TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106166.2.1
(715 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula c... 210 3e-053
gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula... 208 7e-053
gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula ... 200 2e-050
gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula c... 193 3e-048
gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula ... 191 9e-048
gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula c... 138 2e-046
gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula c... 138 2e-046
gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula c... 138 2e-046
gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Med... 181 1e-044
gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula c... 181 1e-044
gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula c... 138 3e-041
gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula c... 167 2e-040
gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cD... 161 8e-039
gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infect... 160 2e-038
gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula c... 154 1e-036
gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula... 104 2e-036
gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago trunca... 153 4e-036
gb|DW017971.1|DW017971 EST1226932 MTY Medicago truncatula c... 152 5e-036
gb|AC144503.17| Medicago truncatula clone mth2-13f22, compl... 111 3e-032
gb|CG974499.1|CG974499 MBEKF26TRB mth2 Medicago truncatula ... 76 3e-032
gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula c... 138 9e-032
gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula c... 137 2e-031
emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2... 74 4e-031
gb|AC144807.23| Medicago truncatula clone mth2-9j13, comple... 66 5e-030
gb|AC152403.17| Medicago truncatula clone mth2-29f13, compl... 67 1e-028
gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower M... 127 1e-028
gb|BF004465.1|BF004465 EST432963 KV1 Medicago truncatula cD... 121 2e-026
gb|BE320543.2|BE320543 NF031G12RT1F1088 Developing root Med... 114 1e-024
gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula c... 113 3e-024
gb|AJ845297.1|AJ845297 AJ845297 MtSNF Medicago truncatula c... 112 5e-024
gb|AW328971.2|AW328971 N200163e rootphos(-) Medicago trunca... 111 2e-023
gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago tr... 111 2e-023
gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago trunca... 106 3e-022
gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago trunca... 105 1e-021
>gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula cDNA clone MTUS-44H2, mRNA
sequence
Length = 632
Score = 210 bits (452), Expect = 3e-053
Identities = 84/123 (68%), Positives = 106/123 (86%)
Frame = -2 / -1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
+QGW+ TGD+GYFDE GQLFVVDR+KELIK G+Q+APAELE LL+SHPEI DA VIP P
Sbjct: 533 DQGWMITGDLGYFDEKGQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSP 354
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
DA+ GEVP+A+VVR SS+T+ D+QKF+ KQVA YK+LRRVTF++ +PK A+GKILR++
Sbjct: 353 DAKVGEVPVAFVVRLPNSSITKEDIQKFVAKQVAPYKRLRRVTFLEKIPKLATGKILRKD 174
Query: 327 LIS 319
L+S
Sbjct: 173 LVS 165
>gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula cDNA clone MtBC57H09 T3, mRNA
sequence
Length = 535
Score = 208 bits (449), Expect = 7e-053
Identities = 83/122 (68%), Positives = 105/122 (86%)
Frame = -2 / +1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
