TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8616263.2.1
(509 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL371739.1|AL371739 MtBA46B10R1 MtBA Medicago truncatula... 186 3e-046
gb|CA923183.1|CA923183 EST640901 MTUS Medicago truncatula c... 186 3e-046
gb|CA923177.1|CA923177 EST640895 MTUS Medicago truncatula c... 186 3e-046
gb|CA923196.1|CA923196 EST640914 MTUS Medicago truncatula c... 183 1e-045
gb|CB891121.1|CB891121 EST648090 KV3 Medicago truncatula cD... 180 1e-044
gb|CA917739.1|CA917739 EST641886 GPOD Medicago truncatula c... 180 2e-044
gb|CA917740.1|CA917740 EST641887 GPOD Medicago truncatula c... 180 2e-044
gb|BI263580.1|BI263580 NF086G05PL1F1040 Phosphate starved l... 169 3e-041
gb|CA917068.1|CA917068 EST641215 GPOD Medicago truncatula c... 169 3e-041
gb|BI309197.1|BI309197 EST530607 GPOD Medicago truncatula c... 166 2e-040
gb|BG645927.1|BG645927 EST507546 KV3 Medicago truncatula cD... 164 8e-040
gb|AW126324.2|AW126324 N100431e rootphos(-) Medicago trunca... 157 1e-037
gb|AC144514.10| Medicago truncatula clone mth2-12j2, comple... 93 1e-034
gb|AC135467.15| Medicago truncatula clone mth2-34h12, compl... 93 1e-034
emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2... 85 3e-033
emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4... 94 4e-033
gb|AL376231.1|AL376231 MtBB22B12R1 MtBB Medicago truncatula... 138 6e-032
gb|CA921793.1|CA921793 EST639511 MTUS Medicago truncatula c... 138 6e-032
gb|CB891497.1|CB891497 EST648466 KV3 Medicago truncatula cD... 138 6e-032
emb|CT009652.1| Medicago truncatula chromosome 5 clone mth2... 75 1e-026
gb|BI309188.1|BI309188 EST530598 GPOD Medicago truncatula c... 120 1e-026
gb|BI272580.1|BI272580 NF024B08FL1F1064 Developing flower M... 119 3e-026
gb|BG649004.1|BG649004 EST510623 HOGA Medicago truncatula c... 105 5e-022
>gb|AL371739.1|AL371739 MtBA46B10R1 MtBA Medicago truncatula cDNA clone MtBA46B10 T7, mRNA
sequence
Length = 550
Score = 186 bits (400), Expect = 3e-046
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = -1 / +1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D DP FNLVDPVERNT+GVP+GGWVAIRFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 4 DSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 183
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QKLLPPP+DLPKC*L
Sbjct: 184 LDGKLPNQKLLPPPADLPKC*L 249
Score = 124 bits (265), Expect = 1e-027
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = +1 / -3
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGGS+F G PS+T HAILRP +VC SK QCMN TPGLSAR +ATHPP GTP
Sbjct: 242 HLGRSAGGGSNF*FGSFPSNTIHAILRPQLVCTSK*QCMNHTPGLSARNLIATHPPDGTP 63
Query: 451 TVLRSTGSTRLNLDGSL 501
V STGSTRL GSL
Sbjct: 62 IVFLSTGSTRLKFLGSL 12
>gb|CA923183.1|CA923183 EST640901 MTUS Medicago truncatula cDNA clone MTUS-64C5, mRNA
sequence
Length = 668
Score = 186 bits (400), Expect = 3e-046
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D DP FNLVDPVERNT+GVP+GGWVAIRFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 377 DSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 198
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QKLLPPP+DLPKC*L
Sbjct: 197 LDGKLPNQKLLPPPADLPKC*L 132
Score = 124 bits (265), Expect = 1e-027
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = +1 / +1
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGGS+F G PS+T HAILRP +VC SK QCMN TPGLSAR +ATHPP GTP
