TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696657.2.1
(1531 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC144656.12| Medicago truncatula clone mth2-27d4, comple... 106 2e-045
gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula c... 144 2e-043
emb|AJ620946.1| Medicago truncatula PG3 gene for polygalact... 128 1e-041
gb|AC126012.22| Medicago truncatula clone mth2-27p4, comple... 128 1e-039
gb|AC141110.7| Medicago truncatula clone mth2-17i10, comple... 128 1e-039
gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone m... 110 7e-038
gb|AC144760.27| Medicago truncatula clone mth2-8p15, comple... 90 2e-037
gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula ... 127 1e-035
gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower M... 124 4e-035
gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKI... 135 2e-034
gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating ... 136 4e-034
gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell cultu... 143 4e-033
gb|AC153001.7| Medicago truncatula clone mth2-95k24, comple... 66 6e-033
gb|AC124961.19| Medicago truncatula clone mth2-18l7, comple... 66 7e-033
gb|AC155892.1| Medicago truncatula chromosome 7 clone mth2-... 66 2e-032
emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A1... 132 1e-030
gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infect... 128 2e-028
emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-8... 58 3e-027
gb|AC122167.8| Medicago truncatula clone mth1-10d10, comple... 53 7e-027
gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone m... 53 2e-026
gb|AC124965.18| Medicago truncatula clone mth2-7h21, comple... 58 3e-026
emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2... 61 3e-026
gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-... 57 6e-026
gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Med... 95 7e-026
gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (... 60 8e-026
gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula ... 80 2e-025
gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-... 49 2e-025
gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone m... 49 8e-025
gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING... 60 1e-024
gb|AC144805.7| Medicago truncatula clone mth2-72a11, comple... 63 1e-022
gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula c... 104 2e-022
gb|AC136840.24| Medicago truncatula clone mth2-33n3, comple... 66 6e-021
gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Me... 80 6e-021
gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone m... 51 8e-021
>gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete sequence
Length = 102057
Score = 106 bits (226), Expect(5) = 2e-045
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = -2 / +1
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V+G+ LNSK HI +D+ +++ +KDV + AP+ NTDG++V S+ ++I +STI
Sbjct: 69100 NVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPSRSPNTDGINVQFSTGVTISHSTIM 69279
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
TGDDC+SI G V +D I CGPG GI
Sbjct: 69280 TGDDCISINQGTTHVWIDRIACGPGHGI 69363
Score = 60.6 bits (126), Expect(5) = 2e-045
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPC 1207
+ +++ GA SDG D TK AW+ AC++ ++T+ +P+G +L+ ++F GPC
Sbjct: 68012 SINVASFGAKSDGTQDSTKPFLSAWSLACKSNEASTIYVPQGSFLLKQVSFWGPC 68176
Score = 51.9 bits (107), Expect(5) = 2e-045
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = -2 / +3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEY 349
+S V + V++++I GTS++P AI CS++ PC G+ L D+N+ Y
Sbjct: 70905 NSGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIY 71042
Score = 40.0 bits (81), Expect(5) = 2e-045
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG +E V ++TV + V T NGVRIKS+
Sbjct: 69936 SIGSLGSDSNEAGVENVTVTDSVFTKTQNGVRIKSW 70043
Score = 36.3 bits (73), Expect(5) = 2e-045
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKVCP 502
A + F N+ M+ V PI+IDQ +C + CP
Sbjct: 70065 ARDINFRNLIMQNVYYPIIIDQRYCTKTDCP 70157
>gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula cDNA clone MtN408H03N1, mRNA
sequence
Length = 677
Score = 144 bits (308), Expect(3) = 2e-043
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = -2 / -1
Query: 1029 KAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVG 850
K P L + +V+GI + NS+ H+ D+ ++ V D+ ++P D NTDG+H+
Sbjct: 563 KTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQ 384
Query: 849 GSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITV 670
S + I ST+ GDDCVSI GC+ +LV ++ CGPG GIS+G LG+ + VS++TV
Sbjct: 383 NSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTV 204
Query: 669 RNCVLKNTTNGVRIKSY 619
R+ L+NT GVRIK++
Sbjct: 203 RDVTLQNTLTGVRIKTW 153
Score = 37.7 bits (76), Expect(3) = 2e-043
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2 / -1
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
T W+E + +N I I G G +DGQG+ ++ S+
Sbjct: 671 TLQWLEFTKLNKITIKGKGVIDGQGSVWWNDSE 573
Score = 35.0 bits (70), Expect(3) = 2e-043
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ ++ F NI++ +V PI+IDQ++C C
Sbjct: 137 SVQNIMFSNIQVSDVKTPIMIDQFYCDGGKC 45
>emb|AJ620946.1| Medicago truncatula PG3 gene for polygalacturonase precursor, exons
1-4
Length = 2050
Score = 128 bits (274), Expect(3) = 1e-041
Identities = 47/111 (42%), Positives = 69/111 (62%)
Frame = -2 / +2
Query: 837 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCV 658
+ +LN+ I TGDDC+S+G G + V ++ CGPG GISVG LG+ E+ + V+NC
Sbjct: 1415 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 1594
Query: 657 LKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ NT NGVRIK++ + + + FE+ M V NP++IDQ +CP C
Sbjct: 1595 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQC 1747
Score = 47.8 bits (98), Expect(3) = 1e-041
