TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3147935.2.1
(711 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 147 2e-034
gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell cultu... 144 2e-033
gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula ... 139 4e-032
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 135 8e-031
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 135 8e-031
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 133 2e-030
gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Med... 133 4e-030
gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula c... 133 4e-030
gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula c... 133 4e-030
gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula c... 133 4e-030
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 126 5e-028
gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula c... 123 2e-027
emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17... 122 8e-027
gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula... 120 2e-026
gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower M... 120 2e-026
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 120 2e-026
gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula c... 118 8e-026
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 115 1e-024
gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula c... 114 1e-024
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 109 6e-023
gb|CF068061.1|CF068061 EST668782 MTUS Medicago truncatula c... 105 1e-021
gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula ... 102 5e-021
gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone m... 102 5e-021
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 147 bits (316), Expect = 2e-034
Identities = 48/97 (49%), Positives = 74/97 (76%)
Frame = -3 / -3
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W +L + WK +LP G + F+ RT PL+ WHVLGLG++ ++ + ++E A+VIH
Sbjct: 472 YHNWQKLNHDRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIH 293
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNIH 395
Y+G LKPWLEISIPK++GYW +Y++Y++ +L++CNI+
Sbjct: 292 YNGNLKPWLEISIPKFKGYWTKYVDYESEYLRECNIN 182
>gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF088D03EC 5', mRNA sequence
Length = 645
Score = 144 bits (308), Expect = 2e-033
Identities = 47/96 (48%), Positives = 68/96 (70%)
Frame = -3 / +1
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YHRW L + WK +LP G + FYN T PLD WHVLGLG+D ++ E+++A+V H
Sbjct: 190 YHRWQDLNEDRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIDNAAVXH 369
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y+G KPWL +++ KY+ YW++Y+ +DNP+LQ CN+
Sbjct: 370 YNGNFKPWLNLAVSKYKSYWSKYVMFDNPYLQVCNL 477
>gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula cDNA clone pGESD4L15 5' end,
mRNA sequence
Length = 731
Score = 139 bits (299), Expect = 4e-032
Identities = 48/96 (50%), Positives = 68/96 (70%)
Frame = -3 / +2
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YHRW L + WK +LP G + FY T PL+ WHVLGLG+ SI R E+E+A+V+H
Sbjct: 308 YHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVH 487
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y+G +KPWLEI++ KYR YW +Y+ Y++P+L+ C +
Sbjct: 488 YNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKL 595
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 135 bits (289), Expect = 8e-031
Identities = 44/84 (52%), Positives = 68/84 (80%)
Frame = -3 / +2
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + F+ RT PL+ WHVLGLG++ ++ + ++E A+VIHY+G LKPWLEISI
Sbjct: 45410 WKLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKPWLEISI 45589
Query: 466 PKYRGYWNRYLNYDNPHLQQCNIH 395
PK++GYW +Y++Y++ +L++CNI+
Sbjct: 45590 PKFKGYWTKYVDYESEYLRECNIN 45661
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 135 bits (289), Expect = 8e-031
Identities = 44/84 (52%), Positives = 68/84 (80%)
Frame = -3 / +3
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + F+ RT PL+ WHVLGLG++ ++ + ++E A+VIHY+G LKPWLEISI
Sbjct: 1212 WKLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKPWLEISI 1391
Query: 466 PKYRGYWNRYLNYDNPHLQQCNIH 395
PK++GYW +Y++Y++ +L++CNI+
Sbjct: 1392 PKFKGYWTKYVDYESEYLRECNIN 1463
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 133 bits (286), Expect = 2e-030
Identities = 43/84 (51%), Positives = 68/84 (80%)
Frame = -3 / -2
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + F+ RT PL+ WHVLGLG++ ++ + +++ A+V+HY+G +KPWLEISI
Sbjct: 52282 WKLGTLPPGLITFWKRTFPLNKAWHVLGLGYNPNVNQKDIDRAAVMHYNGNMKPWLEISI 52103
Query: 466 PKYRGYWNRYLNYDNPHLQQCNIH 395
