TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021175.2.1
(1225 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone m... 132 3e-064
gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORK... 132 4e-064
gb|AC124960.26| Medicago truncatula clone mth2-26j24, compl... 132 5e-064
gb|AC159125.9| Medicago truncatula clone mth2-189o22, WORKI... 132 6e-064
emb|CR511381.1| mth4-28I23FM3 BAC end, cultivar Jemalong A1... 134 2e-058
gb|CG929132.1|CG929132 MBEIX05TR mth2 Medicago truncatula g... 134 2e-058
gb|CG929270.1|CG929270 MBEBG04TF mth2 Medicago truncatula g... 134 1e-057
emb|CR481626.1| mth2-145I19RM1 BAC end, cultivar Jemalong A... 109 6e-054
emb|CR511380.1| mth4-28I23FM1 BAC end, cultivar Jemalong A1... 96 4e-048
gb|AJ846042.1|AJ846042 AJ846042 MtSC4 Medicago truncatula c... 95 4e-041
emb|CR331661.1| mte1-60L6FM1 BAC end, cultivar Jemalong A17... 105 5e-039
gb|AC144405.28| Medicago truncatula clone mth2-16m18, WORKI... 105 6e-037
gb|AC139344.17| Medicago truncatula clone mth2-34b22, compl... 105 8e-037
gb|CB891305.1|CB891305 EST648274 KV3 Medicago truncatula cD... 100 1e-033
emb|CR349725.1| mte1-84M2RM1 BAC end, cultivar Jemalong A17... 130 4e-029
gb|AW299027.1|AW299027 EST305701 KV2 Medicago truncatula cD... 100 4e-026
gb|CA921313.1|CA921313 EST639031 MTUS Medicago truncatula c... 78 3e-022
gb|CG942894.1|CG942894 MBEGW86TR mth2 Medicago truncatula g... 105 1e-021
emb|CR969622.1| mth4-23B4FM1 BAC end, cultivar Jemalong A17... 105 1e-021
gb|AL370334.1|AL370334 MtBA37B07R1 MtBA Medicago truncatula... 100 2e-021
gb|BE203251.1|BE203251 EST403273 KV1 Medicago truncatula cD... 100 7e-021
gb|AL366723.1|AL366723 MtBA09G06F1 MtBA Medicago truncatula... 98 1e-020
>gb|AC149207.3| Medicago truncatula chromosome 2 BAC clone mte1-60l24, complete sequence
Length = 107210
Score = 132 bits (283), Expect(4) = 3e-064
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 100981 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNKNMKRDFTWVQSI 101160
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ A++T W
Sbjct: 101161 VILFDNHQLFLGAKKTSTW 101217
Score = 106 bits (227), Expect(4) = 3e-064
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1 / +1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGGA +Y +S LFS DC
Sbjct: 101440 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDC 101619
Query: 982 AVARFGG 1002
+VARF G
Sbjct: 101620 SVARFIG 101640
Score = 86.3 bits (182), Expect(3) = 1e-028
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V A W +KR+ VKS M LPMK A MWR SET QK SFLPWK
Sbjct: 101216 HVDVFLAPRKSW*LSKRITMDCTHVKSLFMFLFLLPMK*AFMWRLLSETRQKLLSFLPWK 101037
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 101036 *KVIPSPPMKRGSWQTAPG 100980
Score = 65.2 bits (136), Expect(3) = 1e-028
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -3 / -1
Query: 1001 PPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPR 822
P KRAT QS E + + S APP+ G+L LT* G VWP+TP TS ++ NLKP+
Sbjct: 101639 PMKRATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPK 101460
Query: 821 SRCARVS 801
SR A+ S
Sbjct: 101459 SR*AKQS 101439
Score = 57.0 bits (118), Expect(4) = 3e-064
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / +1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 101350 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 101442
Score = 35.9 bits (72), Expect(4) = 3e-064
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1 / +2
Query: 241 CNARCPHKCLIQCPSCKTFCLCDFY 315
C CP+ C ++C SCK C Y
Sbjct: 100784 CPKSCPYDCTVECASCKPICCKSIY 100858
Score = 34.1 bits (68), Expect(3) = 1e-028
