TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115184.2.3
(1548 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ620946.1| Medicago truncatula PG3 gene for polygalact... 136 2e-058
gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKI... 175 5e-057
gb|AC126012.22| Medicago truncatula clone mth2-27p4, comple... 136 1e-051
gb|AC141110.7| Medicago truncatula clone mth2-17i10, comple... 136 1e-051
gb|AC144656.12| Medicago truncatula clone mth2-27d4, comple... 116 6e-048
gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone m... 108 6e-048
gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula c... 152 4e-044
gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower M... 146 4e-042
emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A1... 165 5e-042
gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Med... 116 2e-041
gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating ... 158 4e-041
gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula ... 144 2e-038
gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infect... 160 5e-038
emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-8... 72 7e-037
gb|AC124965.18| Medicago truncatula clone mth2-7h21, comple... 72 6e-036
gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone m... 58 4e-034
gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell cultu... 138 8e-034
gb|AC144760.27| Medicago truncatula clone mth2-8p15, comple... 82 2e-032
gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (... 60 3e-032
gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-... 61 1e-031
gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING... 60 5e-031
gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone m... 61 5e-031
gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula c... 114 1e-030
gb|CB892670.1|CB892670 EST645462 HOGA Medicago truncatula c... 79 4e-030
gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Me... 101 8e-030
gb|AC122167.8| Medicago truncatula clone mth1-10d10, comple... 60 4e-029
gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone m... 60 8e-029
gb|CG919844.1|CG919844 MBEGX10TF mth2 Medicago truncatula g... 123 6e-027
gb|CG932911.1|CG932911 MBEAS01TR mth2 Medicago truncatula g... 123 6e-027
gb|CG946149.1|CG946149 MBENN54TR mth2 Medicago truncatula g... 123 6e-027
gb|CG963606.1|CG963606 MBEID55TF mth2 Medicago truncatula g... 123 6e-027
emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2... 65 2e-025
gb|AC144805.7| Medicago truncatula clone mth2-72a11, comple... 65 4e-025
gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone m... 66 7e-025
gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula ... 98 2e-023
gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-... 57 3e-021
gb|DW016712.1|DW016712 EST1225673 MTY Medicago truncatula c... 74 3e-021
>emb|AJ620946.1| Medicago truncatula PG3 gene for polygalacturonase precursor, exons
1-4
Length = 2050
Score = 136 bits (291), Expect(5) = 2e-058
Identities = 56/116 (48%), Positives = 74/116 (63%)
Frame = -3 / +2
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
+ +V + +T I GDDCIS+G GS+ I + V CGPGHGISVGSLG+ E+ E V V
Sbjct: 1406 TDDVKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVK 1585
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CTI+ T NG+RIK++ S + + +E M NV P+IIDQ+YCP N C K
Sbjct: 1586 NCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSK 1753
Score = 56.5 bits (117), Expect(5) = 2e-058
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -3 / +2
Query: 976 IRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 833
++ I +SK FH+N+ C N D +T+ AP S NTDGIHIG S++
Sbjct: 1268 VQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRSTD 1411
Score = 55.1 bits (114), Expect(5) = 2e-058
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -3 / +2
Query: 1303 AWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNL 1172
AWK AC +T K++IP G Y +++KGPCK+ I +++DG +
Sbjct: 560 AWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTI 691
Score = 41.8 bits (85), Expect(5) = 2e-058
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3 / +2
Query: 1159 DLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCK 1022
+L+ W++ V+ +++G G DG G W++N C + CK
Sbjct: 713 ELNDASYQWVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 850
Score = 27.6 bits (54), Expect(5) = 2e-058
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 484 SKVAVNDVVFKNIHGTS 434
SK+ ++ V+FKNI GT+
Sbjct: 1855 SKIKISKVIFKNIRGTT 1905
>gb|AC146558.16| Medicago truncatula clone mth2-12a23, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 126642
Score = 175 bits (376), Expect(4) = 5e-057
Identities = 68/133 (51%), Positives = 94/133 (70%)
Frame = -3 / -1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ D++TN I + NSK H ++ C N+ + K+ +KAPGDSPNTDGI IG S+ +
Sbjct: 67230 SMKFDYITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGI 67051
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
I+S I G+DCIS+ G K ++I V CGPGHGI++GSLG+Y+DE+D+ D+ V CT
Sbjct: 67050 NITSVNIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGSLGKYEDEEDLADIIVKNCTF 66871
Query: 649 AGTTNGLRIKSYE 611
GT+NG+RIKSYE
Sbjct: 66870 NGTSNGVRIKSYE 66832
Score = 55.6 bits (115), Expect(4) = 5e-057
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -3 / -1
Query: 1138 NWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 1013
NWI + V L + G G++D QGA W N CQ + NC+ LP
Sbjct: 68154 NWINFKYVNKLMVGGGGSLDAQGAYAWKMNDCQKNPNCRPLP 68029
Score = 46.9 bits (96), Expect(4) = 5e-057
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNN 506
AS F+YE I M+NV Y I+IDQ YC N+
Sbjct: 66807 ASNFIYEDIVMENVEYHIVIDQHYCSNS 66724
Score = 32.7 bits (65), Expect(4) = 5e-057
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3 / -3
Query: 1309 LKAWKNACEATGVQKIVIPPGNY 1241
LKAW +AC+ G I+IP G Y
Sbjct: 68479 LKAWSDACKWKGKSTILIPNGTY 68411
>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
Length = 108900
Score = 136 bits (291), Expect(5) = 1e-051
Identities = 56/116 (48%), Positives = 74/116 (63%)
Frame = -3 / -3
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
+ +V + +T I GDDCIS+G GS+ I + V CGPGHGISVGSLG+ E+ E V V
Sbjct: 40279 TDDVKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVK 40100
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CTI+ T NG+RIK++ S + + +E M NV P+IIDQ+YCP N C K
Sbjct: 40099 NCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSK 39932
Score = 56.5 bits (117), Expect(5) = 1e-051
