TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3642920.2.1
(570 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 179 1e-080
gb|CA917455.1|CA917455 EST641602 GPOD Medicago truncatula c... 157 7e-072
gb|AC148653.1| Medicago truncatula chromosome unknown clone... 133 1e-063
gb|AW686934.1|AW686934 NF004B09RT1F1076 Developing root Med... 133 2e-054
gb|BI309511.1|BI309511 EST530921 GPOD Medicago truncatula c... 134 2e-048
gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-... 103 2e-043
gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula g... 102 6e-043
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 105 2e-040
gb|BF004058.1|BF004058 EST432556 KV1 Medicago truncatula cD... 105 2e-040
gb|CX542306.1|CX542306 s13dNF82C06GS040_467928 Germinating ... 105 2e-040
gb|BQ154784.1|BQ154784 NF108B04IR1F1041 Irradiated Medicago... 104 6e-040
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 107 2e-038
gb|AL370324.1|AL370324 MtBA37B01R1 MtBA Medicago truncatula... 133 1e-035
gb|CG942288.1|CG942288 MBENQ51TR mth2 Medicago truncatula g... 91 5e-035
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 105 2e-034
gb|BF633021.1|BF633021 NF046D08DT1F1074 Drought Medicago tr... 84 2e-034
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 106 1e-033
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 106 1e-033
gb|CF069123.1|CF069123 EST669844 MTUS Medicago truncatula c... 136 4e-033
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 89 6e-033
gb|AW125925.2|AW125925 N100120e rootphos(-) Medicago trunca... 105 8e-031
gb|BI309602.1|BI309602 EST531012 GPOD Medicago truncatula c... 131 1e-029
gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower M... 106 2e-029
gb|DW019011.1|DW019011 EST1227972 MTY Medicago truncatula c... 128 5e-029
gb|CG921816.1|CG921816 MBEJU92TF mth2 Medicago truncatula g... 125 5e-028
gb|CG930164.1|CG930164 MBEIW34TR mth2 Medicago truncatula g... 123 2e-027
gb|BG458116.1|BG458116 NF052F09PL1F1076 Phosphate starved l... 86 3e-027
gb|CG932019.1|CG932019 MBENE12TF mth2 Medicago truncatula g... 87 4e-027
gb|BF644684.1|BF644684 NF019B03EC1F1028 Elicited cell cultu... 122 6e-027
gb|CG975247.1|CG975247 MBEKC71TFB mth2 Medicago truncatula ... 81 2e-025
gb|BQ147450.1|BQ147450 NF040G11FL1F1087 Developing flower M... 81 8e-025
gb|AW691081.2|AW691081 NF037E02ST1F1000 Developing stem Med... 114 1e-024
gb|AW687016.2|AW687016 NF005A09RT1F1068 Developing root Med... 81 4e-024
gb|AW256315.1|AW256315 EST304522 KV2 Medicago truncatula cD... 100 6e-024
gb|BI269401.1|BI269401 NF008D01IR1F1013 Irradiated Medicago... 81 5e-023
gb|AL377152.1|AL377152 MtBB29F12F1 MtBB Medicago truncatula... 93 2e-022
gb|CG922485.1|CG922485 MBELV38TR mth2 Medicago truncatula g... 105 4e-022
emb|CR507534.1| mth4-2O24FM1 BAC end, cultivar Jemalong A17... 105 4e-022
gb|BE319818.2|BE319818 NF022C11RT1F1082 Developing root Med... 105 4e-022
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 105 8e-022
gb|CG951903.1|CG951903 MBEGX92TR mth2 Medicago truncatula g... 87 2e-021
gb|CX539169.1|CX539169 s13dNF60H09GS076_461598 Germinating ... 81 3e-021
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 101 7e-021
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 179 bits (385), Expect(3) = 1e-080
Identities = 72/102 (70%), Positives = 87/102 (85%)
Frame = +3 / -1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HF+L++DNILAASVVV ST++SSLKPE IVFHVITDKKTY MHSWFALN SPAIVEVK
Sbjct: 42434 HFILSTDNILAASVVVTSTVQSSLKPENIVFHVITDKKTYAGMHSWFALNPPSPAIVEVK 42255
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITSANDS 311
G+HQFDWLT+ENVPVLE++E+Q R+ YHG+ T+ +D+
Sbjct: 42254 GIHQFDWLTRENVPVLEAVESQNGIRNYYHGNHVMGTNLSDT 42129
Score = 128 bits (275), Expect(3) = 6e-040
Identities = 64/102 (62%), Positives = 71/102 (69%)
Frame = -3 / +1
Query: 310 LSLALVIGRRLPW*RSLAAR*VSIDSSTGTFSCVNQSN**TPFTSTIAGLREFKANHECM 131
+SL LV PW* L *+S SSTGTFS VNQSN** P TSTIAG F AN EC+
Sbjct: 42130 VSLRLVPIT*FPW**FLIPF*LSTASSTGTFSLVNQSN**MPLTSTIAGEGGFSANQECI 42309
Query: 130 AG*VFLSVITWKTILSGFSDDLIVDLTTTEAARMLSDANTKW 5
*VFLSV+TWKTI SGF DD V++TTTEAA+MLS KW
Sbjct: 42310 PA*VFLSVMTWKTIFSGFRDDCTVEVTTTEAAKMLSVDKIKW 42435
Score = 125 bits (268), Expect(3) = 1e-080
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +3 / -1
Query: 381 IYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRGGDSWVMSKRFRNY 560
+ + +L+P+L+KVVFLDDDVVVQ DLSPLW+IDL+GKVNGAVETCRG D WVMSK FRNY
Sbjct: 41540 VCVEQLYPNLDKVVFLDDDVVVQRDLSPLWEIDLNGKVNGAVETCRGEDEWVMSKHFRNY 41361
Query: 561 LNF 569
NF
Sbjct: 41360 FNF 41352