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 101441 SSLVIP*L*ILESSSVIGTTLAVILKFP 101358
>gb|AC159124.12| Medicago truncatula clone mth2-172h20, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 117155
Score = 132 bits (283), Expect(4) = 4e-064
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1 / -1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 35522 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNKNMKRDFTWVQSI 35343
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ A++T W
Sbjct: 35342 VILFDNHQLFLGAKKTSTW 35286
Score = 106 bits (227), Expect(4) = 4e-064
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1 / -1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGGA +Y +S LFS DC
Sbjct: 35063 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDC 34884
Query: 982 AVARFGG 1002
+VARF G
Sbjct: 34883 SVARFIG 34863
Score = 86.3 bits (182), Expect(3) = 2e-028
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = -3 / +1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V A W +KR+ VKS M LPMK A MWR SET QK SFLPWK
Sbjct: 35287 HVDVFLAPRKSW*LSKRITMDCTHVKSLFMFLFLLPMK*AFMWRLLSETRQKLLSFLPWK 35466
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 35467 *KVIPSPPMKRGSWQTAPG 35523
Score = 65.2 bits (136), Expect(3) = 2e-028
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -3 / +1
Query: 1001 PPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPR 822
P KRAT QS E + + S APP+ G+L LT* G VWP+TP TS ++ NLKP+
Sbjct: 34864 PMKRATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPK 35043
Query: 821 SRCARVS 801
SR A+ S
Sbjct: 35044 SR*AKQS 35064
Score = 57.0 bits (118), Expect(4) = 4e-064
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / -1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 35153 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 35061
Score = 35.9 bits (72), Expect(4) = 4e-064
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1 / -2
Query: 241 CNARCPHKCLIQCPSCKTFCLCDFY 315
C CP+ C ++C SCK C Y
Sbjct: 35719 CPKSCPYDCTVECASCKPICCKSIY 35645
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 35062 SSLVIP*L*ILESSSVIGTTLAVILKFP 35145
>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence
Length = 125894
Score = 132 bits (283), Expect(4) = 5e-064
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1 / +1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 21262 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNKNMKRDFTWVQSI 21441
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ A++T W
Sbjct: 21442 VILFDNHQLFLGAKKTSTW 21498
Score = 106 bits (227), Expect(4) = 5e-064
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1 / +1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGGA +Y +S LFS DC
Sbjct: 21721 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDC 21900
Query: 982 AVARFGG 1002
+VARF G
Sbjct: 21901 SVARFIG 21921
Score = 86.3 bits (182), Expect(3) = 2e-028
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = -3 / -1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V A W +KR+ VKS M LPMK A MWR SET QK SFLPWK
Sbjct: 21497 HVDVFLAPRKSW*LSKRITMDCTHVKSLFMFLFLLPMK*AFMWRLLSETRQKLLSFLPWK 21318
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 21317 *KVIPSPPMKRGSWQTAPG 21261
Score = 65.2 bits (136), Expect(3) = 2e-028
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -3 / -1
Query: 1001 PPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPR 822
P KRAT QS E + + S APP+ G+L LT* G VWP+TP TS ++ NLKP+
Sbjct: 21920 PMKRATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPK 21741
Query: 821 SRCARVS 801
SR A+ S
Sbjct: 21740 SR*AKQS 21720
Score = 57.0 bits (118), Expect(4) = 5e-064