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -3 / -3
Query: 976 IRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 833
++ I +SK FH+N+ C N D +T+ AP S NTDGIHIG S++
Sbjct: 40417 VQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRSTD 40274
Score = 55.1 bits (114), Expect(5) = 1e-051
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -3 / -3
Query: 1303 AWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNL 1172
AWK AC +T K++IP G Y +++KGPCK+ I +++DG +
Sbjct: 41125 AWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTI 40994
Score = 41.8 bits (85), Expect(5) = 1e-051
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3 / -3
Query: 1159 DLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCK 1022
+L+ W++ V+ +++G G DG G W++N C + CK
Sbjct: 40972 ELNDASYQWVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 40835
Score = 27.6 bits (54), Expect(5) = 1e-051
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 484 SKVAVNDVVFKNIHGTS 434
SK+ ++ V+FKNI GT+
Sbjct: 39830 SKIKISKVIFKNIRGTT 39780
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
Length = 113345
Score = 136 bits (291), Expect(5) = 1e-051
Identities = 56/116 (48%), Positives = 74/116 (63%)
Frame = -3 / -1
Query: 841 SSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVT 662
+ +V + +T I GDDCIS+G GS+ I + V CGPGHGISVGSLG+ E+ E V V
Sbjct: 95501 TDDVKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVK 95322
Query: 661 GCTIAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVK 494
CTI+ T NG+RIK++ S + + +E M NV P+IIDQ+YCP N C K
Sbjct: 95321 NCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSK 95154
Score = 56.5 bits (117), Expect(5) = 1e-051
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -3 / -1
Query: 976 IRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 833
++ I +SK FH+N+ C N D +T+ AP S NTDGIHIG S++
Sbjct: 95639 VQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRSTD 95496
Score = 55.1 bits (114), Expect(5) = 1e-051
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = -3 / -1
Query: 1303 AWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNL 1172
AWK AC +T K++IP G Y +++KGPCK+ I +++DG +
Sbjct: 96347 AWKAACGSTTASKVIIPRGIYKIHAVDVKGPCKAPIEVQVDGTI 96216
Score = 41.8 bits (85), Expect(5) = 1e-051
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3 / -1
Query: 1159 DLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCK 1022
+L+ W++ V+ +++G G DG G W++N C + CK
Sbjct: 96194 ELNDASYQWVKFGYVDYFTLSGKGVFDGNGETAWTQNDCGKNSTCK 96057
Score = 27.6 bits (54), Expect(5) = 1e-051
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -3 / -3
Query: 484 SKVAVNDVVFKNIHGTS 434
SK+ ++ V+FKNI GT+
Sbjct: 95052 SKIKISKVIFKNIRGTT 95002
>gb|AC144656.12| Medicago truncatula clone mth2-27d4, complete sequence
Length = 102057
Score = 116 bits (248), Expect(5) = 6e-048
Identities = 48/96 (50%), Positives = 64/96 (66%)
Frame = -3 / +1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
S+ + NV + G+T LNSK H+ + CKNV+I V ++AP SPNTDGI++ S+ V
Sbjct: 69076 SISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPSRSPNTDGINVQFSTGV 69255
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGI 722
TIS +TI GDDCISI G+ + I + CGPGHGI
Sbjct: 69256 TISHSTIMTGDDCISINQGTTHVWIDRIACGPGHGI 69363
Score = 65.2 bits (136), Expect(5) = 6e-048
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -3 / +2
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIII 1190
+++A GAK DG DST L AW AC++ I +P G++L + GPC + I
Sbjct: 68015 INVASFGAKSDGTQDSTKPFLSAWSLACKSNEASTIYVPQGSFLLKQVSFWGPCLNKIDF 68194
Query: 1189 RLDGNLL 1169
++DG ++
Sbjct: 68195 KIDGTIV 68215
Score = 43.7 bits (89), Expect(5) = 6e-048
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -3 / +3
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKY 350
S V ++ V +++I GTS +P AI +C+ + PC G++L ++++ Y
Sbjct: 70908 SGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIY 71042
Score = 40.5 bits (82), Expect(5) = 6e-048
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSY 614
S+GSLG +E VE+V VT T NG+RIKS+
Sbjct: 69936 SIGSLGSDSNEAGVENVTVTDSVFTKTQNGVRIKSW 70043
Score = 38.2 bits (77), Expect(5) = 6e-048
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3 / +3
Query: 574 YEGITMDNVSYPIIIDQKYCPNNIC 500
+ + M NV YPIIIDQ+YC C
Sbjct: 70080 FRNLIMQNVYYPIIIDQRYCTKTDC 70154
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
sequence
Length = 132817
Score = 108 bits (230), Expect(5) = 6e-048
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = -3 / +1
Query: 832 VTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCT 653
+ I+S+ I GDDCISIG GSK I I V CGPGHGISVGSLG+Y +E+ +E + V CT
Sbjct: 15571 INITSSYISTGDDCISIGDGSKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNCT 15750
Query: 652 IAGTTNGLRIKSY 614
+ T NGLRIK++
Sbjct: 15751 LRNTDNGLRIKTW 15789
Score = 57.0 bits (118), Expect(5) = 6e-048
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3 / +3
Query: 1312 ILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGTGDLS 1151
++ WK AC +T KI+IP G Y + L+GPC + I I++DG + DL+
Sbjct: 14880 LIATWKEACASTSSSKILIPKGTYKLKQVNLRGPCNAPIEIQVDGTIEAPADLT 15041
Score = 52.8 bits (109), Expect(5) = 6e-048
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -3 / +3
Query: 994 FVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNT 863
F+ N I+GIT +SK+FH+N+F CKN+ + AP SPN+
Sbjct: 15411 FLNNSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATSPNS 15542
Score = 47.3 bits (97), Expect(5) = 6e-048
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = -3 / +2
Query: 505 ICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVD 359
I + + K+ ++ V FK+I GTS T + L C++ +PC+ V L N+D
Sbjct: 16025 ISLLQSSLKIKISKVTFKDITGTSATQNGVVLICSSGVPCEEVVLSNID 16171
Score = 40.0 bits (81), Expect(5) = 6e-048
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKIL 1016
WI + +++G GT DG G + W +N C + NC +L
Sbjct: 15063 WIIFGYFDFFTLSGVGTFDGLGEVAWKQNGCGKNKNCNML 15182
>gb|AJ848515.1|AJ848515 AJ848515 MtSN4 Medicago truncatula cDNA clone MtN408H03N1, mRNA
sequence
Length = 677
Score = 152 bits (327), Expect(3) = 4e-044
Identities = 64/149 (42%), Positives = 89/149 (59%)
Frame = -3 / -1
Query: 1024 KILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIG 845
K P +L V + GIT+ NS+ HL C NV + +T +PGDSPNTDGIH+
Sbjct: 563 KTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQ 384
Query: 844 DSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQV 665
+S +V IS +T+ GDDC+SI G I +H V CGPGHGIS+GSLG+ + V +V V