+QGW TGD+GYFDE GQLFVVDR+KELIK G+Q+APAELE LL+SHPEI DA VIP P
Sbjct: 163 DQGWTLTGDLGYFDEKGQLFVVDRIKELIKCNGYQVAPAELEDLLISHPEISDAGVIPSP 342
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
DA+AGEVP+A+VVRS S +TE D++KF+ K+VA YK+LRRVTF++ +PKS +GKILR++
Sbjct: 343 DAKAGEVPVAFVVRSLNSLITEEDIKKFVAKEVAPYKRLRRVTFIEKIPKSPTGKILRKD 522
Query: 327 LI 322
L+
Sbjct: 523 LV 528
>gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula cDNA clone pGESD10E8 5' end,
mRNA sequence
Length = 693
Score = 200 bits (432), Expect = 2e-050
Identities = 79/128 (61%), Positives = 106/128 (82%)
Frame = -2 / +3
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 502
GWL TGDI YFD G ++VVDRLKELIKYKG+Q+APAELE LL SHPEI DA VIP+PD
Sbjct: 303 GWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDE 482
Query: 501 EAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELI 322
+AG++P+A+V+R SS+ E ++ F+ KQVA YKK+RRV FV+S+PK+A+GKILR++L+
Sbjct: 483 DAGQIPLAFVIRQPHSSMGEAEIINFVAKQVAPYKKVRRVVFVNSIPKNATGKILRKDLL 662
Query: 321 SKVRSSKL 298
+K+ ++L
Sbjct: 663 NKILLNEL 686
>gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula cDNA clone pGPOD-11L1 5' end,
mRNA sequence
Length = 644
Score = 193 bits (416), Expect = 3e-048
Identities = 72/125 (57%), Positives = 104/125 (83%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG D+ +LF+VDRLKELIKYKG+Q+APAELE LL++HP I DA V+P
Sbjct: 162 KEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLK 341
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRE 328
D AGEVP+A+VVRS+ S ++E +++++I +QV +YK++ RV F +++PK+ASGKILR+E
Sbjct: 342 DEAAGEVPVAFVVRSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKE 521
Query: 327 LISKV 313
L +++
Sbjct: 522 LTARL 536
>gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula cDNA clone pMHRP-47N9, mRNA
sequence
Length = 609
Score = 191 bits (412), Expect = 9e-048
Identities = 78/126 (61%), Positives = 99/126 (78%)
Frame = -2 / +1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GWL TGD+ Y D G LFVVDRLKELIKYKG+Q+ PAELE LLL+HP ILDA VIP+PD
Sbjct: 136 EGWLKTGDVCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPD 315
Query: 504 AEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRREL 325
EAG+VP+AYVVR+ S+L+ V F+ +QVA YK++R+V F+ S+PK+ SGKILR++L
Sbjct: 316 KEAGQVPMAYVVRNVGSNLSGSQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDL 495
Query: 324 ISKVRS 307
I S
Sbjct: 496 IKLATS 513
>gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula cDNA clone MTUS-1E11, mRNA
sequence
Length = 834
Score = 138 bits (296), Expect(2) = 2e-046
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = -2 / -2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 575 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPML 396
Query: 507 DAEAGEVPIAYVVRSSESSLTEVD 436
D AGEVP+A+VVRS+ S T D
Sbjct: 395 DEAAGEVPVAFVVRSNGSIDTTED 324
Score = 69.3 bits (145), Expect(2) = 2e-046
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -2 / -2
Query: 447 TEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
TE D++KF+ KQV +YK++ RV F+D++PKS SGKILR++L +K+
Sbjct: 332 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKL 198
>gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula cDNA clone MTUS-60G10, mRNA
sequence
Length = 782
Score = 138 bits (296), Expect(2) = 2e-046
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = -2 / -3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 513 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPML 334
Query: 507 DAEAGEVPIAYVVRSSESSLTEVD 436