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / +1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 21631 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 21723
Score = 35.9 bits (72), Expect(4) = 5e-064
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1 / +2
Query: 241 CNARCPHKCLIQCPSCKTFCLCDFY 315
C CP+ C ++C SCK C Y
Sbjct: 21065 CPKSCPYDCTVECASCKPICCKSIY 21139
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 21722 SSLVIP*L*ILESSSVIGTTLAVILKFP 21639
>gb|AC159125.9| Medicago truncatula clone mth2-189o22, WORKING DRAFT SEQUENCE, 4
ordered pieces
Length = 131459
Score = 132 bits (283), Expect(4) = 6e-064
Identities = 48/79 (60%), Positives = 59/79 (74%)
Frame = +1 / +2
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 9728 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNKNMKRDFTWVQSI 9907
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ A++T W
Sbjct: 9908 VILFDNHQLFLGAKKTSTW 9964
Score = 106 bits (227), Expect(4) = 6e-064
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1 / +2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGGA +Y +S LFS DC
Sbjct: 10187 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGARMPIMGGAKEYETSSLFSPDC 10366
Query: 982 AVARFGG 1002
+VARF G
Sbjct: 10367 SVARFIG 10387
Score = 86.3 bits (182), Expect(3) = 2e-028
Identities = 41/79 (51%), Positives = 47/79 (59%)
Frame = -3 / -3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V A W +KR+ VKS M LPMK A MWR SET QK SFLPWK
Sbjct: 9963 HVDVFLAPRKSW*LSKRITMDCTHVKSLFMFLFLLPMK*AFMWRLLSETRQKLLSFLPWK 9784
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 9783 *KVIPSPPMKRGSWQTAPG 9727
Score = 65.2 bits (136), Expect(3) = 2e-028
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = -3 / -3
Query: 1001 PPKRATAQSVEKRSEER*SGAPPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPR 822
P KRAT QS E + + S APP+ G+L LT* G VWP+TP TS ++ NLKP+
Sbjct: 10386 PMKRATEQSGENKLDVSYSFAPPIIGILAPMFTRLT*LGLYVWPNTPLTSLLKDKNLKPK 10207
Query: 821 SRCARVS 801
SR A+ S
Sbjct: 10206 SR*AKQS 10186
Score = 57.0 bits (118), Expect(4) = 6e-064
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / +2
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 10097 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 10189
Score = 35.9 bits (72), Expect(4) = 6e-064
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1 / +3
Query: 241 CNARCPHKCLIQCPSCKTFCLCDFY 315
C CP+ C ++C SCK C Y
Sbjct: 9531 CPKSCPYDCTVECASCKPICCKSIY 9605
Score = 34.1 bits (68), Expect(3) = 2e-028
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / -3
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 10188 SSLVIP*L*ILESSSVIGTTLAVILKFP 10105
>emb|CR511381.1| mth4-28I23FM3 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 622
Score = 134 bits (287), Expect(3) = 2e-058
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1 / -1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 622 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNENMKRDFTWVQSI 443
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ AQ+T W
Sbjct: 442 VILFDNHQLFLGAQKTSTW 386
Score = 92.3 bits (195), Expect(3) = 6e-029
Identities = 42/78 (53%), Positives = 48/78 (61%)
Frame = -3 / +3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V WA W +KR+ W VKS M LPMK ALMWR SET QK SFLP K
Sbjct: 387 HVDVFWAPRKSW*LSKRITMDWTHVKSLFMFSFLLPMK*ALMWRLLSETRQKLLSFLP*K 566
Query: 371 *KLLPSAPVKRGSPQDTP 318
*K++PS P+KRGS Q P
Sbjct: 567 *KVIPSPPMKRGSWQTAP 620
Score = 80.3 bits (169), Expect(3) = 2e-058
Identities = 29/53 (54%), Positives = 42/53 (79%)
Frame = +1 / -1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSS 960