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2 / +2
Query: 960 NSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
+SK FH+N+ + T + +TAPA +NTDG+H+G S+
Sbjct: 1289 DSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 1408
Score = 43.7 bits (89), Expect(3) = 1e-041
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -2 / +2
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A +AW +AC +T ++ V+IP+G Y + ++ GPCK
Sbjct: 548 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCK 658
>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
Length = 108900
Score = 128 bits (274), Expect(4) = 1e-039
Identities = 47/111 (42%), Positives = 69/111 (62%)
Frame = -2 / -3
Query: 837 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCV 658
+ +LN+ I TGDDC+S+G G + V ++ CGPG GISVG LG+ E+ + V+NC
Sbjct: 40270 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 40091
Query: 657 LKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ NT NGVRIK++ + + + FE+ M V NP++IDQ +CP C
Sbjct: 40090 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQC 39938
Score = 47.8 bits (98), Expect(4) = 1e-039
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2 / -3
Query: 960 NSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
+SK FH+N+ + T + +TAPA +NTDG+H+G S+
Sbjct: 40396 DSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 40277
Score = 43.7 bits (89), Expect(4) = 1e-039
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -2 / -3
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A +AW +AC +T ++ V+IP+G Y + ++ GPCK
Sbjct: 41137 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCK 41027
Score = 30.9 bits (61), Expect(4) = 1e-039
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 202 SSLVLFNFRFIRFSKFDCVSAKLFSGTS 119
SSLV+F SK C+S ++F GT+
Sbjct: 23754 SSLVIFKSHLAAISKSPCLSLRIFKGTT 23671
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
Length = 113345
Score = 128 bits (274), Expect(4) = 1e-039
Identities = 47/111 (42%), Positives = 69/111 (62%)
Frame = -2 / -1
Query: 837 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCV 658
+ +LN+ I TGDDC+S+G G + V ++ CGPG GISVG LG+ E+ + V+NC
Sbjct: 95492 VKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVKNCT 95313
Query: 657 LKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ NT NGVRIK++ + + + FE+ M V NP++IDQ +CP C
Sbjct: 95312 ISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQC 95160
Score = 47.8 bits (98), Expect(4) = 1e-039
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2 / -1
Query: 960 NSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
+SK FH+N+ + T + +TAPA +NTDG+H+G S+
Sbjct: 95618 DSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRST 95499
Score = 43.7 bits (89), Expect(4) = 1e-039
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -2 / -1
Query: 1314 AVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCK 1204
A +AW +AC +T ++ V+IP+G Y + ++ GPCK
Sbjct: 96359 AFTNAWKAACGSTTASKVIIPRGIYKIHAVDVKGPCK 96249
Score = 30.9 bits (61), Expect(4) = 1e-039
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1 / -2
Query: 202 SSLVLFNFRFIRFSKFDCVSAKLFSGTS 119
SSLV+F SK C+S ++F GT+
Sbjct: 78976 SSLVIFKSHLAAISKSPCLSLRIFKGTT 78893
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
sequence
Length = 132817
Score = 110 bits (234), Expect(5) = 7e-038
Identities = 42/74 (56%), Positives = 57/74 (77%)
Frame = -2 / +1
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
KI+I +S I TGDDC+SIG G + + ++TCGPG GISVG LG+Y +E+ + ITVRNC
Sbjct: 15568 KINITSSYISTGDDCISIGDGSKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNC 15747
Query: 660 VLKNTTNGVRIKSY 619
L+NT NG+RIK++
Sbjct: 15748 TLRNTDNGLRIKTW 15789
Score = 45.5 bits (93), Expect(5) = 7e-038
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 489 NSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVN 358
+S + + VTF++ITGTS+T + L+CS PC V L +++
Sbjct: 16040 SSLKIKISKVTFKDITGTSATQNGVVLICSSGVPCEEVVLSNID 16171
Score = 43.2 bits (88), Expect(5) = 7e-038
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2 / +3
Query: 1299 WTSACEATGSATVVIPKGDYLVGPLNFTGPC 1207
W AC +T S+ ++IPKG Y + +N GPC
Sbjct: 14892 WKEACASTSSSKILIPKGTYKLKQVNLRGPC 14984
Score = 41.4 bits (84), Expect(5) = 7e-038
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -2 / +3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENT 868
N+ + GI +SK+FH+N+ +++T D + TAPA N+
Sbjct: 15420 NSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATSPNS 15542
Score = 30.4 bits (60), Expect(5) = 7e-038
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 591 SHLTFENIRMEEVANPIVI 535
S+L FENI M+ V+NP++I
Sbjct: 15820 SNLHFENIIMDNVSNPVII 15876
>gb|AC144760.27| Medicago truncatula clone mth2-8p15, complete sequence
Length = 108569
Score = 90.0 bits (190), Expect(6) = 2e-037
Identities = 34/63 (53%), Positives = 47/63 (74%)
Frame = -2 / -2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRI 628
GDDCVSI GC+ +LV ++ CGPG GIS+G LG+ + VS++TVR+ L+NT GVRI
Sbjct: 33760 GDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVRI 33581
Query: 627 KSY 619
K++
Sbjct: 33580 KTW 33572
Score = 56.1 bits (116), Expect(6) = 2e-037
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = -2 / -1
Query: 984 TVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
+V+GI + NS+ H+ D+ ++ V D+ ++P D NTDG+H+ S + I ST+ G
Sbjct: 34022 SVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCG 33843
Score = 42.8 bits (87), Expect(6) = 2e-037
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2 / -2
Query: 1317 KAVQDAWTSACEATGSATVVIPKGDYLVGPLNFTGPCKGSNIAIQ 1183
+A +DAW +AC+ S VV +LV P++F+GP NI Q
Sbjct: 35545 QAFEDAWAAACKMEASTMVVPSGSVFLVKPISFSGPNCEPNIVFQ 35411
Score = 37.7 bits (76), Expect(6) = 2e-037
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 1140 TASWIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
