TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071761.2.1
(638 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula c... 187 1e-046
gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula c... 185 5e-046
gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula c... 107 8e-045
gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula c... 107 8e-045
gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula c... 107 8e-045
gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula... 107 8e-045
gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Med... 169 5e-041
gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula ... 159 4e-038
gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula... 155 6e-037
gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula ... 151 8e-036
gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infect... 150 2e-035
gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cD... 148 7e-035
gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula c... 148 1e-034
gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula c... 107 2e-034
gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula c... 143 2e-033
gb|BF004465.1|BF004465 EST432963 KV1 Medicago truncatula cD... 135 5e-031
gb|AC144503.17| Medicago truncatula clone mth2-13f22, compl... 75 2e-029
gb|AW328971.2|AW328971 N200163e rootphos(-) Medicago trunca... 128 9e-029
gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula c... 126 3e-028
gb|AW287981.2|AW287981 N100825e rootphos(-) Medicago trunca... 94 1e-026
emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2... 65 5e-026
gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago trunca... 116 3e-025
gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula c... 111 1e-023
gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower M... 104 1e-021
gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula c... 103 2e-021
>gb|BI309413.1|BI309413 EST530823 GPOD Medicago truncatula cDNA clone pGPOD-11L1 5' end,
mRNA sequence
Length = 644
Score = 187 bits (403), Expect = 1e-046
Identities = 75/110 (68%), Positives = 97/110 (88%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKG+QV PAELEALLI HP I DAAVV + D+ AGE+PVAF+VR+ GS+
Sbjct: 219 FIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSK 398
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQ+++++VVFYK+I++V+FTE+IPK SGKILRK+L ARL G+
Sbjct: 399 ISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKELTARLNEGL 548
Score = 123 bits (264), Expect = 2e-027
Identities = 63/109 (57%), Positives = 74/109 (67%)
Frame = -3 / -2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P+ SLA+ SF RI P+ LG+ SVK TL+I L* TT CLISSS+ EP T KAT
Sbjct: 544 PSLSLAVNSFRRIFPEAALGIVSVK*TLFILL*NTTCCDMYCLISSSLIFEPFDLTTKAT 365
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF TTAAS + G + +ASSSAG TW PLYL+ S + STMK
Sbjct: 364 GTSPAASSFNGTTAASEMFG*AINNASSSAGATWYPLYLINSFNRSTMK 218
>gb|CA919190.1|CA919190 EST636908 MTUS Medicago truncatula cDNA clone MTUS-10B7, mRNA
sequence
Length = 648
Score = 185 bits (399), Expect = 5e-046
Identities = 74/110 (67%), Positives = 96/110 (87%)
Frame = +2 / -1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKG+QV P ELEALLI HP I DAAVV + D+ AGE+PVAF+VR+ GS+
Sbjct: 621 FIVDRLKELIKYKGYQVAPVELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSK 442
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
++EDEIKQ+++++VVFYK+I++V+FTE+IPK SGKILRK+L ARL G+
