TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3230260.2.1
(863 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA989383.1|CA989383 EST642891 GLSD Medicago truncatula c... 221 9e-057
gb|CA920266.1|CA920266 EST637984 MTUS Medicago truncatula c... 167 2e-040
gb|BG588065.1|BG588065 EST489874 MHRP- Medicago truncatula ... 153 3e-036
gb|BQ124855.1|BQ124855 EST610431 GLSD Medicago truncatula c... 139 6e-032
gb|CB891933.1|CB891933 EST648902 KV3 Medicago truncatula cD... 138 2e-031
gb|DW018141.1|DW018141 EST1227102 MTY Medicago truncatula c... 138 2e-031
gb|BE997470.1|BE997470 EST429193 GVSN Medicago truncatula c... 137 3e-031
gb|CX521919.1|CX521919 s13dNF1FH05VI045_469642 Virus-Infect... 133 3e-030
gb|CA921330.1|CA921330 EST639048 MTUS Medicago truncatula c... 132 7e-030
gb|CX517357.1|CX517357 s13dNF10B06VI057_399733 Virus-Infect... 130 3e-029
gb|BF648496.1|BF648496 NF046G12EC1F1099 Elicited cell cultu... 129 5e-029
gb|DW015414.1|DW015414 EST1224375 MTY Medicago truncatula c... 129 5e-029
gb|BF632173.1|BF632173 NF018H09DT1F1077 Drought Medicago tr... 125 1e-027
gb|CF069871.1|CF069871 EST670592 MTUS Medicago truncatula c... 110 2e-027
gb|BG644835.1|BG644835 EST506454 KV3 Medicago truncatula cD... 122 8e-027
gb|CX542201.1|CX542201 s13dNF86E03GS019_467710 Germinating ... 90 1e-026
gb|CA858538.1|CA858538 EST635793 GLSD Medicago truncatula c... 121 2e-026
gb|CX522118.1|CX522118 s13dNF77D06VI048_470040 Virus-Infect... 121 2e-026
gb|AC174319.2| Medicago truncatula clone mth2-179i3, WORKIN... 109 4e-026
gb|CB895205.1|CB895205 EST647997 HOGA Medicago truncatula c... 119 7e-026
gb|BQ153125.1|BQ153125 NF029H08IR1F1076 Irradiated Medicago... 118 1e-025
gb|BQ155548.1|BQ155548 NF081E10IR1F1083 Irradiated Medicago... 118 1e-025
gb|CA921665.1|CA921665 EST639383 MTUS Medicago truncatula c... 84 1e-025
gb|BQ154911.1|BQ154911 NF074C07IR1F1054 Irradiated Medicago... 115 9e-025
gb|BM779123.1|BM779123 EST589698 KV2 Medicago truncatula cD... 112 1e-024
gb|BE315960.2|BE315960 NF028G06LF1F1040 Developing leaf Med... 114 2e-024
gb|BG452346.1|BG452346 NF084G01LF1F1008 Developing leaf Med... 112 8e-024
gb|CX524693.1|CX524693 s13dNF10A05AT037_478020 Aphid-Infect... 109 8e-023
gb|BI311354.1|BI311354 EST5313104 GESD Medicago truncatula ... 66 1e-022
gb|BF644616.1|BF644616 NF017G05EC1F1039 Elicited cell cultu... 107 2e-022
gb|BF651128.1|BF651128 NF101A12EC1F1087 Elicited cell cultu... 107 2e-022
gb|AL383076.1|AL383076 MtBC11F06F1 MtBC Medicago truncatula... 106 4e-022
gb|AC135102.16| Medicago truncatula clone mth2-8m3, complet... 66 9e-022
gb|AW559511.1|AW559511 EST314559 DSIR Medicago truncatula c... 74 5e-021
gb|BG454534.1|BG454534 NF101B07LF1F1058 Developing leaf Med... 103 5e-021
gb|BI310935.1|BI310935 EST5312685 GESD Medicago truncatula ... 103 5e-021
gb|CX539763.1|CX539763 s13dNF67H05GS044_462798 Germinating ... 103 5e-021
gb|CA923067.1|CA923067 EST640785 MTUS Medicago truncatula c... 78 9e-021
gb|AL388938.1|AL388938 MtBC51G01F1 MtBC Medicago truncatula... 102 9e-021
gb|DW016083.1|DW016083 EST1225044 MTY Medicago truncatula c... 102 9e-021
>gb|CA989383.1|CA989383 EST642891 GLSD Medicago truncatula cDNA clone pGLSD-41I18, mRNA
sequence
Length = 829
Score = 221 bits (478), Expect = 9e-057
Identities = 91/208 (43%), Positives = 132/208 (63%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 174 EACLKANVERVVFVSSVAAVAINPNLPKDKAIDESCWSDKDYCKNTKNWYCYAKTEAEEQ 353
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
A +A +TGL++VTICP+LV+GP+LQ N S V + +K + V++ + +VDVRDV
Sbjct: 354 ALHFAKRTGLNVVTICPTLVLGPILQSTTNASSLVLVKLLKEGCDSVENKLRWIVDVRDV 533
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKL 323
A+LLAYEN +A GRY+C+S AI D+V LK YP Y YP ++E + ++EKL
Sbjct: 534 VNAILLAYENHEADGRYICTSHAIVTRDLVERLKGIYPNYKYPTNYIEMDDYKMLSSEKL 713
Query: 322 RKLGWTSRPMEDTLRDSIECYRAMGILN 239