Sbjct: 383 NSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTV 204
Query: 664 TGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
T+ T G+RIK+++ S++ F
Sbjct: 203 RDVTLQNTLTGVRIKTWQGGSGSVQNIMF 117
Score = 37.7 bits (76), Expect(3) = 4e-044
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3 / -1
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQ 1046
W+E + ++I G G IDGQG++ W+ ++
Sbjct: 662 WLEFTKLNKITIKGKGVIDGQGSVWWNDSE 573
Score = 29.0 bits (57), Expect(3) = 4e-044
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 577 LYEGITMDNVSYPIIIDQKYCPNNIC 500
++ I + +V PI+IDQ YC C
Sbjct: 122 MFSNIQVSDVKTPIMIDQFYCDGGKC 45
>gb|BQ148150.1|BQ148150 NF062C04FL1F1034 Developing flower Medicago truncatula cDNA clone
NF062C04FL 5', mRNA sequence
Length = 669
Score = 146 bits (314), Expect(2) = 4e-042
Identities = 56/119 (47%), Positives = 79/119 (66%)
Frame = -3 / +2
Query: 1042 QHSYNCKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNT 863
Q+ NC LP+SL D + N ++ +T LNS FH ++ C N+ + + APG+SPNT
Sbjct: 245 QNKGNCASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNT 424
Query: 862 DGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEK 686
DG+HI S +T++++ I GDDCIS+G + I I G+ CGPGHGISVGSLG+ +EK
Sbjct: 425 DGMHISSSDFITVTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEK 601
Score = 47.8 bits (98), Expect(2) = 4e-042
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3 / +2
Query: 1147 YQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHS 1034
Y W + EN++ L + G G DGQG++ W N C+ +
Sbjct: 137 YSPEWFQFENIDGLVLKGSGVFDGQGSISWPLNDCKQN 250
>emb|CR297946.1| mte1-15M11FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 708
Score = 165 bits (354), Expect(2) = 5e-042
Identities = 66/133 (49%), Positives = 93/133 (69%)
Frame = -3 / +3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ DF+TN + + ++SK H +F C+N+L+ + + AP DSPNTDGI IG S +
Sbjct: 165 TMKFDFITNGYVHDMHSIDSKQSHFVLFGCENMLLRGLKITAPKDSPNTDGIKIGMSKGI 344
Query: 829 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 650
ISS IG GDDCI++ G++ +RI V CGPGHGISVGSLG + E+D++D+ V CT
Sbjct: 345 NISSVNIGTGDDCIAMLSGTRNVRISDVFCGPGHGISVGSLGGNEGEEDIDDIVVKNCTF 524
Query: 649 AGTTNGLRIKSYE 611
GT+NG+RIKS+E
Sbjct: 525 NGTSNGVRIKSWE 563
Score = 29.0 bits (57), Expect(2) = 5e-042
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / +1
Query: 541 PIIIDQKYCPNNICVKSGAS 482
PI+IDQ YC + C+K S
Sbjct: 637 PIVIDQDYCSHPPCIKKVCS 696
>gb|BG452808.1|BG452808 NF081A01LF1F1001 Developing leaf Medicago truncatula cDNA clone
NF081A01LF 5', mRNA sequence
Length = 583
Score = 116 bits (248), Expect(2) = 2e-041
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = -3 / +2
Query: 877 DSPNTDGIHIGDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRY 698
DSPNTDGIHI +S+NV + IG GDDCISI S I++ + CGPGHGIS+GSLG+
Sbjct: 2 DSPNTDGIHISESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKD 181
Query: 697 KDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
V V + + GTTNGLRIK+++ +K +F
Sbjct: 182 NSTGVVTKVILDTAFLKGTTNGLRIKTWQGGAGYVKGVRF 301
Score = 75.8 bits (159), Expect(2) = 2e-041
Identities = 24/74 (32%), Positives = 53/74 (71%)
Frame = -3 / +2
Query: 574 YEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANN 395
++ + ++NVS PI+IDQ YC + ++ +S + +++++++N+ GT+N+ +AI +C++
Sbjct: 299 FQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDT 478
Query: 394 LPCQGVQLVNVDIK 353
+PC + L NVD++
Sbjct: 479 VPCSNLVLSNVDLE 520
>gb|CX539149.1|CX539149 s13dNF60F08GS063_461558 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 614
Score = 158 bits (339), Expect(2) = 4e-041
Identities = 67/137 (48%), Positives = 89/137 (64%)
Frame = -3 / +3
Query: 1027 CKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHI 848
C P SL V N I GI +N K FH+ + +C N+ + ++ + AP SPNTDGIHI
Sbjct: 204 CVPNPPSLYFTKVQNAIIMGIKSVNPKGFHVFVTQCSNIRLQRLRLTAPDTSPNTDGIHI 383
Query: 847 GDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQ 668
S V I+ TIG GDDC+ + GS+ I I+ ++CGPGHGIS+GSLGR DE++V+ V+
Sbjct: 384 STSYGVKINRCTIGTGDDCVGMIDGSEQIAINKLECGPGHGISIGSLGRRADEREVKGVR 563
Query: 667 VTGCTIAGTTNGLRIKS 617
V + GT NGLRIKS
Sbjct: 564 VQNSELIGTDNGLRIKS 614
Score = 32.7 bits (65), Expect(2) = 4e-041
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVW 1058
W E +++ L + G GT DGQG W
Sbjct: 84 WFEFQDLNGLKMLGGGTFDGQGQESW 161
>gb|BG588797.1|BG588797 EST490606 MHRP- Medicago truncatula cDNA clone pMHRP-57F15, mRNA
sequence
Length = 631
Score = 144 bits (308), Expect(3) = 2e-038
Identities = 56/123 (45%), Positives = 81/123 (65%)
Frame = -3 / +2
Query: 982 VQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGV 803
++++ + +S+ H+ C NV + + V+AP DSPNTDGIH+ ++ N+ I + IG
Sbjct: 2 LKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGT 181
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRI 623
GDDCISI GSK +R + CGPGHGIS+GSLG E +V +V V + GTTNG+RI
Sbjct: 182 GDDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRI 361
Query: 622 KSY 614
K++
Sbjct: 362 KTW 370
Score = 31.3 bits (62), Expect(3) = 2e-038
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3 / +1
Query: 520 YCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQ 383
YC + V ++ V+++NI GTS + AI NC+ Q
Sbjct: 460 YCDQTEPCQERNKAVQLSQVLYQNIRGTSASEIAIKFNCSRKRSLQ 597
Score = 24.9 bits (48), Expect(3) = 2e-038
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQ 524
A + I M NV+ P+IIDQ
Sbjct: 390 ARNIKFMNIKMQNVTNPVIIDQ 455
>gb|CX524955.1|CX524955 s13dNF13H06AT060_478544 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 542
Score = 160 bits (344), Expect = 5e-038
Identities = 67/150 (44%), Positives = 95/150 (63%)
Frame = -3 / +1
Query: 1027 CKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHI 848
CK P +L +D ++++++G+T+ NS+ H I C +V I V V +PGDSPNTDGIHI
Sbjct: 67 CKGAPTALTIDTSSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASPGDSPNTDGIHI 246
Query: 847 GDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQ 668
+S+NV + IG GDDCISI S I++ + CGPGHGIS+GSLG+ V V
Sbjct: 247 SESTNVIVQDCKIGTGDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVI 426
Query: 667 VTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
+ + GTTNGLRIK+++ +K +F
Sbjct: 427 LDTAFLKGTTNGLRIKTWQGGAGYVKGVRF 516
>emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-85A3 on chromosome 3,
complete sequence
Length = 78707
Score = 71.6 bits (150), Expect(6) = 7e-037
Identities = 31/70 (44%), Positives = 42/70 (60%)
Frame = -3 / +3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ D N+++ I N++ HL I C NV + V APG SPNTDGIHI S NV
