TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 44956.2.1
(1252 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF649017.1|BF649017 NF051F10EC1F1089 Elicited cell cultu... 330 2e-091
gb|CA919067.1|CA919067 EST636785 MTUS Medicago truncatula c... 245 5e-071
gb|CF068383.1|CF068383 EST669104 MTUS Medicago truncatula c... 235 1e-060
gb|AW267848.1|AW267848 EST306126 DSIR Medicago truncatula c... 155 1e-036
emb|CR343497.1| mte1-76P3FM1 BAC end, cultivar Jemalong A17... 84 1e-034
gb|BF636155.1|BF636155 NF077G06DT1F1051 Drought Medicago tr... 142 1e-032
gb|AA660949.1|AA660949 00846 MtRHE Medicago truncatula cDNA... 133 4e-030
gb|BF637006.1|BF637006 NF074C05LF1F1035 Developing leaf Med... 125 1e-027
gb|BF637381.1|BF637381 NF027C12PL1F1088 Phosphate starved l... 118 2e-025
gb|BF642718.1|BF642718 NF070D10IN1F1089 Insect herbivory Me... 117 4e-025
gb|DW019007.1|DW019007 EST1227968 MTY Medicago truncatula c... 90 1e-023
gb|CA990545.1|CA990545 EST644053 GESD Medicago truncatula c... 90 1e-023
gb|AJ497310.1|AJ497310 AJ497310 MTFLOW Medicago truncatula ... 90 1e-023
gb|BG456805.1|BG456805 NF098D03PL1F1028 Phosphate starved l... 90 1e-023
gb|BE205431.1|BE205431 EST398107 KV0 Medicago truncatula cD... 88 6e-023
gb|BF521399.1|BF521399 EST458875 DSIL Medicago truncatula c... 88 6e-023
gb|AW686040.1|AW686040 NF037F07NR1F1000 Nodulated root Medi... 88 6e-023
gb|BE187511.1|BE187511 EST336072 KV0 Medicago truncatula cD... 88 7e-023
>gb|BF649017.1|BF649017 NF051F10EC1F1089 Elicited cell culture Medicago truncatula cDNA
clone NF051F10EC 5', mRNA sequence
Length = 662
Score = 330 bits (715), Expect(2) = 2e-091
Identities = 139/168 (82%), Positives = 154/168 (91%)
Frame = -3 / +1
Query: 707 WGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINI 528
WGTIDVL+NNAGITRD LLMRMKKSQWQ+VIDLNLTGVFL TQAA K+MMK +KG+IINI
Sbjct: 88 WGTIDVLINNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLSTQAAAKIMMKNKKGRIINI 267
Query: 527 ASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEEL 348
+SVVGL GN GQANY+AAKAGVIG TK+VA+EY+SR I VNA+APGFIASDMTA+LG +L
Sbjct: 268 SSVVGLIGNAGQANYAAAKAGVIGLTKSVAKEYSSRGITVNAVAPGFIASDMTAKLGNDL 447
Query: 347 EKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
EKKIL IPLGRYGQPEEVAGLVEFLAL+ AASY+TGQV TIDGGMVM
Sbjct: 448 EKKILEAIPLGRYGQPEEVAGLVEFLALSQAASYITGQVFTIDGGMVM 591
Score = 169 bits (363), Expect = 1e-040
Identities = 72/169 (42%), Positives = 104/169 (61%)
Frame = -2 / +3
Query: 708 MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQH 529
+GN+ C K CR+ R +DE+EE+SVA *S+S+WC +TG DE+ KGK+ QH
Sbjct: 87 LGNH*CIDKQCRNNQRWFIDENEEVSVAGGY*SKSHWCFSFHTGSC*DYDEE*KGKDNQH 266
Query: 528 CICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA 349
I W WQCW S L + S+W K C+G+ Q++ C C C+R+HCI*+DC+ +
Sbjct: 267 FISCWFDWQCWTSQLCCCKSRSNWPDKICCKGIF*QRHHC*CCCSRIHCI*HDCQVRK*P 446
Query: 348 *EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNV 202
*E++ +S+R +WPTR SC + G * L+ WTG ++* R G+V
Sbjct: 447 *EKDFGGNSIRTVWPTRRSCWTSGILGA*SSCQLHHWTGFHH*WRYGDV 593
Score = 166 bits (357), Expect = 7e-040
Identities = 80/169 (47%), Positives = 104/169 (61%)
Frame = +3 / -3
