TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635788.2.1
(753 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC128638.34| Medicago truncatula clone mth2-36h10, compl... 101 4e-032
gb|BF635148.1|BF635148 NF080D02DT1F1025 Drought Medicago tr... 101 5e-032
gb|AW691575.1|AW691575 NF046E09ST1F1000 Developing stem Med... 101 5e-032
gb|BI309325.1|BI309325 EST530735 GPOD Medicago truncatula c... 101 5e-032
gb|BE204918.1|BE204918 EST397538 KV0 Medicago truncatula cD... 101 5e-032
gb|CX524331.1|CX524331 s13dNF14E08AT065_448006 Aphid-Infect... 101 5e-032
gb|DW018518.1|DW018518 EST1227479 MTY Medicago truncatula c... 101 2e-031
gb|BF521489.1|BF521489 EST458965 DSIL Medicago truncatula c... 101 4e-031
gb|AW695338.1|AW695338 NF093F09ST1F1078 Developing stem Med... 65 2e-028
gb|AW691196.2|AW691196 NF042B12ST1F1000 Developing stem Med... 101 2e-027
gb|AC139344.17| Medicago truncatula clone mth2-34b22, compl... 92 6e-026
gb|DW017157.1|DW017157 EST1226118 MTY Medicago truncatula c... 92 7e-026
gb|CA918276.1|CA918276 EST642423 GPOD Medicago truncatula c... 92 7e-026
gb|BG583025.1|BG583025 EST484765 GVN Medicago truncatula cD... 92 7e-026
gb|CA990381.1|CA990381 EST643889 GESD Medicago truncatula c... 92 7e-026
gb|CF069744.1|CF069744 EST670465 MTUS Medicago truncatula c... 92 7e-026
gb|DW015094.1|DW015094 EST1224055 MTY Medicago truncatula c... 91 1e-025
gb|CA991376.1|CA991376 EST644884 GESD Medicago truncatula c... 88 2e-024
gb|DW016484.1|DW016484 EST1225445 MTY Medicago truncatula c... 88 3e-024
gb|AC141108.3| Medicago truncatula clone mth2-22g6, complet... 88 4e-024
gb|DW017675.1|DW017675 EST1226636 MTY Medicago truncatula c... 88 4e-024
gb|CX525952.1|CX525952 s13dNF32F10AT091_509648 Aphid-Infect... 88 4e-024
gb|DW017946.1|DW017946 EST1226907 MTY Medicago truncatula c... 88 4e-024
gb|AJ503903.1|AJ503903 AJ503903 MTAMP Medicago truncatula c... 83 8e-022
>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence
Length = 110895
Score = 101 bits (216), Expect(3) = 4e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 40456 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 40635
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 40636 GNSDDGEYPLNVT 40674
Score = 42.3 bits (86), Expect(3) = 4e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 40357 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 40449
Score = 33.1 bits (66), Expect(3) = 4e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 40717 TTVSNTIYSDNQLAVYQVDQVLLPMALF 40800
>gb|BF635148.1|BF635148 NF080D02DT1F1025 Drought Medicago truncatula cDNA clone NF080D02DT
5', mRNA sequence
Length = 680
Score = 101 bits (216), Expect(3) = 5e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 247 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 426
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 427 GNSDDGEYPLNVT 465
Score = 42.3 bits (86), Expect(3) = 5e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 148 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 240
Score = 33.1 bits (66), Expect(3) = 5e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 508 TTVSNTIYSDNQLAVYQVDQVLLPMALF 591
>gb|AW691575.1|AW691575 NF046E09ST1F1000 Developing stem Medicago truncatula cDNA clone
NF046E09ST 5', mRNA sequence
Length = 661
Score = 101 bits (216), Expect(3) = 5e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 252 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 431
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 432 GNSDDGEYPLNVT 470
Score = 42.3 bits (86), Expect(3) = 5e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 153 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 245
Score = 33.1 bits (66), Expect(3) = 5e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 513 TTVSNTIYSDNQLAVYQVDQVLLPMALF 596
>gb|BI309325.1|BI309325 EST530735 GPOD Medicago truncatula cDNA clone pGPOD-11I20 5' end,
mRNA sequence
Length = 641
Score = 101 bits (216), Expect(3) = 5e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 227 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 406
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 407 GNSDDGEYPLNVT 445
Score = 42.3 bits (86), Expect(3) = 5e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 128 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 220
Score = 33.1 bits (66), Expect(3) = 5e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +2