Score = 84.9 bits (179), Expect(3) = 3e-023
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = -2 / +3
Query: 275 MVTISGSALSFY*FKYRNIFLC*PIKLMNTFHLNNSRTERI*SKP*MHGRIGLFISNNME 96
MV I S L+FY FKYRNIF *P+KLMN F NNSR RI* KP +H R+ F+ ++ME
Sbjct: 42165 MVVIPDSILTFYSFKYRNIFSS*PVKLMNAFDFNNSR*GRI*CKPRVHTRVSFFVGDDME 42344
Query: 95 NNPLRLQ 75
N R Q
Sbjct: 42345 NYIFRFQ 42365
Score = 81.7 bits (172), Expect(2) = 3e-021
Identities = 39/77 (50%), Positives = 51/77 (66%)
Frame = +2 / -3
Query: 68 IITEA*EDCFPCYY**KDLSCHAFMVCFKFSQSCYC*GERCSSI*LVNTRKCSCT*INRN 247
I++E *+ FPC++ K+L +A +VC K S +CYC* +R SS+*LVN RKCS T* R
Sbjct: 42372 IVSET*KYSFPCHHRQKNLRGYALLVCTKSSLTCYC*SQRHSSV*LVN*RKCSGT*SCRK 42193
Query: 248 SARCQRSLPWKSPPNNQ 298
S Q LPW+S NQ
Sbjct: 42192 SKWNQELLPWESCDGNQ 42142
Score = 64.3 bits (134), Expect(3) = 6e-040
Identities = 29/39 (74%), Positives = 30/39 (76%)
Frame = -3 / +1
Query: 568 KFK*FLNLLDITQLSPPLQVSTAPLTFPDRSISQSGDRS 452
K K*FL DIT S PLQVSTAPLTFP RSIS SGD+S
Sbjct: 41353 KLK*FLKCFDITHSSSPLQVSTAPLTFPFRSISHSGDKS 41469
Score = 52.8 bits (109), Expect(3) = 1e-080
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +3 / -1
Query: 300 ANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPEL 398
++ SPR FA+KLQ+ SP Y ++LNHIRIY+PE+
Sbjct: 42137 SDTSPRKFASKLQSRSPKYISLLNHIRIYIPEV 42039
Score = 51.5 bits (106), Expect(3) = 3e-023
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = -2 / +3
Query: 569 KV*IIPEPLRHHPTISTSASLNSAINLPR*INIPKW**VMLDNNIIIKKYDFVEAWEQL 393
K+ I+P+ H+P I SA +S+IN IN P W V L++ I+I+K VE W +L
Sbjct: 41352 KIEIVPKMF*HYPFIFASAGFHSSINFSIQINFP*WRQVTLNHYIVIQKNHLVEVWVKL 41528
Score = 50.1 bits (103), Expect(2) = 3e-021
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +2 / -3
Query: 398 VPKPQQSRIS***CCCPA*PITTLGY*SIWEG*WRC*DLQRWR*LGDV*EVQELFK 565
+PKP+Q * C A* ++T+G *S W+ *W C +LQR R*+G+V ELF+
Sbjct: 41523 LPKPRQGGFFG*RCSGSA*LVSTMGN*SEWKS*WSCGNLQRRR*MGNVKTF*ELFQ 41356
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3 / +1
Query: 394 SGMYIRI*LSTLVYVGLPA*SLAAKTLGL 308
SGMY+RI*LS +Y GL + A GL
Sbjct: 42043 SGMYMRI*LSRDMYFGLLDCNFDANLRGL 42129
Score = 27.6 bits (54), Expect(3) = 6e-040
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2 / +3
Query: 395 LRHVYSNMIEHISICWTSCLKLGSK 321
LR+VY++MIE + WTS L+ K
Sbjct: 42042 LRNVYADMIE*RYVLWTSRLQFRCK 42116
>gb|CA917455.1|CA917455 EST641602 GPOD Medicago truncatula cDNA clone GPOD-36O19, mRNA
sequence
Length = 729
Score = 157 bits (337), Expect(2) = 7e-072
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = +3 / +3
Query: 276 GSRRPITSANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHD 455
GS + + ++ P V AAKLQA SP Y +V+NHIRI++PELFPSLNKVVFLDDD+V+Q D
Sbjct: 453 GSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTD 632
Query: 456 LSPLWDIDLSGKVNGAVETCRGGDSWVMSKR 548
L+PLWDID++GKVNGAVETC G D +VMSKR
Sbjct: 633 LTPLWDIDMNGKVNGAVETCNGEDKFVMSKR 725
Score = 134 bits (288), Expect(2) = 7e-072
Identities = 50/98 (51%), Positives = 72/98 (73%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 180 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 359
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITS 299
+H FDW ++ VPVLE++E + R ++ G I +
Sbjct: 360 ALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVA 473
Score = 77.6 bits (163), Expect(2) = 1e-026
Identities = 41/82 (50%), Positives = 45/82 (54%)
Frame = -3 / -3
Query: 550 NLLDITQLSPPLQVSTAPLTFPDRSISQSGDRSCWXXXXXXXXXXXXXLGNNSGMYIRI* 371
NL DIT LS PL VSTAP TFP S+S G RS LGNNSG IR+
Sbjct: 727 NLFDITNLSSPLHVSTAPFTFPFMSMSHRGVRSVCITMSSSRKTTLLRLGNNSGRCIRMW 548
Query: 370 LSTLVYVGLPA*SLAAKTLGLS 305
T +Y+GL A S AA T G S
Sbjct: 547 FITELYLGLSACSFAAITFGFS 482
Score = 63.4 bits (132), Expect(2) = 1e-026
Identities = 37/80 (46%), Positives = 41/80 (51%)
Frame = -3 / -3
Query: 244 SIDSSTGTFSCVNQSN**TPFTSTIAGLREFKANHECMAG*VFLSVITWKTILSGFSDDL 65
SI S TGTF NQS TS AG + N C+ *VF SVI T L G
Sbjct: 418 SIASKTGTFPFENQSKWCNALTSITAGDKGCNENQACIG**VFRSVIMCITTLLGRKQLR 239
Query: 64 IVDLTTTEAARMLSDANTKW 5
D+ TTEAA LS+A TKW
Sbjct: 238 TSDVATTEAASTLSEAKTKW 179
>gb|AC148653.1| Medicago truncatula chromosome unknown clone mte1-26k20, *** SEQUENCING
IN PROGRESS ***, 11 unordered pieces
Length = 147635
Score = 133 bits (285), Expect(3) = 1e-063
Identities = 52/98 (53%), Positives = 73/98 (74%)
Frame = +3 / -3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV +S +++SL+P ++V H+ITDKKTY +M +WF+L+SLSPAI+EVK
Sbjct: 25464 HFVLASDNVLAASVVAKSLVQNSLQPWKVVLHIITDKKTYNSMQAWFSLHSLSPAIIEVK 25285
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITS 299
+ FDW + V +LE++E + R R+ G I S