D AGEVP+A+VVRS+ S T D
Sbjct: 333 DEAAGEVPVAFVVRSNGSIDTTED 262
Score = 69.3 bits (145), Expect(2) = 2e-046
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -2 / -3
Query: 447 TEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
TE D++KF+ KQV +YK++ RV F+D++PKS SGKILR++L +K+
Sbjct: 270 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKL 136
>gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula cDNA clone pDSIL-7H14, mRNA
sequence
Length = 618
Score = 138 bits (296), Expect(2) = 2e-046
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 86 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPML 265
Query: 507 DAEAGEVPIAYVVRSSESSLTEVD 436
D AGEVP+A+VVRS+ S T D
Sbjct: 266 DEAAGEVPVAFVVRSNGSIDTTED 337
Score = 69.3 bits (145), Expect(2) = 2e-046
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -2 / +2
Query: 447 TEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
TE D++KF+ KQV +YK++ RV F+D++PKS SGKILR++L +K+
Sbjct: 329 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKL 463
>gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Medicago truncatula cDNA clone
NF041C08ST 5', mRNA sequence
Length = 656
Score = 181 bits (389), Expect = 1e-044
Identities = 67/115 (58%), Positives = 95/115 (82%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG D+ +LF+VDRLKELIKYKG+Q+APAELE LL++HP I DA V+P
Sbjct: 312 KEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLK 491
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGK 343
D AGEVP+A+VVRS+ S ++E +++++I +QV +YK++ RV F +++PK+ASGK
Sbjct: 492 DEAAGEVPVAFVVRSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGK 656
>gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula cDNA clone pDSIL-6E3, mRNA
sequence
Length = 625
Score = 181 bits (389), Expect = 1e-044
Identities = 69/121 (57%), Positives = 96/121 (79%)
Frame = -2 / +2
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GWL TGD+ YFD G LF+VDRLKELIKYK +Q+ PAELE +L ++PEI DA V+P+PD
Sbjct: 230 EGWLKTGDLCYFDSDGYLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPD 409
Query: 504 AEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRREL 325
+AG++P+A+VVR S++T V ++ KQV YKK+RRV+F++S+PKS +GKIL +EL
Sbjct: 410 EDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILIKEL 589
Query: 324 I 322
+
Sbjct: 590 V 592
>gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula cDNA clone MTYBF07, mRNA
sequence
Length = 765
Score = 138 bits (296), Expect(2) = 3e-041
Identities = 54/84 (64%), Positives = 68/84 (80%)
Frame = -2 / +1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 427 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPML 606
Query: 507 DAEAGEVPIAYVVRSSESSLTEVD 436
D AGEVP+A+VVRS+ S T D
Sbjct: 607 DEAAGEVPVAFVVRSNGSIDTTED 678
Score = 51.5 bits (106), Expect(2) = 3e-041
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = -2 / +1
Query: 447 TEVDVQKFIEKQVAYYKKLRRVTFVDSVPKS 355
TE D++KF+ KQV +YK++ RV F+D++PKS
Sbjct: 670 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKS 762
>gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula cDNA clone MTUS-10B7, mRNA
sequence
Length = 648
Score = 167 bits (359), Expect = 2e-040
Identities = 63/115 (54%), Positives = 93/115 (80%)
Frame = -2 / -1
Query: 657 GYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIA 478
G D+ +LF+VDRLKELIKYKG+Q+AP ELE LL++HP I DA V+P D AGEVP+A
Sbjct: 648 GLIDDDDELFIVDRLKELIKYKGYQVAPVELEALLIAHPNISDAAVVPLKDEAAGEVPVA 469
Query: 477 YVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
+VVRS+ S ++E +++++I +QV +YK++ RV F +++PK+ASGKILR+EL +++