Sbjct: 139 HLGRSAGGGSNF*FGSFPSNTIHAILRPQLVCTSK*QCMNHTPGLSARNLIATHPPDGTP 318
Query: 451 TVLRSTGSTRLNLDGSL 501
V STGSTRL GSL
Sbjct: 319 IVFLSTGSTRLKFLGSL 369
>gb|CA923177.1|CA923177 EST640895 MTUS Medicago truncatula cDNA clone MTUS-64B5, mRNA
sequence
Length = 735
Score = 186 bits (400), Expect = 3e-046
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D DP FNLVDPVERNT+GVP+GGWVAIRFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 377 DSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 198
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QKLLPPP+DLPKC*L
Sbjct: 197 LDGKLPNQKLLPPPADLPKC*L 132
Score = 124 bits (265), Expect = 1e-027
Identities = 53/77 (68%), Positives = 58/77 (75%)
Frame = +1 / +1
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGGS+F G PS+T HAILRP +VC SK QCMN TPGLSAR +ATHPP GTP
Sbjct: 139 HLGRSAGGGSNF*FGSFPSNTIHAILRPQLVCTSK*QCMNHTPGLSARNLIATHPPDGTP 318
Query: 451 TVLRSTGSTRLNLDGSL 501
V STGSTRL GSL
Sbjct: 319 IVFLSTGSTRLKFLGSL 369
>gb|CA923196.1|CA923196 EST640914 MTUS Medicago truncatula cDNA clone MTUS-64E1, mRNA
sequence
Length = 788
Score = 183 bits (395), Expect = 1e-045
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D +DP FNLVDPVERNTVGVP+GGWVAIRFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 483 DSNSDPQNFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEIHTSWGLKMAWIV 304
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG LP+QK+LPPP DLPKC*L
Sbjct: 303 LDGKLPNQKVLPPPVDLPKC*L 238
Score = 122 bits (260), Expect = 5e-027
Identities = 53/77 (68%), Positives = 57/77 (74%)
Frame = +1 / +2
Query: 271 HLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAGTP 450
HLG+S GGGS+F G PS T HAILRP +V SK QCMN TPGLSAR +ATHPP GTP
Sbjct: 245 HLGRSTGGGSTF*FGSFPSKTIHAILRPQLVWISK*QCMNHTPGLSARNLIATHPPDGTP 424
Query: 451 TVLRSTGSTRLNLDGSL 501
TV STGSTRL GSL
Sbjct: 425 TVFLSTGSTRLKFCGSL 475
>gb|CB891121.1|CB891121 EST648090 KV3 Medicago truncatula cDNA clone KV3-49A12, mRNA
sequence
Length = 706
Score = 180 bits (388), Expect = 1e-044
Identities = 67/83 (80%), Positives = 73/83 (87%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+KFNLVDPVERNT GVPAGGWVA+RFLADNPGVWFMHCHLE HT+WGL+MAW+V
Sbjct: 497 DPKKDPAKFNLVDPVERNTAGVPAGGWVALRFLADNPGVWFMHCHLEVHTSWGLKMAWIV 318
Query: 329 LDGSLPHQKLLPPPSDLPKC*LD 261
DG +QKL PPPSDLPKC* D
Sbjct: 317 QDGKRRNQKLPPPPSDLPKC*KD 249
Score = 137 bits (293), Expect = 2e-031
Identities = 56/83 (67%), Positives = 62/83 (74%)
Frame = +1 / +1
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
+S QHLG+S+GGG SF R PS T HAI P +VC S+WQCMNQTPGLSAR ATHPP
Sbjct: 247 KSFQHLGRSEGGGGSF*LRRFPSWTIHAIFNPQLVCTSRWQCMNQTPGLSARNLKATHPP 426
Query: 439 AGTPTVLRSTGSTRLNLDGSLTG 507
AGTP V STGST+LNL GS G
Sbjct: 427 AGTPAVFLSTGSTKLNLAGSFLG 495
>gb|CA917739.1|CA917739 EST641886 GPOD Medicago truncatula cDNA clone GPOD-37I21, mRNA
sequence
Length = 762
Score = 180 bits (387), Expect = 2e-044
Identities = 69/82 (84%), Positives = 73/82 (89%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D DP+KFNLVDPVERNTVGVPAGGWVAIRF ADNPGVWFMHCHL+ HT+WGLRMAWLV
Sbjct: 443 DANKDPAKFNLVDPVERNTVGVPAGGWVAIRFFADNPGVWFMHCHLDIHTSWGLRMAWLV 622
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG +QKL PPPSDLPKC*L
Sbjct: 623 LDGPDSNQKLQPPPSDLPKC*L 688
Score = 123 bits (264), Expect = 2e-027
