TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336950.2.1
(645 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula c... 187 6e-065
gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower M... 187 2e-061
gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell cultu... 187 3e-060
gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cD... 163 6e-058
gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula ... 182 7e-053
gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Med... 181 1e-052
gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medi... 206 2e-052
gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Med... 187 1e-050
gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago tr... 178 6e-049
gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmo... 187 2e-048
gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Med... 171 3e-046
gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula c... 183 2e-045
gb|AC141107.5| Medicago truncatula clone mth2-34a12, comple... 119 4e-043
gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmo... 106 5e-041
gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating ... 100 3e-039
gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infect... 161 7e-039
gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell cultu... 112 7e-037
gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cD... 92 1e-036
gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-... 55 3e-028
>gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula cDNA clone pGPOD-2L19 5' end,
mRNA sequence
Length = 808
Score = 187 bits (402), Expect(2) = 6e-065
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -1 / +2
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 209 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 388
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 389 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 556
Score = 122 bits (260), Expect(2) = 2e-035
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 555 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 376
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 375 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 247
Score = 82.2 bits (173), Expect(2) = 6e-065
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VSLT SNG
Sbjct: 563 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 703
Score = 48.7 bits (100), Expect(2) = 2e-035
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2 / -2
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
T L FP S+FMPQ PGL*TPTP VGQ+ + R+
Sbjct: 642 TTLYFFPCSIFMPQKPGL*TPTPSVGQVPSHNTSNRS 532
>gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower Medicago truncatula cDNA clone
NF065D12FL 5', mRNA sequence
Length = 664
Score = 187 bits (402), Expect(2) = 2e-061
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -1 / +2
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 188 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 367
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 368 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 535
Score = 122 bits (260), Expect(2) = 2e-035
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 534 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 355
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 354 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 226
Score = 70.7 bits (148), Expect(2) = 2e-061
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVS 19
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VS
Sbjct: 542 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVS 664
Score = 48.7 bits (100), Expect(2) = 2e-035
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2 / -2
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
T L FP S+FMPQ PGL*TPTP VGQ+ + R+
Sbjct: 621 TTLYFFPCSIFMPQKPGL*TPTPSVGQVPSHNTSNRS 511
>gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF068B09EC 5', mRNA sequence
Length = 652
Score = 187 bits (402), Expect(2) = 3e-060
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 180 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 359
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 360 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 527
Score = 122 bits (260), Expect(2) = 2e-035
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -1
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 526 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 347
