TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204398.2.1
(666 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE124894.1|BE124894 EST393929 GVN Medicago truncatula cD... 170 2e-041
gb|BG644962.1|BG644962 EST506581 KV3 Medicago truncatula cD... 170 2e-041
gb|BQ165199.1|BQ165199 EST611068 KVKC Medicago truncatula c... 170 2e-041
gb|BQ165337.1|BQ165337 EST611206 KVKC Medicago truncatula c... 170 2e-041
gb|CB891505.1|CB891505 EST648474 KV3 Medicago truncatula cD... 170 2e-041
gb|BE240576.1|BE240576 EST404625 MHRP- Medicago truncatula ... 169 5e-041
gb|BG588238.1|BG588238 EST490047 MHRP- Medicago truncatula ... 169 5e-041
gb|BF633802.1|BF633802 NF066C10DT1F1081 Drought Medicago tr... 167 1e-040
gb|CA920234.1|CA920234 EST637952 MTUS Medicago truncatula c... 167 1e-040
gb|CX530147.1|CX530147 s13dNF44H02MJ025_246329 Methyl Jasmo... 167 1e-040
gb|CX542314.1|CX542314 s13dNF82D03GS026_467944 Germinating ... 167 1e-040
gb|BG582575.1|BG582575 EST484320 GVN Medicago truncatula cD... 164 1e-039
gb|CA922366.1|CA922366 EST640084 MTUS Medicago truncatula c... 163 2e-039
gb|AW257533.1|AW257533 EST305670 KV2 Medicago truncatula cD... 124 1e-034
gb|BE240261.1|BE240261 EST404310 MHRP- Medicago truncatula ... 121 2e-032
gb|BQ137775.1|BQ137775 NF003G07RT1F1000 Developing root Med... 130 3e-029
gb|AL389092.1|AL389092 MtBC52G02R1 MtBC Medicago truncatula... 129 5e-029
gb|AL389091.1|AL389091 MtBC52G02F1 MtBC Medicago truncatula... 105 8e-027
emb|CR478568.1| mth2-188E10FM1 BAC end, cultivar Jemalong A... 107 2e-022
>gb|BE124894.1|BE124894 EST393929 GVN Medicago truncatula cDNA clone pGVN-68D13, mRNA
sequence
Length = 490
Score = 170 bits (366), Expect = 2e-041
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = +1 / +2
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 20 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 199
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 200 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 295
Score = 127 bits (272), Expect = 2e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / -2
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 285 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 106
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAGF AH I KSA K PD
Sbjct: 105 ALYNTFAKYFAGFVAHSVIVKSARPKLPD 19
>gb|BG644962.1|BG644962 EST506581 KV3 Medicago truncatula cDNA clone pKV3-38H22 5' end,
mRNA sequence
Length = 788
Score = 170 bits (366), Expect = 2e-041
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = +1 / -1
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 470 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 291
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 290 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 195
Score = 127 bits (272), Expect = 2e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 205 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 384
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 385 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 471
>gb|BQ165199.1|BQ165199 EST611068 KVKC Medicago truncatula cDNA clone pKVKC-6G8, mRNA
sequence
Length = 780
Score = 170 bits (366), Expect = 2e-041
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = +1 / -2
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 470 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 291
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 290 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 195