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +1 / -1
Query: 265 NQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAG 444
+QH G+S+GGG SFW PS+T+HAIL P +V S+ QCMN TPGLSA+ MAT PPAG
Sbjct: 687 SQHFGRSEGGG*SFWLESGPSNTSHAILNPQLVWMSR*QCMNHTPGLSAKNLMATQPPAG 508
Query: 445 TPTVLRSTGSTRLNLDGSL 501
TPTV STGST+LN GSL
Sbjct: 507 TPTVFLSTGSTKLNFAGSL 451
>gb|CA917740.1|CA917740 EST641887 GPOD Medicago truncatula cDNA clone GPOD-37I23, mRNA
sequence
Length = 769
Score = 180 bits (387), Expect = 2e-044
Identities = 69/82 (84%), Positives = 73/82 (89%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D DP+KFNLVDPVERNTVGVPAGGWVAIRF ADNPGVWFMHCHL+ HT+WGLRMAWLV
Sbjct: 444 DANKDPAKFNLVDPVERNTVGVPAGGWVAIRFFADNPGVWFMHCHLDIHTSWGLRMAWLV 623
Query: 329 LDGSLPHQKLLPPPSDLPKC*L 264
LDG +QKL PPPSDLPKC*L
Sbjct: 624 LDGPDSNQKLQPPPSDLPKC*L 689
Score = 123 bits (264), Expect = 2e-027
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +1 / -1
Query: 265 NQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAG 444
+QH G+S+GGG SFW PS+T+HAIL P +V S+ QCMN TPGLSA+ MAT PPAG
Sbjct: 688 SQHFGRSEGGG*SFWLESGPSNTSHAILNPQLVWMSR*QCMNHTPGLSAKNLMATQPPAG 509
Query: 445 TPTVLRSTGSTRLNLDGSL 501
TPTV STGST+LN GSL
Sbjct: 508 TPTVFLSTGSTKLNFAGSL 452
>gb|BI263580.1|BI263580 NF086G05PL1F1040 Phosphate starved leaf Medicago truncatula cDNA
clone NF086G05PL 5', mRNA sequence
Length = 585
Score = 169 bits (363), Expect = 3e-041
Identities = 62/78 (79%), Positives = 68/78 (87%)
Frame = -1 / +1
Query: 500 NDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDG 321
+DP+KFNLVDPVERNTV VP+GGWVAIRFLADNPGVW MHCH + H +WGLRMAW+V DG
Sbjct: 22 SDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDG 201
Query: 320 SLPHQKLLPPPSDLPKC* 267
LP QKL PPP DLPKC*
Sbjct: 202 KLPDQKLPPPPKDLPKC* 255
Score = 127 bits (271), Expect = 2e-028
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +1 / -2
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPA 441
S+QHLG+S GGG +F G PSST AIL P + C SKWQC++QTPGLSAR R+AT PP
Sbjct: 260 SDQHLGRSLGGGGNF*SGNFPSSTIQAILNPQLRCTSKWQCISQTPGLSARNRIATQPPE 81
Query: 442 GTPTVLRSTGSTRLNLDGSL 501
GT TV STGSTRLN GSL
Sbjct: 80 GTATVFLSTGSTRLNFAGSL 21
>gb|CA917068.1|CA917068 EST641215 GPOD Medicago truncatula cDNA clone GPOD-35G1, mRNA
sequence
Length = 700
Score = 169 bits (363), Expect = 3e-041
Identities = 62/78 (79%), Positives = 68/78 (87%)
Frame = -1 / -1
Query: 500 NDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDG 321
+DP+KFNLVDPVERNTV VP+GGWVAIRFLADNPGVW MHCH + H +WGLRMAW+V DG
Sbjct: 538 SDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDG 359
Query: 320 SLPHQKLLPPPSDLPKC* 267
LP QKL PPP DLPKC*
Sbjct: 358 KLPDQKLPPPPKDLPKC* 305
Score = 127 bits (271), Expect = 2e-028
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPA 441
S+QHLG+S GGG +F G PSST AIL P + C SKWQC++QTPGLSAR R+AT PP
Sbjct: 300 SDQHLGRSLGGGGNF*SGNFPSSTIQAILNPQLRCTSKWQCISQTPGLSARNRIATQPPE 479
Query: 442 GTPTVLRSTGSTRLNLDGSL 501
GT TV STGSTRLN GSL
Sbjct: 480 GTATVFLSTGSTRLNFAGSL 539
>gb|BI309197.1|BI309197 EST530607 GPOD Medicago truncatula cDNA clone pGPOD-11A15 5' end,
mRNA sequence
Length = 705
Score = 166 bits (358), Expect = 2e-040
Identities = 65/87 (74%), Positives = 70/87 (80%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D ND KFNLVDPVERNTVGVPAGGWVAIRF ADNPGVWFMHCHLE HTTWGL+MA+LV
