TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829517.2.1
(913 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DW016181.1|DW016181 EST1225142 MTY Medicago truncatula c... 144 7e-073
gb|DW016717.1|DW016717 EST1225678 MTY Medicago truncatula c... 144 2e-071
gb|BE204101.1|BE204101 EST396777 KV0 Medicago truncatula cD... 140 3e-067
gb|CX542193.1|CX542193 s13dNF86D05GS043_467694 Germinating ... 144 1e-054
gb|BE998897.1|BE998897 EST430620 GVSN Medicago truncatula c... 144 2e-054
gb|CB894949.1|CB894949 EST647741 HOGA Medicago truncatula c... 87 3e-053
gb|BI270339.1|BI270339 NF010A11FL1F1085 Developing flower M... 96 1e-052
gb|BQ138556.1|BQ138556 NF004F03PH1F1029 Phoma-infected Medi... 144 3e-052
gb|BF641901.1|BF641901 NF057H07IN1F1063 Insect herbivory Me... 96 9e-047
gb|BQ141044.1|BQ141044 NF058B09PH1F1077 Phoma-infected Medi... 144 1e-033
gb|BF645166.1|BF645166 NF030E11EC1F1086 Elicited cell cultu... 138 1e-031
>gb|DW016181.1|DW016181 EST1225142 MTY Medicago truncatula cDNA clone MTYAE09, mRNA
sequence
Length = 807
Score = 144 bits (310), Expect(4) = 7e-073
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +2
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 122 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 301
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 302 AVIFDSFAIIMYLEDKFPQ 358
Score = 94.5 bits (200), Expect(3) = 2e-028
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -3 / -1
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLS SG DCSP R TAL S PLRLRA+R
Sbjct: 348 LSSKYMIMAKESKITAGPSTRTGTKPTGLSWRKSG*DCSPFNRLTAL*SYLRPLRLRAIR 169
Query: 74 ARWEHELRQYEYSIS 30
R EHEL QYEY I+
Sbjct: 168 TRKEHELLQYEYRIN 124
Score = 90.4 bits (191), Expect(4) = 7e-073
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +1 / +2
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q SIV+S IQPLHNL +L++++ KVG E + W Q I++GFTA+
Sbjct: 365 PLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYVEGKVGPDEKLPWVQNVIKKGFTAL 544
Query: 448 ENLIQ 462
E L++
Sbjct: 545 EKLLK 559
Score = 72.5 bits (152), Expect(4) = 7e-073
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPA 624
LK G+YATGDEV +AD+FLAPQ++AA +R I M+ +P L+RLH Y+ P+
Sbjct: 554 LKEHTGRYATGDEVFMADIFLAPQLHAASKRFNIHMNEFPILSRLHETYL*DPS 715
Score = 37.7 bits (76), Expect(3) = 2e-028
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATML 318
FS AVKP I H + S PTF S RL RG I E T+L
Sbjct: 549 FSRAVKPFFITFWTHGSFSSGPTFPSTYFRRFRL*RGCIDEETIL 415
Score = 33.1 bits (66), Expect(3) = 2e-028
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 530 GARNTSASWTSSPVAYFPAHPFS 462
GA+N SA TSSPVAY P F+
Sbjct: 621 GAKNISAMKTSSPVAYLPVCSFN 553
Score = 25.8 bits (50), Expect(4) = 7e-073
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 619 PAFEAALPGKQPDA 660
PAF ALP QPDA
Sbjct: 711 PAFRDALPENQPDA 752
>gb|DW016717.1|DW016717 EST1225678 MTY Medicago truncatula cDNA clone MTYAK74, mRNA
sequence
Length = 865
Score = 144 bits (310), Expect(3) = 2e-071
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +1
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 37 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 216
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 217 AVIFDSFAIIMYLEDKFPQ 273
Score = 94.5 bits (200), Expect(3) = 1e-023
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -3 / -3
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLS SG DCSP R TAL S PLRLRA+R
Sbjct: 263 LSSKYMIMAKESKITAGPSTRTGTKPTGLSWRKSG*DCSPFNRLTAL*SYLRPLRLRAIR 84
Query: 74 ARWEHELRQYEYSIS 30
R EHEL QYEY I+
Sbjct: 83 TRKEHELLQYEYRIN 39
Score = 91.3 bits (193), Expect(3) = 2e-071