PK+RGYW +Y+NY++ +L++CNI+
Sbjct: 52102 PKFRGYWTKYVNYNHVYLRECNIN 52031
>gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF092D05LF 5', mRNA sequence
Length = 652
Score = 133 bits (284), Expect = 4e-030
Identities = 44/96 (45%), Positives = 70/96 (72%)
Frame = -3 / +1
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH++ Q G + + SLPLG + FYN+ + LD RWH+LGLG+DS I +++E A+VIH
Sbjct: 298 YHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIH 477
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y G KPW++I + +Y+ YW++++ +D+P L++CNI
Sbjct: 478 YDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 585
>gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula cDNA clone pKVKC-10F2, mRNA
sequence
Length = 735
Score = 133 bits (284), Expect = 4e-030
Identities = 44/96 (45%), Positives = 70/96 (72%)
Frame = -3 / -2
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH++ Q G + + SLPLG + FYN+ + LD RWH+LGLG+DS I +++E A+VIH
Sbjct: 611 YHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIH 432
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y G KPW++I + +Y+ YW++++ +D+P L++CNI
Sbjct: 431 YDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 324
>gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula cDNA clone MTUS-47D7, mRNA
sequence
Length = 808
Score = 133 bits (284), Expect = 4e-030
Identities = 44/96 (45%), Positives = 70/96 (72%)
Frame = -3 / -2
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH++ Q G + + SLPLG + FYN+ + LD RWH+LGLG+DS I +++E A+VIH
Sbjct: 588 YHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIH 409
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y G KPW++I + +Y+ YW++++ +D+P L++CNI
Sbjct: 408 YDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 301
>gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula cDNA clone MTUS-55E11, mRNA
sequence
Length = 775
Score = 133 bits (284), Expect = 4e-030
Identities = 44/96 (45%), Positives = 70/96 (72%)
Frame = -3 / -1
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH++ Q G + + SLPLG + FYN+ + LD RWH+LGLG+DS I +++E A+VIH
Sbjct: 532 YHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGYDSGIDTNKIEQAAVIH 353
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCNI 398
Y G KPW++I + +Y+ YW++++ +D+P L++CNI
Sbjct: 352 YDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 245
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 126 bits (269), Expect = 5e-028
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = -3 / -3
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + FY T PL+ WHVLGLG+ SI R E+E+A+V+HY+G +KPWLEI++
Sbjct: 86796 WKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAM 86617
Query: 466 PKYRGYWNRYLNYDNPHLQQCNI 398
KYR YW +Y+ Y++P+L+ C +
Sbjct: 86616 TKYRPYWTKYVKYNHPYLRNCKL 86548
>gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula cDNA clone pDSIL-12F23, mRNA
sequence
Length = 667
Score = 123 bits (264), Expect = 2e-027
Identities = 42/95 (44%), Positives = 64/95 (67%)
Frame = -3 / +3
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W + + WK+ +LP G + FY+ T LD WHVLGLG++ SI DE+ +A+VIH
Sbjct: 6 YHYWQNKNEDQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIH 185
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCN 401
Y+G +KPWL+I++ +Y+ W +Y++ D +Q CN
Sbjct: 186 YNGNMKPWLDIALNQYKNLWTKYVDSDMEFVQMCN 290
>emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 471
Score = 122 bits (260), Expect = 8e-027
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = -3 / -1
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + FY T PL+ WHVLGLG+ ++ R +E+A+V+HY+G +KPWL I++
Sbjct: 444 WKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPTVDRSMIENAAVVHYNGNMKPWLAIAM 265
Query: 466 PKYRGYWNRYLNYDNPHLQQCNIH 395
KYR YW +Y+ Y++ +LQ+C +H
Sbjct: 264 TKYRSYWTKYVKYNHSYLQKCKLH 193
>gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula cDNA clone MtBB29G01 T7, mRNA
sequence
Length = 527
Score = 120 bits (257), Expect = 2e-026
Identities = 39/95 (41%), Positives = 66/95 (69%)
Frame = -3 / +2
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W L ++ WK +LP G + +Y+ T PLD WHVLGLG++ SI DE+ +A+V+H
Sbjct: 2 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVH 181
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCN 401
++G +KPWL+I++ +++ W++Y++ + +Q CN
Sbjct: 182 FNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 286
>gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF024D06FL 5', mRNA sequence
Length = 724
Score = 120 bits (257), Expect = 2e-026
Identities = 39/95 (41%), Positives = 66/95 (69%)
Frame = -3 / +3
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W L ++ WK +LP G + +Y+ T PLD WHVLGLG++ SI DE+ +A+V+H