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH+H S+N ++LSS + K QE NF WLAI * N Q+ LK+ S GSH+R
Sbjct: 594 LHHHTSINGENLSSDVTGSLTKRQEFH*SSNFFWLAIPS*WNCLQNLFLKVIS*LGSHVR 415
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
CNE W NSI+ D SA I N FC+ N+S +II L++IA++TN NVD SL + H
Sbjct: 414 CNESWSNSINSDASARIFLCNRFCQANYSCFCSSIIGLSSIANQTNN**NVDYPSLFILH 235
Query: 561 HYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSP 707
H LC K++TS+I IN +LPLR LH HQ +S I+YQ+I SP
Sbjct: 234 HNLSSCLCGKKNTSEI*INNLLPLRLLHSHQ*TISGYSGIVYQYINGSP 88
Score = 133 bits (284), Expect(3) = 2e-054
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +1 / -1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPS+V TCPV+*LAA L A+NST+PATSSGWPY PNG+ KIFF AV+SD
Sbjct: 593 YITIPPSMVKTCPVM*LAA*LSAKNSTSPATSSGWPYRPNGIASKIFFSRSFPNLAVMSD 414
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGA A T++ LL YS AT FV+
Sbjct: 413 AMNPGATALTVMPLLEYSFATDFVR 339
Score = 97.7 bits (207), Expect(3) = 2e-054
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
++PTTD M AACV+RKTPVRFRSITSCH*DFFILIN S VIPALF
Sbjct: 287 IKPTTDEMLIILPFLFFIIILAAACVERKTPVRFRSITSCH*DFFILINKPSLVIPALFI 108
Query: 688 STSIVPHLSRAAF 726
+TS+VP +F
Sbjct: 107 NTSMVPQXIYCSF 69
Score = 28.1 bits (55), Expect(2) = 2e-091
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3 / +2
Query: 788 GGEAITFGGDVSKEA 744
GG+A+T+GGDVS +
Sbjct: 5 GGQALTYGGDVSNRS 49
Score = 23.1 bits (44), Expect(3) = 2e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 754 ETSPPKVIASPP 789
ETSPP V A PP
Sbjct: 39 ETSPPYVRACPP 4
>gb|CA919067.1|CA919067 EST636785 MTUS Medicago truncatula cDNA clone MTUS-7C10, mRNA
sequence
Length = 795
Score = 245 bits (529), Expect(2) = 5e-071
Identities = 104/130 (80%), Positives = 117/130 (90%)
Frame = -3 / -3
Query: 593 FLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNI 414
FL TQAA K+MMK +KG+IINI+SVVGL GN GQANY+AAKAGVIG TK+VA+EY+SR I
Sbjct: 727 FLSTQAAAKIMMKNKKGRIINISSVVGLIGNAGQANYAAAKAGVIGLTKSVAKEYSSRGI 548
Query: 413 NVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQ 234
VNA+APGFIASDMTA+LG +LEKKIL IPLGRYGQPEEVAGLVEFLAL+ AASY+TGQ
Sbjct: 547 TVNAVAPGFIASDMTAKLGNDLEKKILEAIPLGRYGQPEEVAGLVEFLALSQAASYITGQ 368
Query: 233 VLTIDGGMVM 204
V TIDGGMVM
Sbjct: 367 VFTIDGGMVM 338
Score = 133 bits (284), Expect(3) = 3e-040
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +1 / +3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
YITIPPS+V TCPV+*LAA L A+NST+PATSSGWPY PNG+ KIFF AV+SD
Sbjct: 336 YITIPPSMVKTCPVM*LAA*LSAKNSTSPATSSGWPYRPNGIASKIFFSRSFPNLAVMSD 515
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGA A T++ LL YS AT FV+
Sbjct: 516 AMNPGATALTVMPLLEYSFATDFVR 590
Score = 126 bits (269), Expect = 9e-028
Identities = 60/131 (45%), Positives = 78/131 (59%)
Frame = +3 / +2
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
LH+H S+N ++LSS + K QE NF WLAI * N Q+ LK+ S GSH+R
Sbjct: 335 LHHHTSINGENLSSDVTGSLTKRQEFH*SSNFFWLAIPS*WNCLQNLFLKVIS*LGSHVR 514
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLSLFH 560
CNE W NSI+ D SA I N FC+ N+S +II L++IA++TN NVD SL + H
Sbjct: 515 CNESWSNSINSDASARIFLCNRFCQANYSCFCSSIIGLSSIANQTNN**NVDYPSLFILH 694
Query: 561 HYFCCSLCTKE 593
H LC K+
Sbjct: 695 HNLSSCLCGKK 727