+ LGW RP+E+TL DS+E Y+ G+L+
Sbjct: 714 QSLGWKLRPLEETLIDSVESYKEAGLLS 797
>gb|CA920266.1|CA920266 EST637984 MTUS Medicago truncatula cDNA clone MTUS-25C6, mRNA
sequence
Length = 710
Score = 167 bits (360), Expect = 2e-040
Identities = 68/163 (41%), Positives = 103/163 (63%)
Frame = -2 / -2
Query: 730 KNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQ 551
K E L + + +A +TGL++VTICP+LV+GP+LQ N+S + +K
Sbjct: 664 KYSELVLLCQDRSRRTGLNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGH 485
Query: 550 EIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQ 371
+ +++ + +VDVRDV A+LLAYEN +A GRY+C+S I D+V LK+ YP Y YP
Sbjct: 484 DSLENKLRWIVDVRDVVNAILLAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPT 305
Query: 370 KFVEAEGSNTYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
++E + ++EKL+ LGW RP+E+TL DS+E Y+ G+L
Sbjct: 304 NYIEMDDYKMLSSEKLQSLGWKFRPLEETLIDSVESYKEAGLL 176
>gb|BG588065.1|BG588065 EST489874 MHRP- Medicago truncatula cDNA clone pMHRP-41C7, mRNA
sequence
Length = 652
Score = 153 bits (329), Expect = 3e-036
Identities = 61/141 (43%), Positives = 91/141 (64%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 223 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 402
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AF +A +TGL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV
Sbjct: 403 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDV 582
Query: 502 AGALLLAYENLQASGRYLCSS 440
A+LLAYEN +A GRY+C+S
Sbjct: 583 VNAILLAYENHKADGRYICTS 645
>gb|BQ124855.1|BQ124855 EST610431 GLSD Medicago truncatula cDNA clone pGLSD-37M22, mRNA
sequence
Length = 693
Score = 139 bits (298), Expect = 6e-032
Identities = 57/138 (41%), Positives = 86/138 (62%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 268 EACLKANV*RVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 447
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AF +A +TGL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV
Sbjct: 448 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDV 627
Query: 502 AGALLLAYENLQASGRYL 449
A+LLAYEN + +G +L
Sbjct: 628 VNAILLAYENPRQTGEHL 681
>gb|CB891933.1|CB891933 EST648902 KV3 Medicago truncatula cDNA clone KV3-52J19, mRNA
sequence
Length = 798
Score = 138 bits (295), Expect = 2e-031
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 398 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 577
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AF +A +TGL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV
Sbjct: 578 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDV 757
Query: 502 AGALLLAYENLQA 464
A+LLAYEN +A
Sbjct: 758 VNAILLAYENHKA 796
>gb|DW018141.1|DW018141 EST1227102 MTY Medicago truncatula cDNA clone MTYB278, mRNA
sequence
Length = 857
Score = 138 bits (295), Expect = 2e-031
Identities = 56/133 (42%), Positives = 84/133 (63%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 459 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 638
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AF +A +TGL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV
Sbjct: 639 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDV 818
Query: 502 AGALLLAYENLQA 464
A+LLAYEN +A
Sbjct: 819 VNAILLAYENHKA 857
>gb|BE997470.1|BE997470 EST429193 GVSN Medicago truncatula cDNA clone pGVSN-1O21, mRNA
sequence
Length = 807
Score = 137 bits (293), Expect = 3e-031
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 417 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 596
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
AF +A +TGL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV
Sbjct: 597 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDV 776
Query: 502 AGALLLAYEN 473
A+LLAYEN
Sbjct: 777 VNAILLAYEN 806
>gb|CX521919.1|CX521919 s13dNF1FH05VI045_469642 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 554
Score = 133 bits (286), Expect = 3e-030
