TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3712967.2.1
(571 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB891989.1|CB891989 EST648958 KV3 Medicago truncatula cD... 121 1e-026
gb|AC153005.13| Medicago truncatula clone mth2-103l24, WORK... 120 2e-026
gb|AC174141.1| Medicago truncatula clone mth2-165i11, WORKI... 120 2e-026
gb|CG944751.1|CG944751 MBEKJ71TF mth2 Medicago truncatula g... 119 4e-026
gb|BE205420.1|BE205420 EST398096 KV0 Medicago truncatula cD... 118 6e-026
gb|BF649117.1|BF649117 NF055G07EC1F1054 Elicited cell cultu... 118 6e-026
gb|BQ165798.1|BQ165798 EST611667 KVKC Medicago truncatula c... 118 6e-026
gb|CB065548.1|CB065548 EST645229 HOGA Medicago truncatula c... 118 6e-026
gb|CA919984.1|CA919984 EST637702 MTUS Medicago truncatula c... 118 6e-026
gb|AL371059.1|AL371059 MtBA41F03R1 MtBA Medicago truncatula... 117 1e-025
emb|CR491820.1| mth2-165I18RM1 BAC end, cultivar Jemalong A... 116 3e-025
gb|BQ156448.1|BQ156448 NF093A06IR1F1049 Irradiated Medicago... 113 2e-024
gb|AC136288.23| Medicago truncatula clone mth2-13o7, comple... 112 5e-024
gb|AC134522.9| Medicago truncatula clone mth2-12g4, complet... 112 5e-024
emb|CR323217.1| mte1-5N2RM1 BAC end, cultivar Jemalong A17 ... 96 9e-023
gb|AC155891.2| Medicago truncatula chromosome 2 BAC clone m... 107 1e-022
gb|AC150205.5| Medicago truncatula clone mth2-72l17, comple... 95 3e-022
gb|AC135462.21| Medicago truncatula clone mth2-35o17, compl... 95 3e-022
emb|CR347196.1| mte1-80P20RM1 BAC end, cultivar Jemalong A1... 95 3e-022
emb|CR322859.1| mte1-5M2RM1 BAC end, cultivar Jemalong A17 ... 94 4e-022
gb|CB893504.1|CB893504 EST646296 HOGA Medicago truncatula c... 90 2e-021
gb|BG647723.1|BG647723 EST509342 HOGA Medicago truncatula c... 90 2e-021
gb|BG648898.1|BG648898 EST510517 HOGA Medicago truncatula c... 90 2e-021
gb|CB893287.1|CB893287 EST646079 HOGA Medicago truncatula c... 90 2e-021
gb|CB891587.1|CB891587 EST648556 KV3 Medicago truncatula cD... 90 2e-021
emb|CR342772.1| mte1-75N9RM1 BAC end, cultivar Jemalong A17... 91 4e-021
>gb|CB891989.1|CB891989 EST648958 KV3 Medicago truncatula cDNA clone KV3-52F16, mRNA
sequence
Length = 452
Score = 121 bits (258), Expect = 1e-026
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +2 / -1
Query: 62 APVNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVT 241
A V TYLGRPWKE++RTV M+S +D F++ G+ W G L T ++ E+ N G G++
Sbjct: 446 ATVKTYLGRPWKEYSRTVYMQSFMDSFINPSGWREWNGDFALSTLYYAEYDNRGAGSSTA 267
Query: 242 GRKEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
R G+HV+G A FTV +F+ G DWIP+TG P
Sbjct: 266 NRVTWPGYHVIGATDAANFTVSNFVSGDDWIPQTGVP 156
>gb|AC153005.13| Medicago truncatula clone mth2-103l24, WORKING DRAFT SEQUENCE, 12
unordered pieces
Length = 110777
Score = 120 bits (257), Expect = 2e-026
Identities = 45/95 (47%), Positives = 61/95 (64%)
Frame = +2 / -2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S +D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 62485 VQTYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNGDFALNTLYYAEYSNRGAGSSTVNR 62306
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 62305 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 62201
Score = 119 bits (254), Expect = 4e-026
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 15129 VQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNR 14950
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 14949 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 14845
Score = 68.9 bits (144), Expect(2) = 5e-022
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGG 223
V TYLGRPWKE++RTV M+S D F++ G+ W G L T ++ E+ N G