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 346 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 218
Score = 66.6 bits (139), Expect(2) = 3e-060
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKS 46
CPT GVGVYNPGFWGMNIE+GK Y V + +S
Sbjct: 534 CPTDGVGVYNPGFWGMNIEQGKKYKXVFYARS 629
Score = 48.3 bits (99), Expect(2) = 2e-035
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2 / -1
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
T L FP S+FMPQ PGL*TPTP VGQ+ + R+
Sbjct: 613 TXLYFFPCSIFMPQXPGL*TPTPSVGQVPSHNTSNRS 503
>gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cDNA clone KV3-51D17, mRNA
sequence
Length = 469
Score = 163 bits (351), Expect(2) = 6e-058
Identities = 65/80 (81%), Positives = 73/80 (91%)
Frame = -1 / -2
Query: 384 RKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVET 205
R+IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAGG + PSNIDPWSIIG+ + + VET
Sbjct: 456 RRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVET 277
Query: 204 DRTSCFSRNIVALRMEVLCD 145
DRTSCF RN VALR+EVLCD
Sbjct: 276 DRTSCFERNKVALRLEVLCD 217
Score = 110 bits (234), Expect(2) = 6e-032
Identities = 51/78 (65%), Positives = 57/78 (73%)
Frame = +2 / +2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 218 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 397
Query: 326 APAWLISSKKIPNSVSGI 379
APA LISSK IP VSGI
Sbjct: 398 APA*LISSKNIPKRVSGI 451
Score = 82.2 bits (173), Expect(2) = 6e-058
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / -2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VSLT SNG
Sbjct: 210 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 70
Score = 48.7 bits (100), Expect(2) = 6e-032
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2 / +2
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
T L FP S+FMPQ PGL*TPTP VGQ+ + R+
Sbjct: 131 TTLYFFPCSIFMPQKPGL*TPTPSVGQVPSHNTSNRS 241
>gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula cDNA clone mt--acc955200a10,
mRNA sequence
Length = 565
Score = 182 bits (393), Expect(2) = 7e-053
Identities = 75/104 (72%), Positives = 86/104 (82%)
Frame = -1 / +1
Query: 456 KCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAG 277
+C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+WAELVSNRGFEAG
Sbjct: 97 QCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAG 276
Query: 276 GLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
G + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 277 GPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 408
Score = 122 bits (260), Expect(2) = 1e-032
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -3
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 407 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 228
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 227 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 99
Score = 46.0 bits (94), Expect(2) = 7e-053
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 141 CPTGGVGVYNPGFWGM 94
CPT GVGVYNPGFWGM
Sbjct: 415 CPTDGVGVYNPGFWGM 462
Score = 39.1 bits (79), Expect(2) = 1e-032
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2 / -3
Query: 86 SMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
S+ MPQ PGL*TPTP VGQ+ + R+
Sbjct: 470 SLTMPQKPGL*TPTPSVGQVPSHNTSNRS 384
>gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF023D01ST 5', mRNA sequence
Length = 634
Score = 181 bits (390), Expect(2) = 1e-052
Identities = 75/116 (64%), Positives = 91/116 (78%)
Frame = -1 / +1
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 187 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 366
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSN GFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VAL +EVLCD
Sbjct: 367 AELVSNXGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALXLEVLCD 534
Score = 120 bits (256), Expect(2) = 2e-031
Identities = 59/103 (57%), Positives = 67/103 (65%)
Frame = +2 / -3
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNP LLTSSAH PP
Sbjct: 533 SHNTSNXSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPXLLTSSAHNPP 354
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 353 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 225
Score = 46.4 bits (95), Expect(2) = 1e-052
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1 / +2
Query: 138 PTGGVGVYNPGFWGMNI 88
PT GVGVYNPGFWGMNI