Sbjct: 577 DSKNDSKKFNLVDPVERNTVGVPAGGWVAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLV 398
Query: 329 LDGSLPHQKLLPPPSDLPKC*LDSSSI 249
+G P Q ++ PP DLPKC* S I
Sbjct: 397 DNGKGPKQSVIAPPKDLPKC*YSSHQI 317
Score = 125 bits (267), Expect = 6e-028
Identities = 53/76 (69%), Positives = 55/76 (72%)
Frame = +1 / +3
Query: 259 ESNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPP 438
E QH G+S GG + G LP ST AI RPHVVC SKWQCMNQTPGLSA MAT PP
Sbjct: 327 EEYQHFGRSLGGAITDCLGPLPLSTKKAIFRPHVVCTSKWQCMNQTPGLSALNLMATQPP 506
Query: 439 AGTPTVLRSTGSTRLN 486
AGTPTV STGSTRLN
Sbjct: 507 AGTPTVFLSTGSTRLN 554
>gb|BG645927.1|BG645927 EST507546 KV3 Medicago truncatula cDNA clone pKV3-48A7 5' end, mRNA
sequence
Length = 574
Score = 164 bits (353), Expect = 8e-040
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D D KFNLVDPVERNTVGVPAGGW AIRF ADNPGVWFMHCHLE HTTWGL+MA++V
Sbjct: 355 DSKKDVKKFNLVDPVERNTVGVPAGGWTAIRFKADNPGVWFMHCHLEIHTTWGLKMAFVV 176
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P++ LLPPPSDLPKC*
Sbjct: 175 DNGKGPNESLLPPPSDLPKC* 113
Score = 105 bits (223), Expect = 7e-022
Identities = 47/74 (63%), Positives = 53/74 (71%)
Frame = +1 / +3
Query: 265 NQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTPGLSARKRMATHPPAG 444
+QHLG+S GGG+ G LP ST +AI PHVV SK QC+N TPGLSA +A PPAG
Sbjct: 111 SQHLGRSLGGGNRDSFGPLPLSTTNAIFSPHVV*ISK*QCINHTPGLSALNLIAVQPPAG 290
Query: 445 TPTVLRSTGSTRLN 486
TPTV STGSTRLN
Sbjct: 291 TPTVFLSTGSTRLN 332
>gb|AW126324.2|AW126324 N100431e rootphos(-) Medicago truncatula cDNA clone MHRP-5H6, mRNA
sequence
Length = 535
Score = 157 bits (337), Expect = 1e-037
Identities = 58/81 (71%), Positives = 66/81 (81%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
DP DP+K+NLVDP+ERNTVGVP GGW AIRF A+NPGVWFMHCHLE HT WGL+ A++V
Sbjct: 98 DPAKDPAKYNLVDPMERNTVGVPTGGWTAIRFTANNPGVWFMHCHLELHTGWGLKTAFVV 277
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
DG Q +LPPP DLPKC*
Sbjct: 278 EDGPGKDQSVLPPPKDLPKC* 340
>gb|AC144514.10| Medicago truncatula clone mth2-12j2, complete sequence
Length = 110255
Score = 92.7 bits (196), Expect(2) = 1e-034
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -1 / -2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVW MHCH + H +WGLRMAW+V DG LP QKL PPP DLPKC*
Sbjct: 40408 GVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 40277
Score = 83.1 bits (175), Expect(2) = 1e-034
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1 / -1
Query: 500 NDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHC 378
+DP+KFNLVDPVERNTV VP+GGWVAIRFLADNPG C
Sbjct: 40751 SDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGDLLWFC 40629
Score = 72.5 bits (152), Expect(2) = 2e-022
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1 / +3
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
S+QHLG+S GGG +F G PSST AIL P + C SKWQC++QTP
Sbjct: 40272 SDQHLGRSLGGGGNF*SGNFPSSTIQAILNPQLRCTSKWQCISQTP 40409
Score = 62.0 bits (129), Expect(2) = 2e-022
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / +1
Query: 388 NQTPGLSARKRMATHPPAGTPTVLRSTGSTRLNLDGSL 501
+++PGLSAR R+AT PP GT TV STGSTRLN GSL
Sbjct: 40639 SKSPGLSARNRIATQPPEGTATVFLSTGSTRLNFAGSL 40752
>gb|AC135467.15| Medicago truncatula clone mth2-34h12, complete sequence
Length = 114945
Score = 92.7 bits (196), Expect(2) = 1e-034
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -1 / +1