Sbjct: 57969 VQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRG 57814
Score = 56.1 bits (116), Expect(2) = 5e-022
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2 / -3
Query: 218 GGDGANVTGRKEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G G++ R G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 57825 GNRGSSTANRVTWTGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 57691
>gb|AC174141.1| Medicago truncatula clone mth2-165i11, WORKING DRAFT SEQUENCE, 11
unordered pieces
Length = 224017
Score = 120 bits (257), Expect = 2e-026
Identities = 45/95 (47%), Positives = 61/95 (64%)
Frame = +2 / +2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S +D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 57293 VQTYLGRPWKEYSRTVFMQSFMDSFINPAGWHEWNGDFALNTLYYAEYSNRGAGSSTVNR 57472
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 57473 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 57577
Score = 119 bits (254), Expect = 4e-026
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +2 / +3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 48375 VQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNR 48554
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 48555 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 48659
Score = 68.9 bits (144), Expect(2) = 5e-022
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +2 / -2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGG 223
V TYLGRPWKE++RTV M+S D F++ G+ W G L T ++ E+ N G
Sbjct: 39237 VQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRG 39082
Score = 56.1 bits (116), Expect(2) = 5e-022
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2 / -2
Query: 218 GGDGANVTGRKEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G G++ R G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 39093 GNRGSSTANRVTWTGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 38959
>gb|CG944751.1|CG944751 MBEKJ71TF mth2 Medicago truncatula genomic clone 74K22, DNA
sequence
Length = 863
Score = 119 bits (254), Expect = 4e-026
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +2 / -2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 538 VQTYLGRPWKEYSRTVFMQSFTDSFINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNR 359
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 358 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 254
>gb|BE205420.1|BE205420 EST398096 KV0 Medicago truncatula cDNA clone pKV0-21H11, mRNA
sequence
Length = 633
Score = 118 bits (253), Expect = 6e-026
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2 / +2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ GR
Sbjct: 281 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGR 460
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FTV +FL G DW+P+TG
Sbjct: 461 VTWQGYHVINATDAANFTVANFLLGDDWLPQTG 559
>gb|BF649117.1|BF649117 NF055G07EC1F1054 Elicited cell culture Medicago truncatula cDNA
clone NF055G07EC 5', mRNA sequence
Length = 561
Score = 118 bits (253), Expect = 6e-026
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ GR
Sbjct: 226 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGR 405
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FTV +FL G DW+P+TG
Sbjct: 406 VTWQGYHVINATDAANFTVANFLLGDDWLPQTG 504
>gb|BQ165798.1|BQ165798 EST611667 KVKC Medicago truncatula cDNA clone pKVKC-11H3, mRNA
sequence
Length = 687
Score = 118 bits (253), Expect = 6e-026
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ GR
Sbjct: 484 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGR 305
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FTV +FL G DW+P+TG
Sbjct: 304 VTWQGYHVINATDAANFTVANFLLGDDWLPQTG 206