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 488 TTVSNTIYSDNQLAVYQVDQVLLPMALF 571
>gb|BE204918.1|BE204918 EST397538 KV0 Medicago truncatula cDNA clone pKV0-18L5, mRNA
sequence
Length = 620
Score = 101 bits (216), Expect(3) = 5e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 129 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 308
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 309 GNSDDGEYPLNVT 347
Score = 42.3 bits (86), Expect(3) = 5e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 30 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 122
Score = 33.1 bits (66), Expect(3) = 5e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 390 TTVSNTIYSDNQLAVYQVDQVLLPMALF 473
>gb|CX524331.1|CX524331 s13dNF14E08AT065_448006 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 590
Score = 101 bits (216), Expect(3) = 5e-032
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 243 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 422
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 423 GNSDDGEYPLNVT 461
Score = 42.3 bits (86), Expect(3) = 5e-032
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 144 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 236
Score = 33.1 bits (66), Expect(3) = 5e-032
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L VYQV +VLLP AL+
Sbjct: 504 TTVSNTIYSDNQLAVYQVDQVLLPMALF 587
>gb|DW018518.1|DW018518 EST1227479 MTY Medicago truncatula cDNA clone MTYB754, mRNA
sequence
Length = 853
Score = 101 bits (216), Expect(3) = 2e-031
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 276 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 455
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 456 GNSDDGEYPLNVT 494
Score = 42.3 bits (86), Expect(3) = 2e-031
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 177 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 269
Score = 31.3 bits (62), Expect(3) = 2e-031
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1 / +3
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWALY 630
T + +Y+ ++L YQV +VLLP AL+
Sbjct: 537 TTVSNTIYSDNQLAAYQVDQVLLPMALF 620
>gb|BF521489.1|BF521489 EST458965 DSIL Medicago truncatula cDNA clone pDSIL-43D23, mRNA
sequence
Length = 598
Score = 101 bits (216), Expect(3) = 4e-031
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 259 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 438
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 439 GNSDDGEYPLNVT 477
Score = 42.3 bits (86), Expect(3) = 4e-031
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 160 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 252
Score = 29.9 bits (59), Expect(3) = 4e-031
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1 / +1
Query: 547 TLDATPLYAGDRLVVYQVSKVLLPWA 624
T + +Y+ ++L VYQV +VLLP A
Sbjct: 520 TTVSNTIYSDNQLAVYQVDQVLLPMA 597
>gb|AW695338.1|AW695338 NF093F09ST1F1078 Developing stem Medicago truncatula cDNA clone
NF093F09ST 5', mRNA sequence
Length = 659
Score = 64.8 bits (135), Expect(4) = 2e-028
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNP 447
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q+ P
Sbjct: 254 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQVSNCK*P 418
Score = 42.3 bits (86), Expect(4) = 2e-028
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 155 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 247
Score = 41.8 bits (85), Expect(4) = 2e-028
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +1 / +3
Query: 424 QLETVSNPLRTQAGDTGRGKYPLNLT 501
+ +T SNPL TQAG++ G+YPLN+T
Sbjct: 396 RFQTASNPLHTQAGNSDDGEYPLNVT 473
Score = 33.1 bits (66), Expect(4) = 2e-028
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 550 LDATPLYAGDRLVVYQVSKVLLPWALY 630
L + +Y+ ++L VYQV +VLLP AL+
Sbjct: 520 LCSNTIYSDNQLAVYQVDQVLLPMALF 600
>gb|AW691196.2|AW691196 NF042B12ST1F1000 Developing stem Medicago truncatula cDNA clone
NF042B12ST 5', mRNA sequence
Length = 597
Score = 101 bits (216), Expect(2) = 2e-027
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 247 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 426
Query: 463 GDTGRGKYPLNLT 501
G++ G+YPLN+T
Sbjct: 427 GNSDDGEYPLNVT 465
Score = 42.3 bits (86), Expect(2) = 2e-027
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 148 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 240
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence
Length = 129728