Sbjct: 441 ISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGKILRKELTARLNEGL 292
Score = 122 bits (260), Expect = 7e-027
Identities = 62/109 (56%), Positives = 73/109 (66%)
Frame = -3 / +2
Query: 327 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKAT 148
P+ SLA+ SF RI P+ LG+ SVK TL+I L* TT CLISSS+ EP T KAT
Sbjct: 296 PSLSLAVNSFRRIFPEAALGIVSVK*TLFILL*NTTCCDMYCLISSSLIFEPFDLTTKAT 475
Query: 147 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
G SPA SSF TTAAS + G + +ASSS G TW PLYL+ S + STMK
Sbjct: 476 GTSPAASSFNGTTAASEMFG*AINNASSSTGATWYPLYLINSFNRSTMK 622
>gb|CA918666.1|CA918666 EST636384 MTUS Medicago truncatula cDNA clone MTUS-1E11, mRNA
sequence
Length = 834
Score = 107 bits (229), Expect(2) = 8e-045
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV M D+ AGE+PVAF+VR+ GS
Sbjct: 518 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 339
Query: 182 VTEDE 196
T ++
Sbjct: 338 DTTED 324
Score = 94.1 bits (199), Expect(2) = 8e-045
Identities = 37/49 (75%), Positives = 48/49 (97%)
Frame = +2 / -2
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
TED+IK+FV+K+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 332 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 186
Score = 74.4 bits (156), Expect(2) = 5e-028
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -3 / +1
Query: 330 TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSV 184
TPAASLAL+SFL ILP+G LGM S+K TL+I L* TT L TN L+SSSV
Sbjct: 187 TPAASLALRSFLNILPEGDLGMASMKNTLFILL*NTTCLETNFLMSSSV 333
Score = 71.2 bits (149), Expect(2) = 5e-028
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -3 / +1
Query: 195 SSSVT*EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLS 16
SS V+ P T ATG SPA SS I TTA S I GC ASSSAG T KPLYL+ SLS
Sbjct: 325 SSVVSILPFDLTTNATGTSPAASSNIGTTATSEI*GCERIMASSSAGAT*KPLYLINSLS 504
Query: 15 LSTM 4
LSTM
Sbjct: 505 LSTM 516
>gb|CA922957.1|CA922957 EST640675 MTUS Medicago truncatula cDNA clone MTUS-60G10, mRNA
sequence
Length = 782
Score = 107 bits (229), Expect(2) = 8e-045
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +2 / -3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV M D+ AGE+PVAF+VR+ GS
Sbjct: 456 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 277
Query: 182 VTEDE 196
T ++
Sbjct: 276 DTTED 262
Score = 94.1 bits (199), Expect(2) = 8e-045
Identities = 37/49 (75%), Positives = 48/49 (97%)
Frame = +2 / -3
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
TED+IK+FV+K+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 270 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 124
Score = 74.4 bits (156), Expect(2) = 5e-028
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -3 / +2
Query: 330 TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSV 184
TPAASLAL+SFL ILP+G LGM S+K TL+I L* TT L TN L+SSSV
Sbjct: 125 TPAASLALRSFLNILPEGDLGMASMKNTLFILL*NTTCLETNFLMSSSV 271
Score = 71.2 bits (149), Expect(2) = 5e-028
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -3 / +2
Query: 195 SSSVT*EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLS 16
SS V+ P T ATG SPA SS I TTA S I GC ASSSAG T KPLYL+ SLS
Sbjct: 263 SSVVSILPFDLTTNATGTSPAASSNIGTTATSEI*GCERIMASSSAGAT*KPLYLINSLS 442
Query: 15 LSTM 4
LSTM
Sbjct: 443 LSTM 454
>gb|AW776415.1|AW776415 EST335480 DSIL Medicago truncatula cDNA clone pDSIL-7H14, mRNA
sequence
Length = 618
Score = 107 bits (229), Expect(2) = 8e-045
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV M D+ AGE+PVAF+VR+ GS
Sbjct: 143 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 322