Score = 123 bits (264), Expect = 5e-027
Identities = 53/128 (41%), Positives = 77/128 (60%)
Frame = -2 / -2
Query: 585 YTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCE 406
+TG DE+ KGK+ QH I W WQCW S L + S+W K C+G+ Q++ C
Sbjct: 719 HTGSC*DYDEE*KGKDNQHFISCWFDWQCWTSQLCCCKSRSNWPDKICCKGIF*QRHHC* 540
Query: 405 CYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAY 226
C C+R+HCI*+DC+ + *E++ +S+R +WPTR SC + G * L+ WTG +
Sbjct: 539 CCCSRIHCI*HDCQVRK*P*EKDFGGNSIRTVWPTRRSCWTSGILGA*SSCQLHHWTGFH 360
Query: 225 N*RRDGNV 202
+* R G+V
Sbjct: 359 H*WRYGDV 336
Score = 46.0 bits (94), Expect(3) = 3e-040
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +2
Query: 589 RKTPVRFRSITSCH*DFFILIN 654
+KTPVRFRSITS H*DF ILIN
Sbjct: 722 KKTPVRFRSITSLH*DFLILIN 787
Score = 45.5 bits (93), Expect(2) = 5e-071
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -3 / -1
Query: 662 DTLLMRMKKSQWQDVIDLNLTGVF 591
D LLMRM+KSQ ++VIDLNLTGVF
Sbjct: 795 DGLLMRMRKSQCKEVIDLNLTGVF 724
Score = 26.7 bits (52), Expect(3) = 3e-040
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1 / +3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRK 594
++PTTD M AACV+RK
Sbjct: 642 IKPTTDEMLIILPFLFFIIILAAACVERK 728
>gb|CF068383.1|CF068383 EST669104 MTUS Medicago truncatula cDNA clone MTUS-7C10, mRNA
sequence
Length = 813
Score = 235 bits (507), Expect = 1e-060
Identities = 101/152 (66%), Positives = 120/152 (78%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA + +A + K+E+PVV+VTGASR GCKVLVNYARSSKE
Sbjct: 275 TGLRAQVATLAEASTEAVQKVESPVVIVTGASRGIGKAIALALGKAGCKVLVNYARSSKE 454
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AEEVSKEIEA GG+A+T+GGDVS EADV SM+K A+D WGTIDVL+NNAGITRD LLMRM
Sbjct: 455 AEEVSKEIEALGGQALTYGGDVSNEADVNSMIKTAVDAWGTIDVLINNAGITRDGLLMRM 634
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRK 546
KKSQWQ+VIDLNLTGVF TQAA K+MMK ++
Sbjct: 635 KKSQWQEVIDLNLTGVFSFTQAAAKIMMKNKR 730
Score = 200 bits (432), Expect = 3e-050
Identities = 92/142 (64%), Positives = 104/142 (73%)
Frame = +1 / -1
Query: 574 AACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTSASF 753
AACV+ KTPVRFRSITSCH*DFFILIN S VIPALF +TS+VP S A II+ TSAS
Sbjct: 702 AACVKEKTPVRFRSITSCH*DFFILINKPSLVIPALFINTSMVPQASTAVLIIEFTSASL 523
Query: 754 ETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTG 933
ETSPP V A PP ASISLETSSAS +D A* T+TL PA P A A+A PIPL+APVT TTG
Sbjct: 522 ETSPPYVRACPPSASISLETSSASLDDLA*LTKTLQPALPNANAIAFPIPLEAPVTITTG 343
Query: 934 ASSLVASFTIACSTAATWVCTP 999
S+ + A ++ AT P
Sbjct: 342 DSTF*TASVDASASVATCALKP 277
Score = 124 bits (265), Expect = 3e-027
Identities = 61/135 (45%), Positives = 82/135 (60%)
Frame = +3 / -3
Query: 552 LFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHH 731
+ HH LC +++TS+I IN +LPLR LH HQ +S I+YQ+I SP I F+H
Sbjct: 724 ILHHNLSSCLCERKNTSEI*INNLLPLRLLHSHQ*TISGYSGIVYQYINGSPSIYCSFNH 545
Query: 732 RLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRC 911
R++ISF NIS+ SL T C NL G+LFS IV QNLA+CF+ * +C +N S
Sbjct: 544 RVHISFIRNISTIC*SLPTECLNLLGNLFSFLG*SCIVDQNLATCFT*R*RNCFSNTSGS 365
Query: 912 TCNNNNWSFQLGSIF 956
+ NN+N F + F
Sbjct: 364 SGNNHNRRFHFLNCF 320
Score = 117 bits (251), Expect = 3e-025