>gb|CB065548.1|CB065548 EST645229 HOGA Medicago truncatula cDNA clone HOGA-19O17, mRNA
sequence
Length = 819
Score = 118 bits (253), Expect = 6e-026
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ GR
Sbjct: 523 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGR 344
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FTV +FL G DW+P+TG
Sbjct: 343 VTWQGYHVINATDAANFTVANFLLGDDWLPQTG 245
>gb|CA919984.1|CA919984 EST637702 MTUS Medicago truncatula cDNA clone MTUS-21F12, mRNA
sequence
Length = 792
Score = 118 bits (253), Expect = 6e-026
Identities = 43/93 (46%), Positives = 63/93 (67%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ GR
Sbjct: 469 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGR 290
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FTV +FL G DW+P+TG
Sbjct: 289 VTWQGYHVINATDAANFTVANFLLGDDWLPQTG 191
>gb|AL371059.1|AL371059 MtBA41F03R1 MtBA Medicago truncatula cDNA clone MtBA41F03 T7, mRNA
sequence
Length = 496
Score = 117 bits (251), Expect = 1e-025
Identities = 43/93 (46%), Positives = 60/93 (64%)
Frame = +2 / +1
Query: 74 TYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGRKE 253
TYLGRPWKE++RTV M+S +D F++ G+ W G L T ++ E+ N G G++ R
Sbjct: 4 TYLGRPWKEYSRTVYMQSFMDSFINPSGWREWNGDFALSTLYYAEYDNRGAGSSTANRVT 183
Query: 254 MQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +F+ G DWIP+TG P
Sbjct: 184 WPGYHVIGATDAANFTVSNFVSGDDWIPQTGVP 282
>emb|CR491820.1| mth2-165I18RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 556
Score = 116 bits (248), Expect = 3e-025
Identities = 44/95 (46%), Positives = 59/95 (62%)
Frame = +2 / -1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPWKE++RTV M+S D ++ G+ W G L T ++ E+ N G G++ R
Sbjct: 538 VQTYLGRPWKEYSRTVFMQSFTDSLINPAGWHEWNGDFALNTLYYAEYGNRGAGSSTVNR 359
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
G+HV+G A FTV +FL G DWIP+TG P
Sbjct: 358 VTWPGYHVIGATDAANFTVSNFLSGDDWIPQTGVP 254
>gb|BQ156448.1|BQ156448 NF093A06IR1F1049 Irradiated Medicago truncatula cDNA clone
NF093A06IR 5', mRNA sequence
Length = 602
Score = 113 bits (242), Expect = 2e-024
Identities = 41/93 (44%), Positives = 61/93 (65%)
Frame = +2 / +3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V+TYLGRPWKE++RTV M++ +D ++ G+ W+G+ L T ++ EF N G G++ G
Sbjct: 270 VSTYLGRPWKEYSRTVYMQTFMDNVINVAGWRAWDGEFALSTLYYAEFNNSGPGSSTDGX 449
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETG 346
QG+HV+ A FT +FL G DW+P+TG
Sbjct: 450 VTWQGYHVINATDAANFTXANFLLGDDWLPQTG 548
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
Length = 110437
Score = 112 bits (239), Expect = 5e-024
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +2 / -1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
+ TYLGRPWKE++RT+ M+S IDG + +G+M W G L T ++ E+ N G G+N + R
Sbjct: 102721 IKTYLGRPWKEYSRTIYMQSFIDGLIDPKGWMEWLGDFALSTLYYAEYANWGQGSNTSNR 102542
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
+G+H + A +FTV F+ G W+P TG P
Sbjct: 102541 VTWKGYHQIDGKDADEFTVNKFIQGDMWLPMTGVP 102437
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
Length = 129197
Score = 112 bits (239), Expect = 5e-024
Identities = 41/95 (43%), Positives = 60/95 (63%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
+ TYLGRPWKE++RT+ M+S IDG + +G+M W G L T ++ E+ N G G+N + R
Sbjct: 112980 IKTYLGRPWKEYSRTIYMQSFIDGLIDPKGWMEWLGDFALSTLYYAEYANWGQGSNTSNR 112801
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
+G+H + A +FTV F+ G W+P TG P
Sbjct: 112800 VTWKGYHQIDGKDADEFTVNKFIQGDMWLPMTGVP 112696
>emb|CR323217.1| mte1-5N2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 640
Score = 96.4 bits (204), Expect(2) = 9e-023