Sbjct: 468 FVVRSNGSKISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKELTARL 304
>gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cDNA clone pGVN-57J18 5' end,
mRNA sequence
Length = 567
Score = 161 bits (347), Expect = 8e-039
Identities = 60/102 (58%), Positives = 84/102 (82%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG D+ +LF+VDRLKELIKYKG+Q+APAELE LL++HP I DA V+P
Sbjct: 257 KEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLK 436
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRV 382
D AGEVP+A+VVRS+ S ++E +++++I +QV +YK++ RV
Sbjct: 437 DEAAGEVPVAFVVRSNGSKISEDEIKQYISQQVVFYKRINRV 562
>gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 160 bits (344), Expect = 2e-038
Identities = 62/106 (58%), Positives = 86/106 (81%)
Frame = -2 / +2
Query: 639 GQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSS 460
G LF+VDRLKELIKYK +Q+ PAELE +L ++PEI DA V+P+PD +AG++P+A+VVR
Sbjct: 17 GYLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKP 196
Query: 459 ESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELI 322
S++T V ++ KQV YKK+RRV+F++S+PKS +GKILRREL+
Sbjct: 197 GSNITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRRELV 334
>gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula cDNA clone pKVKC-9C6, mRNA
sequence
Length = 699
Score = 154 bits (331), Expect = 1e-036
Identities = 59/95 (62%), Positives = 77/95 (81%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
E+GWLHTGD+GY D+ ++F+VDR+KELIK+KGFQ+ PAELEGLL+SHP I DA V+P
Sbjct: 414 EEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQK 593
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAY 403
D AGEVP+A+VVRS+ + LTE ++FI KQV +
Sbjct: 594 DVAAGEVPVAFVVRSNGNDLTEEICKEFIAKQVVF 698
>gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula cDNA clone MtBA50D05 T7, mRNA
sequence
Length = 462
Score = 104 bits (222), Expect(2) = 2e-036
Identities = 43/65 (66%), Positives = 52/65 (80%)
Frame = -2 / +3
Query: 630 FVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESS 451
F+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P D AGEVP+A+VVRS+ S
Sbjct: 3 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 182
Query: 450 LTEVD 436
T D
Sbjct: 183 DTTED 197
Score = 69.3 bits (145), Expect(2) = 2e-036
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = -2 / +3
Query: 447 TEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
TE D++KF+ KQV +YK++ RV F+D++PKS SGKILR++L +K+
Sbjct: 189 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKL 323
>gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago truncatula cDNA clone MHRP-16B12,
mRNA sequence
Length = 595
Score = 153 bits (328), Expect = 4e-036
Identities = 63/96 (65%), Positives = 76/96 (79%)
Frame = -2 / +2
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GWL TGD+ Y D G LFVVDRLKELIKYKG+Q+ PAELE LLL+HP ILDA VIP+PD
Sbjct: 308 EGWLKTGDVCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPD 487
Query: 504 AEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYK 397
EAG+VP+AYVVR+ S+L+ V F+ +QVA YK
Sbjct: 488 KEAGQVPMAYVVRNVGSNLSGSQVMDFVAEQVAPYK 595
>gb|DW017971.1|DW017971 EST1226932 MTY Medicago truncatula cDNA clone MTYB060, mRNA
sequence
Length = 801
Score = 152 bits (327), Expect = 5e-036
Identities = 59/73 (80%), Positives = 69/73 (94%)
Frame = -2 / +1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPD 505
+GW+HTGD+GYFDE G+L+VVDR+KELIKYKG+Q+APAELE LL+SHPEI DAVV+PFPD
Sbjct: 574 EGWVHTGDLGYFDEIGRLYVVDRIKELIKYKGYQVAPAELEDLLVSHPEIQDAVVVPFPD 753