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVW MHCH + H +WGLRMAW+V DG LP QKL PPP DLPKC*
Sbjct: 37915 GVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 38046
Score = 83.1 bits (175), Expect(2) = 1e-034
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1 / +3
Query: 500 NDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHC 378
+DP+KFNLVDPVERNTV VP+GGWVAIRFLADNPG C
Sbjct: 37572 SDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGDLLWFC 37694
Score = 72.5 bits (152), Expect(2) = 3e-022
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1 / -2
Query: 262 SNQHLGKSDGGGSSFWCGRLPSSTNHAILRPHVVCASKWQCMNQTP 399
S+QHLG+S GGG +F G PSST AIL P + C SKWQC++QTP
Sbjct: 38051 SDQHLGRSLGGGGNF*SGNFPSSTIQAILNPQLRCTSKWQCISQTP 37914
Score = 62.0 bits (129), Expect(2) = 3e-022
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1 / -3
Query: 388 NQTPGLSARKRMATHPPAGTPTVLRSTGSTRLNLDGSL 501
+++PGLSAR R+AT PP GT TV STGSTRLN GSL
Sbjct: 37684 SKSPGLSARNRIATQPPEGTATVFLSTGSTRLNFAGSL 37571
>emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2-24d7, WORKING DRAFT
SEQUENCE
Length = 116322
Score = 84.9 bits (179), Expect(2) = 6e-032
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / -2
Query: 407 DNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
D+ GVWFMHCHLE HT WGL+ A++V DG Q +LPPP DLPKC*
Sbjct: 62207 DHAGVWFMHCHLELHTGWGLKTAFVVEDGPGKDQSVLPPPKDLPKC* 62067
Score = 83.5 bits (176), Expect(2) = 3e-033
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGV 393
DP DP+K+NLVDP+ERNT+GVP GGW AIRF ADNPG+
Sbjct: 51484 DPAKDPAKYNLVDPIERNTIGVPTGGWTAIRFQADNPGM 51368
Score = 82.2 bits (173), Expect(2) = 6e-032
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGV 393
DP DP+K+NLVDP+ERNTVGVP GGW AIRF A+NPG+
Sbjct: 62528 DPAKDPAKYNLVDPMERNTVGVPTGGWTAIRFTANNPGI 62412
Score = 79.0 bits (166), Expect(2) = 3e-033
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -1 / -3
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
GVWFMHCHLE HT WGL+ A+LV +G Q +LPPP DLP C*
Sbjct: 51277 GVWFMHCHLELHTGWGLKTAFLVENGPNQGQSVLPPPKDLPSC* 51146
>emb|CT033766.1| Medicago truncatula chromosome 5 clone mth4-42c9, WORKING DRAFT SEQUENCE
Length = 235225
Score = 93.6 bits (198), Expect(2) = 4e-033
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1 / -2
Query: 398 GVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC*LD 261
GVWFMHCHLE HTTWGL+MA++V +G P++ LLPPPSDLPKC* D
Sbjct: 168003 GVWFMHCHLEIHTTWGLKMAFVVDNGKGPNESLLPPPSDLPKC*ED 167866
Score = 78.5 bits (165), Expect(2) = 4e-033
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -1 / -1
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPG 396
+P D KFNLVDPVERNTVGVP+GGW AIRF ADNPG
Sbjct: 168625 NPKKDTKKFNLVDPVERNTVGVPSGGWTAIRFRADNPG 168512
>gb|AL376231.1|AL376231 MtBB22B12R1 MtBB Medicago truncatula cDNA clone MtBB22B12 T7, mRNA
sequence
Length = 522
Score = 138 bits (296), Expect = 6e-032
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -1 / +3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP+ FNLVDP RNT+G P GGWVAIRF ADNPG+WF+HCH+++H WGL A LV
Sbjct: 18 NPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGIWFLHCHIDSHLNWGLGTALLV 197
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P Q ++PPP DLP+C*
Sbjct: 198 ENGVGPLQSVIPPPPDLPQC* 260
>gb|CA921793.1|CA921793 EST639511 MTUS Medicago truncatula cDNA clone MTUS-44E1, mRNA
sequence
Length = 763