T W+E + +N I I G G +DGQG+ ++ S+
Sbjct: 34659 TLQWLEFTKLNKITIKGKGVIDGQGSVWWNDSE 34561
Score = 35.0 bits (70), Expect(6) = 2e-037
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2 / -3
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVC 505
+ ++ F NI++ +V PI+IDQ++C C
Sbjct: 33018 SVQNIMFSNIQVSDVKTPIMIDQFYCDGGKC 32926
Score = 31.3 bits (62), Expect(6) = 2e-037
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2 / -3
Query: 429 TPEAISLLCSETQPCSGVSLIDVNVEYAGKNN 334
T E I CS++ PC G++L + +E + +N
Sbjct: 32862 TKEPIYFACSDSLPCKGITLDTIKLESSQNSN 32767
>gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula cDNA clone pMHRP-57F15, mRNA
sequence
Length = 631
Score = 127 bits (272), Expect(3) = 1e-035
Identities = 53/121 (43%), Positives = 73/121 (60%)
Frame = -2 / +2
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
V ++ +S+ H+ + ++ V ++ V AP D NTDG+HV + I I+N IGTGD
Sbjct: 8 VKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGTGD 187
Query: 801 DCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
DC+SI G V ITCGPG GIS+G LG E +VS++ V L TTNGVRIK+
Sbjct: 188 DCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRIKT 367
Query: 621 Y 619
+
Sbjct: 368 W 370
Score = 36.3 bits (73), Expect(3) = 1e-035
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQY 526
A ++ F NI+M+ V NP++IDQY
Sbjct: 390 ARNIKFMNIKMQNVTNPVIIDQY 458
Score = 26.7 bits (52), Expect(3) = 1e-035
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2 / +1
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCS 400
V + V ++NI GTS++ AI CS
Sbjct: 502 VQLSQVLYQNIRGTSASEIAIKFNCS 579
>gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower Medicago truncatula cDNA clone
NF062C04FL 5', mRNA sequence
Length = 669
Score = 124 bits (266), Expect(3) = 4e-035
Identities = 48/120 (40%), Positives = 74/120 (61%)
Frame = -2 / +2
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K N ++P++L + NA V + LNS FH ++ +I+ ++++TAP + N
Sbjct: 242 KQNKGNCASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPN 421
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEK 691
TDG+H+ S I++ NS I TGDDC+S+G + + + ITCGPG GISVG LG+ +EK
Sbjct: 422 TDGMHISSSDFITVTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEK 601
Score = 32.7 bits (65), Expect(3) = 4e-035
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2 / +2
Query: 1143 YTASWIELSHVNNIGITGSGTLDGQGT 1063
Y+ W + +++ + + GSG DGQG+
Sbjct: 137 YSPEWFQFENIDGLVLKGSGVFDGQGS 217
Score = 31.3 bits (62), Expect(3) = 4e-035
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2 / +2
Query: 1269 ATVVIPKGDYLVGPLNFTGPC 1207
ATV+IP G ++ G F GPC
Sbjct: 5 ATVLIPAGTFVTGQTLFAGPC 67
>gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 126642
Score = 135 bits (290), Expect(2) = 2e-034
Identities = 52/127 (40%), Positives = 81/127 (63%)
Frame = -2 / -1
Query: 999 HVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNS 820
++ N + + NSK H + ++T+ + + AP D NTDG+ +G S+ I+I +
Sbjct: 67215 YITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGINITSV 67036
Query: 819 TIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTN 640
I TG+DC+S+ G V + + CGPG GI++G LG+Y+DE+D++DI V+NC T+N
Sbjct: 67035 NIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGSLGKYEDEEDLADIIVKNCTFNGTSN 66856
Query: 639 GVRIKSY 619
GVRIKSY
Sbjct: 66855 GVRIKSY 66835
Score = 32.7 bits (65), Expect(2) = 2e-034
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 600 LTASHLTFENIRMEEVANPIVIDQYFC 520
+ AS+ +E+I ME V IVIDQ++C
Sbjct: 66813 VVASNFIYEDIVMENVEYHIVIDQHYC 66733
>gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 614
Score = 136 bits (291), Expect(2) = 4e-034
Identities = 57/133 (42%), Positives = 81/133 (60%)
Frame = -2 / +3
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P +L V NA + GIK +N K FH+ + +I ++ + +TAP NTDG+H+ S
Sbjct: 216 PPSLYFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLTAPDTSPNTDGIHISTSY 395
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+ I TIGTGDDCV + G + ++ + CGPG GIS+G LGR DE++V + V+N
Sbjct: 396 GVKINRCTIGTGDDCVGMIDGSEQIAINKLECGPGHGISIGSLGRRADEREVKGVRVQNS 575
Query: 660 VLKNTTNGVRIKS 622
L T NG+RIKS
Sbjct: 576 ELIGTDNGLRIKS 614
Score = 31.3 bits (62), Expect(2) = 4e-034
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 1131 WIELSHVNNIGITGSGTLDGQG 1066
W E +N + + G GT DGQG
Sbjct: 84 WFEFQDLNGLKMLGGGTFDGQG 149
>gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell culture Medicago truncatula cDNA clone
NF020D02EC 5', mRNA sequence
Length = 680
Score = 143 bits (307), Expect(2) = 4e-033
Identities = 59/131 (45%), Positives = 80/131 (61%)
Frame = -2 / +3
Query: 1020 PNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSS 841
P + + IN TV GI + NS H+ DN + V DV +++P D NTDG+H+ S
Sbjct: 288 PTAIRFYGSINPTVTGITIQNSPQCHLKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSR 467
Query: 840 KISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNC 661
+ I ST+ GDDC+SI GC+ V V ++ CGPG GIS+G LG+ VS+ITVR+
Sbjct: 468 DVLIYKSTMACGDDCISIQTGCSNVYVHNVDCGPGHGISIGGLGKDNTRACVSNITVRDV 647
Query: 660 VLKNTTNGVRI 628
+ NT NGVRI
Sbjct: 648 NMHNTMNGVRI 680
Score = 24.0 bits (46), Expect(2) = 4e-033
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 1131 WIELSHVNNIGITGSGTLDGQGT 1063
W++ + + I G+G DG+G+
Sbjct: 84 WLDFTKLVGFTIQGNGIFDGRGS 152
>gb|AC153001.7| Medicago truncatula clone mth2-95k24, complete sequence
Length = 100724
Score = 65.7 bits (137), Expect(6) = 6e-033
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2 / -1
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N TV G+++ NS FH D +S+ V+ + +TAPA NTDG+H+ ++ + I NS +
Sbjct: 91892 NLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVS 91713
Query: 810 TG 805
G
Sbjct: 91712 NG 91707
Score = 51.5 bits (106), Expect(6) = 6e-033
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / -2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDCVSIG GC V + +ITCGPG GI