D AHLDLGFKF L+++V+GVLGQTY+P+YV+ +N+ + P+MGG +Y +S
Sbjct: 163 DCFAHLDLGFKFLSLSNEVNGVLGQTYKPNYVSRVNIGAKRPIMGGGKEYETS 5
Score = 57.0 bits (118), Expect(3) = 2e-058
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / -1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 253 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 161
Score = 45.5 bits (93), Expect(3) = 6e-029
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 938 PPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVS 801
PP+ G+ LT* G VWP+TP TS ++ NL P+SR A+ S
Sbjct: 27 PPIIGLFAPMFTRLT*LGLYVWPNTPFTSLLKDKNLNPKSR*AKQS 164
Score = 34.1 bits (68), Expect(3) = 6e-029
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 162 SSLVIP*L*ILESSSVIGTTLAVILKFP 245
>gb|CG929132.1|CG929132 MBEIX05TR mth2 Medicago truncatula genomic clone 65B10, DNA
sequence
Length = 939
Score = 134 bits (288), Expect(3) = 2e-058
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1 / -2
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 617 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSI 438
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ AQ+T W
Sbjct: 437 VILFDNHQLFLGAQKTATW 381
Score = 95.9 bits (203), Expect(3) = 6e-029
Identities = 43/79 (54%), Positives = 49/79 (62%)
Frame = -3 / +1
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V WA W +KR+ W VKS M LPMK ALM R SET QK SFLPWK
Sbjct: 382 HVAVFWAPRKSW*LSKRITMDWTHVKSLFMFSFLLPMK*ALMCRFLSETRQKLLSFLPWK 561
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 562 *KVIPSPPMKRGSWQTAPG 618
Score = 81.3 bits (171), Expect(3) = 2e-058
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1 / -2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDY 951
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGG +Y
Sbjct: 158 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGAKMPIMGGGKEY 9
Score = 56.5 bits (117), Expect(3) = 2e-058
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / -2
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSR+HNYG+ +DD
Sbjct: 248 EVEGNFRITAKVVPITEEDSRVHNYGITKDD 156
Score = 45.5 bits (93), Expect(3) = 6e-029
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +1
Query: 938 PPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVS 801
PP+ G+ LT* G VWP+TP TS ++ NL P+SR A+ S
Sbjct: 22 PPIIGIFAPMFTRLT*LGLYVWPNTPLTSLLKDKNLNPKSR*AKQS 159
Score = 31.8 bits (63), Expect(3) = 6e-029
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3 / +1
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L ESS+V+GTTLA + K P
Sbjct: 157 SSLVIP*L*TLESSSVIGTTLAVILKFP 240
>gb|CG929270.1|CG929270 MBEBG04TF mth2 Medicago truncatula genomic clone 18B7, DNA sequence
Length = 812
Score = 134 bits (287), Expect(4) = 1e-057
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +1 / -2
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 574 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDNNLHINAHFIGRRNENMKRDFTWVQSI 395
Query: 496 GIRFAHHHLYVAAQRTPRW 552
I F +H L++ AQ+T W
Sbjct: 394 VILFDNHQLFLGAQKTSTW 338
Score = 95.0 bits (201), Expect(3) = 3e-027
Identities = 43/79 (54%), Positives = 49/79 (62%)
Frame = -3 / +3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V WA W +KR+ W VKS M LPMK ALMWR SET QK SFLP K
Sbjct: 339 HVDVFWAPRKSW*LSKRITMDWTHVKSLFMFSFLLPMK*ALMWRLLSETRQKLLSFLP*K 518
Query: 371 *KLLPSAPVKRGSPQDTPG 315
*K++PS P+KRGS Q PG
Sbjct: 519 *KVIPSPPMKRGSWQTAPG 575
Score = 62.9 bits (131), Expect(4) = 1e-057
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +1 / -2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNV 912
D AHLDLGFKF ++++V+GVLGQTY+P+YV+ +N+
Sbjct: 115 DCFAHLDLGFKFLSVSNEVNGVLGQTYKPNYVSRVNI 5