Sbjct: 25284 SLQDFDWFREGKVSLLEAMEKDQHVRSRFRGGSSAIIS 25171
Score = 112 bits (240), Expect(3) = 1e-063
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = +3 / -1
Query: 387 MPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRGGDSWVMSKRFRNYLN 566
M +LFPSL+KVVFLD+D+VVQ DLSPLWDID++GKVNGAVETC+G D VMSK ++YLN
Sbjct: 24740 M*QLFPSLDKVVFLDNDIVVQTDLSPLWDIDMNGKVNGAVETCKGKDKRVMSKMLKSYLN 24561
Query: 567 F 569
F
Sbjct: 24560 F 24558
Score = 54.2 bits (112), Expect(3) = 1e-063
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3 / -3
Query: 276 GSRRPITSANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPEL 398
GS I++ + P AAKL+A SPTY++V+NHIRIY+PE+
Sbjct: 25191 GSSAIISNTAEKPEDIAAKLKALSPTYSSVMNHIRIYIPEV 25069
>gb|AW686934.1|AW686934 NF004B09RT1F1076 Developing root Medicago truncatula cDNA clone
NF004B09RT 5', mRNA sequence
Length = 653
Score = 133 bits (285), Expect(2) = 2e-054
Identities = 51/100 (51%), Positives = 70/100 (70%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H VL +DN+LAASVVV ST+ +S PE++VFH++TDKKTY +MH+WFA NS+ A+VEVK
Sbjct: 103 HLVLLTDNVLAASVVVASTLENSFNPEKLVFHIVTDKKTYASMHAWFATNSVESAVVEVK 282
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITSAN 305
G+HQ+DW + N V E +ET Y+ + I +N
Sbjct: 283 GLHQYDWSEEMNAGVKEMLETNHLIWKHYYDKEKNIDYSN 402
Score = 100 bits (213), Expect(2) = 2e-054
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +3 / +1
Query: 327 AKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAV 506
+ L A P+ +++N +RIYMPELFP L K+VFLDDDVVVQHD+S LWD+DL+GKV+G+V
Sbjct: 397 SNLNALRPSSLSLMNQLRIYMPELFPDLKKIVFLDDDVVVQHDISSLWDVDLNGKVSGSV 576
>gb|BI309511.1|BI309511 EST530921 GPOD Medicago truncatula cDNA clone pGPOD-13K9 5' end,
mRNA sequence
Length = 648
Score = 134 bits (288), Expect(2) = 2e-048
Identities = 50/98 (51%), Positives = 72/98 (73%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 222 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 401
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITS 299
+H FDW ++ VPVLE++E + R ++ G I +
Sbjct: 402 ALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVA 515
Score = 79.0 bits (166), Expect(2) = 2e-048
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3 / +3
Query: 276 GSRRPITSANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFL 428
GS + + ++ P V AAKLQA SP Y +V+NHIRI++PELFPSLNKVVFL
Sbjct: 495 GSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFL 647
>gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-45a9, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 125396
Score = 103 bits (219), Expect(2) = 2e-043
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +3 / -1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCR 518
+P Y ++LNH+R Y+PE+FP L K+VFLDDDVVVQ DLS L+ IDL+G VNGAVETC+
Sbjct: 47000 NPKYLSMLNHLRFYIPEIFPELKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETCK 46827
Score = 103 bits (219), Expect(2) = 2e-043
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +3 / -3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCR 518
+P Y ++LNH+R Y+PE+FP L K+VFLDDDVVVQ DLS L+ IDL+G VNGAVETC+
Sbjct: 106014 NPKYLSMLNHLRFYIPEIFPELKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETCK 105841
Score = 93.6 bits (198), Expect(2) = 2e-043
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +3 / -1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HF + SDNI+A SVVV ST ++S P IVFH++TD Y AM +WFA+N V+V+
Sbjct: 47309 HFCVFSDNIIATSVVVNSTAKNSKNPYMIVFHLVTDGINYAAMKTWFAMNDFRGVTVQVQ 47130
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGS 281
F WL VPVL+ ++ R + G+
Sbjct: 47129 KYEDFTWLNASYVPVLKQLQDSEMQRYYFSGN 47034
Score = 93.6 bits (198), Expect(2) = 2e-043
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +3 / -3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HF + SDNI+A SVVV ST ++S P IVFH++TD Y AM +WFA+N V+V+
Sbjct: 106323 HFCVFSDNIIATSVVVNSTAKNSKNPYMIVFHLVTDGINYAAMKTWFAMNDFRGVTVQVQ 106144
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGS 281
F WL VPVL+ ++ R + G+
Sbjct: 106143 KYEDFTWLNASYVPVLKQLQDSEMQRYYFSGN 106048
>gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula genomic clone 78A1, DNA sequence
Length = 914
Score = 102 bits (217), Expect(2) = 6e-043
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = +3 / +1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETC 515
+P Y ++LNH+R Y+PE+FP+L K+VFLDDDVVVQ DLS L+ IDL+G VNGAVETC
Sbjct: 427 NPKYLSMLNHLRFYIPEVFPALKKIVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETC 597
Score = 93.2 bits (197), Expect(2) = 6e-043
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HF + SDNI+A SVV+ ST ++S P IVFH++TD+ Y +M +WFA+N VEV+
