TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3713074.2.1
(527 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved l... 111 8e-024
gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cD... 110 2e-023
gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula... 110 2e-023
gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula... 110 2e-023
gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cD... 110 2e-023
gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula c... 110 2e-023
gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower M... 110 2e-023
gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula ... 110 2e-023
gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cD... 110 2e-023
gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula c... 110 2e-023
gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula c... 110 2e-023
gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula c... 110 2e-023
gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cD... 110 2e-023
gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula c... 110 2e-023
gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infect... 110 2e-023
gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infect... 110 2e-023
gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infect... 110 2e-023
gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infect... 110 2e-023
gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infect... 110 2e-023
gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infect... 110 2e-023
gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula c... 103 2e-021
gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula c... 103 3e-021
>gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved leaf Medicago truncatula cDNA
clone NF099B09PL 5', mRNA sequence
Length = 683
Score = 111 bits (237), Expect = 8e-024
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 489 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLXDENNFSADGLQSLTNNLCY 656
>gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cDNA clone pKV0-18L21, mRNA
sequence
Length = 603
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 189 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 356
>gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula cDNA clone MtBC29E08 T3, mRNA
sequence
Length = 454
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 140 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 307
>gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula cDNA clone MtBC51C02 T3, mRNA
sequence
Length = 491
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 140 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 307
>gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cDNA clone pKV1-13L5, mRNA
sequence
Length = 601
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 269 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 436
>gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula cDNA clone pHOGA-19F10 5' end,
mRNA sequence
Length = 832
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 531 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 698
>gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF011C12FL 5', mRNA sequence
Length = 691
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 156 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 323
>gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula cDNA clone pGESD17C13 5' end,
mRNA sequence
Length = 741
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +1
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 406 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 573
>gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cDNA clone pKV2-52F5, mRNA
sequence
Length = 796
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 323 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 490
>gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula cDNA clone mtgmadc120018e05,
mRNA sequence
Length = 604
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 213 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 380
>gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula cDNA clone pGLSD-42J7, mRNA
sequence
Length = 647
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 150 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 317
>gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula cDNA clone GESD-32N10, mRNA
sequence
Length = 657
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +1
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 94 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 261
>gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cDNA clone KV3-53J20, mRNA
sequence
Length = 852
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 186 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 353
>gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula cDNA clone HOGA-26O13, mRNA
sequence
Length = 776
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +1
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 454 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 621
>gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +1
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 127 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 294
>gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 598
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 17 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 184
>gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 579
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 17 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 184
>gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 472
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +3
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 75 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 242
>gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 545
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 17 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 184
>gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 471
Score = 110 bits (235), Expect = 2e-023
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 17 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 184
>gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula cDNA clone MTUS-32A1, mRNA
sequence
Length = 743
Score = 103 bits (220), Expect = 2e-021
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +1 / -1
Query: 19 VDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNLCY 177
VD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NLCY
Sbjct: 617 VDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCY 459
>gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula cDNA clone HOGA-33N16, mRNA
sequence
Length = 892
Score = 103 bits (219), Expect = 3e-021
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 10 GTVVDNNICHPTEFDFFVCIHARAKGTSRPTHYHVLRDDNKFTADALQSLTYNL 171
GTVVD+ ICHPTEFDF++C HA +GTSRP HYHVL D+N F+AD LQSLT NL
Sbjct: 730 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNL 891
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 575,333,502
Number of Sequences: 392609
Number of extensions: 7946437
Number of successful extensions: 50168
Number of sequences better than 1.0e-020: 24
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 15425198588
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)