Score = 57.0 bits (118), Expect(4) = 1e-057
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / -2
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 205 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 113
Score = 37.7 bits (76), Expect(3) = 3e-027
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -3 / +3
Query: 899 LT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVS 801
LT* G VWP+TP TS + NL P+SR A+ S
Sbjct: 18 LT*LGLYVWPNTPFTSLLTDKNLNPKSR*AKQS 116
Score = 34.5 bits (69), Expect(4) = 1e-057
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 241 CNARCPHKCLIQCPSCKTFC 300
C CP+ C ++C SCK C
Sbjct: 800 CPKSCPYDCTVECASCKPIC 741
Score = 34.1 bits (68), Expect(3) = 3e-027
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L I ESS+V+GTTLA + K P
Sbjct: 114 SSLVIP*L*ILESSSVIGTTLAVILKFP 197
>emb|CR481626.1| mth2-145I19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 622
Score = 109 bits (232), Expect(4) = 6e-054
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +1 / -1
Query: 367 FYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTP 546
FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++ I F +H L++ AQ+T
Sbjct: 571 FYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSIVILFDNHQLFLGAQKTA 392
Query: 547 RW 552
W
Sbjct: 391 TW 386
Score = 81.3 bits (171), Expect(4) = 6e-054
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1 / -1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDY 951
D AHLDLGFKF L+++V GVLGQTY+P+YV+ +N+ + MP+MGG +Y
Sbjct: 163 DCFAHLDLGFKFLSLSNEVSGVLGQTYKPNYVSRVNIGAKMPIMGGGKEY 14
Score = 71.2 bits (149), Expect(4) = 8e-025
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = -3 / +3
Query: 551 HLGVLWAAT*RWWCAKRMPSAWIQVKSRLMAGLRLPMKCALMWRAASETMQKSRSFLPWK 372
H+ V WA W +KR+ W VKS M LPMK ALM R SET QK SFLPWK
Sbjct: 387 HVAVFWAPRKSW*LSKRITMDWTHVKSLFMFSFLLPMK*ALMCRFLSETRQKLLSFLPWK 566
Query: 371 *K 366
*K
Sbjct: 567 *K 572
Score = 56.5 bits (117), Expect(4) = 6e-054
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +1 / -1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSR+HNYG+ +DD
Sbjct: 253 EVEGNFRITAKVVPITEEDSRVHNYGITKDD 161
Score = 45.5 bits (93), Expect(4) = 8e-025
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -3 / +3
Query: 938 PPMTGMLDVTLRLLT*SGR*VWPSTPCTSSVRS*NLKPRSRCARVS 801
PP+ G+ LT* G VWP+TP TS ++ NL P+SR A+ S
Sbjct: 27 PPIIGIFAPMFTRLT*LGLYVWPNTPLTSLLKDKNLNPKSR*AKQS 164
Score = 31.8 bits (63), Expect(4) = 8e-025
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3 / +3
Query: 797 SSSLTP*LWIRESSAVMGTTLATMRKAP 714
SS + P*L ESS+V+GTTLA + K P
Sbjct: 162 SSLVIP*L*TLESSSVIGTTLAVILKFP 245
Score = 28.1 bits (55), Expect(4) = 6e-054
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / -3
Query: 319 GVSCGDPRFTGADGNNF 369
G C DPRF G DG F
Sbjct: 620 GAVCQDPRFIGGDGITF 570
Score = 27.2 bits (53), Expect(4) = 8e-025
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / +1
Query: 368 KLLPSAPVKRGSPQDTP 318
K++PS P+KRGS Q P
Sbjct: 571 KVIPSPPMKRGSWQTAP 621
>emb|CR511380.1| mth4-28I23FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 559
Score = 96.4 bits (204), Expect(3) = 4e-048
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +1 / -1
Query: 379 GKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALGIRFAHHHLYVAAQRTPRW 552
GKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++ I F +H L++ AQ+T W
Sbjct: 559 GKKDNNFCLVSDNNLHINAHFIGRRNENMKRDFTWVQSIVILFDNHQLFLGAQKTSTW 386
Score = 83.1 bits (175), Expect(3) = 4e-048
Identities = 30/53 (56%), Positives = 43/53 (81%)
Frame = +1 / -1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSS 960