Identities = 53/138 (38%), Positives = 83/138 (60%)
Frame = -2 / +1
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP + ED W+D EYC++ + +Y ++KTLAE + +A +TG D+V I P +G
Sbjct: 13 SPSWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALG 192
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSP 437
PL+ P +N+S+ V +KGD+E +D + +D+A A +L +E +ASGR+LC
Sbjct: 193 PLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHILGFEQKKASGRHLCVEA 372
Query: 436 AIRVSDIVNILKTEYPTY 383
SD VN++ YP Y
Sbjct: 373 IRHYSDFVNLVAELYPEY 426
>gb|CA921330.1|CA921330 EST639048 MTUS Medicago truncatula cDNA clone MTUS-39A11, mRNA
sequence
Length = 861
Score = 132 bits (283), Expect = 7e-030
Identities = 58/150 (38%), Positives = 86/150 (57%)
Frame = -2 / -1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E WSD EYC++ WY +KTL E EA+ A ++GLD+V + PS V+GPLL P +++
Sbjct: 777 ESHWSDPEYCKRYNLWYAYAKTLGEREAWRIA*ESGLDLVVVNPSFVVGPLLAPQPASTL 598
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+ LS +KG + + V + DV A +LA E +ASGR +CSS S I+ +L
Sbjct: 597 LMILSIVKGSRGEYPNTTVGFVHIDDVIAAHILAMEEPKASGRLVCSSTVAHWSQIIQML 418
Query: 403 KTEYPTYTYPQKFVEAEGSNTYNTEKLRKL 314
+ +YP+Y Y K EG N ++ K+
Sbjct: 417 QAKYPSYPYETKCSSQEGDNNTHSMDTTKI 328
>gb|CX517357.1|CX517357 s13dNF10B06VI057_399733 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 529
Score = 130 bits (279), Expect = 3e-029
Identities = 55/132 (41%), Positives = 77/132 (58%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E WSD E+C+K + WY K +AE A+ A + G+D+V + P LV+GPLLQP +N S
Sbjct: 57 ESCWSDLEFCKKTKNWYCYGKAVAEAAAWDVAKEKGVDLVVVNPVLVLGPLLQPTINAST 236
Query: 583 KVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNIL 404
L Y+ G + + + V VRDVA A +L YE ASGRYLC+ ++ ++V IL
Sbjct: 237 IHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAETSLHRGELVEIL 416
Query: 403 KTEYPTYTYPQK 368
+P Y P K
Sbjct: 417 AKYFPEYPIPTK 452
>gb|BF648496.1|BF648496 NF046G12EC1F1099 Elicited cell culture Medicago truncatula cDNA
clone NF046G12EC 5', mRNA sequence
Length = 654
Score = 129 bits (277), Expect = 5e-029
Identities = 57/159 (35%), Positives = 84/159 (52%)
Frame = -2 / +3
Query: 844 KAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAA 665
K R V+ +P+ + E WSD E+C+ + WY KT+AE A+ A
Sbjct: 57 KCDRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEHCKNTKNWYCYGKTVAEQSAWDIAK 236
Query: 664 KTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLL 485
+ +D+V + P +V+GPLLQP +N S L Y+ G + + ++ V V+DVA A LL
Sbjct: 237 ENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKTYVNATQSYVHVKDVALAHLL 416
Query: 484 AYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
YE ASGRY+C A+ ++V IL +P Y P K
Sbjct: 417 VYETNSASGRYICCETALHRGEVVEILAKYFPEYPLPTK 533
>gb|DW015414.1|DW015414 EST1224375 MTY Medicago truncatula cDNA clone MTYA478, mRNA
sequence
Length = 854
Score = 129 bits (277), Expect = 5e-029
Identities = 54/157 (34%), Positives = 86/157 (54%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
K EA +R + +P WP + ED W+D EYC++ + +Y ++KTLAE
Sbjct: 383 KVAKEAGVERVVATSSISAIIPSPSWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAEKA 562
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDV 503
+ +A +TG D+V I P +GPL+ P +N+S+ V +K D+E +D + +D+
Sbjct: 563 GWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKSDKETYEDFFMGMAHFKDI 742
Query: 502 AGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEY 392
A A +L +E +ASGR+LC SD VN++ Y
Sbjct: 743 ALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVAELY 853
>gb|BF632173.1|BF632173 NF018H09DT1F1077 Drought Medicago truncatula cDNA clone NF018H09DT
5', mRNA sequence
Length = 651
Score = 125 bits (267), Expect = 1e-027
Identities = 56/149 (37%), Positives = 81/149 (54%)
Frame = -2 / +1
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
EAK +R V+ +P+ E WSD E+C+K + WY K +AE A+