Sbjct: 118 HFCVFSDNIIATSVVINSTAKTSKNPNMIVFHLVTDEINYASMKAWFAMNDFRGVTVEVQ 297
Query: 186 GVHQFDWLTQENVPVLESIE 245
F WL VPVL+ ++
Sbjct: 298 KYEDFSWLNASYVPVLKQLQ 357
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 105 bits (225), Expect(2) = 2e-040
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 50097 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 50273
Score = 80.8 bits (170), Expect(2) = 2e-040
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 49779 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 49958
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 49959 AVEDYKFLNSSYVPVLRQLES 50021
>gb|BF004058.1|BF004058 EST432556 KV1 Medicago truncatula cDNA clone pKV1-14O16, mRNA
sequence
Length = 749
Score = 105 bits (225), Expect(2) = 2e-040
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +2
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 401 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 577
Score = 80.8 bits (170), Expect(2) = 2e-040
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +2
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 83 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 262
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 263 AVEDYKFLNSSYVPVLRQLES 325
>gb|CX542306.1|CX542306 s13dNF82C06GS040_467928 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 524
Score = 105 bits (225), Expect(2) = 2e-040
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 339 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 515
Score = 80.8 bits (170), Expect(2) = 2e-040
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 21 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 200
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 201 AVEDYKFLNSSYVPVLRQLES 263
>gb|BQ154784.1|BQ154784 NF108B04IR1F1041 Irradiated Medicago truncatula cDNA clone
NF108B04IR 5', mRNA sequence
Length = 663
Score = 104 bits (222), Expect(2) = 6e-040
Identities = 38/62 (61%), Positives = 51/62 (82%)
Frame = +3 / +2
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRGG 524
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAV+TC G
Sbjct: 425 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVKTCFGS 604
Query: 525 DS 530
S
Sbjct: 605 FS 610
Score = 80.8 bits (170), Expect(2) = 6e-040
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +2
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 107 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 286
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 287 AVEDYKFLNSSYVPVLRQLES 349
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 107 bits (229), Expect(3) = 2e-038
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +3 / -3
Query: 327 AKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAV 506
+ L+ +P Y ++LNH+R Y+PE+FP LNKV+FLDDD+VVQ DL+ LW IDL G VNGAV
Sbjct: 52989 SNLKFRNPKYLSILNHLRFYLPEVFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAV 52810
Query: 507 ETC 515
ETC
Sbjct: 52809 ETC 52801
Score = 58.3 bits (121), Expect(3) = 2e-038
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3 / -3
Query: 93 VFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESI 242
VFH++TD+ Y AM WF +NS A ++V+ + F WL PVL+ +
Sbjct: 53193 VFHIVTDRLNYAAMRMWFLVNSPGKATIQVQNIEDFTWLNASYSPVLKQL 53044
Score = 32.2 bits (64), Expect(3) = 2e-038
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 6 HFVLASDNILAASVVVRSTI 65
H+ + SDNILA +VVV ST+
Sbjct: 53370 HYAIFSDNILATAVVVNSTV 53311
>gb|AL370324.1|AL370324 MtBA37B01R1 MtBA Medicago truncatula cDNA clone MtBA37B01 T7, mRNA
sequence
Length = 544
Score = 133 bits (285), Expect(2) = 1e-035
Identities = 51/100 (51%), Positives = 70/100 (70%)
Frame = +3 / -3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H VL +DN+LAASVVV ST+ +S PE++VFH++TDKKTY +MH+WFA NS+ A+VEVK
Sbjct: 380 HLVLLTDNVLAASVVVASTLENSFNPEKLVFHIVTDKKTYASMHAWFATNSVESAVVEVK 201
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRRPITSAN 305
G+HQ+DW + N V E +ET Y+ + I +N
Sbjct: 200 GLHQYDWSEEMNAGVKEMLETNHLIWKHYYDKEKNIDYSN 81
Score = 37.3 bits (75), Expect(2) = 1e-035
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 327 AKLQAGSPTYTNVLNHIRIYMPELFPSL 410
+ L A P+ +++N +RIYMPELFP L
Sbjct: 86 SNLNALRPSSLSLMNQLRIYMPELFPDL 3
>gb|CG942288.1|CG942288 MBENQ51TR mth2 Medicago truncatula genomic clone 10I5, DNA sequence
Length = 942
Score = 91.3 bits (193), Expect(2) = 5e-035
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ + SDN+LA SVVV ST +++ +PE+ VFH++TDK + AM WF N S A ++V+
Sbjct: 496 HYAIFSDNVLATSVVVNSTAQNANEPEKHVFHIVTDKLNFEAMRMWFLTNPPSKATIDVQ 675