Identities = 58/135 (42%), Positives = 80/135 (59%)
Frame = -2 / +1
Query: 945 QAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SIWW*GYHLR 766
++G CYR R W NC S SR+QG G+LC +++ *RG Q D* W ++
Sbjct: 331 ESGIAGCDCYRSFQRYWKSNCVSVR*SRLQGFGQLCKIIQGS*RGFQGD*GTRWASSNIW 510
Query: 765 RRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPL 586
RCF S*C +YD + SR +GN+ C K CR+ R +DE+EE+SVA *S+S+WC
Sbjct: 511 WRCF**S*CELYD*NCSRCLGNH*CIDKQCRNNQRWFIDENEEVSVAGGY*SKSHWCFFF 690
Query: 585 YTGCNKSNDEKEKGK 541
+TG DE+ KG+
Sbjct: 691 HTGSC*DYDEE*KGR 735
>gb|AW267848.1|AW267848 EST306126 DSIR Medicago truncatula cDNA clone pDSIR-8C16, mRNA
sequence
Length = 607
Score = 155 bits (333), Expect = 1e-036
Identities = 67/109 (61%), Positives = 82/109 (75%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA + +A + K+E+PVV+VTGASR GCKVLVNYARSSKE
Sbjct: 281 TGLRAQVATLAEASTEAVQKVESPVVIVTGASRGIGKAIALALGKAGCKVLVNYARSSKE 460
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNA 675
AEEVSKEIEA GG+A+T+GGDVS EADV SM+K A+D WGTIDVL+NNA
Sbjct: 461 AEEVSKEIEALGGQALTYGGDVSNEADVNSMIKTAVDAWGTIDVLINNA 607
Score = 134 bits (287), Expect = 3e-030
Identities = 63/108 (58%), Positives = 74/108 (68%)
Frame = +1 / -2
Query: 676 ALFTSTSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRT 855
ALF +TS+VP S A II+ TSAS ETSPP V A PP ASISLETSSAS +D A* T+T
Sbjct: 606 ALFINTSMVPQASTAVLIIEFTSASLETSPPYVRACPPSASISLETSSASLDDLA*LTKT 427
Query: 856 LHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTP 999
L PA P A A+A PIPL+APVT TTG S+ + A ++ AT P
Sbjct: 426 LQPALPNANAIAFPIPLEAPVTITTGDSTF*TASVDASASVATCALKP 283
>emb|CR343497.1| mte1-76P3FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 750
Score = 84.5 bits (178), Expect(3) = 1e-034
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = -3 / -1
Query: 548 KGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINV 408
+G+IINI+SVVGL GN GQANY+AAKAGVIG TK+VA+EY+SR I V
Sbjct: 456 QGRIINISSVVGLIGNAGQANYAAAKAGVIGLTKSVAKEYSSRGITV 316
Score = 63.8 bits (133), Expect(3) = 1e-034
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -3 / -2
Query: 410 VNAIAPGFIASDMTAELGEELEKKILSTIPLG 315
VNA+APGFIASDMTA+LG +LEKKIL IPLG
Sbjct: 239 VNAVAPGFIASDMTAKLGNDLEKKILEAIPLG 144
Score = 38.6 bits (78), Expect(3) = 1e-034
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 335 LSTIPLGRYGQPEEVAGLV 279
+ T+ LGRYGQPEEVAGLV
Sbjct: 77 ICTLNLGRYGQPEEVAGLV 21
>gb|BF636155.1|BF636155 NF077G06DT1F1051 Drought Medicago truncatula cDNA clone NF077G06DT
5', mRNA sequence
Length = 647
Score = 142 bits (304), Expect = 1e-032
Identities = 62/106 (58%), Positives = 77/106 (72%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA + +A + K+E+PVV+VTGASR GCK LVNYARSSKE
Sbjct: 328 TGLRAQVATLAEASTEAVXKVESPVVIVTGASRGIGKAIALALGKAGCKGLVNYARSSKE 507
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLV 684
AEEVSKEIEA GG+A+T+GGDVS EADV SM+K A+ WGTIDVL+
Sbjct: 508 AEEVSKEIEALGGQALTYGGDVSNEADVNSMIKTAVXAWGTIDVLI 645
Score = 125 bits (268), Expect = 1e-027
Identities = 59/106 (55%), Positives = 70/106 (66%)
Frame = +1 / -1
Query: 682 FTSTSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLH 861
F +TS+VP A II+ TSAS ETSPP V A PP ASISLETSSAS +D A* T+ L