Query: 504 AEAGEVPIAYVVR 466
EAGEVPIAYVVR
Sbjct: 754 DEAGEVPIAYVVR 792
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
Length = 116810
Score = 111 bits (237), Expect(3) = 3e-032
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 31247 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVP 31420
Score = 52.8 bits (109), Expect(3) = 3e-032
Identities = 19/34 (55%), Positives = 29/34 (85%)
Frame = -2 / +2
Query: 414 QVAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
QV +YK++ RV F+D++PKS SGKILR++L +K+
Sbjct: 32147 QVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKL 32248
Score = 31.3 bits (62), Expect(3) = 3e-032
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / +2
Query: 507 DAEAGEVPIAYVVRSSESSLTEVD 436
D AGEVP+A+VVRS+ S T D
Sbjct: 31526 DEAAGEVPVAFVVRSNGSIDTTED 31597
>gb|CG974499.1|CG974499 MBEKF26TRB mth2 Medicago truncatula genomic clone 73E4, DNA
sequence
Length = 937
Score = 76.2 bits (160), Expect(3) = 3e-032
Identities = 26/35 (74%), Positives = 34/35 (97%)
Frame = -2 / -1
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
+GW+HTGD+GYFDE G+L+VVDR+KELIKYKG+Q+
Sbjct: 820 EGWVHTGDLGYFDEIGRLYVVDRIKELIKYKGYQV 716
Score = 57.0 bits (118), Expect(3) = 3e-032
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
FPD EAGEVPIAYVVR SSL+E +++KFI QV
Sbjct: 123 FPDDEAGEVPIAYVVRLPNSSLSEEEIKKFIANQV 19
Score = 48.3 bits (99), Expect(3) = 3e-032
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -2 / -3
Query: 585 QIAPAELEGLLLSHPEILDAVVIP 514
Q+APAELE LL+SHPEI DAVV+P
Sbjct: 401 QVAPAELEDLLVSHPEIQDAVVVP 330
>gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula cDNA clone pDSIR-30H13, mRNA
sequence
Length = 655
Score = 138 bits (296), Expect = 9e-032
Identities = 51/76 (67%), Positives = 65/76 (85%)
Frame = -2 / +1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
E+GWLHTGD+GY D+ ++F+VDR+KELIK+KGFQ+ PAELEGLL+SHP I DA V+P
Sbjct: 418 EEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQK 597
Query: 507 DAEAGEVPIAYVVRSS 460
D AGEVP+A+VVRS+
Sbjct: 598 DVAAGEVPVAFVVRSN 645
>gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula cDNA clone pDSLC-31I2, mRNA
sequence
Length = 453
Score = 137 bits (293), Expect = 2e-031
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG D+ +LF+VDRLKELIKYKG+Q+APAELE LL++HP I DA V+P
Sbjct: 210 KEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLK 389
Query: 507 DAEAGEVPIAYVVRSSESSLT 445
D AGEVP+A+VVRS+ S ++
Sbjct: 390 DEAAGEVPVAFVVRSNGSKIS 452
>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE
Length = 133229
Score = 74.4 bits (156), Expect(4) = 4e-031
Identities = 24/36 (66%), Positives = 33/36 (91%)
Frame = -2 / -2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
E+GWLHTGD+GY D+ ++F+VDR+KELIK+KGFQ+
Sbjct: 20245 EEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQV 20138
Score = 52.4 bits (108), Expect(4) = 4e-031
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = -2 / -2
Query: 417 KQVAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSS 304
+QV +YK+L +V FV ++PKS +GKILR++L +K+ SS
Sbjct: 19537 EQVVFYKRLHKVYFVHAIPKSPAGKILRKDLKAKLESS 19424
Score = 46.9 bits (96), Expect(4) = 4e-031
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
D AGEVP+A+VVRS+ + LTE V++FI KQV
Sbjct: 19887 DVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQV 19789
Score = 43.2 bits (88), Expect(4) = 4e-031
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 582 IAPAELEGLLLSHPEILDAVVIP 514
+ PAELEGLL+SHP I DA V+P
Sbjct: 20056 VPPAELEGLLVSHPSIADAAVVP 19988