Sbjct: 53088 AVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNV 53267
Query: 829 TISSTTIGVG 800
I+++TIG G
Sbjct: 53268 FITNSTIGTG 53297
Score = 50.6 bits (104), Expect(6) = 7e-037
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / +1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSL 707
GDDCISI GSK +R + CGPGHGI SL
Sbjct: 53770 GDDCISIVSGSKNVRATDITCGPGHGIRYHSL 53865
Score = 47.3 bits (97), Expect(6) = 7e-037
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -3 / +3
Query: 499 VKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDI 356
VK S V +++V+++NI GTS + AI L C+ +PC+G+ L +V I
Sbjct: 55443 VKLQNSAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 55586
Score = 44.6 bits (91), Expect(6) = 7e-037
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG + +V +V+V T+ GTTNG+RIK+++
Sbjct: 53940 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTWQ 54050
Score = 41.8 bits (85), Expect(6) = 7e-037
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3 / +1
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
A ++ WI+ ENV NL ++G GTI+G G + W +
Sbjct: 52324 ADRKLWIKFENVTNLIVDGGGTINGNGRIWWENS 52425
Score = 32.2 bits (64), Expect(6) = 7e-037
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYC 515
A + I + NV+ PIIIDQKYC
Sbjct: 54779 ARNIKFINIVVRNVTNPIIIDQKYC 54853
>gb|AC124965.18| Medicago truncatula clone mth2-7h21, complete sequence
Length = 122160
Score = 71.6 bits (150), Expect(6) = 6e-036
Identities = 31/70 (44%), Positives = 42/70 (60%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ D N+++ I N++ HL I C NV + V APG SPNTDGIHI S NV
Sbjct: 15640 AVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNV 15461
Query: 829 TISSTTIGVG 800
I+++TIG G
Sbjct: 15460 FITNSTIGTG 15431
Score = 50.6 bits (104), Expect(6) = 6e-036
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3 / -1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSL 707
GDDCISI GSK +R + CGPGHGI SL
Sbjct: 14958 GDDCISIVSGSKNVRATDITCGPGHGIRYHSL 14863
Score = 47.3 bits (97), Expect(6) = 6e-036
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -3 / -2
Query: 499 VKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDI 356
VK S V +++V+++NI GTS + AI L C+ +PC+G+ L +V I
Sbjct: 13286 VKLQNSAVELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKI 13143
Score = 44.6 bits (91), Expect(6) = 6e-036
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = -3 / -3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG + +V +V+V T+ GTTNG+RIK+++
Sbjct: 14788 SIGSLGGGNTQAEVSNVEVNRATLIGTTNGVRIKTWQ 14678
Score = 41.8 bits (85), Expect(6) = 6e-036
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 1150 AYQRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
A ++ WI+ ENV NL ++G GTI+G G + W +
Sbjct: 16404 ADRKLWIKFENVTNLIVDGGGTINGNGRIWWENS 16303
Score = 32.2 bits (64), Expect(6) = 6e-036
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3 / -2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYC 515
A + I + NV+ PIIIDQKYC
Sbjct: 13949 ARNIKFINIVVRNVTNPIIIDQKYC 13875
>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
sequence
Length = 128810
Score = 57.9 bits (120), Expect(5) = 4e-034
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = -3 / +2
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+++ + +NS H++I C + LI + + AP DSPNTDGI I S+N+++ + I
Sbjct: 25406 NLKLGPLKHINSPRNHISIVGCNDALISNLHIIAPKDSPNTDGIDISTSTNISVQHSIIS 25585
Query: 805 VG 800
G
Sbjct: 25586 TG 25591
Score = 47.8 bits (98), Expect(5) = 4e-034
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3 / +1
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDCI+I G++ I I ++CGPGHGI
Sbjct: 25693 IGDDCIAINNGTEFIYITDIQCGPGHGI 25776
Score = 42.3 bits (86), Expect(5) = 4e-034
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3 / +2
Query: 478 VAVNDVVFKNIHGTSNTPEAITLNCA 401
V V+DV+F+NI GT+N +AI LNCA
Sbjct: 26225 VKVSDVIFRNIRGTTNGKDAIDLNCA 26302
Score = 42.3 bits (86), Expect(5) = 4e-034
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = -3 / +1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSY 614
SVGSLG+ D VE++ V+ T TTNG RIK++
Sbjct: 25873 SVGSLGKDGDYSTVEEIHVSNITFRETTNGARIKTW 25980
Score = 29.5 bits (58), Expect(5) = 4e-034
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKY 518
A K YE I + V P+IIDQ+Y
Sbjct: 26096 ARKITYEDIIVFKVENPVIIDQQY 26167
>gb|BF645495.1|BF645495 NF020D02EC1F1025 Elicited cell culture Medicago truncatula cDNA
clone NF020D02EC 5', mRNA sequence
Length = 680
Score = 138 bits (295), Expect(2) = 8e-034
Identities = 56/121 (46%), Positives = 74/121 (61%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N + GIT+ NS HL C VL+ VT+ +PGDSPNTDGIH+ +S +V I +T+
Sbjct: 318 NPTVTGITIQNSPQCHLKFDNCNGVLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMA 497
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLR 626
GDDCISI G + +H V CGPGHGIS+G LG+ V ++ V + T NG+R
Sbjct: 498 CGDDCISIQTGCSNVYVHNVDCGPGHGISIGGLGKDNTRACVSNITVRDVNMHNTMNGVR 677
Query: 625 I 623
I
Sbjct: 678 I 680
Score = 31.8 bits (63), Expect(2) = 8e-034
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQ 1046
W++ + +I G+G DG+G++ W Q
Sbjct: 84 WLDFTKLVGFTIQGNGIFDGRGSVWWQDTQ 173
>gb|AC144760.27| Medicago truncatula clone mth2-8p15, complete sequence
Length = 108569
Score = 82.2 bits (173), Expect(5) = 2e-032
Identities = 32/65 (49%), Positives = 43/65 (66%)
Frame = -3 / -2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLR 626
VGDDC+SI G I +H V CGPGHGIS+GSLG+ + V +V V T+ T G+R
Sbjct: 33763 VGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNVTVRDVTLQNTLTGVR 33584
Query: 625 IKSYE 611
IK+++
Sbjct: 33583 IKTWQ 33569
Score = 74.4 bits (156), Expect(5) = 2e-032
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = -3 / -1
Query: 982 VQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGV 803
V + GIT+ NS+ HL C NV + +T +PGDSPNTDGIH+ +S +V IS +T+
Sbjct: 34025 VSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSC 33846
Query: 802 G 800
G
Sbjct: 33845 G 33843
Score = 37.7 bits (76), Expect(5) = 2e-032
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3 / -3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQ 1046
W+E + ++I G G IDGQG++ W+ ++
Sbjct: 34650 WLEFTKLNKITIKGKGVIDGQGSVWWNDSE 34561
Score = 29.0 bits (57), Expect(5) = 2e-032
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3 / -3
Query: 577 LYEGITMDNVSYPIIIDQKYCPNNIC 500
++ I + +V PI+IDQ YC C
Sbjct: 33003 MFSNIQVSDVKTPIMIDQFYCDGGKC 32926
Score = 27.6 bits (54), Expect(5) = 2e-032