Sbjct: 91612 GDDCVSIGSGCYDVDIKNITCGPGHGI 91532
Score = 48.3 bits (99), Expect(6) = 6e-033
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / -3
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRS 490
+ S +TF NI M+ V NPI+IDQ++C K C K S
Sbjct: 91092 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKTS 90985
Score = 41.8 bits (85), Expect(6) = 6e-033
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2 / -3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + VS+ITVR+ V++ + NGVRIK++
Sbjct: 91215 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTW 91108
Score = 37.3 bits (75), Expect(6) = 6e-033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / -1
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
D+ K GA DG TD T++ + AW +AC++ V+
Sbjct: 93152 DVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVI 93045
Score = 31.8 bits (63), Expect(6) = 6e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 1131 WIELSHVNNIGITGSGTLDGQG 1066
W+ VN + + GSGT+DG+G
Sbjct: 92255 WLVFYRVNGMSLEGSGTIDGRG 92190
>gb|AC124961.19| Medicago truncatula clone mth2-18l7, complete sequence
Length = 106560
Score = 65.7 bits (137), Expect(6) = 7e-033
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2 / +2
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N TV G+++ NS FH D +S+ V+ + +TAPA NTDG+H+ ++ + I NS +
Sbjct: 10583 NLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVS 10762
Query: 810 TG 805
G
Sbjct: 10763 NG 10768
Score = 51.5 bits (106), Expect(6) = 7e-033
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / +3
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDCVSIG GC V + +ITCGPG GI
Sbjct: 10863 GDDCVSIGSGCYDVDIKNITCGPGHGI 10943
Score = 48.3 bits (99), Expect(6) = 7e-033
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / +1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRS 490
+ S +TF NI M+ V NPI+IDQ++C K C K S
Sbjct: 11383 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKTS 11490
Score = 41.8 bits (85), Expect(6) = 7e-033
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2 / +1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + VS+ITVR+ V++ + NGVRIK++
Sbjct: 11260 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTW 11367
Score = 37.3 bits (75), Expect(6) = 7e-033
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / +2
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
D+ K GA DG TD T++ + AW +AC++ V+
Sbjct: 9323 DVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVI 9430
Score = 31.8 bits (63), Expect(6) = 7e-033
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQG 1066
W+ VN + + GSGT+DG+G
Sbjct: 10220 WLVFYRVNGMSLEGSGTIDGRG 10285
>gb|AC155892.1| Medicago truncatula chromosome 7 clone mth2-52p13, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 126906
Score = 65.7 bits (137), Expect(6) = 2e-032
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2 / +1
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N TV G+++ NS FH D +S+ V+ + +TAPA NTDG+H+ ++ + I NS +
Sbjct: 67180 NLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVS 67359
Query: 810 TG 805
G
Sbjct: 67360 NG 67365
Score = 51.5 bits (106), Expect(6) = 2e-032
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / +2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDCVSIG GC V + +ITCGPG GI
Sbjct: 67460 GDDCVSIGSGCYDVDIKNITCGPGHGI 67540
Score = 48.3 bits (99), Expect(6) = 2e-032
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -2 / +3
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRS 490
+ S +TF NI M+ V NPI+IDQ++C K C K S
Sbjct: 67980 SVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKTS 68087
Score = 41.8 bits (85), Expect(6) = 2e-032
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + VS+ITVR+ V++ + NGVRIK++
Sbjct: 67857 SIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTW 67964
Score = 37.3 bits (75), Expect(6) = 2e-032
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
D+ K GA DG TD T++ + AW +AC++ V+
Sbjct: 65920 DVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVI 66027
Score = 31.8 bits (63), Expect(6) = 2e-032
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQG 1066
W+ VN + + GSGT+DG+G
Sbjct: 66817 WLVFYRVNGMSLEGSGTIDGRG 66882
>emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 708
Score = 132 bits (283), Expect(2) = 1e-030
Identities = 54/132 (40%), Positives = 81/132 (61%)
Frame = -2 / +3
Query: 1014 TLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKI 835
T+ + N V + ++SK H + E++ ++ + +TAP D NTDG+ +G S I
Sbjct: 165 TMKFDFITNGYVHDMHSIDSKQSHFVLFGCENMLLRGLKITAPKDSPNTDGIKIGMSKGI 344
Query: 834 SILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVL 655
+I + IGTGDDC+++ G V + + CGPG GISVG LG + E+D+ DI V+NC
Sbjct: 345 NISSVNIGTGDDCIAMLSGTRNVRISDVFCGPGHGISVGSLGGNEGEEDIDDIVVKNCTF 524
Query: 654 KNTTNGVRIKSY 619
T+NGVRIKS+
Sbjct: 525 NGTSNGVRIKSW 560
Score = 23.1 bits (44), Expect(2) = 1e-030
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2 / +1
Query: 546 PIVIDQYFCPQKVC 505
PIVIDQ +C C
Sbjct: 637 PIVIDQDYCSHPPC 678
>gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 542
Score = 128 bits (274), Expect = 2e-028
Identities = 53/144 (36%), Positives = 82/144 (56%)
Frame = -2 / +1
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K+KT+ K P L + + V G+ + NS+ H I +S+ + V V +P D N
Sbjct: 49 KNKTNPCKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASPGDSPN 228
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEK 691
TDG+H+ S+ + + + IGTGDDC+SI + + + I CGPG GIS+G LG+
Sbjct: 229 TDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTG 408
Query: 690 DVSDITVRNCVLKNTTNGVRIKSY 619
V+ + + LK TTNG+RIK++
Sbjct: 409 VVTKVILDTAFLKGTTNGLRIKTW 480
>emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-85A3 on chromosome 3,