Query: 182 VTEDE 196
T ++
Sbjct: 323 DTTED 337
Score = 94.1 bits (199), Expect(2) = 8e-045
Identities = 37/49 (75%), Positives = 48/49 (97%)
Frame = +2 / +2
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
TED+IK+FV+K+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 329 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 475
Score = 74.4 bits (156), Expect(2) = 5e-028
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -3 / -1
Query: 330 TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSV 184
TPAASLAL+SFL ILP+G LGM S+K TL+I L* TT L TN L+SSSV
Sbjct: 474 TPAASLALRSFLNILPEGDLGMASMKNTLFILL*NTTCLETNFLMSSSV 328
Score = 71.2 bits (149), Expect(2) = 5e-028
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -3 / -1
Query: 195 SSSVT*EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLS 16
SS V+ P T ATG SPA SS I TTA S I GC ASSSAG T KPLYL+ SLS
Sbjct: 336 SSVVSILPFDLTTNATGTSPAASSNIGTTATSEI*GCERIMASSSAGAT*KPLYLINSLS 157
Query: 15 LSTM 4
LSTM
Sbjct: 156 LSTM 145
>gb|AL372362.1|AL372362 MtBA50D05R1 MtBA Medicago truncatula cDNA clone MtBA50D05 T7, mRNA
sequence
Length = 462
Score = 107 bits (229), Expect(2) = 8e-045
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV M D+ AGE+PVAF+VR+ GS
Sbjct: 3 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 182
Query: 182 VTEDE 196
T ++
Sbjct: 183 DTTED 197
Score = 94.1 bits (199), Expect(2) = 8e-045
Identities = 37/49 (75%), Positives = 48/49 (97%)
Frame = +2 / +3
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
TED+IK+FV+K+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 189 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 335
Score = 74.4 bits (156), Expect(2) = 5e-028
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = -3 / -3
Query: 330 TPAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSV 184
TPAASLAL+SFL ILP+G LGM S+K TL+I L* TT L TN L+SSSV
Sbjct: 334 TPAASLALRSFLNILPEGDLGMASMKNTLFILL*NTTCLETNFLMSSSV 188
Score = 71.2 bits (149), Expect(2) = 5e-028
Identities = 40/64 (62%), Positives = 42/64 (65%)
Frame = -3 / -3
Query: 195 SSSVT*EPSVRTMKATGISPARSSFIDTTAASLISGCVMRSASSSAGGTWKPLYLMISLS 16
SS V+ P T ATG SPA SS I TTA S I GC ASSSAG T KPLYL+ SLS
Sbjct: 196 SSVVSILPFDLTTNATGTSPAASSNIGTTATSEI*GCERIMASSSAGAT*KPLYLINSLS 17
Query: 15 LSTM 4
LSTM
Sbjct: 16 LSTM 5
>gb|AW691106.1|AW691106 NF041C08ST1F1000 Developing stem Medicago truncatula cDNA clone
NF041C08ST 5', mRNA sequence
Length = 656
Score = 169 bits (363), Expect = 5e-041
Identities = 66/96 (68%), Positives = 86/96 (89%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKG+QV PAELEALLI HP I DAAVV + D+ AGE+PVAF+VR+ GS+
Sbjct: 369 FIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSK 548
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGK 289
++EDEIKQ+++++VVFYK+I++V+FTE+IPK SGK
Sbjct: 549 ISEDEIKQYISQQVVFYKRINRVYFTETIPKAASGK 656
Score = 106 bits (227), Expect = 3e-022
Identities = 55/95 (57%), Positives = 64/95 (67%)
Frame = -3 / -2
Query: 285 PDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVT*EPSVRTMKATGISPARSSFIDTTA 106
P+ LG+ SVK TL+I L* TT CLISSS+ EP T KATG SPA SSF TTA
Sbjct: 652 PEAALGIVSVK*TLFILL*NTTCCDMYCLISSSLIFEPFDLTTKATGTSPAASSFNGTTA 473
Query: 105 ASLISGCVMRSASSSAGGTWKPLYLMISLSLSTMK 1
AS + G + +ASSSAG TW PLYL+ S + STMK
Sbjct: 472 ASEMFG*AINNASSSAGATWYPLYLINSFNRSTMK 368
>gb|BG588349.1|BG588349 EST490158 MHRP- Medicago truncatula cDNA clone pMHRP-47N9, mRNA
sequence
Length = 609
Score = 159 bits (342), Expect = 4e-038