Sbjct: 49 EAKVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKKTKNWYCYGKAVAEAAAWDV 228
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A + G+D+V + P LV+GPLLQP +N S L Y+ G + + + V VRDVA A
Sbjct: 229 AKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAH 408
Query: 490 LLAYENLQASGRYLCSSPAIRVSDIVNIL 404
+L YE ASGRYLC+ ++ ++V L
Sbjct: 409 ILVYEKPSASGRYLCAETSLHRGELVKFL 495
>gb|CF069871.1|CF069871 EST670592 MTUS Medicago truncatula cDNA clone MTUS-25C6, mRNA
sequence
Length = 786
Score = 110 bits (235), Expect(2) = 2e-027
Identities = 43/103 (41%), Positives = 63/103 (61%)
Frame = -2 / +2
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 395 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 574
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGD 554
AF +A +TGL++VTICP+LV+GP+LQ N+S + + K D
Sbjct: 575 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSSSLALIKF*KKD 703
Score = 33.6 bits (67), Expect(2) = 2e-027
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 523 LVDVRDVAGALLLAYEN 473
+VDVRDV A+LLAYEN
Sbjct: 733 IVDVRDVVNAILLAYEN 783
>gb|BG644835.1|BG644835 EST506454 KV3 Medicago truncatula cDNA clone pKV3-38B3 5' end, mRNA
sequence
Length = 781
Score = 122 bits (261), Expect = 8e-027
Identities = 54/145 (37%), Positives = 79/145 (54%)
Frame = -2 / +1
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
EAK +R V+ +P+ E WSD E+C+K + WY K +AE A+
Sbjct: 307 EAKVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKKTKNWYCYGKAVAEAAAWDV 486
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A + G+D+V + P LV+GPLLQP +N S L Y+ G + + + V VRDVA A
Sbjct: 487 AKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAH 666
Query: 490 LLAYENLQASGRYLCSSPAIRVSDI 416
+L YE ASGRYLC+ ++ ++
Sbjct: 667 ILVYEKTSASGRYLCAETSLHRGEL 741
>gb|CX542201.1|CX542201 s13dNF86E03GS019_467710 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 340
Score = 90.0 bits (190), Expect(2) = 1e-026
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = -2 / +3
Query: 658 GLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAY 479
GL++VTICP+LV+GP+LQ N+S + +K + +++ + +VDVRDV A+LLAY
Sbjct: 111 GLNVVTICPTLVLGPILQSTTNSSSLALIKILKEGHDSLENKLRWIVDVRDVVNAILLAY 290
Query: 478 ENLQASGRYLCSSPAI 431
EN +A GRY+C+S I
Sbjct: 291 ENHKADGRYICTSHTI 338
Score = 51.5 bits (106), Expect(2) = 1e-026
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2 / +2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTG 656
E WSD +YC+ + WY +KT AE +AF +A +TG
Sbjct: 5 ESCWSDKDYCKNTQNWYCYAKTEAEEQAFNFAKRTG 112
>gb|CA858538.1|CA858538 EST635793 GLSD Medicago truncatula cDNA clone pGLSD-38E6, mRNA
sequence
Length = 701
Score = 121 bits (258), Expect = 2e-026
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = -2 / -1
Query: 523 LVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSN 344
+VDVRDV A+LLAYEN +A GRY+C+S I D+V LK+ YP Y YP ++E +
Sbjct: 428 IVDVRDVVNAILLAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPTNYIEMDDYK 249
Query: 343 TYNTEKLRKLGWTSRPMEDTLRDSIECYRAMGIL 242
++EKL+ LGW RP+E+TL DS+E Y+ G+L
Sbjct: 248 MLSSEKLQSLGWKFRPLEETLIDSVESYKEAGLL 147
>gb|CX522118.1|CX522118 s13dNF77D06VI048_470040 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 602
Score = 121 bits (258), Expect = 2e-026
Identities = 54/140 (38%), Positives = 77/140 (55%)
Frame = -2 / +1
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
EAK +R V+ +P+ E WSD E+C+K + WY K +AE A+
Sbjct: 178 EAKVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKKTKNWYCYGKAVAEAAAWDV 357
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A + G+D+V + P LV+GPLLQP +N S L Y+ G + + + V VRDVA A
Sbjct: 358 AKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAH 537
Query: 490 LLAYENLQASGRYLCSSPAI 431
+L YE ASGRYLC+ ++
Sbjct: 538 ILVYEKPSASGRYLCAETSL 597
>gb|AC174319.2| Medicago truncatula clone mth2-179i3, WORKING DRAFT SEQUENCE, 5
unordered pieces