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3 / -3
Query: 1366 DIAQLGAKGDGKSDSTPMI 1310
++ GAKGDG SD T +I
Sbjct: 36153 NVLDFGAKGDGHSDDTKVI 36097
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds
Length = 68460
Score = 59.7 bits (124), Expect(5) = 6e-031
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
A K YE IT+ V+ PIIIDQ Y S V V+DV F+ GT+N +AI L
Sbjct: 43780 ARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRKGVKVSDVTFRGFRGTANEKDAIEL 43959
Query: 409 NCA 401
NCA
Sbjct: 43960 NCA 43968
Score = 57.4 bits (119), Expect(6) = 3e-032
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -3 / +2
Query: 958 LNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVG 800
+NS H+++ CKN I + + AP SPNTDGI I S+N+ I ++TI G
Sbjct: 49757 MNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 49915
Score = 56.1 bits (116), Expect(5) = 6e-031
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = -3 / +1
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+++ + ++S H++I +C LI + + AP +SPNTDGI I S+N+ I +TI
Sbjct: 43102 NLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDISRSTNIIIEHSTIS 43281
Query: 805 VG 800
G
Sbjct: 43282 TG 43287
Score = 52.4 bits (108), Expect(5) = 6e-031
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3 / +2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDCI+I GSK I I + CGPGHGI
Sbjct: 43358 IGDDCIAINSGSKFINITAINCGPGHGI 43441
Score = 50.1 bits (103), Expect(6) = 3e-032
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3 / +1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
SVGSLG+ VEDV+V CT GT+NG RIK++E
Sbjct: 50386 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFE 50496
Score = 50.1 bits (103), Expect(6) = 3e-032
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / +2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VGDDCI+I GS +I I G CGPGHGI
Sbjct: 50198 VGDDCIAINNGSSVITITGTFCGPGHGI 50281
Score = 40.5 bits (82), Expect(6) = 3e-032
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -3 / +1
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDI 356
S V ++DV + NI GTS AI L C N+ C + L +++I
Sbjct: 50770 SAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINI 50898
Score = 40.0 bits (81), Expect(6) = 3e-032
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3 / +2
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSK 1052
WI+ + L +NG G IDGQG+ W K
Sbjct: 49490 WIQFSKISGLVVNGEGNIDGQGSPWWDK 49573
Score = 38.2 bits (77), Expect(5) = 6e-031
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVW 1058
WI +++ L I+G GT DGQGA W
Sbjct: 42837 WISFSHIKGLIISGEGTFDGQGASWW 42914
Score = 36.8 bits (74), Expect(5) = 6e-031
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3 / +1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSY 614
SVGSLG+ VE+V V+ GT NG RIK++
Sbjct: 43549 SVGSLGKDGKYATVEEVHVSHSIFTGTENGARIKTW 43656
Score = 33.1 bits (66), Expect(6) = 3e-032
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPN 509
A YE I ++ V P+IIDQ Y PN
Sbjct: 50683 ARNITYEDIILNEVKNPVIIDQAYNPN 50763
>gb|AC148969.4| Medicago truncatula chromosome 2 clone mth2-58p1, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 80270
Score = 61.1 bits (127), Expect(6) = 1e-031
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
++++R +T+LNS+ H+ C V+ ++ V AP SPNTDGIHI + V I + I
Sbjct: 9006 SLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIR 9185
Query: 805 VG 800
G
Sbjct: 9186 TG 9191
Score = 59.7 bits (124), Expect(3) = 1e-024
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ L+ QI+G T +N H+ + CK +I + + APG+SPNTDGI I S ++
Sbjct: 915 AITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDI 736
Query: 829 TISSTTIGVGD 797
+ ++ I G+
Sbjct: 735 QVLNSFIATGN 703
Score = 51.5 bits (106), Expect(3) = 1e-024
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3 / -3
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VGDDCI+I GS +I+I + CGPGHGI
Sbjct: 639 VGDDCIAISAGSSVIKITAITCGPGHGI 556
Score = 50.1 bits (103), Expect(6) = 1e-031
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = -3 / +3
Query: 502 CVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGN 335
C+ S V V ++ F NI GTS T E I C++ PC+G+ L N+ ++ GN
Sbjct: 10707 CIVMQTSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGN 10874
Score = 44.1 bits (90), Expect(6) = 1e-031
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISI S + I + CGPGHGI
Sbjct: 9968 GDDCISIVRNSSRVWIRNISCGPGHGI 10048
Score = 41.8 bits (85), Expect(3) = 1e-024
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -3 / -3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKS 617
S+GSLG D VEDV V CT+ T G+RIK+
Sbjct: 459 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT 355
Score = 40.9 bits (83), Expect(6) = 1e-031
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYC 515
ASK ++ I M+NVS PIIIDQ YC
Sbjct: 10353 ASKITFQNILMENVSNPIIIDQYYC 10427
Score = 38.2 bits (77), Expect(6) = 1e-031
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
+R WI V +LS+ G G IDG G WS++
Sbjct: 8644 KRKWIYFHGVNHLSVEGGGRIDGMGQEWWSRS 8739
Score = 35.4 bits (71), Expect(6) = 1e-031
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG+ + +++V V G + T NG+RIK+++
Sbjct: 10137 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTWQ 10247
>gb|AC166237.5| Medicago truncatula clone mth2-6a22, WORKING DRAFT SEQUENCE, 13 ordered
pieces
Length = 127651
Score = 59.7 bits (124), Expect(5) = 6e-030
Identities = 29/63 (46%), Positives = 35/63 (55%)
Frame = -3 / -3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITL 410
A K YE IT+ V+ PIIIDQ Y S V V+DV F+ GT+N +AI L
Sbjct: 120401 ARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRKGVKVSDVTFRGFRGTANEKDAIEL 120222
Query: 409 NCA 401
NCA
Sbjct: 120221 NCA 120213
Score = 57.4 bits (119), Expect(6) = 5e-031
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -3 / -2
Query: 958 LNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVG 800
+NS H+++ CKN I + + AP SPNTDGI I S+N+ I ++TI G
Sbjct: 115938 MNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETG 115780
Score = 56.1 bits (116), Expect(5) = 6e-030
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = -3 / -3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+++ + ++S H++I +C LI + + AP +SPNTDGI I S+N+ I +TI
Sbjct: 121079 NLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDISRSTNIIIEHSTIS 120900
Query: 805 VG 800
G
Sbjct: 120899 TG 120894
Score = 52.4 bits (108), Expect(5) = 6e-030
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDCI+I GSK I I + CGPGHGI