complete sequence
Length = 78707
Score = 57.9 bits (120), Expect(6) = 3e-027
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -2 / +3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V I+ N++ H+ I ++ ++ VTAP NTDG+H+ S + I NSTIG
Sbjct: 53112 NLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNVFITNSTIG 53291
Query: 810 TG 805
TG
Sbjct: 53292 TG 53297
Score = 47.8 bits (98), Expect(6) = 3e-027
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -2 / +3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
+S V + +V ++NI GTS++ AI L CS+ PC G+ L DV +
Sbjct: 55455 NSAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 55586
Score = 42.8 bits (87), Expect(6) = 3e-027
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC+SI G V ITCGPG GI
Sbjct: 53770 GDDCISIVSGSKNVRATDITCGPGHGI 53850
Score = 38.6 bits (78), Expect(6) = 3e-027
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + +VS++ V L TTNGVRIK++
Sbjct: 53940 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTW 54047
Score = 36.8 bits (74), Expect(6) = 3e-027
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQK 511
A ++ F NI + V NPI+IDQ +C QK
Sbjct: 54779 ARNIKFINIVVRNVTNPIIIDQKYCDQK 54862
Score = 30.4 bits (60), Expect(6) = 3e-027
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
WI+ +V N+ + G GT++G G + S
Sbjct: 52339 WIKFENVTNLIVDGGGTINGNGRIWWENS 52425
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence
Length = 93126
Score = 53.3 bits (110), Expect(6) = 7e-027
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -2 / -1
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGT 298
+ V DVT+R I+GTS T +AI+L C + CS + V V A K + C NA G
Sbjct: 26451 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 26272
Query: 297 A 295
A
Sbjct: 26271 A 26269
Score = 46.9 bits (96), Expect(6) = 7e-027
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2 / -1
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
+ G +N HI + + + + ++ + AP + NTDG+ + S I +LNS I TG+
Sbjct: 27336 IKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGN 27157
Score = 43.2 bits (88), Expect(6) = 7e-027
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -2 / -1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC++I G + + + +ITCGPG GI
Sbjct: 27090 GDDCIAISAGSSVIKITAITCGPGHGI 27010
Score = 40.5 bits (82), Expect(6) = 7e-027
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
S+G LG D V D+ V+NC L T GVRIK+
Sbjct: 26913 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT 26809
Score = 36.3 bits (73), Expect(6) = 7e-027
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFC 520
A +TFENI+ NPI IDQ++C
Sbjct: 26646 ARRITFENIKFVRAHNPIWIDQFYC 26572
Score = 34.1 bits (68), Expect(6) = 7e-027
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
+WI S VN + I+G GT+DG+G+
Sbjct: 27736 TWIGFSFVNGLIISGKGTVDGRGS 27665
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
sequence
Length = 113539
Score = 53.3 bits (110), Expect(6) = 2e-026
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = -2 / -3
Query: 477 VSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGT 298
+ V DVT+R I+GTS T +AI+L C + CS + V V A K + C NA G
Sbjct: 59738 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 59559
Query: 297 A 295
A
Sbjct: 59558 A 59556
Score = 46.9 bits (96), Expect(6) = 2e-026
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2 / -3
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
+ G +N HI + + + + ++ + AP + NTDG+ + S I +LNS I TG+
Sbjct: 60623 IKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGN 60444
Score = 43.2 bits (88), Expect(6) = 2e-026
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -2 / -3
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC++I G + + + +ITCGPG GI
Sbjct: 60377 GDDCIAISAGSSVIKITAITCGPGHGI 60297
Score = 40.5 bits (82), Expect(6) = 2e-026
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2 / -3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
S+G LG D V D+ V+NC L T GVRIK+
Sbjct: 60200 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT 60096
Score = 36.3 bits (73), Expect(6) = 2e-026
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFC 520
A +TFENI+ NPI IDQ++C
Sbjct: 59933 ARRITFENIKFVRAHNPIWIDQFYC 59859
Score = 34.1 bits (68), Expect(6) = 2e-026
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 1134 SWIELSHVNNIGITGSGTLDGQGT 1063
+WI S VN + I+G GT+DG+G+
Sbjct: 61023 TWIGFSFVNGLIISGKGTVDGRGS 60952
>gb|AC124965.18| Medicago truncatula clone mth2-7h21, complete sequence
Length = 122160
Score = 57.9 bits (120), Expect(6) = 3e-026
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -2 / -3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N V I+ N++ H+ I ++ ++ VTAP NTDG+H+ S + I NSTIG
Sbjct: 15616 NLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNVFITNSTIG 15437
Query: 810 TG 805
TG
Sbjct: 15436 TG 15431
Score = 47.8 bits (98), Expect(6) = 3e-026
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -2 / -2
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
+S V + +V ++NI GTS++ AI L CS+ PC G+ L DV +
Sbjct: 13274 NSAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 13143
Score = 42.8 bits (87), Expect(6) = 3e-026
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC+SI G V ITCGPG GI
Sbjct: 14958 GDDCISIVSGSKNVRATDITCGPGHGI 14878
Score = 38.6 bits (78), Expect(6) = 3e-026
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2 / -3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + +VS++ V L TTNGVRIK++
Sbjct: 14788 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTW 14681
Score = 36.8 bits (74), Expect(6) = 3e-026
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQK 511
A ++ F NI + V NPI+IDQ +C QK
Sbjct: 13949 ARNIKFINIVVRNVTNPIIIDQKYCDQK 13866
Score = 30.4 bits (60), Expect(6) = 3e-026
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