Length = 87930
Score = 109 bits (233), Expect(2) = 4e-026
Identities = 47/119 (39%), Positives = 68/119 (57%)
Frame = -2 / -2
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
+ WY KT+AE A+ A + +D+V + P +V+GPLLQP +N S L Y+ G +
Sbjct: 80309 QNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKT 80130
Query: 544 VKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+ ++ V V+DVA A LL YE ASGRY+C A+ ++V IL +P Y P K
Sbjct: 80129 YVNATQSYVHVKDVALAHLLVYETNSASGRYICCETALHRGEVVEILAKYFPEYPLPTK 79953
Score = 29.9 bits (59), Expect(2) = 4e-026
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2 / -3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNE 722
A EAK +R V+ +P+ + E WSD E+C+ +
Sbjct: 80536 ASAEAKVRRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEHCKNTK 80399
>gb|CB895205.1|CB895205 EST647997 HOGA Medicago truncatula cDNA clone HOGA-33L22, mRNA
sequence
Length = 432
Score = 119 bits (254), Expect = 7e-026
Identities = 52/140 (37%), Positives = 77/140 (55%)
Frame = -2 / +3
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
EAK +R V+ +P+ + E WSD E+C+ + WY KT+AE A+
Sbjct: 6 EAKVRRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEHCKNTKNWYCYGKTVAEQSAWDI 185
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A + +D+V + P +V+GPLLQP +N S L Y+ G + + ++ V V+DVA A
Sbjct: 186 AKENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKTYVNATQSYVHVKDVALAH 365
Query: 490 LLAYENLQASGRYLCSSPAI 431
LL YE ASGRY+C A+
Sbjct: 366 LLVYETNSASGRYICCETAL 425
>gb|BQ153125.1|BQ153125 NF029H08IR1F1076 Irradiated Medicago truncatula cDNA clone
NF029H08IR 5', mRNA sequence
Length = 636
Score = 118 bits (253), Expect = 1e-025
Identities = 50/124 (40%), Positives = 72/124 (58%)
Frame = -2 / +2
Query: 739 YCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
+C+K + WY K +AE A+ A + G+D+V + P LV+GPLLQP +N S L Y+
Sbjct: 2 FCKKTKNWYCYGKAVAEAAAWDVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLT 181
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
G + + + V VRDVA A +L YE ASGRYLC+ ++ ++V IL +P Y
Sbjct: 182 GSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAETSLHRGELVEILAKYFPEYP 361
Query: 379 YPQK 368
P K
Sbjct: 362 IPTK 373
>gb|BQ155548.1|BQ155548 NF081E10IR1F1083 Irradiated Medicago truncatula cDNA clone
NF081E10IR 5', mRNA sequence
Length = 632
Score = 118 bits (253), Expect = 1e-025
Identities = 50/124 (40%), Positives = 72/124 (58%)
Frame = -2 / +2
Query: 739 YCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIK 560
+C+K + WY K +AE A+ A + G+D+V + P LV+GPLLQP +N S L Y+
Sbjct: 2 FCKKTKNWYCYGKAVAEAAAWDVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLT 181
Query: 559 GDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYT 380
G + + + V VRDVA A +L YE ASGRYLC+ ++ ++V IL +P Y
Sbjct: 182 GSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAETSLHRGELVEILAKYFPEYP 361
Query: 379 YPQK 368
P K
Sbjct: 362 IPTK 373
>gb|CA921665.1|CA921665 EST639383 MTUS Medicago truncatula cDNA clone MTUS-43A5, mRNA
sequence
Length = 794
Score = 84.5 bits (178), Expect(2) = 1e-025
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = -2 / -1
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E ++D ++C K+ WY +SKTLAE A+ + + +D+VTI P++VIGPLLQP +NTS
Sbjct: 713 ETWFTDADFCAKSNLWYVVSKTLAEEAAWKFVKENNIDMVTINPAMVIGPLLQPVLNTSA 534
Query: 583 KVFLSYIKGDQ 551
L+ I G Q
Sbjct: 533 AAILNLINGAQ 501
Score = 53.8 bits (111), Expect(2) = 1e-025
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -2 / -1
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V+V+DVA A +LAYEN ASGR+ S++V IL+ YP+ P+K
Sbjct: 473 VNVKDVANAHILAYENASASGRHCLVERVAHYSEVVRILRELYPSLQLPEK 321
>gb|BQ154911.1|BQ154911 NF074C07IR1F1054 Irradiated Medicago truncatula cDNA clone
NF074C07IR 5', mRNA sequence
Length = 642
Score = 115 bits (246), Expect = 9e-025
Identities = 52/136 (38%), Positives = 73/136 (53%)