Score = 91.8 bits (194), Expect(3) = 6e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 59053 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 59232
Query: 463 GD 468
GD
Sbjct: 59233 GD 59238
Score = 36.3 bits (73), Expect(3) = 6e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 58954 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 59046
Score = 28.1 bits (55), Expect(3) = 6e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 59329 VYTDHQLAVYQVDKVLLP 59382
>gb|DW017157.1|DW017157 EST1226118 MTY Medicago truncatula cDNA clone MTYAQ19, mRNA
sequence
Length = 832
Score = 91.8 bits (194), Expect(3) = 7e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 291 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 470
Query: 463 GD 468
GD
Sbjct: 471 GD 476
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 192 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 284
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 567 VYTDHQLAVYQVDKVLLP 620
>gb|CA918276.1|CA918276 EST642423 GPOD Medicago truncatula cDNA clone GPOD-38F24, mRNA
sequence
Length = 780
Score = 91.8 bits (194), Expect(3) = 7e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 248 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 427
Query: 463 GD 468
GD
Sbjct: 428 GD 433
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 149 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 241
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 524 VYTDHQLAVYQVDKVLLP 577
>gb|BG583025.1|BG583025 EST484765 GVN Medicago truncatula cDNA clone pGVN-71K12 5' end,
mRNA sequence
Length = 778
Score = 91.8 bits (194), Expect(3) = 7e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 224 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 403
Query: 463 GD 468
GD
Sbjct: 404 GD 409
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 125 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 217
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 500 VYTDHQLAVYQVDKVLLP 553
>gb|CA990381.1|CA990381 EST643889 GESD Medicago truncatula cDNA clone GESD-28B9, mRNA
sequence
Length = 768
Score = 91.8 bits (194), Expect(3) = 7e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 242 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 421
Query: 463 GD 468
GD
Sbjct: 422 GD 427
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 143 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 235
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 518 VYTDHQLAVYQVDKVLLP 571
>gb|CF069744.1|CF069744 EST670465 MTUS Medicago truncatula cDNA clone MTUS-23G9, mRNA
sequence
Length = 752
Score = 91.8 bits (194), Expect(3) = 7e-026
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 224 SNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 403
Query: 463 GD 468
GD
Sbjct: 404 GD 409
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 125 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 217
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 500 VYTDHQLAVYQVDKVLLP 553
>gb|DW015094.1|DW015094 EST1224055 MTY Medicago truncatula cDNA clone MTYA083, mRNA
sequence
Length = 765
Score = 91.3 bits (193), Expect(3) = 1e-025
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +1 / +3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+FAP D++FS L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 291 SNGGLTLFAPNDNSFSGLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 470
Query: 463 GD 468
GD
Sbjct: 471 GD 476
Score = 36.3 bits (73), Expect(3) = 1e-025
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 192 IIRILKKAGGFTTLIRLLQTTQVSTQINSQL 284
Score = 28.1 bits (55), Expect(3) = 1e-025
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 567 VYTDHQLAVYQVDKVLLP 620
>gb|CA991376.1|CA991376 EST644884 GESD Medicago truncatula cDNA clone GESD-32F2, mRNA
sequence
Length = 707
Score = 88.1 bits (186), Expect(3) = 2e-024
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SNGGLT+ AP D++FS+L G LNSLSD+QK L+QFH++ + + +T+SNP+RTQA
Sbjct: 98 SNGGLTLSAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA 277
Query: 463 GD 468
GD
Sbjct: 278 GD 283
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 187 ILSKAGQFTKFLQLLQSTREAEQITNQL 270
IL KAG FT ++LLQ+T+ + QI +QL
Sbjct: 8 ILKKAGGFTTLIRLLQTTQVSTQINSQL 91
Score = 28.1 bits (55), Expect(3) = 2e-024
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+Y +L VYQV KVLLP
Sbjct: 374 VYTDHQLAVYQVDKVLLP 427
>gb|DW016484.1|DW016484 EST1225445 MTY Medicago truncatula cDNA clone MTYAH75, mRNA