Sbjct: 647 FINTSMVPQAXTAVLIIEFTSASLETSPPYVRACPPSASISLETSSASLDDLA*LTKPLQ 468
Query: 862 PAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTP 999
PA P A A+A PIPL+APVT TTG S+ + A ++ AT P
Sbjct: 467 PALPNANAIAFPIPLEAPVTITTGDSTX*TASVDASASVATCALKP 330
>gb|AA660949.1|AA660949 00846 MtRHE Medicago truncatula cDNA 5' similar to
3-oxoacyl-[acyl-carrier-protein] reductase, mRNA sequence
Length = 682
Score = 133 bits (286), Expect = 4e-030
Identities = 57/103 (55%), Positives = 73/103 (70%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA + +A + K+E+PVV+VTGASR CKVLVNYARSSKE
Sbjct: 328 TGLRAQVATLAEASTEAVQKVESPVVIVTGASRGIGKAIALALGKASCKVLVNYARSSKE 507
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTID 693
AEEVSK IEA GG+A+T+GG+VS EADV SM+K A++ WG ID
Sbjct: 508 AEEVSKXIEALGGQALTYGGNVSNEADVNSMIKTAVNAWGXID 636
Score = 111 bits (238), Expect = 2e-023
Identities = 54/102 (52%), Positives = 64/102 (62%)
Frame = +1 / -3
Query: 694 SIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFP 873
S+ P A II+ TSAS ET PP V A PP AS SLETSSAS +D A* T+TL A P
Sbjct: 635 SMXPQAFTAVLIIEXTSASLETFPPYVRACPPSASXSLETSSASLDDLA*LTKTLQLALP 456
Query: 874 RARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTP 999
A A+A PIPL+APVT TTG S+ + A ++ AT P
Sbjct: 455 NANAIAFPIPLEAPVTITTGDSTF*TASVDASASVATCALKP 330
>gb|BF637006.1|BF637006 NF074C05LF1F1035 Developing leaf Medicago truncatula cDNA clone
NF074C05LF 5', mRNA sequence
Length = 549
Score = 125 bits (268), Expect = 1e-027
Identities = 56/95 (58%), Positives = 69/95 (72%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
+G++ VA + +A + K+E+PVV+VTGASR GCKVLVNYARSSKE
Sbjct: 222 TGLRAQVATLAEASTEAVQKVESPVVIVTGASRGIGKAIALALGKAGCKVLVNYARSSKE 401
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAA 717
AEEVSKEIEA GG+A+T+GGDVS EADV SM+K A
Sbjct: 402 AEEVSKEIEALGGQALTYGGDVSNEADVNSMIKTA 506
Score = 117 bits (250), Expect = 4e-025
Identities = 55/94 (58%), Positives = 64/94 (68%)
Frame = +1 / -3
Query: 718 AAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALP 897
A II+ TSAS ETSPP V A PP ASISLETSSAS +D A* T+TL PA P A A+A P
Sbjct: 505 AVLIIEFTSASLETSPPYVRACPPSASISLETSSASLDDLA*LTKTLQPALPNANAIAFP 326
Query: 898 IPLDAPVTTTTGASSLVASFTIACSTAATWVCTP 999
IPL+APVT TTG S+ + A ++ AT P
Sbjct: 325 IPLEAPVTITTGDSTF*TASVDASASVATCALKP 224
>gb|BF637381.1|BF637381 NF027C12PL1F1088 Phosphate starved leaf Medicago truncatula cDNA
clone NF027C12PL 5', mRNA sequence
Length = 260
Score = 118 bits (253), Expect = 2e-025
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = -3 / +1
Query: 602 TGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYAS 423
+ VF ++A + MMKKR G+II I SVVG GN GQANY+AAKAG+IGF+K++ARE AS
Sbjct: 1 SSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVAS 180
Query: 422 RNINVNAIAPGFIASDMTAELGEE 351
R I VN +APGFI +DMT L ++
Sbjct: 181 RGITVNVVAPGFIETDMTRALSDD 252
>gb|BF642718.1|BF642718 NF070D10IN1F1089 Insect herbivory Medicago truncatula cDNA clone
NF070D10IN 5', mRNA sequence
Length = 569
Score = 117 bits (250), Expect = 4e-025
Identities = 52/119 (43%), Positives = 73/119 (61%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCT 582
D + + E ++K ALD +G ID+L+NNAGI RD +M W + ++L G F T