Sbjct: 195 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVH 374
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCN 401
++G +KPWL+I++ +++ W++Y++ + +Q CN
Sbjct: 375 FNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 479
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 120 bits (257), Expect = 2e-026
Identities = 39/95 (41%), Positives = 66/95 (69%)
Frame = -3 / +2
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W L ++ WK +LP G + +Y+ T PLD WHVLGLG++ SI DE+ +A+V+H
Sbjct: 308 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVH 487
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCN 401
++G +KPWL+I++ +++ W++Y++ + +Q CN
Sbjct: 488 FNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 592
>gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula cDNA clone GESD-28P9, mRNA
sequence
Length = 695
Score = 118 bits (253), Expect = 8e-026
Identities = 38/95 (40%), Positives = 65/95 (68%)
Frame = -3 / +3
Query: 685 YHRWFQLGKSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIH 506
YH W L ++ WK +LP G + +Y+ T PLD WHVLG G++ SI DE+ +A+V+H
Sbjct: 174 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGFGYNPSISMDEINNAAVVH 353
Query: 505 YSGKLKPWLEISIPKYRGYWNRYLNYDNPHLQQCN 401
++G +KPWL+I++ +++ W++Y++ + +Q CN
Sbjct: 354 FNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 458
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 115 bits (245), Expect = 1e-024
Identities = 39/87 (44%), Positives = 61/87 (70%)
Frame = -3 / -2
Query: 661 KSEKXWKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPW 482
+ + WK+ +LP G + FY+ T LD WHVLGLG++ SI DE+ +A+VIHY+G +KPW
Sbjct: 46603 EDQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPW 46424
Query: 481 LEISIPKYRGYWNRYLNYDNPHLQQCN 401
L+I++ +Y+ W +Y++ D +Q CN
Sbjct: 46423 LDIALNQYKNLWTKYVDSDMEFVQMCN 46343
>gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 667
Score = 114 bits (244), Expect = 1e-024
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = -3 / -3
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK+ +LP G + FY+ T LD WHVLGLG++ SI DE+ +A+VIHY+G +KPWL+I++
Sbjct: 608 WKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIAL 429
Query: 466 PKYRGYWNRYLNYDNPHLQQCN 401
+Y+ W +Y++ D +Q CN
Sbjct: 428 NQYKNLWTKYVDSDMEFVQMCN 363
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 109 bits (232), Expect = 6e-023
Identities = 35/82 (42%), Positives = 60/82 (73%)
Frame = -3 / +3
Query: 646 WKAXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISI 467
WK +LP G + +Y+ T PLD WHVLGLG++ SI DE+ +A+V+H++G +KPWL+I++
Sbjct: 51105 WKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKPWLDIAM 51284
Query: 466 PKYRGYWNRYLNYDNPHLQQCN 401
+++ W++Y++ + +Q CN
Sbjct: 51285 TQFKPLWSKYVDVELEFVQACN 51350
>gb|CF068061.1|CF068061 EST668782 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 605
Score = 105 bits (223), Expect = 1e-021
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = -3 / +2
Query: 628 PLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISIPKYRGY 449
P G + FY+ T LD WHVLGLG++ SI DE+ +A+VIHY+G +KPWL+I++ +Y+
Sbjct: 2 PPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIALNQYKNL 181
Query: 448 WNRYLNYDNPHLQQCN 401
W +Y++ D +Q CN
Sbjct: 182 WTKYVDSDMEFVQMCN 229
>gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula cDNA clone pMHRP-53G17, mRNA
sequence
Length = 812
Score = 102 bits (218), Expect = 5e-021
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = -3 / +1
Query: 640 AXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISIPK 461
A + P + F N+ PL+ W GLGHD I + ++SA V+HY+GK+KPWL++ IP
Sbjct: 490 AAAWPASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPN 669
Query: 460 YRGYWNRYLNYDNPHLQQCNIH 395
Y+ YW +YLN ++ L +CN++
Sbjct: 670 YKSYWKKYLNKEDQLLSECNVN 735
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
Length = 127058
Score = 102 bits (218), Expect = 5e-021
Identities = 35/82 (42%), Positives = 54/82 (65%)
Frame = -3 / -3
Query: 640 AXSLPLGQVVFYNRTLPLDHRWHVLGLGHDSSIGRDELESASVIHYSGKLKPWLEISIPK 461
A + P + F N+ PL+ W GLGHD I + ++SA V+HY+GK+KPWL++ IP
Sbjct: 33141 AAAWPASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPN 32962
Query: 460 YRGYWNRYLNYDNPHLQQCNIH 395
Y+ YW +YLN ++ L +CN++
Sbjct: 32961 YKSYWKKYLNKEDQLLSECNVN 32896
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 587,602,462
Number of Sequences: 392609
Number of extensions: 6689558
Number of successful extensions: 29172
Number of sequences better than 1.0e-020: 27
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 22939906990
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)