Score = 127 bits (272), Expect = 2e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 205 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 384
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 385 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 471
>gb|BQ165337.1|BQ165337 EST611206 KVKC Medicago truncatula cDNA clone pKVKC-8C11, mRNA
sequence
Length = 757
Score = 170 bits (366), Expect = 2e-041
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = +1 / -3
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 470 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 291
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 290 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 195
Score = 127 bits (272), Expect = 2e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 205 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 384
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 385 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 471
>gb|CB891505.1|CB891505 EST648474 KV3 Medicago truncatula cDNA clone KV3-50H1, mRNA
sequence
Length = 707
Score = 170 bits (366), Expect = 2e-041
Identities = 71/92 (77%), Positives = 79/92 (85%)
Frame = +1 / -1
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 419 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 240
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 239 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 144
Score = 127 bits (272), Expect = 2e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 154 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 333
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 334 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 420
>gb|BE240576.1|BE240576 EST404625 MHRP- Medicago truncatula cDNA clone pMHRP-45L4, mRNA
sequence
Length = 415
Score = 169 bits (363), Expect = 5e-041
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = +1 / +2
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 107 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 286
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR +LL+L+GP H*
Sbjct: 287 KKYKKTLNDAVHSETSGNYRDYLLALLGPNH* 382
Score = 125 bits (268), Expect = 6e-028
Identities = 60/89 (67%), Positives = 64/89 (71%)
Frame = -2 / -2
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 372 GPKSARR*SL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 193
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 192 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 106
>gb|BG588238.1|BG588238 EST490047 MHRP- Medicago truncatula cDNA clone pMHRP-41D18, mRNA
sequence
Length = 486
Score = 169 bits (363), Expect = 5e-041
Identities = 70/92 (76%), Positives = 79/92 (85%)
Frame = +1 / +2
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLI+V+VTRTEIDMQYIKAEY
Sbjct: 5 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIKVIVTRTEIDMQYIKAEYA 184
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP H*
Sbjct: 185 KKYKKTLNDAVHSETSGNYRDFLLALLGPNH* 280
Score = 125 bits (268), Expect = 6e-028
Identities = 59/89 (66%), Positives = 63/89 (70%)
Frame = -2 / -1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS + FLYF YSALIYCISISVLVT T +SVLS VP PF+
Sbjct: 270 GPKSARRKSL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTFMSVLSLVPIPFI 91
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 90 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 4