Query: 186 GVHQFDWLTQENVPVLESIETQR 254
+ F WL VL +E+ R
Sbjct: 676 NIDDFKWLNSSYCSVLRQLESAR 744
Score = 77.6 bits (163), Expect(2) = 5e-035
Identities = 26/46 (56%), Positives = 39/46 (84%)
Frame = +3 / +1
Query: 333 LQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLW 470
L+ +P Y ++LNH+R Y+PE++P L+K++FLDDD+VVQ DL+PLW
Sbjct: 805 LKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTPLW 942
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 105 bits (223), Expect(3) = 2e-034
Identities = 37/64 (57%), Positives = 54/64 (84%)
Frame = +3 / -3
Query: 324 AAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGA 503
A+ L+ +P Y ++LNH+R Y+P+++P L+K++FLDDD+VVQ DL+ LW++DL GKVNGA
Sbjct: 87489 ASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGA 87310
Query: 504 VETC 515
VETC
Sbjct: 87309 VETC 87298
Score = 61.1 bits (127), Expect(3) = 2e-034
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3 / -3
Query: 81 PERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIET 248
P + VFH++TDK + AM+ WF LN A + V+ V +F WL PVL +E+
Sbjct: 87708 PSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIYVENVDEFKWLNSSYCPVLRQLES 87541
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3 / -1
Query: 6 HFVLASDNILAASVVVRSTI 65
H+ L SDN+LAASVVV ST+
Sbjct: 87977 HYALFSDNVLAASVVVNSTV 87918
>gb|BF633021.1|BF633021 NF046D08DT1F1074 Drought Medicago truncatula cDNA clone NF046D08DT
5', mRNA sequence
Length = 512
Score = 83.5 bits (176), Expect(2) = 2e-034
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +3 / +3
Query: 330 KLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVE 509
K + P YT+ LN++R Y+P +FP+LNK++ D DVVVQ DLS LW+I+++ K V
Sbjct: 309 KQNSSDPRYTSELNYLRFYLPNIFPTLNKILLFDHDVVVQQDLSTLWNINMNRK*FAGVG 488
Query: 510 TCRGGDS 530
TC+ G++
Sbjct: 489 TCQEGET 509
Score = 83.1 bits (175), Expect(2) = 2e-034
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ + SDN+LA VVV ST+ ++ + E++VFH++T+ +PA+ WF LN A V V+
Sbjct: 84 HYAVFSDNVLACGVVVNSTVSNAKEQEKLVFHIVTNSLNFPAISMWFLLNPSGKATVHVQ 263
Query: 186 GVHQFDWLTQEN 221
+ F+WL++ N
Sbjct: 264 NIDNFEWLSKYN 299
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 106 bits (227), Expect(2) = 1e-033
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3 / +2
Query: 321 FAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNG 500
F +KL+ +P Y ++LNH+R Y+PE+FP L KV+FLDDDVVVQ DL+ LW I L G +NG
Sbjct: 686 FDSKLKFRNPKYLSILNHLRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNING 865
Query: 501 AVETC 515
AVETC
Sbjct: 866 AVETC 880
Score = 57.0 bits (118), Expect(2) = 1e-033
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3 / +2
Query: 93 VFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIET 248
VFH++TD+ Y AM WF N A ++V+ + F WL PVL+ +++
Sbjct: 497 VFHIVTDRLNYAAMRMWFLANPPRKATIQVENIEDFSWLNSSYSPVLKELDS 652
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 106 bits (227), Expect(2) = 1e-033
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3 / +1
Query: 321 FAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNG 500
F +KL+ +P Y ++LNH+R Y+PE+FP L KV+FLDDDVVVQ DL+ LW I L G +NG
Sbjct: 44884 FDSKLKFRNPKYLSILNHLRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNING 45063
Query: 501 AVETC 515
AVETC
Sbjct: 45064 AVETC 45078
Score = 57.0 bits (118), Expect(2) = 1e-033
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3 / +1
Query: 93 VFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIET 248
VFH++TD+ Y AM WF N A ++V+ + F WL PVL+ +++
Sbjct: 44695 VFHIVTDRLNYAAMRMWFLANPPRKATIQVENIEDFSWLNSSYSPVLKELDS 44850
>gb|CF069123.1|CF069123 EST669844 MTUS Medicago truncatula cDNA clone MTUS-16F9, mRNA
sequence
Length = 812
Score = 136 bits (291), Expect(2) = 4e-033
Identities = 50/94 (53%), Positives = 71/94 (75%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 462 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 641
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRYHGSRR 287
+H FDW ++ VPVLE++E + R ++ G R
Sbjct: 642 ALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGHR 743
Score = 26.3 bits (51), Expect(2) = 4e-033
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 291 ITSANDSPRVFAAKLQAGSP 350
+ + ++ P V AAKLQA SP
Sbjct: 749 VANTSEKPNVIAAKLQALSP 808
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 88.6 bits (187), Expect(3) = 6e-033
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +3 / -1
Query: 291 ITSANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLW 470
I + D A ++ + Y ++L++++ Y+PE++P L ++ LDDDVVVQ DL+ LW
Sbjct: 47414 IENQGDKATNDARDMKLRNAKYLSMLDYLQFYLPEMYPKLRNILLLDDDVVVQKDLTGLW 47235