>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
Length = 115904
Score = 66.1 bits (138), Expect(4) = 5e-030
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -2 / +1
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
GWL TGDI YFD G ++VVDRLKELIKYKG+Q+
Sbjct: 37369 GWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQV 37470
Score = 56.1 bits (116), Expect(4) = 5e-030
Identities = 21/33 (63%), Positives = 31/33 (93%)
Frame = -2 / +3
Query: 411 VAYYKKLRRVTFVDSVPKSASGKILRRELISKV 313
VA YKK+RRV FV+S+PK+A+GKILR++L++K+
Sbjct: 38382 VAPYKKVRRVVFVNSIPKNATGKILRKDLLNKI 38480
Score = 47.8 bits (98), Expect(4) = 5e-030
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = -2 / +2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAY 403
+PD +AG++P+A+V+R SS+ E ++ F+ KQV +
Sbjct: 38168 YPDEDAGQIPLAFVIRQPHSSMGEAEIINFVAKQVLF 38278
Score = 42.8 bits (87), Expect(4) = 5e-030
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 582 IAPAELEGLLLSHPEILDAVVIP 514
+APAELE LL SHPEI DA VIP
Sbjct: 37965 VAPAELEQLLQSHPEIKDAAVIP 38033
>gb|AC152403.17| Medicago truncatula clone mth2-29f13, complete sequence
Length = 120302
Score = 66.6 bits (139), Expect(4) = 1e-028
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -2 / -2
Query: 684 QGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQI 580
+GWL TGD+ Y D G LFVVDRLKELIKYKG+Q+
Sbjct: 59443 EGWLRTGDLCYIDSDGFLFVVDRLKELIKYKGYQV 59339
Score = 50.1 bits (103), Expect(4) = 1e-028
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -2 / -1
Query: 411 VAYYKKLRRVTFVDSVPKSASGKILRRELISKVRS 307
VA YK++R+V F+ S+PK+ SGKILRR+LI S
Sbjct: 57902 VAPYKRIRKVAFIPSIPKNPSGKILRRDLIKLATS 57798
Score = 46.4 bits (95), Expect(4) = 1e-028
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 606 LIKYKGFQIAPAELEGLLLSHPEILDAVVIP 514
LI + Q+ PAELE LLL+HP ILDA VIP
Sbjct: 58699 LIFFLMLQVPPAELEALLLTHPAILDAAVIP 58607
Score = 45.1 bits (92), Expect(4) = 1e-028
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -2 / -2
Query: 513 FPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQV 409
+PD EAG+ P+AYVVR S+++E V +F+ QV
Sbjct: 58321 YPDKEAGQYPMAYVVRKDGSNISESQVMEFVAGQV 58217
>gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF003D02FL 5', mRNA sequence
Length = 520
Score = 127 bits (273), Expect = 1e-028
Identities = 53/97 (54%), Positives = 70/97 (72%)
Frame = -2 / +1
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
+ GW+HTGDI YFD+ G L++ RLK++IKYKGFQIAPA+LE LL+SHPEI+DA V
Sbjct: 229 KDGWIHTGDIVYFDQDGYLYMSGRLKDIIKYKGFQIAPADLEALLISHPEIVDAAVTAGK 408
Query: 507 DAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYK 397
AGE+P+A+VV+ S L+ V ++ QVA YK
Sbjct: 409 VDVAGEIPVAFVVKKVGSVLSSQHVIDYVAXQVAPYK 519
>gb|BF004465.1|BF004465 EST432963 KV1 Medicago truncatula cDNA clone pKV1-17B2, mRNA
sequence
Length = 525
Score = 121 bits (258), Expect = 2e-026
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = -2 / +2
Query: 573 AELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKK 394
AELEGLL+S P I DA V+P D AGEVP A+VVRS+ + LTE V++FI KQV +YK+
Sbjct: 2 AELEGLLVSRPSIADAAVVPQKDVAAGEVPFAFVVRSNGNDLTEEIVKEFIAKQVVFYKR 181
Query: 393 LRRVTFVDSVPKSASGKILRRELISKVRSS 304
L +V FV ++PKS +GKILR++L +K+ SS
Sbjct: 182 LHKVYFVHAIPKSPAGKILRKDLKAKLESS 271
>gb|BE320543.2|BE320543 NF031G12RT1F1088 Developing root Medicago truncatula cDNA clone
NF031G12RT 5', mRNA sequence
Length = 577
Score = 114 bits (244), Expect = 1e-024
Identities = 48/117 (41%), Positives = 72/117 (61%)
Frame = -2 / +1