>gb|BF633802.1|BF633802 NF066C10DT1F1081 Drought Medicago truncatula cDNA clone NF066C10DT
5', mRNA sequence
Length = 594
Score = 167 bits (360), Expect = 1e-040
Identities = 69/93 (74%), Positives = 81/93 (87%)
Frame = +1 / +2
Query: 1 TSGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEY 180
TSGNF ALL I++CAE+PAKYFAK+LRKAMKGLGTDD L+RV+VTR+EID+ YIKAEY
Sbjct: 278 TSGNFAHALLTIVQCAESPAKYFAKVLRKAMKGLGTDDTKLMRVIVTRSEIDLHYIKAEY 457
Query: 181 FKKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSG+YR FLLSL+GP *
Sbjct: 458 LKKYKKTLNDAVHSETSGHYRAFLLSLLGPNQ* 556
Score = 132 bits (283), Expect = 5e-030
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = -2 / -1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP SERR *+PDVSE AS + FLYF +YSA I C SIS+LVT TLIS +SSVPRPF+
Sbjct: 546 GPKSERRKAL*WPDVSE*TASFSVFLYFFRYSAFI*CRSISLLVTITLISFVSSVPRPFI 367
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A R++FAKYFAG SAH I KSA +KFPD
Sbjct: 366 ALRRTFAKYFAGLSAHWTIVKSA*AKFPD 280
>gb|CA920234.1|CA920234 EST637952 MTUS Medicago truncatula cDNA clone MTUS-25G6, mRNA
sequence
Length = 740
Score = 167 bits (360), Expect = 1e-040
Identities = 69/93 (74%), Positives = 81/93 (87%)
Frame = +1 / -1
Query: 1 TSGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEY 180
TSGNF ALL I++CAE+PAKYFAK+LRKAMKGLGTDD L+RV+VTR+EID+ YIKAEY
Sbjct: 458 TSGNFAHALLTIVQCAESPAKYFAKVLRKAMKGLGTDDTKLMRVIVTRSEIDLHYIKAEY 279
Query: 181 FKKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSG+YR FLLSL+GP *
Sbjct: 278 LKKYKKTLNDAVHSETSGHYRAFLLSLLGPNQ* 180
Score = 132 bits (283), Expect = 5e-030
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP SERR *+PDVSE AS + FLYF +YSA I C SIS+LVT TLIS +SSVPRPF+
Sbjct: 190 GPKSERRKAL*WPDVSE*TASFSVFLYFFRYSAFI*CRSISLLVTITLISFVSSVPRPFI 369
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A R++FAKYFAG SAH I KSA +KFPD
Sbjct: 370 ALRRTFAKYFAGLSAHWTIVKSA*AKFPD 456
>gb|CX530147.1|CX530147 s13dNF44H02MJ025_246329 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 636
Score = 167 bits (360), Expect = 1e-040
Identities = 69/93 (74%), Positives = 81/93 (87%)
Frame = +1 / +3
Query: 1 TSGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEY 180
TSGNF ALL I++CAE+PAKYFAK+LRKAMKGLGTDD L+RV+VTR+EID+ YIKAEY
Sbjct: 219 TSGNFAHALLTIVQCAESPAKYFAKVLRKAMKGLGTDDTKLMRVIVTRSEIDLHYIKAEY 398
Query: 181 FKKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSG+YR FLLSL+GP *
Sbjct: 399 LKKYKKTLNDAVHSETSGHYRAFLLSLLGPNQ* 497
Score = 132 bits (283), Expect = 5e-030
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = -2 / -3
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP SERR *+PDVSE AS + FLYF +YSA I C SIS+LVT TLIS +SSVPRPF+
Sbjct: 487 GPKSERRKAL*WPDVSE*TASFSVFLYFFRYSAFI*CRSISLLVTITLISFVSSVPRPFI 308
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A R++FAKYFAG SAH I KSA +KFPD
Sbjct: 307 ALRRTFAKYFAGLSAHWTIVKSA*AKFPD 221
>gb|CX542314.1|CX542314 s13dNF82D03GS026_467944 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 551
Score = 167 bits (360), Expect = 1e-040
Identities = 70/93 (75%), Positives = 81/93 (87%)
Frame = +1 / +1
Query: 1 TSGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEY 180
TSGNF AL I++CA NPAKYFAK+L KAMKGLGT+D TLIRV+VTRTEIDM+YIKAEY
Sbjct: 271 TSGNFGHALRTIIQCAHNPAKYFAKVLYKAMKGLGTNDTTLIRVIVTRTEIDMKYIKAEY 450
Query: 181 FKKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A+HSETSGNYR FLL+L+GP +*
Sbjct: 451 AKKYKKTLNDAVHSETSGNYRAFLLALLGPNN* 549
Score = 123 bits (263), Expect = 3e-027