sequence
Length = 776
Score = 88.1 bits (186), Expect(3) = 3e-024
Identities = 35/62 (56%), Positives = 48/62 (77%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D++FS L G LNSL+DQQK+ L+QFH + + + + +T+SNP+RTQA
Sbjct: 277 SNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKSELIQFHELPSFVALSNFDTLSNPVRTQA 456
Query: 463 GD 468
GD
Sbjct: 457 GD 462
Score = 36.3 bits (73), Expect(3) = 3e-024
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ A QI QL
Sbjct: 178 IIRILKKAGGFTTLIRLLQTTQVATQINAQL 270
Score = 26.3 bits (51), Expect(3) = 3e-024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVLLP 618
+++ +L +YQV KVLLP
Sbjct: 553 VFSDHQLAIYQVDKVLLP 606
>gb|AC141108.3| Medicago truncatula clone mth2-22g6, complete sequence
Length = 119745
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +1 / -3
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D++FS L G LNSL+DQQK L+QFH + + + + +T+SNP+RTQA
Sbjct: 35719 SNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFVALSNFDTLSNPVRTQA 35540
Query: 463 GD 468
GD
Sbjct: 35539 GD 35534
Score = 36.3 bits (73), Expect(3) = 4e-024
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ A QI QL
Sbjct: 35818 IIRILKKAGGFTTLIRLLQTTQVATQINAQL 35726
Score = 26.3 bits (51), Expect(3) = 4e-024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 565 LYAGDRLVVYQVSKVLLP 618
+++ +L +YQV KVLLP
Sbjct: 35443 VFSDHQLAIYQVDKVLLP 35390
>gb|DW017675.1|DW017675 EST1226636 MTY Medicago truncatula cDNA clone MTYAW59, mRNA
sequence
Length = 833
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D++FS L G LNSL+DQQK L+QFH + + + + +T+SNP+RTQA
Sbjct: 278 SNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFVALSNFDTLSNPVRTQA 457
Query: 463 GD 468
GD
Sbjct: 458 GD 463
Score = 36.3 bits (73), Expect(3) = 4e-024
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ A QI QL
Sbjct: 179 IIRILKKAGGFTTLIRLLQTTQVATQINAQL 271
Score = 26.3 bits (51), Expect(3) = 4e-024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 565 LYAGDRLVVYQVSKVLLP 618
+++ +L +YQV KVLLP
Sbjct: 554 VFSDHQLAIYQVDKVLLP 607
>gb|CX525952.1|CX525952 s13dNF32F10AT091_509648 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 632
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D++FS L G LNSL+DQQK L+QFH + + + + +T+SNP+RTQA
Sbjct: 259 SNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFVALSNFDTLSNPVRTQA 438
Query: 463 GD 468
GD
Sbjct: 439 GD 444
Score = 36.3 bits (73), Expect(3) = 4e-024
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ A QI QL
Sbjct: 160 IIRILKKAGGFTTLIRLLQTTQVATQINAQL 252
Score = 26.3 bits (51), Expect(3) = 4e-024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVLLP 618
+++ +L +YQV KVLLP
Sbjct: 535 VFSDHQLAIYQVDKVLLP 588
>gb|DW017946.1|DW017946 EST1226907 MTY Medicago truncatula cDNA clone MTYB024, mRNA
sequence
Length = 602
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = +1 / +1
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D++FS L G LNSL+DQQK L+QFH + + + + +T+SNP+RTQA
Sbjct: 139 SNNGLTLFAPNDNSFSTLKPGFLNSLNDQQKNELIQFHELPSFVALSNFDTLSNPVRTQA 318
Query: 463 GD 468
GD
Sbjct: 319 GD 324
Score = 36.3 bits (73), Expect(3) = 4e-024
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
I IL KAG FT ++LLQ+T+ A QI QL
Sbjct: 40 IIRILKKAGGFTTLIRLLQTTQVATQINAQL 132
Score = 26.3 bits (51), Expect(3) = 4e-024
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 565 LYAGDRLVVYQVSKVLLP 618
+++ +L +YQV KVLLP
Sbjct: 415 VFSDHQLAIYQVDKVLLP 468
>gb|AJ503903.1|AJ503903 AJ503903 MTAMP Medicago truncatula cDNA clone mtgmadc120039g01,
mRNA sequence
Length = 450
Score = 82.6 bits (174), Expect(2) = 8e-022
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1 / +2
Query: 283 SNGGLTVFAPPDSAFSALPAGTLNSLSDQQKTSLVQFHVVSAALPAAQLETVSNPLRTQA 462
SN GLT+FAP D+AFS+L +GTLNS+S Q + L+QFH++ +Q +T SNPL TQA
Sbjct: 269 SNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQA 448
Score = 42.3 bits (86), Expect(2) = 8e-022
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +1 / +2
Query: 178 ITAILSKAGQFTKFLQLLQSTREAEQITNQL 270
IT +L KAGQFT F++LL++T+ +++I +QL
Sbjct: 170 ITKVLEKAGQFTTFIKLLKATQVSDRINSQL 262
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 246,958,559
Number of Sequences: 392609
Number of extensions: 1853010
Number of successful extensions: 12727
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 24704515220
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)