WI+ +V N+ + G GT++G G + S
Sbjct: 16389 WIKFENVTNLIVDGGGTINGNGRIWWENS 16303
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE
Length = 128654
Score = 61.1 bits (127), Expect(6) = 3e-026
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -2 / -1
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
+ IK+ NS H+ DNS+ I V ++ +++P + NTDG+H+ + + I +S IGTG
Sbjct: 48230 IRDIKIKNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGTG 48054
Score = 46.9 bits (96), Expect(6) = 3e-026
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2 / -1
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+GDDCVSI GC+ + V I CGPG GI
Sbjct: 47570 SGDDCVSIQTGCSNIHVHHIKCGPGHGI 47487
Score = 37.7 bits (76), Expect(6) = 3e-026
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKSKTDNVK 1027
WI V N I G GT+DGQG+ +S SK +++
Sbjct: 48671 WINFKWVQNFTIKGYGTIDGQGSNWWSSSKLYDIQ 48567
Score = 37.3 bits (75), Expect(6) = 3e-026
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = -2 / -1
Query: 588 HLTFENIRMEEVANPIVIDQYFCPQKVC 505
+++F I++ +V P++IDQY+C +++C
Sbjct: 46715 NVSFSRIKVYDVMYPVMIDQYYCDKQIC 46632
Score = 36.3 bits (73), Expect(6) = 3e-026
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2 / -3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG+ K VSDI V + +KNT G RIK++
Sbjct: 47403 SLGGLGKDKSVACVSDIIVEDISMKNTLYGARIKTW 47296
Score = 35.0 bits (70), Expect(6) = 3e-026
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 1302 AWTSACEATGSATVVIPKGDYLVGPLNFTGPC 1207
AW AC+ +G+ V K +L+ P+ GPC
Sbjct: 49027 AWKCACKVSGATIKVPEKLKFLIKPITLQGPC 48932
>gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-84h13, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 121593
Score = 57.4 bits (119), Expect(5) = 6e-026
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -2 / -3
Query: 1023 MPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGS 844
M + F N TV G+K+ NS F+ D ++ ++ + +TAP NTDG+H+ +
Sbjct: 36007 MMQAIRFFMSSNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKISPNTDGIHLEYA 35828
Query: 843 SKISILNSTIGTG 805
+ + I NS I G
Sbjct: 35827 NDVKIYNSVISNG 35789
Score = 48.3 bits (99), Expect(5) = 6e-026
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = -2 / -1
Query: 597 TASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSVKDVTFRNITGTSSTP 424
+ S +TF NI M V NPI+IDQY+C K C K S S ++ + S P
Sbjct: 34815 SVSGVTFNNIHMISVRNPIIIDQYYCLTKDCTNKTSAVSVSNILYTNIKGTYDIKSPP 34642
Score = 44.1 bits (90), Expect(5) = 6e-026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDCVSIG G V + +ITCGP GI
Sbjct: 35705 GDDCVSIGTGSYDVDIKNITCGPSHGI 35625
Score = 42.8 bits (87), Expect(5) = 6e-026
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = -2 / -1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG + + VS+ITVR+ ++K + NG+RIK++
Sbjct: 34938 SIGSLGNHNTKACVSNITVRDSIIKMSDNGIRIKTW 34831
Score = 36.3 bits (73), Expect(5) = 6e-026
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2 / -3
Query: 1368 FDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVI 1255
FD+ GA DG D T++ + AW +AC+ V++
Sbjct: 36913 FDVRSFGAIGDGIEDDTESFKMAWDTACQNGSDVNVIL 36800
>gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Medicago truncatula cDNA clone
NF081A01LF 5', mRNA sequence
Length = 583
Score = 94.5 bits (200), Expect(2) = 7e-026
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = -2 / +2
Query: 882 DVENTDGVHVGGSSKISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRY 703
D NTDG+H+ S+ + + + IGTGDDC+SI + + + I CGPG GIS+G LG+
Sbjct: 2 DSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKD 181
Query: 702 KDEKDVSDITVRNCVLKNTTNGVRIKSY 619
V+ + + LK TTNG+RIK++
Sbjct: 182 NSTGVVTKVILDTAFLKGTTNGLRIKTW 265
Score = 48.3 bits (99), Expect(2) = 7e-026
Identities = 16/48 (33%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 495 RSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVE 352
++ SS + + ++ ++N++GT+++ +AI CS+T PCS + L +V++E
Sbjct: 377 QNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLE 520
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds
Length = 68460
Score = 59.7 bits (124), Expect(6) = 8e-026
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = -2 / +2
Query: 984 TVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
T++ + +NS HI++D+ ++ ++ ++++TAP NTDG+ + S+ I+I+NSTI TG
Sbjct: 49736 TLSNLNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 49915
Score = 40.5 bits (82), Expect(6) = 8e-026
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
SVG LG+ V D+ V+NC T+NG RIK++
Sbjct: 50386 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTF 50493
Score = 38.6 bits (78), Expect(6) = 8e-026
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2 / +1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYA 346
S V + DVT+ NI GTS AI L C C+ + L +N+ A
Sbjct: 50770 SAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINITRA 50907
Score = 37.3 bits (75), Expect(6) = 8e-026
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2 / +2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC++I G + + + CGPG GI
Sbjct: 50201 GDDCIAINNGSSVITITGTFCGPGHGI 50281
Score = 37.3 bits (75), Expect(6) = 8e-026
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2 / +3
Query: 1134 SWIELSHVNNIGITGSGTLDGQGTA 1060
+WI SH+ + I+G GT DGQG +
Sbjct: 42834 AWISFSHIKGLIISGEGTFDGQGAS 42908
Score = 35.0 bits (70), Expect(6) = 8e-026
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -2 / +1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCP 517
A ++T+E+I + EV NP++IDQ + P
Sbjct: 50683 ARNITYEDIILNEVKNPVIIDQAYNP 50760
>gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula cDNA clone pGESD10G3 5' end,
mRNA sequence
Length = 761
Score = 80.3 bits (169), Expect(4) = 2e-025
Identities = 31/88 (35%), Positives = 54/88 (61%)
Frame = -2 / +2
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