Sbjct: 545 PTDGVGVYNPGFWGMNI 595
Score = 36.8 bits (74), Expect(2) = 2e-031
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / -2
Query: 89 MFMPQNPGL*TPTPPVG 139
+FMPQ PGL*TPTP VG
Sbjct: 594 IFMPQXPGL*TPTPSVG 544
>gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF027B07NR 5', mRNA sequence
Length = 651
Score = 206 bits (445), Expect = 2e-052
Identities = 85/155 (54%), Positives = 111/155 (71%)
Frame = -1 / +2
Query: 483 FLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAEL 304
FL+L I +A + A + ++ + R +P+TLFGIF+EEINHAG+GGIWA+L
Sbjct: 50 FLWLYLIIVSFVAFQCNANGSQISSLVVNAAQGRPMPNTLFGIFYEEINHAGSGGIWAQL 229
Query: 303 VSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGV 124
V+N GFEA G TPSNI PW+IIG +SSV ++T+ +SCF RN VALRM+VLCD CP GV
Sbjct: 230 VNNSGFEAAGTRTPSNIFPWTIIGTESSVKLQTELSSCFERNKVALRMDVLCDKCPPDGV 409
Query: 123 GVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVS 19
GV NPGFWGMNI +GK Y +V F +S + D+ V+
Sbjct: 410 GVSNPGFWGMNIVQGKKYKVVFFYRSLGSLDMRVA 514
Score = 134 bits (287), Expect = 1e-030
Identities = 61/106 (57%), Positives = 72/106 (67%)
Frame = +2 / -1
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMM 241
T L FP ++FMPQ PGL TPTP G LS TSIL AT+ R K ++ SV + T++S P+M
Sbjct: 471 TTLYFFPCTIFMPQKPGLETPTPSGGHLSHNTSILNATLLRSKQELSSVCSLTDDSVPIM 292
Query: 242 DHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGI 379
G +FDGV P ASNP L TS AH+PP PAWLISS IP V GI
Sbjct: 291 VQGKIFDGVRVPAASNPELFTS*AHIPPDPAWLISS*NIPKRVLGI 154
>gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Medicago truncatula cDNA clone
NF091D12ST 5', mRNA sequence
Length = 628
Score = 187 bits (402), Expect(2) = 1e-050
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -1 / +2
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 236 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 415
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 416 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 583
Score = 122 bits (260), Expect(2) = 9e-030
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 582 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 403
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 402 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 274
Score = 34.5 bits (69), Expect(2) = 1e-050
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGF 103
CPT GVGVYNPG+
Sbjct: 590 CPTDGVGVYNPGY 628
Score = 29.5 bits (58), Expect(2) = 9e-030
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 107 PGL*TPTPPVGQLSQRTSILRA 172
PGL*TPTP VGQ+ + R+
Sbjct: 624 PGL*TPTPSVGQVPSHNTSNRS 559
>gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago truncatula cDNA clone NF011E06DT
5', mRNA sequence
Length = 621
Score = 178 bits (383), Expect(2) = 6e-049
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 207 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 386
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEV 154
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EV
Sbjct: 387 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEV 545
Score = 120 bits (256), Expect(2) = 2e-029
Identities = 59/100 (59%), Positives = 67/100 (67%)
Frame = +2 / -3
Query: 155 TSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPA 334
TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PPAPA
Sbjct: 544 TSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA 365
Query: 335 WLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
LISSK IP VSGI EAST VA A T ++H
Sbjct: 364 *LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 245
Score = 37.3 bits (75), Expect(2) = 6e-049
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFW 100
CPT GVGV NPGFW
Sbjct: 560 CPTDGVGVXNPGFW 601
Score = 30.4 bits (60), Expect(2) = 2e-029
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / -1
Query: 101 QNPGL*TPTPPVGQLSQRT 157
Q PGL TPTP VGQ+ T
Sbjct: 600 QXPGLXTPTPSVGQVPSHT 544
>gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 437
Score = 187 bits (402), Expect(2) = 2e-048
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 54 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 233
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 234 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 401
Score = 122 bits (260), Expect(2) = 5e-028
Identities = 60/103 (58%), Positives = 68/103 (66%)
Frame = +2 / -2
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 400 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 221
