TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3070863.2.1
         (992 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|DW015953.1|DW015953  EST1224914 MTY Medicago truncatula c...   241   2e-062

>gb|DW015953.1|DW015953 EST1224914 MTY Medicago truncatula cDNA clone MTYAB58, mRNA
           sequence
          Length = 600

 Score =  241 bits (520), Expect = 2e-062
 Identities = 104/158 (65%), Positives = 125/158 (79%)
 Frame = +1 / +3

                                                                       
Query: 70  RRLEGKVAIVTASTMGIGLAIAERLGLEGAAVVISSRKQKNVNEAVEGLRAKGITAVGAV 249
           +R +GKVAIVTAST GIG  IAERLGLEGA+VVISSR+QKNV+ A E LRAKGI     V
Sbjct: 126 KRFKGKVAIVTASTQGIGFTIAERLGLEGASVVISSRRQKNVDVAAEKLRAKGIDVFAVV 305

                                                                       
Query: 250 CHVSDAQQRKSLIETAVKSFGHIDILVSNAAANPSVDSILEMKESVLDKLWDINVKASIL 429
           CHVS+A QRK LI+  V+ +G ID++VSNAAANPSVDSIL+ ++SVLDKLW+INVKA+IL
Sbjct: 306 CHVSNALQRKDLIDKTVQKYGKIDVVVSNAAANPSVDSILQTQDSVLDKLWEINVKATIL 485

                                                 
Query: 430 LIQDAAPHLRKGXXXXXXXXXAGYNPEQGLTMYGVTKT 543
           L++DAAP+L KG         AGY+P   + MYGVTKT
Sbjct: 486 LLKDAAPYLPKGSSVVIISSIAGYHPPASMAMYGVTKT 599




 Score =  145 bits (312), Expect(2) = 2e-034
 Identities = 69/127 (54%), Positives = 83/127 (65%)
 Frame = -1 / -3

                                                                       
Query: 542 VFVTPYIVNPCSGL*PAIEEIIITDDPFXXXXXXXXXXXIEALTLISHSLSRTDSFISSM 363
           V VTPYI     G *PAI+E+I T++PF           I ALT ISH+LSRT+S++  M
Sbjct: 598 VLVTPYIAILAGG**PAIDEMITTEEPFGKYGAASFRRSIVALTFISHNLSRTESWVCRM 419

                                                                       
Query: 362 LSTEGFAAALETRISMCPKLLTAVSMRLLRCCASETWQTAPTAVIPLALSPSTASFTFFC 183
            STEGFAAAL+T  S+ P   T +S++   C A ETWQT     IPLALS S A+ TFFC
Sbjct: 418 ESTEGFAAALDTTTSIFPYFWTVLSIKSFLCRAFETWQTTANTSIPLALSFSAATSTFFC 239

                  
Query: 182 LREEMTT 162
           LREEMTT
Sbjct: 238 LREEMTT 218




 Score = 22.1 bits (42), Expect(2) = 2e-034
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1 / -3

                     
Query: 110 VDAVTMATFP 81
           V+AVT+ATFP
Sbjct: 166 VEAVTIATFP 137



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 755,629,386
Number of Sequences: 392609
Number of extensions: 9600640
Number of successful extensions: 51781
Number of sequences better than 1.0e-020: 1
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 34553979900
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)