Sbjct: 120823 IGDDCIAINSGSKFINITAINCGPGHGI 120740
Score = 50.1 bits (103), Expect(6) = 5e-031
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3 / -1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
SVGSLG+ VEDV+V CT GT+NG RIK++E
Sbjct: 115309 SVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFE 115199
Score = 50.1 bits (103), Expect(6) = 5e-031
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -3 / -2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VGDDCI+I GS +I I G CGPGHGI
Sbjct: 115497 VGDDCIAINNGSSVITITGTFCGPGHGI 115414
Score = 40.5 bits (82), Expect(6) = 5e-031
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -3 / -1
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDI 356
S V ++DV + NI GTS AI L C N+ C + L +++I
Sbjct: 114925 SAVEISDVTYSNIRGTSVGEYAIELKCELNIGCNNIVLDHINI 114797
Score = 40.0 bits (81), Expect(6) = 5e-031
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3 / -2
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSK 1052
WI+ + L +NG G IDGQG+ W K
Sbjct: 116205 WIQFSKISGLVVNGEGNIDGQGSPWWDK 116122
Score = 38.2 bits (77), Expect(5) = 6e-030
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 1135 WIEIENVENLSINGHGTIDGQGALVW 1058
WI +++ L I+G GT DGQGA W
Sbjct: 121344 WISFSHIKGLIISGEGTFDGQGASWW 121267
Score = 36.8 bits (74), Expect(5) = 6e-030
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSY 614
SVGSLG+ VE+V V+ GT NG RIK++
Sbjct: 120632 SVGSLGKDGKYATVEEVHVSHSIFTGTENGARIKTW 120525
Score = 33.1 bits (66), Expect(6) = 5e-031
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3 / -1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPN 509
A YE I ++ V P+IIDQ Y PN
Sbjct: 115012 ARNITYEDIILNEVKNPVIIDQAYNPN 114932
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
sequence
Length = 105618
Score = 61.1 bits (127), Expect(6) = 5e-031
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
++++R +T+LNS+ H+ C V+ ++ V AP SPNTDGIHI + V I + I
Sbjct: 71265 SLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIR 71444
Query: 805 VG 800
G
Sbjct: 71445 TG 71450
Score = 50.1 bits (103), Expect(6) = 5e-031
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = -3 / +3
Query: 502 CVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGN 335
C+ S V V ++ F NI GTS T E I C++ PC+G+ L N+ ++ GN
Sbjct: 72966 CIVMQTSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGN 73133
Score = 44.1 bits (90), Expect(6) = 5e-031
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISI S + I + CGPGHGI
Sbjct: 72227 GDDCISIVRNSSRVWIRNISCGPGHGI 72307
Score = 40.9 bits (83), Expect(6) = 5e-031
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3 / +3
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYC 515
ASK ++ I M+NVS PIIIDQ YC
Sbjct: 72612 ASKITFQNILMENVSNPIIIDQYYC 72686
Score = 38.2 bits (77), Expect(6) = 5e-031
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
+R WI V +LS+ G G IDG G WS++
Sbjct: 70903 KRKWIYFHGVNHLSVEGGGRIDGMGQEWWSRS 70998
Score = 35.4 bits (71), Expect(6) = 5e-031
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYE 611
S+GSLG+ + +++V V G + T NG+RIK+++
Sbjct: 72396 SIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTWQ 72506
>gb|CA989936.1|CA989936 EST643444 GESD Medicago truncatula cDNA clone GESD-21D12, mRNA
sequence
Length = 724
Score = 114 bits (244), Expect(3) = 1e-030
Identities = 47/129 (36%), Positives = 73/129 (56%)
Frame = -3 / +1
Query: 976 IRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGVGD 797
I G+T +N H+ + + +++ I + + +P S NTDGI + + V I I GD
Sbjct: 1 INGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDLTRTIGVNIHDIQIESGD 180
Query: 796 DCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKS 617
DCI++ GS+ + + V CGPGHGISVGSLG + E+ V+ V CT G + ++IK+
Sbjct: 181 DCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGHGSEEFVQHFSVKNCTFNGADSAVKIKT 360
Query: 616 YEDSKSSLK 590
+ K K
Sbjct: 361 WPGGKGYAK 387
Score = 30.4 bits (60), Expect(3) = 1e-030
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 478 VAVNDVVFKNIHGTSNTPEAITLNCA 401
V ++++ F NI+GT +A+ L+CA
Sbjct: 481 VKISNITFSNIYGTCIGEDAVVLDCA 558
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3 / +1
Query: 589 ASKFLYEGITMDNVSYPIIIDQKY 518
A ++E I ++ +YP+ IDQ Y
Sbjct: 382 AKHIIFEDIIINQTNYPVFIDQHY 453
>gb|CB892670.1|CB892670 EST645462 HOGA Medicago truncatula cDNA clone HOGA-19M10, mRNA
sequence
Length = 786
Score = 78.5 bits (165), Expect(2) = 4e-030
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = -3 / +1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRI 623
GDDCISI S I++ + CGPGHGIS+GSLG+ V V + + GTTNGLRI
Sbjct: 1 GDDCISIVNASSNIKMKRIFCGPGHGISIGSLGKDNSTGVVTKVILDTAFLKGTTNGLRI 180
Query: 622 KSYEDSKSSLKASKF 578
K+++ +K +F
Sbjct: 181 KTWQGGAGYVKGVRF 225
Score = 75.8 bits (159), Expect(2) = 4e-030
Identities = 24/74 (32%), Positives = 53/74 (71%)
Frame = -3 / +1
Query: 574 YEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAVNDVVFKNIHGTSNTPEAITLNCANN 395
++ + ++NVS PI+IDQ YC + ++ +S + +++++++N+ GT+N+ +AI +C++
Sbjct: 223 FQNVRVENVSNPILIDQFYCDSPTSCQNQSSALEISEIMYQNVSGTTNSAKAIKFDCSDT 402
Query: 394 LPCQGVQLVNVDIK 353
+PC + L NVD++
Sbjct: 403 VPCSNLVLSNVDLE 444
>gb|AJ388838.1|AJ388838 AJ388838 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo204 similar to polygalacturonase precursor
(pectinase), mRNA sequence
Length = 500
Score = 101 bits (216), Expect(3) = 8e-030
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = -3 / +1
Query: 1027 CKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHI 848
CK P +L +D ++++++G+T+ N++ H I C +V I V V +PGDSPNTDGIHI
Sbjct: 136 CKGAPTALTIDTSSSIKVKGLTIQNNQQMHFTISRCDSVRILGVKVASPGDSPNTDGIHI 315
Query: 847 GDSSNVTISSTTIGVGDDCISIGPG 773
+S+NV + IG GDDCISI G
Sbjct: 316 SESTNVIVQDCKIGTGDDCISIVNG 390
Score = 40.0 bits (81), Expect(3) = 8e-030
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -3 / +2
Query: 772 SKMIRIHGVKCGPGHGISVGSLGR 701
S I++ + CGPGHGIS+GSLG+
Sbjct: 392 SSNIKMKRIFCGPGHGISIGSLGK 463
Score = 29.0 bits (57), Expect(3) = 8e-030
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3 / +1
Query: 1141 RNWIEIENVENLSINGHGTIDGQGALVWS 1055
R W++ ++ G G IDG G+ W+
Sbjct: 19 RVWLDFSKLKKAVFQGSGVIDGSGSKWWA 105
>gb|AC122167.8| Medicago truncatula clone mth1-10d10, complete sequence
Length = 93126
Score = 59.7 bits (124), Expect(5) = 4e-029
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -3 / -1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ L+ QI+G T +N H+ + CK +I + + APG+SPNTDGI I S ++