Query: 471 DIDLSGKVNGAVETCRG 521
IDL GKVNGAVE C G
Sbjct: 47234 KIDLDGKVNGAVEICFG 47184
Score = 61.1 bits (127), Expect(3) = 6e-033
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +3 / -1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFAL 152
H+ + SDN++A SVVVRS ++++++P + VFHV+T++ AM WF +
Sbjct: 47681 HYAIFSDNVIAVSVVVRSVVKNAVEPWKHVFHVVTNRMNVAAMKVWFKM 47535
Score = 29.9 bits (59), Expect(3) = 6e-033
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / -1
Query: 168 AIVEVKGVHQFDWLTQENVPVLESIETQR 254
A +E+K V +F +L VPVL +E +
Sbjct: 47516 AFLEIKSVDEFTFLNSSYVPVLRQVEAAK 47430
>gb|AW125925.2|AW125925 N100120e rootphos(-) Medicago truncatula cDNA clone MHRP-2C3, mRNA
sequence
Length = 478
Score = 105 bits (225), Expect(2) = 8e-031
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 237 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 413
Score = 48.7 bits (100), Expect(2) = 8e-031
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3 / +3
Query: 96 FHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIET 248
FHV+TDK AM F L + A +EVK V + +L VPVL +E+
Sbjct: 9 FHVVTDKMNLGAMQVMFKLKDYNGAHIEVKAVEDYKFLNSSYVPVLRQLES 161
>gb|BI309602.1|BI309602 EST531012 GPOD Medicago truncatula cDNA clone pGPOD-13H7 5' end,
mRNA sequence
Length = 755
Score = 131 bits (280), Expect = 1e-029
Identities = 48/89 (53%), Positives = 69/89 (77%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 489 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 668
Query: 186 GVHQFDWLTQENVPVLESIETQRAARDRY 272
+H FDW ++ VPVLE++E + R ++
Sbjct: 669 ALHHFDWFSKGKVPVLEAMEKDQKVRSQF 755
>gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF012D10FL 5', mRNA sequence
Length = 685
Score = 106 bits (226), Expect(2) = 2e-029
Identities = 37/64 (57%), Positives = 54/64 (84%)
Frame = +3 / +3
Query: 324 AAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGA 503
A+ ++ +P Y ++LNH+R Y+PE++P L+K++FLDDD+VVQ DL+ LW++DL GKVNGA
Sbjct: 195 ASNMKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWEVDLQGKVNGA 374
Query: 504 VETC 515
VETC
Sbjct: 375 VETC 386
Score = 43.7 bits (89), Expect(2) = 2e-029
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3 / +3
Query: 114 KKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIETQR 254
K + AM+ WF LN A + V+ V F WL PVL +E+ +
Sbjct: 3 KLNFGAMNMWFLLNPPGKATIHVQNVDDFKWLNSSYCPVLRQLESAK 143
>gb|DW019011.1|DW019011 EST1227972 MTY Medicago truncatula cDNA clone MTYBD75, mRNA
sequence
Length = 200
Score = 128 bits (275), Expect = 5e-029
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +3 / +1
Query: 93 VFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQENVPVLESIETQRAARDRY 272
VFHVITDKKTY MHSWFALNS SPA+VE+KG+HQFDWLT+ENVPVLE+++ Q RD Y
Sbjct: 10 VFHVITDKKTYAGMHSWFALNSASPAVVEIKGIHQFDWLTRENVPVLEAVQNQNGIRDYY 189
Query: 273 HGS 281
HG+
Sbjct: 190 HGN 198
>gb|CG921816.1|CG921816 MBEJU92TF mth2 Medicago truncatula genomic clone 71O15, DNA
sequence
Length = 875
Score = 125 bits (268), Expect = 5e-028
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +3 / -1
Query: 381 IYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRGGDSWVMSKRFRNY 560
+ + +L+P+L+KVVFLDDDVVVQ DLSPLW+IDL+GKVNGAVETCRG D WVMSK FRNY
Sbjct: 794 VCVEQLYPNLDKVVFLDDDVVVQRDLSPLWEIDLNGKVNGAVETCRGEDEWVMSKHFRNY 615
Query: 561 LNF 569
NF
Sbjct: 614 FNF 606
>gb|CG930164.1|CG930164 MBEIW34TR mth2 Medicago truncatula genomic clone 65F19, DNA
sequence
Length = 910
Score = 123 bits (264), Expect = 2e-027
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +3 / +2
Query: 372 HIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRGGDSWVMSKRF 551
++ ++ +LFP+L+KVVFLDDDVV+Q DLS LW+IDL GKVNGAVETCRG D WVMSK F
Sbjct: 653 YMSCFVKQLFPNLDKVVFLDDDVVIQRDLSALWEIDLEGKVNGAVETCRGEDDWVMSKHF 832
Query: 552 RNYLNF 569
RNY NF
Sbjct: 833 RNYFNF 850
>gb|BG458116.1|BG458116 NF052F09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF052F09PL 5', mRNA sequence
Length = 671
Score = 85.8 bits (181), Expect(3) = 3e-027
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +3 / +1
Query: 291 ITSANDSPRVFAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLW 470
I + D A ++ + Y ++L++++ Y+PE++P L ++ LDDDVVVQ DL+ LW
Sbjct: 241 IENQGDKATNDARDMKLRNAKYLSMLDYLQFYLPEMYPKLRNILLLDDDVVVQKDLTGLW 420
Query: 471 DIDLSGKVNGAVETCRG 521
IDL GKVNGAV C G
Sbjct: 421 KIDLDGKVNGAVXICFG 471
Score = 44.6 bits (91), Expect(3) = 3e-027
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3 / +1
Query: 42 SVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFAL 152
SVVVRS ++++++P + VFHV+T++ AM WF +
Sbjct: 10 SVVVRSVVKNAVEPWKHVFHVVTNRMNVAAMKVWFKM 120