+ G+ +N HI + +S+ IT+ +++ +P NTDG+ + + ++I + I +GD
Sbjct: 497 INGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDLTRTIGVNIHDIQIESGD 676
Query: 801 DCVSIGPGCNGVLVDSITCGPGQGISVG 718
DC+++ G V V ++TCGPG GISVG
Sbjct: 677 DCIAVKGGSQFVNVSNVTCGPGHGISVG 760
Score = 39.6 bits (80), Expect(4) = 2e-025
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2 / +2
Query: 1371 TFDISKLGATSDGKTDCTKAVQDAWTSACEATGSATVVIPKG 1246
T ++ GA DG+TD +KA DA+ + C T+V+P G
Sbjct: 89 TLNVIHYGAKGDGRTDDSKAFVDAFKALCGGRYGNTLVVPNG 214
Score = 27.2 bits (53), Expect(4) = 2e-025
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -2 / +2
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKSK 1042
W+ +++ + + GSG ++G G S+ K
Sbjct: 344 WLHFFNISGLTLDGSGVINGNGEGWESREK 433
Score = 25.8 bits (50), Expect(4) = 2e-025
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 1227 LNFTGPCKGSNIAIQ 1183
LNF+GPC NI I+
Sbjct: 239 LNFSGPCYSKNINIK 283
>gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-58p1, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 80270
Score = 48.7 bits (100), Expect(6) = 2e-025
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQK 511
AS +TF+NI ME V+NPI+IDQY+C +
Sbjct: 10353 ASKITFQNILMENVSNPIIIDQYYCDSR 10436
Score = 47.8 bits (98), Expect(6) = 2e-025
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -2 / +3
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
V + +LNS+ HI + + + V APA NTDG+H+ + + I +S I TG
Sbjct: 9015 VRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTG 9191
Score = 46.4 bits (95), Expect(6) = 2e-025
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDV 361
+S V V +++F NI GTS+T E I CS+ PC G+ L ++
Sbjct: 10722 TSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENI 10847
Score = 39.1 bits (79), Expect(6) = 2e-025
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2 / +2
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+GDDC+SI + V + +I+CGPG GI
Sbjct: 9965 SGDDCISIVRNSSRVWIRNISCGPGHGI 10048
Score = 34.1 bits (68), Expect(6) = 2e-025
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG+ + + ++ V L NT NGVRIK++
Sbjct: 10137 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTW 10244
Score = 31.8 bits (63), Expect(6) = 2e-025
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
WI VN++ + G G +DG G +S+S
Sbjct: 8653 WIYFHGVNHLSVEGGGRIDGMGQEWWSRS 8739
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
sequence
Length = 105618
Score = 48.7 bits (100), Expect(6) = 8e-025
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -2 / +3
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQK 511
AS +TF+NI ME V+NPI+IDQY+C +
Sbjct: 72612 ASKITFQNILMENVSNPIIIDQYYCDSR 72695
Score = 47.8 bits (98), Expect(6) = 8e-025
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -2 / +3
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
V + +LNS+ HI + + + V APA NTDG+H+ + + I +S I TG
Sbjct: 71274 VRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTG 71450
Score = 46.4 bits (95), Expect(6) = 8e-025
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2 / +3
Query: 486 SSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDV 361
+S V V +++F NI GTS+T E I CS+ PC G+ L ++
Sbjct: 72981 TSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENI 73106
Score = 39.1 bits (79), Expect(6) = 8e-025
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2 / +2
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+GDDC+SI + V + +I+CGPG GI
Sbjct: 72224 SGDDCISIVRNSSRVWIRNISCGPGHGI 72307
Score = 34.1 bits (68), Expect(6) = 8e-025
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
S+G LG+ + + ++ V L NT NGVRIK++
Sbjct: 72396 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTW 72503
Score = 31.8 bits (63), Expect(6) = 8e-025
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKS 1045
WI VN++ + G G +DG G +S+S
Sbjct: 70912 WIYFHGVNHLSVEGGGRIDGMGQEWWSRS 70998
>gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING DRAFT SEQUENCE, 13 ordered
pieces
Length = 127651
Score = 59.7 bits (124), Expect(6) = 1e-024
Identities = 22/60 (36%), Positives = 42/60 (70%)
Frame = -2 / -2
Query: 984 TVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTG 805
T++ + +NS HI++D+ ++ ++ ++++TAP NTDG+ + S+ I+I+NSTI TG
Sbjct: 115959 TLSNLNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 115780
Score = 40.5 bits (82), Expect(6) = 1e-024
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2 / -1
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
SVG LG+ V D+ V+NC T+NG RIK++
Sbjct: 115309 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTF 115202
Score = 38.6 bits (78), Expect(6) = 1e-024
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2 / -1
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYA 346
S V + DVT+ NI GTS AI L C C+ + L +N+ A
Sbjct: 114925 SAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINITRA 114788
Score = 37.3 bits (75), Expect(6) = 1e-024
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC++I G + + + CGPG GI
Sbjct: 115494 GDDCIAINNGSSVITITGTFCGPGHGI 115414
Score = 37.3 bits (75), Expect(6) = 1e-024
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 1134 SWIELSHVNNIGITGSGTLDGQGTA 1060
+WI SH+ + I+G GT DGQG +
Sbjct: 121347 AWISFSHIKGLIISGEGTFDGQGAS 121273
Score = 35.0 bits (70), Expect(6) = 1e-024
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCP 517
A ++T+E+I + EV NP++IDQ + P
Sbjct: 115012 ARNITYEDIILNEVKNPVIIDQAYNP 114935
>gb|AC144805.7| Medicago truncatula clone mth2-72a11, complete sequence
Length = 78128
Score = 62.9 bits (131), Expect(6) = 1e-022
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = -2 / +3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N + G LNS HI+ID S+ + + +N+TAP + NTDG+ +G SS + I +STI
Sbjct: 55686 NLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYVLIQDSTIA 55865
Query: 810 TG 805
TG