Identities = 58/89 (65%), Positives = 65/89 (73%)
Frame = -2 / -1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVSE AS N FLYFL YSAL+Y ISISVLVT TL+SV+S VP+PF+
Sbjct: 539 GPKSARRKAL*LPDVSE*TASFNVFLYFLAYSALMYFISISVLVTMTLMSVVSLVPKPFI 360
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I +SA KFPD
Sbjct: 359 ALYNTFAKYFAGL*AHCIIVRSA*PKFPD 273
>gb|BG582575.1|BG582575 EST484320 GVN Medicago truncatula cDNA clone pGVN-70G13 5' end,
mRNA sequence
Length = 725
Score = 164 bits (353), Expect = 1e-039
Identities = 69/93 (74%), Positives = 80/93 (86%)
Frame = +1 / +2
Query: 1 TSGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEY 180
TSGNF ALL I++CAE+PAKYFAK+LRKAMKGLGTDD L+RV+VTR+EID+ YIKAEY
Sbjct: 269 TSGNFAHALLTIVQCAESPAKYFAKVLRKAMKGLGTDDTKLMRVIVTRSEIDLHYIKAEY 448
Query: 181 FKKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KKYKK L +A HSETSG+YR FLLSL+GP *
Sbjct: 449 LKKYKKTLNDAGHSETSGHYRAFLLSLLGPNQ* 547
Score = 131 bits (281), Expect = 1e-029
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = -2 / -3
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP SERR *+PDVSE AS + FLYF +YSA I C SIS+LVT TLIS +SSVPRPF+
Sbjct: 537 GPKSERRKAL*WPDVSE*PASFSVFLYFFRYSAFI*CRSISLLVTITLISFVSSVPRPFI 358
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A R++FAKYFAG SAH I KSA +KFPD
Sbjct: 357 ALRRTFAKYFAGLSAHWTIVKSA*AKFPD 271
>gb|CA922366.1|CA922366 EST640084 MTUS Medicago truncatula cDNA clone MTUS-52G11, mRNA
sequence
Length = 667
Score = 163 bits (351), Expect = 2e-039
Identities = 69/92 (75%), Positives = 77/92 (83%)
Frame = +1 / -3
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF ALL I CA NPAKYFAK+L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY
Sbjct: 467 SGNFGLALLTITECATNPAKYFAKVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYA 288
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH* 279
KK KK L +A+H ETSGNYR FLL+L+GP H*
Sbjct: 287 KKSKKTLNDAVHFETSGNYRDFLLALLGPNH* 192
Score = 121 bits (258), Expect = 1e-026
Identities = 58/89 (65%), Positives = 63/89 (70%)
Frame = -2 / +1
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP S RR * PDVS+ AS + FL F YSALIYCISISVLVT TL+SVLS VP PF+
Sbjct: 202 GPKSARRKSL*LPDVSK*TASFSVFLDFFAYSALIYCISISVLVTMTLMSVLSLVPIPFI 381
Query: 89 AFRKSFAKYFAGFSAHLRIAKSANSKFPD 3
A +FAKYFAG AH I KSA KFPD
Sbjct: 382 ALYNTFAKYFAGLVAHSVIVKSARPKFPD 468
>gb|AW257533.1|AW257533 EST305670 KV2 Medicago truncatula cDNA clone KV2-10K21, mRNA
sequence
Length = 594
Score = 124 bits (265), Expect(2) = 1e-034
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +1 / -1
Query: 73 KLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYFKKYKKPLAEAIHSETSGNYRTFL 252
+ L KAMKG+GT+D TLIRV+VTR+EIDMQYIKAEY KKYKK L +A+H ETSGNYR FL
Sbjct: 411 RCLYKAMKGMGTNDSTLIRVIVTRSEIDMQYIKAEYAKKYKKTLNDAVHFETSGNYRDFL 232
Query: 253 LSLVGPGH* 279
L+L+GP H*
Sbjct: 231 LALLGPNH* 205
Score = 43.2 bits (88), Expect(2) = 1e-034
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +1 / -3
Query: 4 SGNFEFALLAILRCAENPAKYFAKL 78
SGNF A L I CA NPAKYFAK+
Sbjct: 481 SGNFGLAFLTITECATNPAKYFAKV 407
>gb|BE240261.1|BE240261 EST404310 MHRP- Medicago truncatula cDNA clone pMHRP-43B5, mRNA
sequence
Length = 493
Score = 121 bits (258), Expect(2) = 2e-032
Identities = 51/71 (71%), Positives = 60/71 (84%)
Frame = +1 / +2
Query: 67 FAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYFKKYKKPLAEAIHSETSGNYRT 246
FAK+LRKAMKGL T D L+RV+VTR+EID+ YIKAEY KKYKK L +A+HSETSG+YR