Score = 29.9 bits (59), Expect(3) = 3e-027
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 168 AIVEVKGVHQFDWLTQENVPVLESIETQR 254
A +E+K V +F +L VPVL +E +
Sbjct: 139 AFLEIKSVDEFTFLNSSYVPVLRQVEAAK 225
>gb|CG932019.1|CG932019 MBENE12TF mth2 Medicago truncatula genomic clone 7A23, DNA sequence
Length = 691
Score = 87.2 bits (184), Expect(2) = 4e-027
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = +3 / +1
Query: 330 KLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVE 509
K + P YT+ LN++R Y+P +FP+LNK++ D DVVVQ DLS LW+I+++ KV V
Sbjct: 148 KQNSSDPRYTSELNYLRFYLPNIFPTLNKILLFDHDVVVQQDLSTLWNINMNRKVIAGVG 327
Query: 510 TCRGGDS 530
TC+ G++
Sbjct: 328 TCQEGET 348
Score = 55.1 bits (114), Expect(2) = 4e-027
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3 / +1
Query: 84 ERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVKGVHQFDWLTQEN 221
E++VFH++T+ +PA+ WF LN A V V+ + F+WL+ N
Sbjct: 1 EKLVFHIVTNSLNFPAISMWFLLNPSGKATVHVQNIDNFEWLSNYN 138
>gb|BF644684.1|BF644684 NF019B03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF019B03EC 5', mRNA sequence
Length = 676
Score = 122 bits (260), Expect = 6e-027
Identities = 45/78 (57%), Positives = 61/78 (78%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 432 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 611
Query: 186 GVHQFDWLTQENVPVLES 239
+H FDW ++ VPV S
Sbjct: 612 ALHHFDWFSKGKVPVFRS 665
>gb|CG975247.1|CG975247 MBEKC71TFB mth2 Medicago truncatula genomic clone 72L21, DNA
sequence
Length = 849
Score = 80.8 bits (170), Expect(3) = 2e-025
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 420 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 599
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 600 AVEDYKFLNSSYVPVLRQLES 662
Score = 46.9 bits (96), Expect(3) = 2e-025
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVF 425
+P Y ++LNH+R Y+PE++P L+KV+F
Sbjct: 738 NPKYLSILNHLRFYLPEMYPKLHKVLF 818
Score = 26.7 bits (52), Expect(3) = 2e-025
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 414 KVVFLDDDVVVQHD 455
K FLDDD+VVQ D
Sbjct: 808 KFYFLDDDIVVQKD 849
>gb|BQ147450.1|BQ147450 NF040G11FL1F1087 Developing flower Medicago truncatula cDNA clone
NF040G11FL 5', mRNA sequence
Length = 701
Score = 80.8 bits (170), Expect(2) = 8e-025
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 262 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 441
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 442 AVEDYKFLNSSYVPVLRQLES 504
Score = 53.8 bits (111), Expect(2) = 8e-025
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +3 / +1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLS 461
+P Y ++LNH+R Y+PE++P L+KV F +VVQ DL+
Sbjct: 580 NPKYLSILNHLRFYLPEMYPKLHKVYFWMMTIVVQKDLT 696
>gb|AW691081.2|AW691081 NF037E02ST1F1000 Developing stem Medicago truncatula cDNA clone
NF037E02ST 5', mRNA sequence
Length = 517
Score = 114 bits (243), Expect = 1e-024
Identities = 41/70 (58%), Positives = 57/70 (81%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HFVLASDN+LAASVV S +R+ L+P ++V H+ITD+KTY M +WF+L+ LSPA++EVK
Sbjct: 232 HFVLASDNVLAASVVATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVK 411
Query: 186 GVHQFDWLTQ 215
+H FDW ++
Sbjct: 412 ALHHFDWFSK 441
>gb|AW687016.2|AW687016 NF005A09RT1F1068 Developing root Medicago truncatula cDNA clone
NF005A09RT 5', mRNA sequence
Length = 582
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 177 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 356
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 357 AVEDYKFLNSSYVPVLRQLES 419
Score = 51.5 bits (106), Expect(2) = 4e-024
Identities = 16/29 (55%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLD 431
+P Y ++LNH+R Y+PE++P L+KV+FLD
Sbjct: 495 NPKYLSILNHLRFYLPEMYPKLHKVLFLD 581
>gb|AW256315.1|AW256315 EST304522 KV2 Medicago truncatula cDNA clone KV2-4E2, mRNA sequence
Length = 341
Score = 100 bits (213), Expect(2) = 6e-024
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +3 / +2
Query: 327 AKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAV 506
+ L A P+ +++N +RIYMPELFP L K+VFLDDDVVVQHD+S LWD+DL+GKV+G+V
Sbjct: 110 SNLNALRPSSLSLMNQLRIYMPELFPDLKKIVFLDDDVVVQHDISSLWDVDLNGKVSGSV 289
Score = 30.4 bits (60), Expect(2) = 6e-024
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3 / +2
Query: 192 HQFDWLTQENVPVLESIETQRAARDRYHGSRRPITSAN 305
HQ+DW N V E +ET Y+ + I +N
Sbjct: 2 HQYDWSEDMNAGVKEMLETNHLIWKHYYDKEKNIDYSN 115
>gb|BI269401.1|BI269401 NF008D01IR1F1013 Irradiated Medicago truncatula cDNA clone
NF008D01IR 5', mRNA sequence
Length = 511
Score = 80.8 bits (170), Expect(2) = 5e-023