Sbjct: 55866 TG 55871
Score = 41.4 bits (84), Expect(6) = 1e-022
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2 / +3
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDC+++ G + + + +TCGPG GI
Sbjct: 56865 GDDCIAMNNGTSNINITGVTCGPGHGI 56945
Score = 39.1 bits (79), Expect(6) = 1e-022
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = -2 / +2
Query: 483 SHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNV 355
S V + VT+R++ GTS++ +I L C++ C+ + + VN+
Sbjct: 57704 SEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNI 57832
Score = 35.0 bits (70), Expect(6) = 1e-022
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2 / +3
Query: 726 SVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKSY 619
SVG LG + V + V+NC T NG+RIK++
Sbjct: 57039 SVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKTW 57146
Score = 30.4 bits (60), Expect(6) = 1e-022
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYF 523
A +++FE I + E NPI+IDQ +
Sbjct: 57473 ARNISFEQIILTETKNPIIIDQNY 57544
Score = 29.0 bits (57), Expect(6) = 1e-022
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 1131 WIELSHVNNIGITGSGTLDGQGT 1063
WI +++ I I G G +DGQG+
Sbjct: 54099 WIVFYYIHGIIIDGGGQIDGQGS 54167
>gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula cDNA clone GESD-21D12, mRNA
sequence
Length = 724
Score = 104 bits (222), Expect(2) = 2e-022
Identities = 41/121 (33%), Positives = 72/121 (59%)
Frame = -2 / +1
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
+ G+ +N HI + +S+ IT+ +++ +P NTDG+ + + ++I + I +GD
Sbjct: 1 INGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDLTRTIGVNIHDIQIESGD 180
Query: 801 DCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLKNTTNGVRIKS 622
DC+++ G V V ++TCGPG GISVG LG + E+ V +V+NC + V+IK+
Sbjct: 181 DCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKT 360
Query: 621 Y 619
+
Sbjct: 361 W 363
Score = 26.7 bits (52), Expect(2) = 2e-022
Identities = 10/42 (23%), Positives = 16/42 (38%)
Frame = -2 / +1
Query: 387 CSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGSIEALAACL 262
C ++L +N+ + C N GTA I C+
Sbjct: 568 CYNITLNQINITSINRKKPASVKCKNVHGTANDIIAPHGLCV 693
>gb|AC136840.24| Medicago truncatula clone mth2-33n3, complete sequence
Length = 106528
Score = 65.7 bits (137), Expect(4) = 6e-021
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = -2 / -3
Query: 990 NATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIG 811
N TV G+++ NS FH D +S+ V+ + +TAPA NTDG+H+ ++ + I NS +
Sbjct: 581 NLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVS 402
Query: 810 TG 805
G
Sbjct: 401 NG 396
Score = 51.5 bits (106), Expect(4) = 6e-021
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -2 / -1
Query: 807 GDDCVSIGPGCNGVLVDSITCGPGQGI 727
GDDCVSIG GC V + +ITCGPG GI
Sbjct: 301 GDDCVSIGSGCYDVDIKNITCGPGHGI 221
Score = 37.3 bits (75), Expect(4) = 6e-021
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2 / -3
Query: 1365 DISKLGATSDGKTDCTKAVQDAWTSACEATGSATVV 1258
D+ K GA DG TD T++ + AW +AC++ V+
Sbjct: 1841 DVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVI 1734
Score = 31.8 bits (63), Expect(4) = 6e-021
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 1131 WIELSHVNNIGITGSGTLDGQG 1066
W+ VN + + GSGT+DG+G
Sbjct: 944 WLVFYRVNGMSLEGSGTIDGRG 879
>gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo204 similar to polygalacturonase precursor
(pectinase), mRNA sequence
Length = 500
Score = 80.3 bits (169), Expect(3) = 6e-021
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = -2 / +1
Query: 1050 KSKTDNVKAMPNTLVLFHVINATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVEN 871
K+KT+ K P L + + V G+ + N++ H I +S+ + V V +P D N
Sbjct: 118 KNKTNPCKGAPTALTIDTSSSIKVKGLTIQNNQQMHFTISRCDSVRILGVKVASPGDSPN 297
Query: 870 TDGVHVGGSSKISILNSTIGTGDDCVSIGPG 778
TDG+H+ S+ + + + IGTGDDC+SI G
Sbjct: 298 TDGIHISESTNVIVQDCKIGTGDDCISIVNG 390
Score = 32.7 bits (65), Expect(3) = 6e-021
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 774 NGVLVDSITCGPGQGISVGCLGR 706
+ + + I CGPG GIS+G LG+
Sbjct: 395 SNIKMKRIFCGPGHGISIGSLGK 463
Score = 27.6 bits (54), Expect(3) = 6e-021
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -2 / +1
Query: 1131 WIELSHVNNIGITGSGTLDGQGTAVYSKSKTDN 1033
W++ S + GSG +DG G+ ++ S N
Sbjct: 25 WLDFSKLKKAVFQGSGVIDGSGSKWWAASCKKN 123
>gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-29f3, complete sequence
Length = 88313
Score = 51.0 bits (105), Expect(4) = 8e-021
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = -2 / +1
Query: 981 VAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKISILNSTIGTGD 802
V + ++NS+ HI + V +NV+AP+ NTDG+H+ + I I +S + TG+
Sbjct: 63886 VRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIHISATKGIEISHSDVKTGE 64065
Score = 49.2 bits (101), Expect(4) = 8e-021
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = -2 / +2
Query: 528 YFCPQKVCPGKRSNSSHVSVKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDV 361
+FC + +S V V +++F NI GTS++ E I CS+T PC G+ L ++
Sbjct: 64976 FFCKNVIMS*IVMQTSAVQVVNISFINIIGTSASEETIKFACSDTYPCEGLHLENI 65143
Score = 47.3 bits (97), Expect(4) = 8e-021
Identities = 16/29 (55%), Positives = 25/29 (86%)
Frame = -2 / +2
Query: 594 ASHLTFENIRMEEVANPIVIDQYFCPQKV 508
AS++TF++I ME V+NPI+IDQY+C ++
Sbjct: 64613 ASNITFQDIVMENVSNPIIIDQYYCDSRL 64699
Score = 37.3 bits (75), Expect(4) = 8e-021
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 810 TGDDCVSIGPGCNGVLVDSITCGPGQGI 727
+GDDC+SI + V + + +CGPG GI
Sbjct: 64235 SGDDCISIVRNSSQVWIRNFSCGPGHGI 64318
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,117,013,796
Number of Sequences: 392609
Number of extensions: 13201898
Number of successful extensions: 54322
Number of sequences better than 1.0e-020: 43
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 56741976831
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)