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 220 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 92
Score = 27.2 bits (53), Expect(2) = 2e-048
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 141 CPTGGVGVYN 112
CPT GVGVYN
Sbjct: 408 CPTDGVGVYN 437
Score = 23.5 bits (45), Expect(2) = 5e-028
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2 / -2
Query: 113 L*TPTPPVGQLSQRTSILRA 172
L*TPTP VGQ+ + R+
Sbjct: 436 L*TPTPSVGQVPSHNTSNRS 377
>gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Medicago truncatula cDNA clone
NF069E04ST 5', mRNA sequence
Length = 604
Score = 171 bits (367), Expect(2) = 3e-046
Identities = 71/109 (65%), Positives = 86/109 (78%)
Frame = -1 / +2
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 209 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 388
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVAL 166
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VAL
Sbjct: 389 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVAL 535
Score = 118 bits (253), Expect(2) = 1e-029
Identities = 57/95 (60%), Positives = 65/95 (68%)
Frame = +2 / -2
Query: 170 ATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISS 349
AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PPAPA LISS
Sbjct: 531 ATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA*LISS 352
Query: 350 KKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
K IP VSGI EAST VA A T ++H
Sbjct: 351 KNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 247
Score = 35.9 bits (72), Expect(2) = 3e-046
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGF 103
CPT GVGVYNPGF
Sbjct: 564 CPTDGVGVYNPGF 602
Score = 32.2 bits (64), Expect(2) = 1e-029
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 101 QNPGL*TPTPPVGQL 145
+NPGL*TPTP VGQ+
Sbjct: 604 RNPGL*TPTPSVGQV 560
>gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula cDNA clone MTUS-14H2, mRNA
sequence
Length = 530
Score = 183 bits (395), Expect = 2e-045
Identities = 76/116 (65%), Positives = 92/116 (79%)
Frame = -1 / +1
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 151 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 330
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN ALR+EVLCD
Sbjct: 331 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKGALRLEVLCD 498
Score = 119 bits (254), Expect = 5e-026
Identities = 59/103 (57%), Positives = 67/103 (65%)
Frame = +2 / -1
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPP 325
S TS A + R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PP
Sbjct: 497 SHNTSNRSAPLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPP 318
Query: 326 APAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
APA LISSK IP VSGI EAST VA A T ++H
Sbjct: 317 APA*LISSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 189
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
Length = 142659
Score = 119 bits (254), Expect(3) = 2e-037
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1 / +3
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYN 112
GFEA G TPSNI PW+IIG +SSV ++T+ +SCF RN VALRM+VLCD CP GVGV N
Sbjct: 88821 GFEAAGTRTPSNIFPWTIIGTESSVKLQTELSSCFERNKVALRMDVLCDKCPPDGVGVSN 89000
Query: 111 PGFWGM 94
PGFWGM
Sbjct: 89001 PGFWGM 89018
Score = 117 bits (250), Expect(3) = 1e-032
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = -1 / +3
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYN 112
GFEAGG PSN PW+I+G ++++ VET+ +SCF RN VALRM+VLCDNCP GVG+ N
Sbjct: 72546 GFEAGGKKMPSNFAPWTIVGTETTIHVETELSSCFERNKVALRMDVLCDNCPFDGVGISN 72725
Query: 111 PGFWGM 94
PG+WGM
Sbjct: 72726 PGYWGM 72743
Score = 108 bits (230), Expect(2) = 6e-027
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = -1 / +3
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYN 112
GFEAGG PSN DPW+I+G ++ + V T+ +S F RN VALR++VLCDNCP GVG+ N
Sbjct: 61557 GFEAGGTQVPSNFDPWAIVGTEADIHVVTELSSSFERNKVALRIDVLCDNCPVDGVGISN 61736
Query: 111 PGFWGM 94
PGF GM
Sbjct: 61737 PGFKGM 61754
Score = 92.3 bits (195), Expect(5) = 4e-043
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -1 / +2
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
GFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 54917 GFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 55063
Score = 84.5 bits (178), Expect(3) = 3e-021
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +2 / -3