Sbjct: 71 FAKVLRKAMKGLRTYDTKLMRVIVTRSEIDLHYIKAEYLKKYKKTLNDAVHSETSGHYRA 250
Query: 247 FLLSLVGPGH* 279
FLLSL+GP *
Sbjct: 251 FLLSLLGPNQ* 283
Score = 90.4 bits (191), Expect(2) = 7e-022
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = -2 / -2
Query: 269 GPTSERRNVR*FPDVSEWIASANGFLYFLKYSALIYCISISVLVTTTLISVLSSVPRPFM 90
GP SERR *+PDVSE AS + FLYF +YSA I C SIS+LVT TLIS +S V RPF+
Sbjct: 273 GPKSERRKAL*WPDVSE*TASFSVFLYFFRYSAFI*CRSISLLVTITLISFVS*VLRPFI 94
Query: 89 AFRKSFAK 66
A R++FAK
Sbjct: 93 ALRRTFAK 70
Score = 39.6 bits (80), Expect(2) = 2e-032
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1 / +1
Query: 1 TSGNFEFALLAILRCAENPAKYF 69
TSGNF ALL I++CAE+PAK F
Sbjct: 4 TSGNFAHALLTIVQCAESPAK*F 72
Score = 34.5 bits (69), Expect(2) = 7e-022
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 65 YFAGFSAHLRIAKSANSKFPD 3
YFAG SAH I SA +KFPD
Sbjct: 68 YFAGLSAHWTIVNSA*AKFPD 6
>gb|BQ137775.1|BQ137775 NF003G07RT1F1000 Developing root Medicago truncatula cDNA clone
NF003G07RT 5', mRNA sequence
Length = 788
Score = 130 bits (278), Expect = 3e-029
Identities = 55/91 (60%), Positives = 62/91 (68%)
Frame = +1 / +1
Query: 4 SGNFEFALLAILRCAENPAKYFAKLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYF 183
SGNF L I CA NP KYFAK+ KAMKG+GT+D TLI V+ TRTEIDMQ K +Y
Sbjct: 298 SGNFXLXLXTITECATNPXKYFAKVXXKAMKGMGTNDXTLIXVIXTRTEIDMQNXKTKYA 477
Query: 184 KKYKKPLAEAIHSETSGNYRTFLLSLVGPGH 276
KK L +A HS TSGNYR LL L+GP H
Sbjct: 478 XXXKKTLTDAXHSXTSGNYRDXLLPLLGPNH 570
>gb|AL389092.1|AL389092 MtBC52G02R1 MtBC Medicago truncatula cDNA clone MtBC52G02 T7, mRNA
sequence
Length = 552
Score = 129 bits (276), Expect = 5e-029
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = +1 / +1
Query: 73 KLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYFKKYKKPLAEAIHSETSGNYRTFL 252
++L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY KKYKK L +A+HSETSGNYR FL
Sbjct: 97 QVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYAKKYKKTLNDAVHSETSGNYRDFL 276
Query: 253 LSLVGPGH* 279
L+L+GP H*
Sbjct: 277 LALLGPNH* 303
>gb|AL389091.1|AL389091 MtBC52G02F1 MtBC Medicago truncatula cDNA clone MtBC52G02 T3, mRNA
sequence
Length = 489
Score = 105 bits (223), Expect(2) = 8e-027
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1 / +3
Query: 73 KLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYFKKYKKPLAEAIHSETSGN 237
++L KAMKG+GT+D TLIRV+VTRTEIDMQYIKAEY KKYKK L +A+HSETSGN
Sbjct: 324 QVLYKAMKGMGTNDSTLIRVIVTRTEIDMQYIKAEYAKKYKKTLNDAVHSETSGN 488
Score = 37.7 bits (76), Expect(2) = 8e-027
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 13 FEFALLAILRCAENPAKYFAKL 78
F ALL I CA NPAKYFAK+
Sbjct: 3 FGLALLTITECATNPAKYFAKV 68
>emb|CR478568.1| mth2-188E10FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 593
Score = 107 bits (228), Expect = 2e-022
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = +1 / -3
Query: 73 KLLRKAMKGLGTDDKTLIRVVVTRTEIDMQYIKAEYFKKYKKPLAEAIHSETSGNYRTFL 252
++LRK+MKG+GTDD LIRV+VTRTEIDMQ IKA Y+ +YKKPL A+ S+T G+Y FL
Sbjct: 405 QILRKSMKGIGTDDSRLIRVIVTRTEIDMQPIKAAYYSRYKKPLTHAVKSDTRGHYEDFL 226
Query: 253 LSLVGPGH* 279
+SL+G +*
Sbjct: 225 ISLLGTDY* 199
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 671,155,988
Number of Sequences: 392609
Number of extensions: 9366409
Number of successful extensions: 42961
Number of sequences better than 1.0e-020: 20
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21049255315
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)