Identities = 38/66 (57%), Positives = 47/66 (71%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK G+YATGDEV +AD+FLAPQ++AA +R I M+ +P L+RLH Y PAF ALP
Sbjct: 470 LKEHTGRYATGDEVFMADIFLAPQLHAASKRFNIHMNEFPILSRLHETYYEIPAFRDALP 649
Query: 643 GKQPDA 660
QPDA
Sbjct: 650 ENQPDA 667
Score = 74.4 bits (156), Expect(3) = 2e-071
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIER 432
PLLP D+ K+A+N Q SIV+S IQPLHNL +L++++ KVG E + W Q I++
Sbjct: 280 PLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYVEGKVGPDEKLPWVQNVIKK 444
Score = 33.1 bits (66), Expect(3) = 1e-023
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 530 GARNTSASWTSSPVAYFPAHPFS 462
GA+N SA TSSPVAY P F+
Sbjct: 537 GAKNISAMKTSSPVAYLPVCSFN 469
Score = 25.8 bits (50), Expect(3) = 1e-023
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3 / -2
Query: 659 ASGCLPGSAASNAGCDMYSEWSLARVG 579
ASG G A+ NAG Y +L R+G
Sbjct: 666 ASG*FSGKASRNAGIS*YVSCNLDRIG 586
>gb|BE204101.1|BE204101 EST396777 KV0 Medicago truncatula cDNA clone pKV0-14B15, mRNA
sequence
Length = 642
Score = 140 bits (301), Expect(3) = 3e-067
Identities = 54/82 (65%), Positives = 70/82 (85%)
Frame = +1 / +1
Query: 19 TVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALV 198
++ +L++YSYWRSSC+ R RIALNLKG+ YEYKAV+L KGEQ P+F+KLNP+ FVP LV
Sbjct: 70 SISKLIVYSYWRSSCAFRVRIALNLKGLKYEYKAVDLFKGEQYHPDFLKLNPVGFVPVLV 249
Query: 199 DGSSVIGDSYAITLYLEDKYPE 264
DG +VI DS+AI +YLEDK+P+
Sbjct: 250 DGPAVIFDSFAIIMYLEDKFPQ 315
Score = 97.3 bits (206), Expect(2) = 2e-025
Identities = 47/75 (62%), Positives = 52/75 (69%)
Frame = -3 / -2
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLSL SG CSPL+R TALYS PLR RA+R
Sbjct: 305 LSSKYIIMAKESKITAGPSTRTGTKPTGLSLRKSG*YCSPLKRSTALYSYLRPLRFRAIR 126
Query: 74 ARWEHELRQYEYSIS 30
R HEL QYEY+IS
Sbjct: 125 TRKAHELLQYEYTIS 81
Score = 86.8 bits (183), Expect(3) = 3e-067
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q+ SIV+S IQPL NL L++I++KV E + W Q I +GFTA+
Sbjct: 322 PLLPTDIHKRAINFQVVSIVSSSIQPLQNLNTLKYIEKKVSPDEKLPWVQSVIRKGFTAL 501
Query: 448 ENLIQ 462
E L++
Sbjct: 502 EKLLK 516
Score = 68.9 bits (144), Expect(3) = 3e-067
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLAR 594
LK AGKYATGDEV +AD+FLAPQ+ AA +R IDM+ +PTL+R
Sbjct: 511 LKEHAGKYATGDEVFMADIFLAPQLDAASKRFNIDMNEFPTLSR 642
Score = 42.3 bits (86), Expect(2) = 2e-025
Identities = 25/44 (56%), Positives = 28/44 (63%)
Frame = -3 / -2
Query: 593 LARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFS 462
L RVG MS+L AA GA+N SA TSSPVAYFPA F+
Sbjct: 641 LDRVGNSFMSMLNLLEAASN*GAKNISAMKTSSPVAYFPACSFN 510
>gb|CX542193.1|CX542193 s13dNF86D05GS043_467694 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 552
Score = 144 bits (310), Expect(2) = 1e-054
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +3
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 105 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 284
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 285 AVIFDSFAIIMYLEDKFPQ 341
Score = 94.5 bits (200), Expect(2) = 7e-024
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -3 / -3
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLS SG DCSP R TAL S PLRLRA+R
Sbjct: 331 LSSKYMIMAKESKITAGPSTRTGTKPTGLSWRKSG*DCSPFNRLTAL*SYLRPLRLRAIR 152
Query: 74 ARWEHELRQYEYSIS 30
R EHEL QYEY I+
Sbjct: 151 TRKEHELLQYEYRIN 107
Score = 90.4 bits (191), Expect(2) = 1e-054
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = +1 / +3
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q SIV+S IQPLHNL +L++++ KVG E + W Q I++GFTA+
Sbjct: 348 PLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYVEGKVGPDEKLPWVQNVIKKGFTAL 527
Query: 448 ENLIQ 462
E L++
Sbjct: 528 EKLLK 542
Score = 37.7 bits (76), Expect(2) = 7e-024
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = -3 / -3