Frame = -2 / +1
Query: 850 EAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAY 671
EAK +R V+ +P+ E WSD E+C+K + WY K +AE A+
Sbjct: 232 EAKVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKKTKNWYCYGKAVAEAAAWDV 411
Query: 670 AAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGAL 491
A + G+D+V + P LV+GPLLQP +N S L Y+ G + + + V VRDVA
Sbjct: 412 AKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALXH 591
Query: 490 LLAYENLQASGRYLCS 443
+L Y ASGRYLC+
Sbjct: 592 ILVYXKPSASGRYLCA 639
>gb|BM779123.1|BM779123 EST589698 KV2 Medicago truncatula cDNA clone pKV2-51E5, mRNA
sequence
Length = 772
Score = 112 bits (239), Expect(2) = 1e-024
Identities = 51/140 (36%), Positives = 75/140 (53%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
+C +A KR + D + E WSD EYC++ WY +KTL E EA
Sbjct: 245 SCIKANVKRVVLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTLGEREA 424
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A ++GLD+V + PS V+GPLL P +++ + LS +KG + + V + DV
Sbjct: 425 WRIAEESGLDLVVVNPSFVVGPLLAPQPASTLLMILSIVKGSRGEYPNTTVGFVHIDDVI 604
Query: 499 GALLLAYENLQASGRYLCSS 440
A +LA E +ASGR +CSS
Sbjct: 605 AAHILAMEEPKASGRLVCSS 664
Score = 22.1 bits (42), Expect(2) = 1e-024
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 418 IVNILKTEYPTYTY 377
I+ +L+ +YP+Y Y
Sbjct: 685 IIQMLQAKYPSYPY 726
>gb|BE315960.2|BE315960 NF028G06LF1F1040 Developing leaf Medicago truncatula cDNA clone
NF028G06LF 5', mRNA sequence
Length = 447
Score = 114 bits (243), Expect = 2e-024
Identities = 44/115 (38%), Positives = 72/115 (62%)
Frame = -2 / +3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP + ED W+D EYC++ + +Y ++KTLAE + +A +TG D+V I P +G
Sbjct: 102 SPSWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALG 281
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRY 452
PL+ P +N+S+ V +KGD+E +D + +D+A A +L +E +ASGR+
Sbjct: 282 PLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHILGFEQKKASGRH 446
>gb|BG452346.1|BG452346 NF084G01LF1F1008 Developing leaf Medicago truncatula cDNA clone
NF084G01LF 5', mRNA sequence
Length = 477
Score = 112 bits (239), Expect = 8e-024
Identities = 44/117 (37%), Positives = 70/117 (59%)
Frame = -2 / +3
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP D W+D EYC++ + +Y ++KTLAE + +A +TG D+V I P +G
Sbjct: 123 SPSWPADXIKAXDCWTDLEYCKEXKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALG 302
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQASGRYLC 446
PL+ P +N+S+ V +KGD+E +D + +D+A A +L +E ASG +LC
Sbjct: 303 PLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIALAHMLGFEQKXASGXHLC 473
>gb|CX524693.1|CX524693 s13dNF10A05AT037_478020 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 567
Score = 109 bits (232), Expect = 8e-023
Identities = 47/119 (39%), Positives = 68/119 (57%)
Frame = -2 / +3
Query: 724 EEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEI 545
+ WY KT+AE A+ A + +D+V + P +V+GPLLQP +N S L Y+ G +
Sbjct: 12 KNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKT 191
Query: 544 VKDGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+ ++ V V+DVA A LL YE ASGRY+C A+ ++V IL +P Y P K
Sbjct: 192 YVNATQSYVHVKDVALAHLLVYETNSASGRYICCETALHRGEVVEILAKYFPEYPLPTK 368
>gb|BI311354.1|BI311354 EST5313104 GESD Medicago truncatula cDNA clone pGESD10L1 5' end,
mRNA sequence
Length = 763
Score = 65.7 bits (137), Expect(2) = 1e-022
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = -2 / +1
Query: 661 TGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLA 482
+G+D+V + P +GPLLQ +N S V + G+++ + V V+DVA A +L
Sbjct: 277 SGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVLV 456
Query: 481 YENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
YE A+GRYLC + + S I+ Y Y
Sbjct: 457 YETPTAAGRYLCVNGIYQFSSFAKIVSELYHDY 555
Score = 62.0 bits (129), Expect(2) = 1e-022
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+A A KR + NP+WP+ +A E SW+D EYC+ +WY +SKT AE