D AHLDLGFKF L+++V+GVLGQTY+P+YV+ +N+ + MP+MGG +Y +S
Sbjct: 163 DCFAHLDLGFKFLSLSNEVNGVLGQTYKPNYVSRVNIGAKMPIMGGGKEYETS 5
Score = 57.0 bits (118), Expect(3) = 4e-048
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +1 / -1
Query: 706 ELRGAFRIVASVVPITAEDSRIHNYGVREDD 798
E+ G FRI A VVPIT EDSRIHNYG+ +DD
Sbjct: 253 EVEGNFRITAKVVPITEEDSRIHNYGITKDD 161
>gb|AJ846042.1|AJ846042 AJ846042 MtSC4 Medicago truncatula cDNA clone MtC402L23N1, mRNA
sequence
Length = 780
Score = 95.5 bits (202), Expect(3) = 4e-041
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = +1 / -3
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C D RF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 709 GSACLDXRFVGADGIVFYFHGRRNGHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 530
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H+ + A + W
Sbjct: 529 VLFDSHNFSIEATPSSIW 476
Score = 77.6 bits (163), Expect(3) = 4e-041
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +1 / -3
Query: 796 DGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFST 975
D D AHLD+ FKFY L+ V GVLG+TY+PD+ N MPV+GG Y + L S
Sbjct: 253 DDDCFAHLDVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSA 74
Query: 976 DCAVARFGGRR 1008
DC F +
Sbjct: 73 DCLACIFSSAK 41
Score = 40.9 bits (83), Expect(3) = 4e-041
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / -3
Query: 727 IVASVVPITAEDSRIHNYGVREDD 798
I +VVP+T EDSRIHNY + +DD
Sbjct: 316 ISVNVVPVTKEDSRIHNYQIPDDD 245
>emb|CR331661.1| mte1-60L6FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 826
Score = 105 bits (225), Expect(2) = 5e-039
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / +2
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 83 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALS 262
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 263 LMFDTHTLVIAANRVTQW 316
Score = 80.8 bits (170), Expect(2) = 5e-039
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / +2
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHL+ FKF + TD + GVLGQTYRP YV+ + MP+MGG Y + LFST C
Sbjct: 551 DAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTC 730
Query: 982 AVARF 996
+ RF
Sbjct: 731 KLCRF 745
>gb|AC144405.28| Medicago truncatula clone mth2-16m18, WORKING DRAFT SEQUENCE, 7
unordered pieces
Length = 109873
Score = 105 bits (225), Expect(2) = 6e-037
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / -1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 82567 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALS 82388
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 82387 LMFDTHTLVIAANRVTQW 82334
Score = 80.8 bits (170), Expect(2) = 6e-037
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / -1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHL+ FKF + TD + GVLGQTYRP YV+ + MP+MGG Y + LFST C
Sbjct: 82099 DAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTC 81920
Query: 982 AVARF 996
+ RF
Sbjct: 81919 KLCRF 81905
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
Length = 129728
Score = 105 bits (225), Expect(2) = 8e-037
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / +3
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 34533 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDDFQINAHFIGTRPQGRTRDYTWVQALS 34712
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 34713 VMFDTHTLVIAANRVTQW 34766
Score = 105 bits (225), Expect(2) = 8e-037
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 17314 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALS 17493
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 17494 LMFDTHTLVIAANRVTQW 17547