Query: 95 MPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWR 274
MPQ PGL TPTP G LS TSIL AT+ R K ++ SV + T++S P+M G +FDGV
Sbjct: 89017 MPQKPGLETPTPSGGHLSHNTSILNATLLRSKQELSSVCSLTDDSVPIMVQGKIFDGVRV 88838
Query: 275 PPASNP 292
P ASNP
Sbjct: 88837 PAASNP 88820
Score = 54.7 bits (113), Expect(5) = 4e-043
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFE 346
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFE
Sbjct: 54273 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFE 54419
Score = 49.6 bits (102), Expect(5) = 4e-043
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -1 / +3
Query: 348 EEINHAGAGGIWAELVSNRG 289
+EINHAGAGG+WAELVSNRG
Sbjct: 54738 QEINHAGAGGLWAELVSNRG 54797
Score = 46.9 bits (96), Expect(3) = 1e-032
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = -1 / +2
Query: 348 EEINHAGAGGIWAELVSNRG 289
+EINHAGAGG+W+ELV+NRG
Sbjct: 72107 QEINHAGAGGLWSELVNNRG 72166
Score = 46.0 bits (94), Expect(5) = 4e-043
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGM 94
CPT GVGVYNPGFWGM
Sbjct: 55070 CPTDGVGVYNPGFWGM 55117
Score = 43.7 bits (89), Expect(3) = 2e-037
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -1 / +3
Query: 348 EEINHAGAGGIWAELVSNRG 289
+EINHAG+GGIWA+LV+N G
Sbjct: 88683 QEINHAGSGGIWAQLVNNSG 88742
Score = 43.2 bits (88), Expect(2) = 6e-027
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -1 / +2
Query: 348 EEINHAGAGGIWAELVSNRG 289
+E+N AG GGIW+ELVSNRG
Sbjct: 61160 QEVNRAGTGGIWSELVSNRG 61219
Score = 39.6 bits (80), Expect(3) = 3e-021
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2 / -3
Query: 290 PLLLTSSAHMPPAPAWLISSK 352
PLLLTSSAH PPAPA LIS +
Sbjct: 54796 PLLLTSSAHNPPAPA*LISCR 54734
Score = 39.1 bits (79), Expect(5) = 4e-043
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1 / +2
Query: 93 NIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
NIE+GK Y +V + +S +L VSLT SNG
Sbjct: 55346 NIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 55438
Score = 34.1 bits (68), Expect(3) = 3e-021
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2 / -3
Query: 338 LISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARH 454
+++SK IP VSGI EAST VA A T ++H
Sbjct: 54427 ILTSKNIPKRVSGIRLPDA*EASTTSVAFKSACTCTSKH 54311
Score = 32.7 bits (65), Expect(3) = 1e-032
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1 / +2
Query: 483 FLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINH 334
FL L I +A + A T + + R +PDTLFG+F+E N+
Sbjct: 71702 FLRLCLIIVSFIAFQCNADGGQTSTLVVNAAQGRPMPDTLFGVFYEVGNY 71851
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1 / +1
Query: 483 FLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINH 334
FL+L I +A + A + ++ + R +P+TLFGIF+E N+
Sbjct: 88429 FLWLYLIIVSFVAFQCNANGSQISSLVVNAAQGRPMPNTLFGIFYEVGNY 88578
>gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 505
Score = 106 bits (227), Expect(2) = 5e-041
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -1 / +3
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 9 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 176
Score = 82.2 bits (173), Expect(2) = 5e-041
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / +3
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VSLT SNG
Sbjct: 183 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 323
Score = 73.5 bits (154), Expect(2) = 4e-021
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2 / -1
Query: 146 SQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSA 313
S TS AT+ R K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSA
Sbjct: 175 SHNTSNRSATLLRSKQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSA 8
Score = 48.7 bits (100), Expect(2) = 4e-021
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +2 / -1
Query: 62 TRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRA 172
T L FP S+FMPQ PGL*TPTP VGQ+ + R+
Sbjct: 262 TTLYFFPCSIFMPQKPGL*TPTPSVGQVPSHNTSNRS 152
>gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 522
Score = 100 bits (214), Expect(2) = 3e-039
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = -1 / +2
Query: 303 VSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
VSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 2 VSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 160
Score = 82.2 bits (173), Expect(2) = 3e-039
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / +2
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VSLT SNG