Identities = 65/102 (63%), Positives = 82/102 (80%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QVPPAELEALL+THP I DAAV+ D AG++P+A++VR GS
Sbjct: 190 FVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVRNVGSN 369
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
++ ++ FVA++V YK+I KV F SIPKNPSGKILRKDL
Sbjct: 370 LSGSQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDL 495
>gb|AL389862.1|AL389862 MtBC57H09F1 MtBC Medicago truncatula cDNA clone MtBC57H09 T3, mRNA
sequence
Length = 535
Score = 155 bits (333), Expect = 6e-037
Identities = 64/102 (62%), Positives = 82/102 (80%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDR+KE+IK G+QV PAELE LLI+HPEI DA V+ D AGE+PVAF+VR+ S
Sbjct: 220 FVVDRIKELIKCNGYQVAPAELEDLLISHPEISDAGVIPSPDAKAGEVPVAFVVRSLNSL 399
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+TE++IK+FVAKEV YK++ +V F E IPK+P+GKILRKDL
Sbjct: 400 ITEEDIKKFVAKEVAPYKRLRRVTFIEKIPKSPTGKILRKDL 525
>gb|BI311229.1|BI311229 EST5312979 GESD Medicago truncatula cDNA clone pGESD10E8 5' end,
mRNA sequence
Length = 693
Score = 151 bits (325), Expect = 8e-036
Identities = 64/102 (62%), Positives = 80/102 (78%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
++VDRLKE+IKYKG+QV PAELE LL +HPEIKDAAV+ D+ AG+IP+AF++R S
Sbjct: 354 YVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQIPLAFVIRQPHSS 533
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+ E EI FVAK+V YKK+ +V F SIPKN +GKILRKDL
Sbjct: 534 MGEAEIINFVAKQVAPYKKVRRVVFVNSIPKNATGKILRKDL 659
>gb|CX523046.1|CX523046 s13dNF88A11VI085_471896 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 150 bits (322), Expect = 2e-035
Identities = 63/102 (61%), Positives = 81/102 (79%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYK +QVPPAELE +L T+PEI DAAVV D+ AG+IP+AF+VR GS
Sbjct: 26 FIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSN 205
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+T ++ +VAK+V YKKI +V F SIPK+P+GKILR++L
Sbjct: 206 ITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILRREL 331
>gb|BG580544.1|BG580544 EST482271 GVN Medicago truncatula cDNA clone pGVN-57J18 5' end,
mRNA sequence
Length = 567
Score = 148 bits (318), Expect = 7e-035
Identities = 57/84 (67%), Positives = 76/84 (90%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKG+QV PAELEALLI HP I DAAVV + D+ AGE+PVAF+VR+ GS+
Sbjct: 314 FIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSK 493
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVF 253
++EDEIKQ+++++VVFYK+I++V+
Sbjct: 494 ISEDEIKQYISQQVVFYKRINRVY 565
>gb|AW776080.1|AW776080 EST335145 DSIL Medicago truncatula cDNA clone pDSIL-6E3, mRNA
sequence
Length = 625
Score = 148 bits (317), Expect = 1e-034
Identities = 63/102 (61%), Positives = 80/102 (78%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYK +QVPPAELE +L T+PEI DAAVV D+ AG+IP+AF+VR GS
Sbjct: 284 FIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSN 463
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+T ++ +VAK+V YKKI +V F SIPK+P+GKIL K+L
Sbjct: 464 ITAAQVMDYVAKQVTPYKKIRRVSFINSIPKSPAGKILIKEL 589
>gb|DW019115.1|DW019115 EST1228076 MTY Medicago truncatula cDNA clone MTYBF07, mRNA
sequence
Length = 765
Score = 107 bits (229), Expect(2) = 2e-034
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV M D+ AGE+PVAF+VR+ GS
Sbjct: 484 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSI 663
Query: 182 VTEDE 196
T ++
Sbjct: 664 DTTED 678
Score = 59.3 bits (123), Expect(2) = 2e-034
Identities = 21/32 (65%), Positives = 31/32 (96%)