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATML 318
FS AVKP I H + S PTF S RL RG I E T+L
Sbjct: 532 FSRAVKPFFITFWTHGSFSSGPTFPSTYFRRFRL*RGCIDEETIL 398
>gb|BE998897.1|BE998897 EST430620 GVSN Medicago truncatula cDNA clone pGVSN-13M18, mRNA
sequence
Length = 484
Score = 144 bits (310), Expect(2) = 2e-054
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +1
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 37 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 216
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 217 AVIFDSFAIIMYLEDKFPQ 273
Score = 94.5 bits (200), Expect(2) = 7e-024
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -3 / -3
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLS SG DCSP R TAL S PLRLRA+R
Sbjct: 263 LSSKYMIMAKESKITAGPSTRTGTKPTGLSWRKSG*DCSPFNRLTAL*SYLRPLRLRAIR 84
Query: 74 ARWEHELRQYEYSIS 30
R EHEL QYEY I+
Sbjct: 83 TRKEHELLQYEYRIN 39
Score = 90.0 bits (190), Expect(2) = 2e-054
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q SIV+S IQPLHNL +L++++ KVG E + W Q I++GFTA+
Sbjct: 280 PLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYVEGKVGPDEKLPWVQNVIKKGFTAL 459
Query: 448 ENLIQ 462
E L +
Sbjct: 460 EKLFE 474
Score = 37.7 bits (76), Expect(2) = 7e-024
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = -3 / -3
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATML 318
FS AVKP I H + S PTF S RL RG I E T+L
Sbjct: 464 FSRAVKPFFITFWTHGSFSSGPTFPSTYFRRFRL*RGCIDEETIL 330
>gb|CB894949.1|CB894949 EST647741 HOGA Medicago truncatula cDNA clone HOGA-33C19, mRNA
sequence
Length = 509
Score = 87.2 bits (184), Expect(3) = 3e-053
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATGDEV +AD+FLAPQ+ AA +R IDM+ +PTL+RLH Y PAF LP
Sbjct: 328 LKEHAGKYATGDEVFMADIFLAPQLDAASKRFNIDMNEFPTLSRLHETYNEIPAFRETLP 507
Score = 86.8 bits (183), Expect(3) = 3e-053
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q+ SIV+S IQPL NL L++I++KV E + W Q I +GFTA+
Sbjct: 139 PLLPTDIHKRAINFQVVSIVSSSIQPLQNLNTLKYIEKKVSPDEKLPWVQSVIRKGFTAL 318
Query: 448 ENLIQ 462
E L++
Sbjct: 319 EKLLK 333
Score = 75.3 bits (158), Expect(3) = 3e-053
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +1 / +1
Query: 133 KGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPE 264
KGEQ P+F+KLNP+ FVP LVDG +VI DS+AI +YLEDK+P+
Sbjct: 1 KGEQYHPDFLKLNPVGFVPVLVDGPAVIFDSFAIIMYLEDKFPQ 132
>gb|BI270339.1|BI270339 NF010A11FL1F1085 Developing flower Medicago truncatula cDNA clone
NF010A11FL 5', mRNA sequence
Length = 640
Score = 96.4 bits (204), Expect(3) = 1e-052
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATGDEV +AD+FLAPQ+ AA +R IDM+ +PTL+RLH Y PAF LP
Sbjct: 310 LKEHAGKYATGDEVFMADIFLAPQLDAASKRFNIDMNEFPTLSRLHETYNEIPAFRETLP 489
Query: 643 GKQPDA 660
QPDA
Sbjct: 490 ENQPDA 507
Score = 86.8 bits (183), Expect(3) = 1e-052
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q+ SIV+S IQPL NL L++I++KV E + W Q I +GFTA+
Sbjct: 121 PLLPTDIHKRAINFQVVSIVSSSIQPLQNLNTLKYIEKKVSPDEKLPWVQSVIRKGFTAL 300
Query: 448 ENLIQ 462
E L++
Sbjct: 301 EKLLK 315
Score = 63.8 bits (133), Expect(3) = 1e-052
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +1 / +1
Query: 154 EFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPE 264
+F+KLNP+ FVP LVDG +VI DS+AI +YLEDK+P+
Sbjct: 4 DFLKLNPVGFVPVLVDGPAVIFDSFAIIMYLEDKFPQ 114
>gb|BQ138556.1|BQ138556 NF004F03PH1F1029 Phoma-infected Medicago truncatula cDNA clone
NF004F03PH 5', mRNA sequence
Length = 648
Score = 144 bits (310), Expect(2) = 3e-052
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +2
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 107 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 286