Score = 138 bits (296), Expect = 6e-032
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -1 / -3
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP+ FNLVDP RNT+G P GGWVAIRF ADNPG+WF+HCH+++H WGL A LV
Sbjct: 485 NPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGIWFLHCHIDSHLNWGLGTALLV 306
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P Q ++PPP DLP+C*
Sbjct: 305 ENGVGPLQSVIPPPPDLPQC* 243
>gb|CB891497.1|CB891497 EST648466 KV3 Medicago truncatula cDNA clone KV3-50D17, mRNA
sequence
Length = 593
Score = 138 bits (296), Expect = 6e-032
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
+P DP+ FNLVDP RNT+G P GGWVAIRF ADNPG+WF+HCH+++H WGL A LV
Sbjct: 388 NPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGIWFLHCHIDSHLNWGLGTALLV 209
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
+G P Q ++PPP DLP+C*
Sbjct: 208 ENGVGPLQSVIPPPPDLPQC* 146
>emb|CT009652.1| Medicago truncatula chromosome 5 clone mth2-124p21, WORKING DRAFT
SEQUENCE
Length = 110957
Score = 75.3 bits (158), Expect(2) = 1e-026
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = -1 / -1
Query: 401 PGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
PG+WF+HCH+++H WGL A LV +G P Q ++PPP DLP+C*
Sbjct: 76160 PGIWFLHCHIDSHLNWGLGTALLVENGVGPLQSVIPPPPDLPQC* 76026
Score = 73.9 bits (155), Expect(2) = 1e-026
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = -1 / -2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMH 381
+P DP+ FNLVDP RNT+G P GGWVAIRF ADNPG+ ++
Sbjct: 76516 NPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGITHLY 76388
>gb|BI309188.1|BI309188 EST530598 GPOD Medicago truncatula cDNA clone pGPOD-10P16 5' end,
mRNA sequence
Length = 471
Score = 120 bits (257), Expect = 1e-026
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = -1 / +3
Query: 431 WVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPKC* 267
WVAIRFLADNPGVW MHCH + H +WGLRMAW+V DG LP QKL PPP DLPKC*
Sbjct: 3 WVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 167
>gb|BI272580.1|BI272580 NF024B08FL1F1064 Developing flower Medicago truncatula cDNA clone
NF024B08FL 5', mRNA sequence
Length = 640
Score = 119 bits (255), Expect = 3e-026
Identities = 47/81 (58%), Positives = 51/81 (62%)
Frame = -1 / +2
Query: 509 DPVNDPSKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLV 330
D D SKFNLVDP RNTV VP GW IRF+ADNPG W +HCHL+ H WGL LV
Sbjct: 293 DAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWILHCHLDVHIGWGLATILLV 472
Query: 329 LDGSLPHQKLLPPPSDLPKC* 267
DG Q + PP DLP C*
Sbjct: 473 XDGVGKLQSIQSPPQDLPIC* 535
>gb|BG649004.1|BG649004 EST510623 HOGA Medicago truncatula cDNA clone pHOGA-24F7 5' end,
mRNA sequence
Length = 509
Score = 105 bits (224), Expect = 5e-022
Identities = 38/63 (60%), Positives = 46/63 (73%)
Frame = -1 / +3
Query: 452 VGVPAGGWVAIRFLADNPGVWFMHCHLEAHTTWGLRMAWLVLDGSLPHQKLLPPPSDLPK 273
V VP GGW AIRF +NPGVWF+HCH++ H WGL A++V +G P L PPP+DLPK
Sbjct: 3 VAVPVGGWAAIRFRTNNPGVWFLHCHVDDHNLWGLVTAFIVENGPTPSTSLGPPPADLPK 182
Query: 272 C*L 264
C*L
Sbjct: 183 C*L 191
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 457,600,035
Number of Sequences: 392609
Number of extensions: 5325667
Number of successful extensions: 69080
Number of sequences better than 1.0e-020: 27
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 14666582264
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)