Frame = +2 / +1
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNP 280
TED+IK+FV+K+VVFYK+I++VFF ++IPK+P
Sbjct: 670 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSP 765
>gb|CA921826.1|CA921826 EST639544 MTUS Medicago truncatula cDNA clone MTUS-44H2, mRNA
sequence
Length = 632
Score = 143 bits (307), Expect = 2e-033
Identities = 58/102 (56%), Positives = 78/102 (76%)
Frame = +2 / -1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDR+KE+IK G+QV PAELE LL++HPEI DA V+ D GE+PVAF+VR S
Sbjct: 476 FVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDAKVGEVPVAFVVRLPNSS 297
Query: 182 VTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 307
+T+++I++FVAK+V YK++ +V F E IPK +GKILRKDL
Sbjct: 296 ITKEDIQKFVAKQVAPYKRLRRVTFLEKIPKLATGKILRKDL 171
>gb|BF004465.1|BF004465 EST432963 KV1 Medicago truncatula cDNA clone pKV1-17B2, mRNA
sequence
Length = 525
Score = 135 bits (290), Expect = 5e-031
Identities = 52/87 (59%), Positives = 72/87 (82%)
Frame = +2 / +2
Query: 59 AELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKK 238
AELE LL++ P I DAAVV D AGE+P AF+VR+ G+ +TE+ +K+F+AK+VVFYK+
Sbjct: 2 AELEGLLVSRPSIADAAVVPQKDVAAGEVPFAFVVRSNGNDLTEEIVKEFIAKQVVFYKR 181
Query: 239 IHKVFFTESIPKNPSGKILRKDLRARL 319
+HKV+F +IPK+P+GKILRKDL+A+L
Sbjct: 182 LHKVYFVHAIPKSPAGKILRKDLKAKL 262
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
Length = 116810
Score = 74.8 bits (157), Expect(3) = 2e-029
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 115
FIVDRLKE+IKYKGFQV PAELEA++++HP+I D AVV
Sbjct: 31304 FIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVV 31417
Score = 73.9 bits (155), Expect(3) = 2e-029
Identities = 29/38 (76%), Positives = 37/38 (97%)
Frame = +2 / +2
Query: 218 EVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 32147 QVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 32260
Score = 36.8 bits (74), Expect(3) = 2e-029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2 / +2
Query: 110 VVSMNDDLAGEIPVAFIVRTEGSQVTEDE 196
+ M D+ AGE+PVAF+VR+ GS T ++
Sbjct: 31511 IYRMLDEAAGEVPVAFVVRSNGSIDTTED 31597
>gb|AW328971.2|AW328971 N200163e rootphos(-) Medicago truncatula cDNA clone MHRP-14G7, mRNA
sequence
Length = 444
Score = 128 bits (274), Expect = 9e-029
Identities = 48/79 (60%), Positives = 67/79 (84%)
Frame = +2 / +3
Query: 83 THPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTE 262
+HP I DAAVV D AGE+PVAF+VR+ G+ +TE+ +K+F+AK+VVFYK++HKV+F
Sbjct: 9 SHPSIADAAVVPQKDVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQVVFYKRLHKVYFVH 188
Query: 263 SIPKNPSGKILRKDLRARL 319
+IPK+P+GKILRKDL+A+L
Sbjct: 189 AIPKSPAGKILRKDLKAKL 245
>gb|BQ165449.1|BQ165449 EST611318 KVKC Medicago truncatula cDNA clone pKVKC-9C6, mRNA
sequence
Length = 699
Score = 126 bits (270), Expect = 3e-028
Identities = 50/76 (65%), Positives = 64/76 (84%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDR+KE+IK+KGFQVPPAELE LL++HP I DAAVV D AGE+PVAF+VR+ G+
Sbjct: 471 FIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGND 650
Query: 182 VTEDEIKQFVAKEVVF 229
+TE+ K+F+AK+VVF
Sbjct: 651 LTEEICKEFIAKQVVF 698
>gb|AW287981.2|AW287981 N100825e rootphos(-) Medicago truncatula cDNA clone MHRP-11G10,
mRNA sequence
Length = 462
Score = 94.1 bits (199), Expect(2) = 1e-026
Identities = 37/49 (75%), Positives = 48/49 (97%)
Frame = +2 / +3
Query: 185 TEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 331
TED+IK+FV+K+VVFYK+I++VFF ++IPK+PSGKILRKDLRA+LAAGV
Sbjct: 99 TEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGV 245