Score = 80.8 bits (170), Expect(2) = 8e-037
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / +3
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHL+ FKF + TD + GVLGQTYRP YV+ + MP+MGG Y + LFST C
Sbjct: 35001 DAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTC 35180
Query: 982 AVARF 996
+ RF
Sbjct: 35181 KLCRF 35195
Score = 80.8 bits (170), Expect(2) = 8e-037
Identities = 33/65 (50%), Positives = 41/65 (63%)
Frame = +1 / +1
Query: 802 DTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFSTDC 981
D AHL+ FKF + TD + GVLGQTYRP YV+ + MP+MGG Y + LFST C
Sbjct: 17782 DAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTC 17961
Query: 982 AVARF 996
+ RF
Sbjct: 17962 KLCRF 17976
>gb|CB891305.1|CB891305 EST648274 KV3 Medicago truncatula cDNA clone KV3-49F18, mRNA
sequence
Length = 775
Score = 100 bits (213), Expect(5) = 1e-033
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C DPRF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 208 GSACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 387
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H+ + A + W
Sbjct: 388 VLFDSHNFSIEATPSSIW 441
Score = 40.9 bits (83), Expect(5) = 1e-033
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 727 IVASVVPITAEDSRIHNYGVREDD 798
I +VVP+T EDSRIHNY + +DD
Sbjct: 601 ISVNVVPVTKEDSRIHNYQIPDDD 672
Score = 31.3 bits (62), Expect(5) = 1e-033
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +1
Query: 796 DGDTLAHLDLGFKFYDLTDDV 858
D D AHLD+ FKFY L+ V
Sbjct: 664 DDDCFAHLDVQFKFYGLSSKV 726
Score = 27.6 bits (54), Expect(5) = 1e-033
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 862 GVLGQTYRPDYVN 900
GVLG+TY+PD+ N
Sbjct: 729 GVLGRTYQPDFQN 767
Score = 24.0 bits (46), Expect(5) = 1e-033
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 190 TLKCTNIKSNKTTCSATCNARCPHK 264
T CTN KS C A+CP +
Sbjct: 34 TQTCTNRKSRCFLKKLPCPAQCPSR 108
>emb|CR349725.1| mte1-84M2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 431
Score = 130 bits (279), Expect = 4e-029
Identities = 48/76 (63%), Positives = 58/76 (76%)
Frame = +1 / +1
Query: 316 PGVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQAL 495
PG C DPRF G DG FYFHGKKD +FC+VSD LHINAHFIG+RN M RDFTW+Q++
Sbjct: 142 PGAVCQDPRFIGGDGITFYFHGKKDNNFCLVSDKNLHINAHFIGRRNENMKRDFTWVQSI 321
Query: 496 GIRFAHHHLYVAAQRT 543
I F +H L++ AQ+T
Sbjct: 322 VILFDNHQLFLGAQKT 369
>gb|AW299027.1|AW299027 EST305701 KV2 Medicago truncatula cDNA clone KV2-11C14, mRNA
sequence
Length = 671
Score = 100 bits (213), Expect(3) = 4e-026
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C DPRF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 208 GSACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 387
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H+ + A + W
Sbjct: 388 VLFDSHNFSIEATPSSIW 441
Score = 38.2 bits (77), Expect(3) = 4e-026
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1 / +1
Query: 727 IVASVVPITAEDSRIHNYGVRED 795
I +VVP+T EDSRIHNY + +D
Sbjct: 601 ISVNVVPVTKEDSRIHNYQIPDD 669
Score = 24.0 bits (46), Expect(3) = 4e-026
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 190 TLKCTNIKSNKTTCSATCNARCPHK 264
T CTN KS C A+CP +
Sbjct: 34 TQTCTNRKSRCFLKKLPCPAQCPSR 108
>gb|CA921313.1|CA921313 EST639031 MTUS Medicago truncatula cDNA clone MTUS-38H1, mRNA
sequence
Length = 765
Score = 77.6 bits (163), Expect(3) = 3e-022
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +1 / -2
Query: 796 DGDTLAHLDLGFKFYDLTDDVHGVLGQTYRPDYVNSLNVTSNMPVMGGAPDYLSSDLFST 975
D D AHLD+ FKFY L+ V GVLG+TY+PD+ N MPV+GG Y + L S
Sbjct: 458 DDDCFAHLDVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTKSLVSA 279
Query: 976 DCAVARFGGRR 1008