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 287 AVIFDSFAIIMYLEDKFPQ 343
Score = 94.5 bits (200), Expect(2) = 2e-022
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = -3 / -1
Query: 254 LSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAMR 75
LSSKY ++A ES IT PST GT GLS SG DCSP R TAL S PLRLRA+R
Sbjct: 333 LSSKYMIMAKESKITAGPSTRTGTKPTGLSWRKSG*DCSPFNRLTAL*SYLRPLRLRAIR 154
Query: 74 ARWEHELRQYEYSIS 30
R EHEL QYEY I+
Sbjct: 153 TRKEHELLQYEYRIN 109
Score = 82.6 bits (174), Expect(2) = 3e-052
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1 / +2
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q SIV+S IQPLHNL +L++++ KVG E + W Q I++GFT
Sbjct: 350 PLLPTDIHKRAINFQAVSIVSSSIQPLHNLNLLKYVEGKVGPDEKLPWVQNVIKKGFTGE 529
Query: 448 ENLI 459
LI
Sbjct: 530 IXLI 541
Score = 32.7 bits (65), Expect(2) = 2e-022
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -3 / -1
Query: 440 VKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATML 318
VKP I H + S PTF S RL RG I E T+L
Sbjct: 522 VKPFFITFWTHGSFSSGPTFPSTYFRRFRL*RGCIDEETIL 400
>gb|BF641901.1|BF641901 NF057H07IN1F1063 Insect herbivory Medicago truncatula cDNA clone
NF057H07IN 5', mRNA sequence
Length = 675
Score = 95.9 bits (203), Expect(4) = 9e-047
Identities = 37/53 (69%), Positives = 47/53 (88%)
Frame = +1 / +1
Query: 106 YEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDKYPE 264
Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG +VI DS+AI +YLEDK+P+
Sbjct: 241 YDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGPAVIFDSFAIIMYLEDKFPQ 399
Score = 78.5 bits (165), Expect(4) = 9e-047
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1 / +1
Query: 268 PLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAI 447
PLLP D+ K+A+N Q SIV+S IQPL N + L +I +KVG E + W + I +GFTA+
Sbjct: 406 PLLPTDIHKRAINFQAVSIVSSSIQPLQNHSFLMYIQKKVGLDEKLPWA*RVIRKGFTAL 585
Query: 448 ENLIQ 462
E L++
Sbjct: 586 EKLLK 600
Score = 48.3 bits (99), Expect(4) = 9e-047
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 25 GRLMLYSYWRSSCSHRARIALNLK 96
G+ LYSYWRSSCS R RIALNLK
Sbjct: 169 GKRNLYSYWRSSCSFRVRIALNLK 240
Score = 22.6 bits (43), Expect(4) = 9e-047
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 562 IDMSNYPTLARLH 600
+ M+ +PTL+RLH
Sbjct: 633 VFMNEFPTLSRLH 671
>gb|BQ141044.1|BQ141044 NF058B09PH1F1077 Phoma-infected Medicago truncatula cDNA clone
NF058B09PH 5', mRNA sequence
Length = 373
Score = 144 bits (310), Expect = 1e-033
Identities = 57/79 (72%), Positives = 70/79 (88%)
Frame = +1 / +2
Query: 28 RLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGS 207
+L+LYSYWRSSCS R RIALNLKG+ Y+YKAVNLLKGEQS P+F++LNP+ FVP LVDG
Sbjct: 107 QLILYSYWRSSCSFRVRIALNLKGLKYDYKAVNLLKGEQSHPDFLQLNPVGFVPVLVDGP 286
Query: 208 SVIGDSYAITLYLEDKYPE 264
+VI DS+AI +YLEDK+P+
Sbjct: 287 AVIFDSFAIIMYLEDKFPQ 343
>gb|BF645166.1|BF645166 NF030E11EC1F1086 Elicited cell culture Medicago truncatula cDNA
clone NF030E11EC 5', mRNA sequence
Length = 495
Score = 138 bits (296), Expect = 1e-031
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = +1 / +3
Query: 19 TVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALV 198
++ +L+LYSYWRSSC+ R RIALNLKG+ YEYKAV+L KGEQ P+F+KLNP+ FVP LV
Sbjct: 204 SISKLILYSYWRSSCAFRVRIALNLKGLKYEYKAVDLFKGEQYHPDFLKLNPVGFVPVLV 383
Query: 199 DGSSVIGDSYAITLYLEDKYPE 264
DG +VI DS+AI +YLEDK+ +
Sbjct: 384 DGPAVIFDSFAIIMYLEDKFAQ 449
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 870,483,991
Number of Sequences: 392609
Number of extensions: 12687873
Number of successful extensions: 93285
Number of sequences better than 1.0e-020: 14
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 31161407328
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)