Sbjct: 167 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 307
>gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 547
Score = 161 bits (347), Expect = 7e-039
Identities = 66/102 (64%), Positives = 81/102 (79%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 240 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 419
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCF 187
AELVSNRGFEAGG + PSNIDPWSIIG+ + + VETDRTSCF
Sbjct: 420 AELVSNRGFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCF 545
Score = 112 bits (239), Expect = 6e-024
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = +2 / -1
Query: 188 KHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNS 367
K DVRSVST + P++D GS+FDG+ PPASNPLLLTSSAH PPAPA LISSK IP
Sbjct: 544 KQDVRSVSTLIYVAFPIIDQGSIFDGMLGPPASNPLLLTSSAHNPPAPA*LISSKNIPKR 365
Query: 368 VSGIFRASCGEASTARVAVWVASTSDARH 454
VSGI EAST VA A T ++H
Sbjct: 364 VSGIRLPDA*EASTTSVAFKSACTCTSKH 278
>gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell culture Medicago truncatula cDNA
clone NF038B02EC 5', mRNA sequence
Length = 614
Score = 112 bits (240), Expect(4) = 7e-037
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L+ L ++ + +C +V+A ATL VDAS R+IP+TLFGIFFEEINHAGAGG+W
Sbjct: 213 MLQLLIVVYLVVQCFDVQVQADLNATLVVDASQASGRRIPETLFGIFFEEINHAGAGGLW 392
Query: 312 AELVSNRGFEAGG 274
AELVSNRGFEAGG
Sbjct: 393 AELVSNRGFEAGG 431
Score = 34.5 bits (69), Expect(4) = 7e-037
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 138 PTGGVGVYNPGFW 100
P GVGVYNPGFW
Sbjct: 574 PXDGVGVYNPGFW 612
Score = 32.7 bits (65), Expect(4) = 7e-037
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 264 PSNIDPWSIIGDDSSVFV 211
PSNIDPWSIIG+ + + V
Sbjct: 442 PSNIDPWSIIGNATYINV 495
Score = 30.9 bits (61), Expect(4) = 7e-037
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 210 ETDRTSCFSRNIVAL 166
ETDRT CF RN VAL
Sbjct: 497 ETDRTXCFERNKVAL 541
>gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cDNA clone KV3-53A7, mRNA
sequence
Length = 569
Score = 92.3 bits (195), Expect(2) = 1e-036
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = -1 / +1
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCD 145
GFEAGG + PSNIDPWSIIG+ + + VETDRTSCF RN VALR+EVLCD
Sbjct: 1 GFEAGGPNIPSNIDPWSIIGNATYINVETDRTSCFERNKVALRLEVLCD 147
Score = 82.2 bits (173), Expect(2) = 1e-036
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1 / +1
Query: 141 CPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
CPT GVGVYNPGFWGMNIE+GK Y +V + +S +L VSLT SNG
Sbjct: 154 CPTDGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLKVSLTGSNG 294
>gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-59b16, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 95675
Score = 54.7 bits (113), Expect(6) = 3e-028
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 372 DTLFGIFFEEINHAGAGGIWAELVSNRG 289
D++ FF+EINHAGAGG+WAELV NRG
Sbjct: 4519 DSINTYFFQEINHAGAGGLWAELVDNRG 4602
Score = 47.8 bits (98), Expect(6) = 3e-028
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -1 / +3
Query: 231 DDSSVFVETDRTSCFSRNIVALRMEVLC 148
+ SS+ V TDR+SCF RN VALR++VLC
Sbjct: 40830 NSSSIIVSTDRSSCFERNKVALRLDVLC 40913
Score = 45.1 bits (92), Expect(6) = 3e-028
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -1 / +1
Query: 291 GFEAGGLHTPSNIDPWSIIGDDSSVFV 211
GFEAGG + SNI+PW IIGD+SS +
Sbjct: 4867 GFEAGGSNVSSNINPWIIIGDNSSSII 4947
Score = 38.6 bits (78), Expect(6) = 3e-028
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 144 NCPTGGVGVYNPGFWGM 94
+CP GGVG+ NP FWGM
Sbjct: 40923 SCPLGGVGISNPEFWGM 40973
Score = 33.1 bits (66), Expect(6) = 3e-028
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1 / +3
Query: 105 FWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSN 4
F+ NIE+GK Y +V +V+S +L VS S+
Sbjct: 41052 FYKQNIEQGKKYKVVFYVRSLGPINLQVSFIGSD 41153
Score = 30.9 bits (61), Expect(6) = 3e-028
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1 / +2
Query: 483 FLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFE 346
F ++C+ ++V A + + + R IPDT FG FFE
Sbjct: 4298 FSLIVCLVISECHADVNANASHISKLVIDARTRRPIPDTFFGAFFE 4435
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 644,184,466
Number of Sequences: 392609
Number of extensions: 8880428
Number of successful extensions: 60211
Number of sequences better than 1.0e-020: 26
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 20166951200
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)