TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3670899.2.1
         (555 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC175312.3|  Medicago truncatula strain cultivar Jemalong...   107   2e-034
gb|AC146553.12|  Medicago truncatula clone mth2-9e24, comple...    93   3e-031
gb|AC164395.4|  Medicago truncatula clone mth2-69h11, WORKIN...    93   3e-031

>gb|AC175312.3| Medicago truncatula strain cultivar Jemalong A17 clone mte1-53j20,
             WORKING DRAFT SEQUENCE, 21 unordered pieces
          Length = 113266

 Score =  107 bits (229), Expect(2) = 2e-034
 Identities = 41/73 (56%), Positives = 52/73 (71%)
 Frame = -3 / -2

                                                                         
Query: 538   MYYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVA 359
             MY   PT +GE + V+QPSHEE Q++  N HN+KA  +IYLLS CD +  SA STFGYVA
Sbjct: 85233 MYLNKPTVTGESIGVYQPSHEENQKFGDNLHNKKAWTDIYLLSLCDVLVTSALSTFGYVA 85054

                          
Query: 358   YSFAGVKPWILIR 320
              S  G+KPW+L +
Sbjct: 85053 QSLGGIKPWVLYK 85015




 Score = 59.3 bits (123), Expect(2) = 2e-034
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = -3 / -2

                                                                
Query: 295   DVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFD 143
             D  CV+  S+EPC H PP   C+ K   D+    PY+R C D G G+KL +
Sbjct: 84993 DSPCVQDVSMEPCFHIPPKHDCKEKPLDDIGTTFPYMRRCVDFGSGIKLIN 84841



>gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete sequence
          Length = 136675

 Score = 92.7 bits (196), Expect(2) = 3e-031
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3 / -2

                                                                         
Query: 535   YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
             Y    T SGE++ V+QPS EEQQ++  N HN KA  +IYLLS  D +  +  STFGYVA 
Sbjct: 39288 YMNKSTVSGEVIEVYQPSGEEQQKFNDNKHNMKAWVDIYLLSLSDVLVTTYQSTFGYVAK 39109

                               
Query: 355   SFAGVKPWILIRPDWNRE 302
             +    +PWIL  P ++ E
Sbjct: 39108 ALGNSRPWILYNPVYSNE 39055




 Score = 63.4 bits (132), Expect(2) = 3e-031
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = -3 / -2

                                                                       
Query: 313   WNRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS 140
             +N   S+  C R  ++EPC H PP+  C  K   DV +  PY+RHC+D  FG+KL ++
Sbjct: 39078 YNPVYSNEICEREFTLEPCYHYPPLHYCNGKPIEDVGSSFPYIRHCKDYTFGVKLVNA 38905



>gb|AC164395.4| Medicago truncatula clone mth2-69h11, WORKING DRAFT SEQUENCE, 14
             unordered pieces
          Length = 72356

 Score = 92.7 bits (196), Expect(2) = 3e-031
 Identities = 37/78 (47%), Positives = 49/78 (62%)
 Frame = -3 / +3

                                                                         
Query: 535   YYESPTKSGEIVAVFQPSHEEQQQYTSNDHNQKALAEIYLLSYCDKITMSAWSTFGYVAY 356
             Y    T SGE++ V+QPS EEQQ++  N HN KA  +IYLLS  D +  +  STFGYVA 
Sbjct: 54333 YMNKSTVSGEVIEVYQPSGEEQQKFNDNKHNMKAWVDIYLLSLSDVLVTTYQSTFGYVAK 54512

                               
Query: 355   SFAGVKPWILIRPDWNRE 302
             +    +PWIL  P ++ E
Sbjct: 54513 ALGNSRPWILYNPVYSNE 54566




 Score = 63.4 bits (132), Expect(2) = 3e-031
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = -3 / +3

                                                                       
Query: 313   WNRETSDVACVRSTSVEPCLHSPPILGCRAKTDVDVAAVKPYVRHCEDVGFGLKLFDS 140
             +N   S+  C R  ++EPC H PP+  C  K   DV +  PY+RHC+D  FG+KL ++
Sbjct: 54543 YNPVYSNEICEREFTLEPCYHYPPLHYCNGKPIEDVGSSFPYIRHCKDYTFGVKLVNA 54716



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 413,670,000
Number of Sequences: 392609
Number of extensions: 4498993
Number of successful extensions: 42424
Number of sequences better than 1.0e-020: 5
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 16563123074
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)