Sbjct: 211 DYNNVVEGEKIIKTALDNFGRIDILINNAGILRDRSFTKMSDQDWDLIHLVHLKGAFKTT 390
Query: 581 QAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVN 405
AA + K++ G++I +S G+ GN GQANYSAAK G++G T T+A E A NI VN
Sbjct: 391 HAAWEHFRKQKYGRVIMTSSNAGIFGNFGQANYSAAKMGLVGLTNTLAIEGAXYNIXVN 567
>gb|DW019007.1|DW019007 EST1227968 MTY Medicago truncatula cDNA clone MTYBD70, mRNA
sequence
Length = 755
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = -3 / +2
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S++Q+VID+NLTGVFL T+ A +VM R+G IIN ASV G G V Y+
Sbjct: 371 TNILENKLSEFQEVIDINLTGVFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYT 550
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G K A E I VN ++P + + +
Sbjct: 551 SSKHAVVGLMKNTAIELGPYGIRVNCVSPYVVGTPL 658
Score = 42.8 bits (87), Expect(2) = 1e-023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3 / +2
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K G +D++ NNAGIT
Sbjct: 263 DVTKEKDIENAVNTTVSKHGKLDIMFNNAGIT 358
>gb|CA990545.1|CA990545 EST644053 GESD Medicago truncatula cDNA clone GESD-29E9, mRNA
sequence
Length = 718
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = -3 / +1
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S++Q+VID+NLTGVFL T+ A +VM R+G IIN ASV G G V Y+
Sbjct: 199 TNILENKLSEFQEVIDINLTGVFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYT 378
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G K A E I VN ++P + + +
Sbjct: 379 SSKHAVVGLMKNTAIELGPYGIRVNCVSPYVVGTPL 486
Score = 42.8 bits (87), Expect(2) = 1e-023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K G +D++ NNAGIT
Sbjct: 91 DVTKEKDIENAVNTTVSKHGKLDIMFNNAGIT 186
>gb|AJ497310.1|AJ497310 AJ497310 MTFLOW Medicago truncatula cDNA clone mt--abc955107f08,
mRNA sequence
Length = 715
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = -3 / +2
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S++Q+VID+NLTGVFL T+ A +VM R+G IIN ASV G G V Y+
Sbjct: 167 TNILENKLSEFQEVIDINLTGVFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYT 346
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G K A E I VN ++P + + +
Sbjct: 347 SSKHAVVGLMKNTAIELGPYGIRVNCVSPYVVGTPL 454
Score = 42.8 bits (87), Expect(2) = 1e-023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3 / +2
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K G +D++ NNAGIT
Sbjct: 59 DVTKEKDIENAVNTTVSKHGKLDIMFNNAGIT 154
>gb|BG456805.1|BG456805 NF098D03PL1F1028 Phosphate starved leaf Medicago truncatula cDNA
clone NF098D03PL 5', mRNA sequence
Length = 682
Score = 89.5 bits (189), Expect(2) = 1e-023
Identities = 40/96 (41%), Positives = 58/96 (60%)
Frame = -3 / +1
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S++Q+VID+NLTGVFL T+ A +VM R+G IIN ASV G G V Y+
Sbjct: 355 TNILENKLSEFQEVIDINLTGVFLGTKHAARVMTPVRRGSIINTASVCGCIGGVASHAYT 534
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G K A E I VN ++P + + +
Sbjct: 535 SSKHAVVGLMKNTAIELGPYGIRVNCVSPYVVGTPL 642
Score = 42.8 bits (87), Expect(2) = 1e-023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K G +D++ NNAGIT
Sbjct: 247 DVTKEKDIENAVNTTVSKHGKLDIMFNNAGIT 342
>gb|BE205431.1|BE205431 EST398107 KV0 Medicago truncatula cDNA clone pKV0-21J9, mRNA