DC F +
Sbjct: 278 DCLACIFSSAK 246
Score = 40.9 bits (83), Expect(3) = 3e-022
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 727 IVASVVPITAEDSRIHNYGVREDD 798
I +VVP+T EDSRIHNY + +DD
Sbjct: 521 ISVNVVPVTKEDSRIHNYQIPDDD 450
Score = 31.3 bits (62), Expect(3) = 3e-022
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1 / -2
Query: 475 FTWIQALGIRFAHHHLYVAAQRTPRW 552
+TWIQALG+ F H+ + A + W
Sbjct: 758 YTWIQALGVLFDSHNFSMKATPSSIW 681
>gb|CG942894.1|CG942894 MBEGW86TR mth2 Medicago truncatula genomic clone 53P3, DNA sequence
Length = 762
Score = 105 bits (225), Expect = 1e-021
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 265 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALS 444
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 445 LMFDTHTLVIAANRVTQW 498
>emb|CR969622.1| mth4-23B4FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 643
Score = 105 bits (225), Expect = 1e-021
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G C DPRF G DG FYFHG K +F IVSD INAHFIG R +RD+TW+QAL
Sbjct: 265 GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALS 444
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H L +AA R +W
Sbjct: 445 LMFDTHTLVIAANRVTQW 498
>gb|AL370334.1|AL370334 MtBA37B07R1 MtBA Medicago truncatula cDNA clone MtBA37B07 T7, mRNA
sequence
Length = 550
Score = 100 bits (213), Expect(2) = 2e-021
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +1 / -3
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C DPRF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 275 GSACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 96
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H+ + A + W
Sbjct: 95 VLFDSHNFSIEATPSSIW 42
Score = 24.0 bits (46), Expect(2) = 2e-021
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / -3
Query: 190 TLKCTNIKSNKTTCSATCNARCPHK 264
T CTN KS C A+CP +
Sbjct: 449 TQTCTNRKSRCFLKKLPCPAQCPSR 375
>gb|BE203251.1|BE203251 EST403273 KV1 Medicago truncatula cDNA clone pKV1-4P2, mRNA
sequence
Length = 491
Score = 100 bits (213), Expect(2) = 7e-021
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +1 / +1
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C DPRF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 208 GSACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 387
Query: 499 IRFAHHHLYVAAQRTPRW 552
+ F H+ + A + W
Sbjct: 388 VLFDSHNFSIEATPSSIW 441
Score = 22.1 bits (42), Expect(2) = 7e-021
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +1 / +1
Query: 190 TLKCTNIKSNKTTCSATCNARCPHK 264
T CTN +S C A+CP +
Sbjct: 34 TQTCTNRESRCFLKKLPCPAQCPSR 108
>gb|AL366723.1|AL366723 MtBA09G06F1 MtBA Medicago truncatula cDNA clone MtBA09G06 T3, mRNA
sequence
Length = 495
Score = 98.2 bits (208), Expect(2) = 1e-020
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1 / +2
Query: 319 GVSCGDPRFTGADGNNFYFHGKKDRDFCIVSDAALHINAHFIGKRNPAMSRDFTWIQALG 498
G +C DPRF GADG FYFHG+++ F +VSD L INA FIG R RD+TWIQALG
Sbjct: 275 GSACLDPRFVGADGIVFYFHGRRNEHFSLVSDTNLQINARFIGLRPQGRPRDYTWIQALG 454
Query: 499 IRFAHHHLYVAA 534
+ F H+ + A
Sbjct: 455 VLFDSHNFSIEA 490
Score = 24.0 bits (46), Expect(2) = 1e-020
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1 / +2
Query: 190 TLKCTNIKSNKTTCSATCNARCPHK 264
T CTN KS C A+CP +
Sbjct: 101 TQTCTNRKSRCFLKKLPCPAQCPSR 175
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 641,747,640
Number of Sequences: 392609
Number of extensions: 6624830
Number of successful extensions: 29762
Number of sequences better than 1.0e-020: 27
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 43965637677
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)