Query: 681 GWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 502
GW HTGDIGYFD G L +V R+KELI G +I+P E++ +LL H ++ AV PD
Sbjct: 31 GWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLGHQDVAQAVAFGVPDQ 210
Query: 501 EAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 331
+ GE ++ S++ +V K+ + + +K ++V DS+PK+A+GKILRR
Sbjct: 211 KYGEEIHCAIIPREGSNIDAEEVLKYCKTNLTSFKVPKKVFITDSLPKTATGKILRR 381
>gb|CA917753.1|CA917753 EST641900 GPOD Medicago truncatula cDNA clone GPOD-37M9, mRNA
sequence
Length = 628
Score = 113 bits (242), Expect = 3e-024
Identities = 42/64 (65%), Positives = 53/64 (82%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D V+P
Sbjct: 437 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPML 616
Query: 507 DAEA 496
D A
Sbjct: 617 DEAA 628
>gb|AJ845297.1|AJ845297 AJ845297 MtSNF Medicago truncatula cDNA clone MtNF01J08N1, mRNA
sequence
Length = 477
Score = 112 bits (240), Expect = 5e-024
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = -2 / -3
Query: 591 GFQIAPAELEGLLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQ 412
GF AP +LEG + HPE L+A V+PFP A+ GEVP+AY V S SLTE ++ KF Q
Sbjct: 475 GFPGAPPKLEGFFVFHPEKLEAGVLPFPKAQTGEVPVAYSVGSPHRSLTEENIPKFFFDQ 296
Query: 411 VAYYKKLRRVTFVDSVPKSASGKILRRELISKVRSSK 301
A +KKL R F + VPK+ASGKI ++++ K RS K
Sbjct: 295 GAPFKKLGRGAFFNPVPKTASGKIFKKKVFCKARSQK 185
>gb|AW328971.2|AW328971 N200163e rootphos(-) Medicago truncatula cDNA clone MHRP-14G7, mRNA
sequence
Length = 444
Score = 111 bits (236), Expect = 2e-023
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = -2 / +3
Query: 549 SHPEILDAVVIPFPDAEAGEVPIAYVVRSSESSLTEVDVQKFIEKQVAYYKKLRRVTFVD 370
SHP I DA V+P D AGEVP+A+VVRS+ + LTE V++FI KQV +YK+L +V FV
Sbjct: 9 SHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQVVFYKRLHKVYFVH 188
Query: 369 SVPKSASGKILRRELISKVRSS 304
++PKS +GKILR++L +K+ SS
Sbjct: 189 AIPKSPAGKILRKDLKAKLESS 254
>gb|BF634495.1|BF634495 NF062B09DT1F1076 Drought Medicago truncatula cDNA clone NF062B09DT
5', mRNA sequence
Length = 623
Score = 111 bits (236), Expect = 2e-023
Identities = 42/65 (64%), Positives = 52/65 (80%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 508
++GWLHTGDIG D+ +LF+VDRLKELIKYKG+ +APAELE LL++HP I DA V+P
Sbjct: 429 KEGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYXVAPAELEALLIAHPNISDASVVPLK 608
Query: 507 DAEAG 493
D AG
Sbjct: 609 DEAAG 623
>gb|AW329105.2|AW329105 N200312e rootphos(-) Medicago truncatula cDNA clone MHRP-16C12,
mRNA sequence
Length = 457
Score = 106 bits (227), Expect = 3e-022
Identities = 38/54 (70%), Positives = 48/54 (88%)
Frame = -2 / +2
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDA 526
E+GWLHTGD+GY D+ ++F+VDR+KELIK+KGFQ+ PAELEGLL+SHP I DA
Sbjct: 293 EEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADA 454
>gb|AW329421.2|AW329421 N200656e rootphos(-) Medicago truncatula cDNA clone MHRP-19H8, mRNA
sequence
Length = 590
Score = 105 bits (223), Expect = 1e-021
Identities = 38/53 (71%), Positives = 48/53 (90%)
Frame = -2 / +3
Query: 687 EQGWLHTGDIGYFDEGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILD 529
++GWLHTGDIG+ D+ +LF+VDRLKELIKYKGFQ+APAELE ++LSHP+I D
Sbjct: 426 KEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISD 584
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 730,441,041
Number of Sequences: 392609
Number of extensions: 9959334
Number of successful extensions: 84645
Number of sequences better than 1.0e-020: 36
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 23065950435
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)