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPW++++RTVVM+S +DG ++ +G+ PW G L T ++GE+ N G GAN GR
Sbjct: 7 VKTYLGRPWQKYSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGR 186
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 187 VKWPGFHVI 213
Score = 31.3 bits (62), Expect(2) = 9e-023
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 287 ALQFTVGHFLHGADWIPETGTP 352
A++F+VG+FL G WI +G P
Sbjct: 229 AVKFSVGNFLAGDSWISGSGVP 294
>gb|AC155891.2| Medicago truncatula chromosome 2 BAC clone mth2-4g10, complete sequence
Length = 148303
Score = 107 bits (229), Expect = 1e-022
Identities = 39/95 (41%), Positives = 58/95 (61%)
Frame = +2 / -2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW+ F+RTV++ES ID F+ ++G+ W L T F+GE+ N G G+ + R
Sbjct: 102552 VKSYLGRPWRVFSRTVLIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNR 102373
Query: 248 KEMQGFHVMGKDRALQFTVGHFLHGADWIPETGTP 352
E G+H+M + A F+V F+ G W+ T P
Sbjct: 102372 VEWVGYHLMDYNDAYNFSVSEFIIGDQWLESTSVP 102268
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence
Length = 130555
Score = 94.5 bits (200), Expect(2) = 3e-022
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2 / -1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPW++ +RTVVM+S +DG ++ +G+ PW G L T ++GE+ N G GAN GR
Sbjct: 128695 VKTYLGRPWQKHSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGR 128516
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 128515 VKWPGFHVI 128489
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / -1
Query: 287 ALQFTVGHFLHGADWIPETGTP 352
A++F+VG+FL G WI +G P
Sbjct: 128473 AVKFSVGNFLAGDSWISGSGVP 128408
>gb|AC135462.21| Medicago truncatula clone mth2-35o17, complete sequence
Length = 118385
Score = 94.5 bits (200), Expect(2) = 3e-022
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2 / +2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPW++ +RTVVM+S +DG ++ +G+ PW G L T ++GE+ N G GAN GR
Sbjct: 11891 VKTYLGRPWQKHSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGR 12070
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 12071 VKWPGFHVI 12097
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 287 ALQFTVGHFLHGADWIPETGTP 352
A++F+VG+FL G WI +G P
Sbjct: 12113 AVKFSVGNFLAGDSWISGSGVP 12178
>emb|CR347196.1| mte1-80P20RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 609
Score = 94.5 bits (200), Expect(2) = 3e-022
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPW++ +RTVVM+S +DG ++ +G+ PW G L T ++GE+ N G GAN GR
Sbjct: 7 VKTYLGRPWQKHSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGR 186
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 187 VKWPGFHVI 213
Score = 31.3 bits (62), Expect(2) = 3e-022
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 287 ALQFTVGHFLHGADWIPETGTP 352
A++F+VG+FL G WI +G P
Sbjct: 229 AVKFSVGNFLAGDSWISGSGVP 294
>emb|CR322859.1| mte1-5M2RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 417
Score = 93.6 bits (198), Expect(2) = 4e-022
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGRPW++++RTVVM+S +DG ++ + + PW G L T ++GE+ N G GAN GR
Sbjct: 7 VKTYLGRPWQKYSRTVVMKSNLDGLINSESWAPWMGGFALSTLYYGEYMNVGGGANTDGR 186
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 187 VKWPGFHVI 213
Score = 31.8 bits (63), Expect(2) = 4e-022
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2 / +1
Query: 269 VMGKDRALQFTVGHFLHGADWIPETGTP 352
+ A++F+VG+FL G WI +G P
Sbjct: 211 ITNPSHAVKFSVGNFLAGDSWISGSGVP 294
>gb|CB893504.1|CB893504 EST646296 HOGA Medicago truncatula cDNA clone HOGA-28G17, mRNA
sequence
Length = 847
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +2 / +3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW++++RTV M++V+DGF++ G++PW+G L T ++ E+ N G G++ + R
