(3) = 3e-038
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 115 HPYAPAELDLPGFVP 159
HPY P +L LPG+VP
Sbjct: 84 HPYVPKDLHLPGYVP 128
>gb|BE204751.1|BE204751 EST397427 KV0 Medicago truncatula cDNA clone pKV0-18G10, mRNA
sequence
Length = 583
Score = 160 bits (344), Expect = 3e-038
Identities = 67/115 (58%), Positives = 84/115 (73%)
Frame = +1 / +2
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 239 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 418
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATVTVEGITAVLEGPASLLAVYAIASRKSFS 528
+ EVWKEYSKGDSRY ARD A V VEG+TAVLEGPASLLAVYAIA+ KS+S
Sbjct: 419 TGFYLAEVWKEYSKGDSRYAARDAAVVAVEGLTAVLEGPASLLAVYAIATGKSYS 583
>gb|AI974554.1|AI974554 T113003e KV2 Medicago truncatula cDNA clone pKV2-1A7, mRNA sequence
Length = 380
Score = 110 bits (234), Expect = 4e-023
Identities = 44/87 (50%), Positives = 58/87 (66%)
Frame = +1 / +3
Query: 184 LVSYLGASVFVFLAVWLVSGRCVRLSKTDRLLMCWWAFTGLTHIMIEGPFVFTPDFFKKE 363
++S G+ + A+ ++ +K DRLL+ WWAFTGLTH+++EG FVF P+FFK
Sbjct: 117 ILSGYGSFFVILFALTWFFSGRLKKTKVDRLLIFWWAFTGLTHLILEGYFVFAPEFFKDN 296
Query: 364 NPNFFDEVWKEYSKGDSRYVARDTATV 444
+ EVWKEYSKGDSRY ARD A V
Sbjct: 297 TGFYLAEVWKEYSKGDSRYAARDAAVV 377
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 744,166,956
Number of Sequences: 392609
Number of extensions: 9376061
Number of successful extensions: 44953
Number of sequences better than 1.0e-020: 11
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 30658803984
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)