Sbjct: 73 EASKRAGVKRVVLTSSISAMVPNPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKV 252
Query: 682 AFAYAAK 662
A+ + K
Sbjct: 253 AWEFCEK 273
>gb|BF644616.1|BF644616 NF017G05EC1F1039 Elicited cell culture Medicago truncatula cDNA
clone NF017G05EC 5', mRNA sequence
Length = 678
Score = 107 bits (229), Expect = 2e-022
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -2 / +1
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 403 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 582
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
AF +A +TGL++VTICP+LV+GP+LQ N+S
Sbjct: 583 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSS 678
>gb|BF651128.1|BF651128 NF101A12EC1F1087 Elicited cell culture Medicago truncatula cDNA
clone NF101A12EC 5', mRNA sequence
Length = 655
Score = 107 bits (229), Expect = 2e-022
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -2 / +3
Query: 862 KACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHE 683
+AC +A +R V NP+ PK +A E WSD +YC+ + WY +KT AE +
Sbjct: 369 EACLKANVERVVFVSSAAAVAINPNLPKDKAIDESCWSDKDYCKNTQNWYCYAKTEAEEQ 548
Query: 682 AFAYAAKTGLDIVTICPSLVIGPLLQPAVNTS 587
AF +A +TGL++VTICP+LV+GP+LQ N+S
Sbjct: 549 AFNFAKRTGLNVVTICPTLVLGPILQSTTNSS 644
>gb|AL383076.1|AL383076 MtBC11F06F1 MtBC Medicago truncatula cDNA clone MtBC11F06 T3, mRNA
sequence
Length = 351
Score = 106 bits (227), Expect = 4e-022
Identities = 41/112 (36%), Positives = 68/112 (60%)
Frame = -2 / +2
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIG 617
+P WP + ED W+D EYC++ + +Y ++KTLA + +A +TG D+V I P +G
Sbjct: 14 SPSWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAXKAGWEFAKETGFDVVMINPGTALG 193
Query: 616 PLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLAYENLQAS 461
PL+ P +N+S+ V +KGD+E +D + +D+A A +L +E +AS
Sbjct: 194 PLIPPRINSSMAVLAGVLKGDKETYEDFFMGMAHFKDIAXAHILGFEQKKAS 349
>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
Length = 144042
Score = 65.7 bits (137), Expect(2) = 9e-022
Identities = 32/93 (34%), Positives = 49/93 (52%)
Frame = -2 / -1
Query: 661 TGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVAGALLLA 482
+G+D+V + P +GPLLQ +N S V + G+++ + V V+DVA A +L
Sbjct: 50232 SGVDVVAVHPGTCLGPLLQNQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVLV 50053
Query: 481 YENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
YE A+GRYLC + + S I+ Y Y
Sbjct: 50052 YETPTAAGRYLCVNGIYQFSSFAKIVSELYHDY 49954
Score = 59.3 bits (123), Expect(2) = 9e-022
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = -2 / -1
Query: 796 NPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAK 662
NP+WP+ +A E SW+D EYC+ +WY +SKT AE A+ + K
Sbjct: 50370 NPNWPENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKVAWEFCEK 50236
>gb|AW559511.1|AW559511 EST314559 DSIR Medicago truncatula cDNA clone pDSIR-19F24, mRNA
sequence
Length = 649
Score = 73.9 bits (155), Expect(2) = 5e-021
Identities = 31/69 (44%), Positives = 47/69 (68%)
Frame = -2 / +3
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +S+ + CR+++ WY LSKTLAE A+ + + +D+V I P++V GPLLQP +N SV
Sbjct: 12 ETWFSNPDLCRESKLWYTLSKTLAEAAAWKFVNENSIDMVAINPTMVAGPLLQPELNGSV 191
Query: 583 KVFLSYIKG 557
+ L+ I G
Sbjct: 192 EPILNLISG 218
Score = 48.7 bits (100), Expect(2) = 5e-021
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = -2 / +3
Query: 517 DVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
+V+DVA A +LAYE ASGRY + + S++ IL+ YPT K
Sbjct: 252 NVKDVANAHILAYETASASGRYCLAERVVHYSELAMILRDLYPTLQISDK 401
>gb|BG454534.1|BG454534 NF101B07LF1F1058 Developing leaf Medicago truncatula cDNA clone
NF101B07LF 5', mRNA sequence
Length = 678
Score = 103 bits (219), Expect = 5e-021
Identities = 43/112 (38%), Positives = 67/112 (59%)
Frame = -2 / +2
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
+Y ++KTLAE + +A +TG D+V I P +GPL+ P +N+S+ V +KGD+E +