Sbjct: 213 VKSYLGRPWQKYSRTVFMKTVLDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNR 392
Query: 248 KEMQGFHVM 274
+G+HV+
Sbjct: 393 VTWKGYHVL 419
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +3
Query: 284 RALQFTVGHFLHGADWIPETGTP 352
+A FTVG+F+ G WI TG P
Sbjct: 432 QASPFTVGNFIAGNSWIGNTGVP 500
>gb|BG647723.1|BG647723 EST509342 HOGA Medicago truncatula cDNA clone pHOGA-17P17 5' end,
mRNA sequence
Length = 782
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +2 / +2
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW++++RTV M++V+DGF++ G++PW+G L T ++ E+ N G G++ + R
Sbjct: 302 VKSYLGRPWQKYSRTVFMKTVLDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNR 481
Query: 248 KEMQGFHVM 274
+G+HV+
Sbjct: 482 VTWKGYHVL 508
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 284 RALQFTVGHFLHGADWIPETGTP 352
+A FTVG+F+ G WI TG P
Sbjct: 521 QASPFTVGNFIAGNSWIGNTGVP 589
>gb|BG648898.1|BG648898 EST510517 HOGA Medicago truncatula cDNA clone pHOGA-24M23 5' end,
mRNA sequence
Length = 765
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW++++RTV M++V+DGF++ G++PW+G L T ++ E+ N G G++ + R
Sbjct: 409 VKSYLGRPWQKYSRTVFMKTVLDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNR 588
Query: 248 KEMQGFHVM 274
+G+HV+
Sbjct: 589 VTWKGYHVL 615
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 284 RALQFTVGHFLHGADWIPETGTP 352
+A FTVG+F+ G WI TG P
Sbjct: 628 QASPFTVGNFIAGYSWIGNTGVP 696
>gb|CB893287.1|CB893287 EST646079 HOGA Medicago truncatula cDNA clone HOGA-27K4, mRNA
sequence
Length = 746
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +2 / +3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW++++RTV M++V+DGF++ G++PW+G L T ++ E+ N G G++ + R
Sbjct: 141 VKSYLGRPWQKYSRTVFMKTVLDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNR 320
Query: 248 KEMQGFHVM 274
+G+HV+
Sbjct: 321 VTWKGYHVL 347
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +3
Query: 284 RALQFTVGHFLHGADWIPETGTP 352
+A FTVG+F+ G WI TG P
Sbjct: 360 QASPFTVGNFIAGNSWIGNTGVP 428
>gb|CB891587.1|CB891587 EST648556 KV3 Medicago truncatula cDNA clone KV3-51A9, mRNA
sequence
Length = 522
Score = 90.4 bits (191), Expect(2) = 2e-021
Identities = 29/69 (42%), Positives = 51/69 (73%)
Frame = +2 / -3
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V +YLGRPW++++RTV M++V+DGF++ G++PW+G L T ++ E+ N G G++ + R
Sbjct: 511 VKSYLGRPWQKYSRTVFMKTVLDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNR 332
Query: 248 KEMQGFHVM 274
+G+HV+
Sbjct: 331 VTWKGYHVL 305
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / -3
Query: 284 RALQFTVGHFLHGADWIPETGTP 352
+A FTVG+F+ G WI TG P
Sbjct: 292 QASPFTVGNFIAGNSWIGNTGVP 224
>emb|CR342772.1| mte1-75N9RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 530
Score = 90.9 bits (192), Expect(2) = 4e-021
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2 / +1
Query: 68 VNTYLGRPWKEFARTVVMESVIDGFVHRQGYMPWEGKDNLGTAFFGEFRNGGDGANVTGR 247
V TYLGR W++ +RTVVM+S +DG ++ +G+ PW G L T ++GE+ N G GAN GR
Sbjct: 7 VKTYLGRSWQKHSRTVVMKSNLDGLINSEGWAPWMGGFALSTLYYGEYMNVGGGANTDGR 186
Query: 248 KEMQGFHVM 274
+ GFHV+
Sbjct: 187 VKWPGFHVI 213
Score = 31.3 bits (62), Expect(2) = 4e-021
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 287 ALQFTVGHFLHGADWIPETGTP 352
A++F+VG+FL G WI +G P
Sbjct: 229 AVKFSVGNFLAGDSWISGSGVP 294
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 381,117,741
Number of Sequences: 392609
Number of extensions: 4451843
Number of successful extensions: 40632
Number of sequences better than 1.0e-020: 31
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 17195303344
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)