sequence
Length = 686
Score = 88.1 bits (186), Expect(2) = 6e-023
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = -3 / +3
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S+++DVI +NLTGVFL T+ A +VM+ R+G IIN ASV G G Y+
Sbjct: 246 TKILENKLSEFEDVIKVNLTGVFLGTKHAARVMIPARRGSIINTASVGGSIGGCAPHAYT 425
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G + A E I VN ++P F+A+ M
Sbjct: 426 SSKHAVVGLMRNTAIELGPFGIRVNCVSPYFLATPM 533
Score = 41.4 bits (84), Expect(2) = 6e-023
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -3 / +3
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K+G +D++ NNAGI+
Sbjct: 138 DVTKEEDIENAVNTTVFKYGKLDIMFNNAGIS 233
>gb|BF521399.1|BF521399 EST458875 DSIL Medicago truncatula cDNA clone pDSIL-43C22, mRNA
sequence
Length = 681
Score = 88.1 bits (186), Expect(2) = 6e-023
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = -3 / +1
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S+++DVI +NLTGVFL T+ A +VM+ R+G IIN ASV G G Y+
Sbjct: 259 TKILENKLSEFEDVIKVNLTGVFLGTKHAARVMIPARRGSIINTASVGGSIGGCAPHAYT 438
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G + A E I VN ++P F+A+ M
Sbjct: 439 SSKHAVVGLMRNTAIELGPFGIRVNCVSPYFLATPM 546
Score = 41.4 bits (84), Expect(2) = 6e-023
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K+G +D++ NNAGI+
Sbjct: 151 DVTKEEDIENAVNTTVFKYGKLDIMFNNAGIS 246
>gb|AW686040.1|AW686040 NF037F07NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF037F07NR 5', mRNA sequence
Length = 655
Score = 88.1 bits (186), Expect(2) = 6e-023
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = -3 / +3
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S+++DVI +NLTGVFL T+ A +VM+ R+G IIN ASV G G Y+
Sbjct: 339 TKILENKLSEFEDVIKVNLTGVFLGTKHAARVMIPARRGSIINTASVGGSIGGCAPHAYT 518
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G + A E I VN ++P F+A+ M
Sbjct: 519 SSKHAVVGLMRNTAIELGPFGIRVNCVSPYFLATPM 626
Score = 41.4 bits (84), Expect(2) = 6e-023
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -3 / +3
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K+G +D++ NNAGI+
Sbjct: 231 DVTKEEDIENAVNTTVFKYGKLDIMFNNAGIS 326
>gb|BE187511.1|BE187511 EST336072 KV0 Medicago truncatula cDNA clone pKV0-10C19, mRNA
sequence
Length = 585
Score = 88.1 bits (186), Expect(2) = 7e-023
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = -3 / +1
Query: 659 TLLMRMKKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYS 480
T ++ K S+++DVI +NLTGVFL T+ A +VM+ R+G IIN ASV G G Y+
Sbjct: 226 TKILENKLSEFEDVIKVNLTGVFLGTKHAARVMIPARRGSIINTASVGGSIGGCAPHAYT 405
Query: 479 AAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDM 372
++K V+G + A E I VN ++P F+A+ M
Sbjct: 406 SSKHAVVGLMRNTAIELGPFGIRVNCVSPYFLATPM 513
Score = 41.4 bits (84), Expect(2) = 7e-023
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGIT 666
DV+KE D+E+ + + K+G +D++ NNAGI+
Sbjct: 118 DVTKEEDIENAVNTTVFKYGKLDIMFNNAGIS 213
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,116,315,133
Number of Sequences: 392609
Number of extensions: 16907530
Number of successful extensions: 73186
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 45092961720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)