Sbjct: 5 YYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDKETYE 184
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
D + +D+A A +L +E +ASGR+LC SD VN++ YP Y
Sbjct: 185 DFFMGMAHFKDIALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVAELYPEY 340
>gb|BI310935.1|BI310935 EST5312685 GESD Medicago truncatula cDNA clone pGESD9O24 5' end,
mRNA sequence
Length = 728
Score = 103 bits (219), Expect = 5e-021
Identities = 47/135 (34%), Positives = 71/135 (52%)
Frame = -2 / +2
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
+C +A KR + D + E WSD EYC++ WY +KTL E EA
Sbjct: 317 SCIKANVKRVVLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTLGEREA 496
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A ++GLD+V + PS V+GPLL P +++ + LS +KG + + V + DV
Sbjct: 497 WRIAEESGLDLVVVNPSFVVGPLLAPQPASTLLMILSIVKGSRGEYPNTTVGFVHIDDVI 676
Query: 499 GALLLAYENLQASGR 455
A +LA E +ASG+
Sbjct: 677 AAHILAMEEPKASGK 721
>gb|CX539763.1|CX539763 s13dNF67H05GS044_462798 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 597
Score = 103 bits (219), Expect = 5e-021
Identities = 43/112 (38%), Positives = 67/112 (59%)
Frame = -2 / +1
Query: 718 WYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVK 539
+Y ++KTLAE + +A +TG D+V I P +GPL+ P +N+S+ V +KGD+E +
Sbjct: 13 YYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDKETYE 192
Query: 538 DGPKNLVDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTY 383
D + +D+A A +L +E +ASGR+LC SD VN++ YP Y
Sbjct: 193 DFFMGMAHFKDIALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVAELYPEY 348
>gb|CA923067.1|CA923067 EST640785 MTUS Medicago truncatula cDNA clone MTUS-62D9, mRNA
sequence
Length = 712
Score = 77.6 bits (163), Expect(2) = 9e-021
Identities = 31/69 (44%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 763 EDSWSDGEYCRKNEEWYFLSKTLAEHEAFAYAAKTGLDIVTICPSLVIGPLLQPAVNTSV 584
E +S+ ++CR+++ WY LSKTLAE A+ + + +D+V++ P++V GPLLQP VN SV
Sbjct: 681 ETWFSNPDFCRESKLWYVLSKTLAEAAAWKFVNENNIDMVSLNPTMVAGPLLQPEVNESV 502
Query: 583 KVFLSYIKG 557
+ L+ I G
Sbjct: 501 EPILNLING 475
Score = 44.1 bits (90), Expect(2) = 9e-021
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 520 VDVRDVAGALLLAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQK 368
V+V+DVA A + AYE ASGR L + + S++ IL+ YPT K
Sbjct: 444 VNVKDVANAHIHAYEIASASGRCLLAERVVHYSELAMILRDLYPTLPISDK 292
>gb|AL388938.1|AL388938 MtBC51G01F1 MtBC Medicago truncatula cDNA clone MtBC51G01 T3, mRNA
sequence
Length = 421
Score = 102 bits (217), Expect = 9e-021
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = -2 / +1
Query: 487 LAYENLQASGRYLCSSPAIRVSDIVNILKTEYPTYTYPQKFVEAEGSNTYNTEKLRKLGW 308
LAYEN +A GRY+C+S I D+V LK+ YP Y YP ++E + ++EKL+ LGW
Sbjct: 16 LAYENHKADGRYICTSHTINTRDLVERLKSIYPNYKYPTNYIEMDDYKMLSSEKLQSLGW 195
Query: 307 TSRPMEDTLRDSIECYRAMGIL 242
RP+E+TL DS+E Y+ G+L
Sbjct: 196 KFRPLEETLIDSVESYKEAGLL 261
>gb|DW016083.1|DW016083 EST1225044 MTY Medicago truncatula cDNA clone MTYAC94, mRNA
sequence
Length = 849
Score = 102 bits (217), Expect = 9e-021
Identities = 47/134 (35%), Positives = 70/134 (52%)
Frame = -2 / +3
Query: 859 ACYEAKAKRXXXXXXXXXVFNNPDWPKGEAFTEDSWSDGEYCRKNEEWYFLSKTLAEHEA 680
+C +A KR + D + E WSD EYC++ WY +KTL E EA
Sbjct: 447 SCIKANVKRVVLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTLGEREA 626
Query: 679 FAYAAKTGLDIVTICPSLVIGPLLQPAVNTSVKVFLSYIKGDQEIVKDGPKNLVDVRDVA 500
+ A ++GLD+V + PS V+GPLL P +++ + LS +KG + + V + DV
Sbjct: 627 WRIAEESGLDLVVVNPSFVVGPLLAPQPASTLLMILSIVKGSRGEYPNTTVGFVHIDDVI 806
Query: 499 GALLLAYENLQASG 458
A +LA E +ASG
Sbjct: 807 AAHILAMEEPKASG 848
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 814,312,141
Number of Sequences: 392609
Number of extensions: 11130721
Number of successful extensions: 79841
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 29150993952
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)