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 108 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 287
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 288 AVEDYKFLNSSYVPVLRQLES 350
Score = 47.8 bits (98), Expect(2) = 5e-023
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFL 428
+P Y ++LNH+R Y+PE++P L KV+FL
Sbjct: 426 NPKYLSILNHLRFYLPEMYPKLXKVLFL 509
>gb|AL377152.1|AL377152 MtBB29F12F1 MtBB Medicago truncatula cDNA clone MtBB29F12 T3, mRNA
sequence
Length = 427
Score = 93.2 bits (197), Expect(2) = 2e-022
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +3 / +3
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
HF + SDNI+A SVV+ ST ++S P IVFH++TD+ Y +M +WFA+N VEV+
Sbjct: 60 HFCVFSDNIIATSVVINSTAKTSKNPNMIVFHLVTDEINYASMKAWFAMNDFRGVTVEVQ 239
Query: 186 GVHQFDWLTQENVPVLESIE 245
F WL VPVL+ ++
Sbjct: 240 KYEDFSWLNASYVPVLKQLQ 299
Score = 33.6 bits (67), Expect(2) = 2e-022
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELF 401
+P Y ++LNH+R Y+PE+F
Sbjct: 369 NPKYLSMLNHLRFYIPEVF 425
>gb|CG922485.1|CG922485 MBELV38TR mth2 Medicago truncatula genomic clone 83G4, DNA sequence
Length = 944
Score = 105 bits (225), Expect = 4e-022
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 40 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 216
>emb|CR507534.1| mth4-2O24FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 605
Score = 105 bits (225), Expect = 4e-022
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +3
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 45 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 221
>gb|BE319818.2|BE319818 NF022C11RT1F1082 Developing root Medicago truncatula cDNA clone
NF022C11RT 5', mRNA sequence
Length = 552
Score = 105 bits (225), Expect = 4e-022
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +3 / +1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y ++LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAVETC G
Sbjct: 91 NPKYLSILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVETCFG 267
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 105 bits (223), Expect = 8e-022
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = +3 / -3
Query: 321 FAAKLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNG 500
F +KL+ +P Y ++LNH R Y+PE+FP L KV+FLDDDVVVQ DL+ LW I L G +NG
Sbjct: 814 F*SKLKFRNPKYLSILNHFRFYLPEIFPKLKKVLFLDDDVVVQKDLTDLWSITLKGNING 635
Query: 501 AVETC 515
AVETC
Sbjct: 634 AVETC 620
>gb|CG951903.1|CG951903 MBEGX92TR mth2 Medicago truncatula genomic clone 53P16, DNA
sequence
Length = 726
Score = 87.2 bits (184), Expect(2) = 2e-021
Identities = 32/67 (47%), Positives = 48/67 (71%)
Frame = +3 / +2
Query: 330 KLQAGSPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVE 509
K + P YT+ LN++R Y+P +FP+LNK++ D DVVVQ DLS LW+I+++ KV V
Sbjct: 173 KQNSSDPRYTSELNYLRFYLPNIFPTLNKILLFDHDVVVQQDLSTLWNINMNRKVIAGVG 352
Query: 510 TCRGGDS 530
TC+ G++
Sbjct: 353 TCQEGET 373
Score = 37.7 bits (76), Expect(2) = 2e-021
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 84 ERIVFHVITDKKTYPAMHSWFALN 155
E++VFH++T+ +PA+ WF LN
Sbjct: 25 EKLVFHIVTNSLNFPAISMWFLLN 96
>gb|CX539169.1|CX539169 s13dNF60H09GS076_461598 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 532
Score = 80.8 bits (170), Expect(2) = 3e-021
Identities = 35/81 (43%), Positives = 50/81 (61%)
Frame = +3 / +1
Query: 6 HFVLASDNILAASVVVRSTIRSSLKPERIVFHVITDKKTYPAMHSWFALNSLSPAIVEVK 185
H+ L SDN++AASVVV S +++ +P + VFHV+TDK AM F L + A +EVK
Sbjct: 142 HYALFSDNVVAASVVVNSATKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKDYNGAHIEVK 321
Query: 186 GVHQFDWLTQENVPVLESIET 248
V + +L VPVL +E+
Sbjct: 322 AVEDYKFLNSSYVPVLRQLES 384
Score = 41.8 bits (85), Expect(2) = 3e-021
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +3 / +1
Query: 345 SPTYTNVLNHIRIYMPELFPSLNK 416
+P Y ++LNH+R Y+PE++P L+K
Sbjct: 460 NPKYLSILNHLRFYLPEMYPKLHK 531
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 101 bits (216), Expect = 7e-021
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +3 / +2
Query: 345 SPTYTNVLNHIRIYMPELFPSLNKVVFLDDDVVVQHDLSPLWDIDLSGKVNGAVETCRG 521
+P Y +LNH+R Y+PE++P L+KV+FLDDD+VVQ DL+ LW ID+ GKVNGAV TC G
Sbjct: 140 NPKYLAILNHLRFYLPEMYPKLHKVLFLDDDIVVQKDLTGLWKIDMDGKVNGAVXTCFG 316
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 572,081,986
Number of Sequences: 392609
Number of extensions: 7944584
Number of successful extensions: 42100
Number of sequences better than 1.0e-020: 54
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 17195303344
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)