Score = 46.9 bits (96), Expect(2) = 1e-026
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 92 EIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDE 196
+I D AVV M D+ AGE+PVAF+VR+ GS T ++
Sbjct: 3 QISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTED 107
>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE
Length = 133229
Score = 65.2 bits (136), Expect(4) = 5e-026
Identities = 23/35 (65%), Positives = 33/35 (94%)
Frame = +2 / -2
Query: 215 KEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARL 319
++VVFYK++HKV+F +IPK+P+GKILRKDL+A+L
Sbjct: 19537 EQVVFYKRLHKVYFVHAIPKSPAGKILRKDLKAKL 19433
Score = 52.4 bits (108), Expect(4) = 5e-026
Identities = 18/34 (52%), Positives = 29/34 (85%)
Frame = +2 / -3
Query: 125 DDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVV 226
D AGE+PVAF+VR+ G+ +TE+ +K+F+AK+V+
Sbjct: 19887 DVAAGEVPVAFVVRSNGNDLTEEIVKEFIAKQVI 19786
Score = 43.2 bits (88), Expect(4) = 5e-026
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2 / -2
Query: 50 VPPAELEALLITHPEIKDAAVV 115
VPPAELE LL++HP I DAAVV
Sbjct: 20056 VPPAELEGLLVSHPSIADAAVV 19991
Score = 37.7 bits (76), Expect(4) = 5e-026
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +2 / -2
Query: 2 FIVDRLKEIIKYKGFQV 52
FIVDR+KE+IK+KGFQV
Sbjct: 20188 FIVDRVKELIKFKGFQV 20138
>gb|AW329094.2|AW329094 N200300e rootphos(-) Medicago truncatula cDNA clone MHRP-16B12,
mRNA sequence
Length = 595
Score = 116 bits (248), Expect = 3e-025
Identities = 46/78 (58%), Positives = 62/78 (79%)
Frame = +2 / +2
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
F+VDRLKE+IKYKG+QVPPAELEALL+THP I DAAV+ D AG++P+A++VR GS
Sbjct: 362 FVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVRNVGSN 541
Query: 182 VTEDEIKQFVAKEVVFYK 235
++ ++ FVA++V YK
Sbjct: 542 LSGSQVMDFVAEQVAPYK 595
>gb|BF005122.1|BF005122 EST433620 DSLC Medicago truncatula cDNA clone pDSLC-31I2, mRNA
sequence
Length = 453
Score = 111 bits (236), Expect = 1e-023
Identities = 44/62 (70%), Positives = 54/62 (87%)
Frame = +2 / +3
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
FIVDRLKE+IKYKG+QV PAELEALLI HP I DAAVV + D+ AGE+PVAF+VR+ GS+
Sbjct: 267 FIVDRLKELIKYKGYQVAPAELEALLIAHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSK 446
Query: 182 VT 187
++
Sbjct: 447 IS 452
>gb|BI269977.1|BI269977 NF003D02FL1F1026 Developing flower Medicago truncatula cDNA clone
NF003D02FL 5', mRNA sequence
Length = 520
Score = 104 bits (222), Expect = 1e-021
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQ 181
++ RLK+IIKYKGFQ+ PA+LEALLI+HPEI DAAV + D+AGEIPVAF+V+ GS
Sbjct: 286 YMSGRLKDIIKYKGFQIAPADLEALLISHPEIVDAAVTAGKVDVAGEIPVAFVVKKVGSV 465
Query: 182 VTEDEIKQFVAKEVVFYK 235
++ + +VA +V YK
Sbjct: 466 LSSQHVIDYVAXQVAPYK 519
>gb|AW560940.1|AW560940 EST315988 DSIR Medicago truncatula cDNA clone pDSIR-30H13, mRNA
sequence
Length = 655
Score = 103 bits (220), Expect = 2e-021
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +2 / +1
Query: 2 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGS 178
FIVDR+KE+IK+KGFQVPPAELE LL++HP I DAAVV D AGE+PVAF+VR+ G+
Sbjct: 475 FIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGN 651
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 529,725,067
Number of Sequences: 392609
Number of extensions: 6944986
Number of successful extensions: 112445
Number of sequences better than 1.0e-020: 26
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19914864310
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)