Sbjct: 27369 AITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDI 27190
Query: 829 TISSTTIGVGD 797
+ ++ I G+
Sbjct: 27189 QVLNSFIATGN 27157
Score = 51.5 bits (106), Expect(5) = 4e-029
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3 / -1
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VGDDCI+I GS +I+I + CGPGHGI
Sbjct: 27093 VGDDCIAISAGSSVIKITAITCGPGHGI 27010
Score = 50.1 bits (103), Expect(5) = 4e-029
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = -3 / -1
Query: 478 VAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGK 299
+ V+DV ++ I GTS T +AI LNC N+ C + V ++ K + C NA G+
Sbjct: 26451 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 26272
Query: 298 SIGLAKELACI 266
+ L C+
Sbjct: 26271 ASHTKPILNCL 26239
Score = 41.8 bits (85), Expect(5) = 4e-029
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -3 / -1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKS 617
S+GSLG D VEDV V CT+ T G+RIK+
Sbjct: 26913 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT 26809
Score = 35.4 bits (71), Expect(5) = 4e-029
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3 / -3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSK 1052
WI V L I+G GT+DG+G++ W +
Sbjct: 27733 WIGFSFVNGLIISGKGTVDGRGSMWWKQ 27650
>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
sequence
Length = 113539
Score = 59.7 bits (124), Expect(5) = 8e-029
Identities = 24/71 (33%), Positives = 41/71 (57%)
Frame = -3 / -3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
++ L+ QI+G T +N H+ + CK +I + + APG+SPNTDGI I S ++
Sbjct: 60656 AITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDI 60477
Query: 829 TISSTTIGVGD 797
+ ++ I G+
Sbjct: 60476 QVLNSFIATGN 60444
Score = 51.5 bits (106), Expect(5) = 8e-029
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -3 / -3
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
VGDDCI+I GS +I+I + CGPGHGI
Sbjct: 60380 VGDDCIAISAGSSVIKITAITCGPGHGI 60297
Score = 50.1 bits (103), Expect(5) = 8e-029
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = -3 / -3
Query: 478 VAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNGSGNKTMAVCKNAIGK 299
+ V+DV ++ I GTS T +AI LNC N+ C + V ++ K + C NA G+
Sbjct: 59738 IKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFSFCHNAHGR 59559
Query: 298 SIGLAKELACI 266
+ L C+
Sbjct: 59558 ASHTKPILNCL 59526
Score = 41.8 bits (85), Expect(5) = 8e-029
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -3 / -3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKS 617
S+GSLG D VEDV V CT+ T G+RIK+
Sbjct: 60200 SIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT 60096
Score = 35.4 bits (71), Expect(5) = 8e-029
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSK 1052
WI V L I+G GT+DG+G++ W +
Sbjct: 61020 WIGFSFVNGLIISGKGTVDGRGSMWWKQ 60937
>gb|CG919844.1|CG919844 MBEGX10TF mth2 Medicago truncatula genomic clone 53B20, DNA
sequence
Length = 762
Score = 123 bits (264), Expect = 6e-027
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+ I G+T LNS+ FH+ I EC+NV +D V + AP +SPNTDGIH+ SS++TI I
Sbjct: 417 NIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIR 596
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISIGP ++ + I V+CGPGHGI
Sbjct: 597 TGDDCISIGPSTRNLWIEHVECGPGHGI 680
>gb|CG932911.1|CG932911 MBEAS01TR mth2 Medicago truncatula genomic clone 15B1, DNA sequence
Length = 771
Score = 123 bits (264), Expect = 6e-027
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+ I G+T LNS+ FH+ I EC+NV +D V + AP +SPNTDGIH+ SS++TI I
Sbjct: 375 NIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIR 554
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISIGP ++ + I V+CGPGHGI
Sbjct: 555 TGDDCISIGPSTRNLWIEHVECGPGHGI 638
>gb|CG946149.1|CG946149 MBENN54TR mth2 Medicago truncatula genomic clone 9I12, DNA sequence
Length = 910
Score = 123 bits (264), Expect = 6e-027
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+ I G+T LNS+ FH+ I EC+NV +D V + AP +SPNTDGIH+ SS++TI I
Sbjct: 411 NIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIR 590
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISIGP ++ + I V+CGPGHGI
Sbjct: 591 TGDDCISIGPSTRNLWIEHVECGPGHGI 674
>gb|CG963606.1|CG963606 MBEID55TF mth2 Medicago truncatula genomic clone 60J14, DNA
sequence
Length = 915
Score = 123 bits (264), Expect = 6e-027
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = -3 / +3
Query: 985 NVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIG 806
N+ I G+T LNS+ FH+ I EC+NV +D V + AP +SPNTDGIH+ SS++TI I
Sbjct: 417 NIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIR 596
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISIGP ++ + I V+CGPGHGI
Sbjct: 597 TGDDCISIGPSTRNLWIEHVECGPGHGI 680
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE
Length = 128654
Score = 65.2 bits (136), Expect(6) = 2e-025
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = -3 / -1
Query: 982 VQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTIGV 803
V+IR I + NS HL K + +D +T+ +P +SPNTDGIH+ ++ +V I + IG
Sbjct: 48236 VKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGT 48057
Query: 802 G 800
G
Sbjct: 48056 G 48054
Score = 51.0 bits (105), Expect(6) = 2e-025
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDC+SI G I +H +KCGPGHGI
Sbjct: 47567 GDDCVSIQTGCSNIHVHHIKCGPGHGI 47487
Score = 42.8 bits (87), Expect(6) = 2e-025
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -3 / -1
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQ 1046
WI + V+N +I G+GTIDGQG+ WS ++
Sbjct: 48671 WINFKWVQNFTIKGYGTIDGQGSNWWSSSK 48582
Score = 32.7 bits (65), Expect(6) = 2e-025
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 574 YEGITMDNVSYPIIIDQKYCPNNIC 500
+ I + +V YP++IDQ YC IC
Sbjct: 46706 FSRIKVYDVMYPVMIDQYYCDKQIC 46632
Score = 31.3 bits (62), Expect(6) = 2e-025
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3 / -2
Query: 1309 LKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRL 1184
L AWK AC+ +G V +L + L+GPC + +++
Sbjct: 49033 LAAWKCACKVSGATIKVPEKLKFLIKPITLQGPCMPDLTLQV 48908
Score = 29.0 bits (57), Expect(6) = 2e-025
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 436 SNTPEAITLNCANNLPCQGVQLVNVDIK 353
S T + + L C+N++PC V L ++ ++
Sbjct: 46574 SYTLQPVHLACSNSIPCTDVDLTDIQLR 46491
>gb|AC144805.7| Medicago truncatula clone mth2-72a11, complete sequence
Length = 78128
Score = 64.8 bits (135), Expect(5) = 4e-025
Identities = 31/70 (44%), Positives = 43/70 (61%)
Frame = -3 / +3
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
+L +D +N+Q+ G LNS H++I +V I K+ + AP +SPNTDGI IG SS V
Sbjct: 55662 ALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYV 55841
Query: 829 TISSTTIGVG 800
I +TI G
Sbjct: 55842 LIQDSTIATG 55871
Score = 48.7 bits (100), Expect(5) = 4e-025
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDCI++ G+ I I GV CGPGHGI
Sbjct: 56862 IGDDCIAMNNGTSNINITGVTCGPGHGI 56945
Score = 39.1 bits (79), Expect(5) = 4e-025
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -3 / +3
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSY 614
SVGSLG + VE V V CT T NG+RIK++
Sbjct: 57039 SVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKTW 57146
Score = 37.7 bits (76), Expect(5) = 4e-025
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -3 / +2
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDI 356
S+V ++ V ++++ GTSN+ +I LNC N C + + V+I
Sbjct: 57704 SEVQISGVTYRDVIGTSNSKTSIKLNCNKNSGCTDIFMDVVNI 57832
Score = 33.1 bits (66), Expect(5) = 4e-025
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKN 1049
WI + + I+G G IDGQG+ W N
Sbjct: 54099 WIVFYYIHGIIIDGGGQIDGQGSTWWKTN 54185
>gb|AC172101.1| Medicago truncatula chromosome 7 BAC clone mth2-29f3, complete sequence
Length = 88313
Score = 65.7 bits (137), Expect(5) = 7e-025
Identities = 24/71 (33%), Positives = 42/71 (59%)
Frame = -3 / +1
Query: 1009 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 830
SL ++++R +T++NS+ H+ C V++ ++ V AP SPNTDGIHI + +
Sbjct: 63853 SLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIHISATKGI 64032
Query: 829 TISSTTIGVGD 797
IS + + G+
Sbjct: 64033 EISHSDVKTGE 64065
Score = 42.8 bits (87), Expect(5) = 7e-025
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3 / +2
Query: 802 GDDCISIGPGSKMIRIHGVKCGPGHGI 722
GDDCISI S + I CGPGHGI
Sbjct: 64238 GDDCISIVRNSSQVWIRNFSCGPGHGI 64318
Score = 41.4 bits (84), Expect(5) = 7e-025
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -3 / +2
Query: 484 SKVAVNDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNV 362
S V V ++ F NI GTS + E I C++ PC+G+ L N+
Sbjct: 65021 SAVQVVNISFINIIGTSASEETIKFACSDTYPCEGLHLENI 65143
Score = 40.5 bits (82), Expect(5) = 7e-025
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3 / +2
Query: 589 ASKFLYEGITMDNVSYPIIIDQKYCPNNICVKS 491
AS ++ I M+NVS PIIIDQ YC + + K+
Sbjct: 64613 ASNITFQDIVMENVSNPIIIDQYYCDSRLPCKN 64711
Score = 33.1 bits (66), Expect(5) = 7e-025
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3 / +1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVWSKN 1049
+R I I V +LS+ G G IDG G WS++
Sbjct: 63505 KRK*IYIHGVNHLSVGGGGRIDGMGQEWWSRS 63600
>gb|BI311148.1|BI311148 EST5312898 GESD Medicago truncatula cDNA clone pGESD10G3 5' end, mRNA
sequence
Length = 761
Score = 98.2 bits (208), Expect(2) = 2e-023
Identities = 39/105 (37%), Positives = 60/105 (57%)
Frame = -3 / +2
Query: 1027 CKILPNSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHI 848
C +P +L D +QI G+T +N H+ + + +++ I + + +P S NTDGI +
Sbjct: 446 CPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDL 625
Query: 847 GDSSNVTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVG 713
+ V I I GDDCI++ GS+ + + V CGPGHGISVG
Sbjct: 626 TRTIGVNIHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISVG 760
Score = 36.8 bits (74), Expect(2) = 2e-023
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3 / +2
Query: 1369 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGN 1244
L++ GAKGDG++D + + A+K C +V+P G+
Sbjct: 92 LNVIHYGAKGDGRTDDSKAFVDAFKALCGGRYGNTLVVPNGH 217
>gb|AC157892.2| Medicago truncatula chromosome 7 clone mte1-84h13, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 121593
Score = 57.0 bits (118), Expect(6) = 3e-021
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = -3 / -3
Query: 988 TNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNVTISSTTI 809
+N+ ++G+ + NS F+ C NV I+ + + AP SPNTDGIH+ +++V I ++ I
Sbjct: 35977 SNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKISPNTDGIHLEYANDVKIYNSVI 35798
Query: 808 GVG 800
G
Sbjct: 35797 SNG 35789
Score = 47.3 bits (97), Expect(6) = 3e-021
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3 / -2
Query: 805 VGDDCISIGPGSKMIRIHGVKCGPGHGI 722
+GDDC+SIG GS + I + CGP HGI
Sbjct: 35708 IGDDCVSIGTGSYDVDIKNITCGPSHGI 35625
Score = 35.9 bits (72), Expect(6) = 3e-021
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3 / -1
Query: 721 SVGSLGRYKDEKDVEDVQVTGCTIAGTTNGLRIKSYEDSKSSLKASKF 578
S+GSLG + + V ++ V I + NG+RIK+++ S+ F
Sbjct: 34938 SIGSLGNHNTKACVSNITVRDSIIKMSDNGIRIKTWQGGSGSVSGVTF 34795
Score = 35.0 bits (70), Expect(6) = 3e-021
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3 / -3
Query: 1366 DIAQLGAKGDGKSDSTPMILKAWKNACEATGVQKIVIPPGNY 1241
D+ GA GDG D T AW AC+ +++ P +
Sbjct: 36910 DVRSFGAIGDGIEDDTESFKMAWDTACQNGSDVNVILVPQGF 36785
Score = 32.7 bits (65), Expect(6) = 3e-021
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3 / -1
Query: 1144 QRNWIEIENVENLSINGHGTIDGQGALVW 1058
+R W+ ++ +S+ G G+IDG+G W
Sbjct: 36303 RRQWLVFYRMKGMSLEGSGSIDGRGQKWW 36217
Score = 28.6 bits (56), Expect(6) = 3e-021
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3 / -1
Query: 574 YEGITMDNVSYPIIIDQKYCPNNIC 500
+ I M +V PIIIDQ YC C
Sbjct: 34797 FNNIHMISVRNPIIIDQYYCLTKDC 34723
>gb|DW016712.1|DW016712 EST1225673 MTY Medicago truncatula cDNA clone MTYAK65, mRNA sequence
Length = 658
Score = 74.4 bits (156), Expect(3) = 3e-021
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = -3 / +3
Query: 1342 GDGKSDSTPMILKAWKNACEATGVQKIVIPPGNYLTGGLELKGPCKSSIIIRLDGNLLGT 1163
G SD T + AWK AC +T KIVIP G Y GG+ELKGPCK+ I +++DG +
Sbjct: 186 GAPNSDITLALGNAWKEACASTTASKIVIPGGTYKMGGIELKGPCKAPIEVQVDGTIQAP 365
Query: 1162 GDLS 1151
D S
Sbjct: 366 ADPS 377
Score = 34.1 bits (68), Expect(3) = 3e-021
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 1135 WIEIENVENLSINGHGTIDGQGALVWSKNQ 1046
W++ +E+L+++G G DGQGA + + Q
Sbjct: 399 WVKFLYMEHLTLSGKGVFDGQGATAYKQAQ 488
Score = 33.1 bits (66), Expect(3) = 3e-021
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 991 VTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTV 890
V N + G+T +SK FH+ + C N D TV
Sbjct: 555 VNNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTV 656
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 964,248,027
Number of Sequences: 392609
Number of extensions: 11458692
Number of successful extensions: 50886
Number of sequences better than 1.0e-020: 46
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 57493526193
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)