TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3064721.2.2
(595 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 235 6e-061
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 185 5e-053
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 185 6e-053
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 188 1e-051
gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell cultu... 193 3e-048
gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula ... 190 2e-047
gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower M... 177 1e-043
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 177 1e-043
gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula c... 175 5e-043
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 150 2e-039
gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cD... 105 6e-039
gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula g... 105 6e-039
gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula... 158 8e-038
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 152 5e-036
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 143 1e-035
gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula c... 150 1e-035
gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-... 100 3e-035
gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Med... 147 1e-034
gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula c... 147 1e-034
gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula c... 147 1e-034
gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula c... 147 1e-034
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 138 3e-034
emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17... 145 4e-034
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 132 8e-033
gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula c... 133 1e-031
gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula c... 121 3e-031
gb|CF068061.1|CF068061 EST668782 MTUS Medicago truncatula c... 118 6e-026
gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower M... 118 8e-026
gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Med... 117 1e-025
gb|CG956619.1|CG956619 MBEFU73TF mth2 Medicago truncatula g... 110 4e-025
gb|AC148653.1| Medicago truncatula chromosome unknown clone... 110 1e-024
gb|CG938710.1|CG938710 MBEEA61TRC mth2 Medicago truncatula ... 110 3e-023
gb|CG946208.1|CG946208 MBEEA63TRC mth2 Medicago truncatula ... 110 3e-023
gb|CG965021.1|CG965021 MBEGJ85TR mth2 Medicago truncatula g... 110 3e-023
gb|BE205173.1|BE205173 EST397849 KV0 Medicago truncatula cD... 107 1e-022
gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula ... 105 6e-022
gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone m... 105 6e-022
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 235 bits (507), Expect = 6e-061
Identities = 85/113 (75%), Positives = 99/113 (87%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W+KQNITEVYH WQKLN +R LWKLGTLP GL+TFW RTFPL+RSWH LGLGY
Sbjct: 520 NVFDLVEWKKQNITEVYHNWQKLNHDRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGY 341
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
NPNVN KDI RAAVIHYNGNLKPWLEI +PK++ YW+ +V+Y+ +LRECNIN
Sbjct: 340 NPNVNQKDIERAAVIHYNGNLKPWLEISIPKFKGYWTKYVDYESEYLRECNIN 182
Score = 131 bits (280), Expect = 1e-029
Identities = 63/112 (56%), Positives = 73/112 (65%)
Frame = -1 / +3
Query: 337 MLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CH 158
+LHSR+ + S* T Q FG ISS GF+FPL* +TAA IS LT GL P P C
Sbjct: 186 ILHSRKYSLS*STYFVQ*PLNFGILISSHGFKFPL**ITAALSISFWLTLGL*PRPKTCQ 365
Query: 157 ERSRGNVRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLQSPKSNMF 2
+R GNVRFQ V RP G VP+FH+ L F+FCQ+W TSVMFCF S KS F
Sbjct: 366 DRFSGNVRFQNVIRPGGSVPNFHSCLS*FSFCQLWYTSVMFCFFHSTKSKTF 521
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 185 bits (398), Expect(2) = 5e-053
Identities = 67/90 (74%), Positives = 78/90 (86%)
Frame = +3 / +2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N +R LWKLGTLP GL+TFW RTFPL+RSWH LGLGYNPNVN KDI RAAVIHYNGNLKP
Sbjct: 45392 NHDRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKP 45571
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WLEI +PK++ YW+ +V+Y+ +LRECNIN
Sbjct: 45572 WLEISIPKFKGYWTKYVDYESEYLRECNIN 45661
Score = 92.3 bits (195), Expect(2) = 4e-022
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -1 / -3
Query: 337 MLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CH 158
+LHSR+ + S* T Q FG ISS GF+FPL* +TAA IS LT GL P P C
Sbjct: 45657 ILHSRKYSLS*STYFVQ*PLNFGILISSHGFKFPL**ITAALSISFWLTLGL*PRPKTCQ 45478
Query: 157 ERSRGNVRFQKVTRPAGRVPSFHNSL 80
+R GNVRFQ V RP G VP+FH+ L
Sbjct: 45477 DRFSGNVRFQNVIRPGGSVPNFHSCL 45400
Score = 52.8 bits (109), Expect(2) = 5e-053
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL +W+KQNITEVYH WQKL
Sbjct: 45178 NVFDLVEWKKQNITEVYHNWQKL 45246
Score = 41.8 bits (85), Expect(2) = 4e-022
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / -1
Query: 70 NFCQVW*TSVMFCFLQSPKSNMF 2
+FCQ+W TSVMFCF S KS F
Sbjct: 45245 SFCQLWYTSVMFCFFHSTKSKTF 45177
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 185 bits (398), Expect(2) = 6e-053
Identities = 67/90 (74%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N +R LWKLGTLP GL+TFW RTFPL+RSWH LGLGYNPNVN KDI RAAVIHYNGNLKP
Sbjct: 1194 NHDRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLKP 1373
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WLEI +PK++ YW+ +V+Y+ +LRECNIN
Sbjct: 1374 WLEISIPKFKGYWTKYVDYESEYLRECNIN 1463
Score = 92.3 bits (195), Expect(2) = 5e-022
Identities = 47/86 (54%), Positives = 55/86 (63%)
Frame = -1 / -1
Query: 337 MLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPSPN*CH 158
+LHSR+ + S* T Q FG ISS GF+FPL* +TAA IS LT GL P P C
Sbjct: 1459 ILHSRKYSLS*STYFVQ*PLNFGILISSHGFKFPL**ITAALSISFWLTLGL*PRPKTCQ 1280
Query: 157 ERSRGNVRFQKVTRPAGRVPSFHNSL 80
+R GNVRFQ V RP G VP+FH+ L
Sbjct: 1279 DRFSGNVRFQNVIRPGGSVPNFHSCL 1202
Score = 52.8 bits (109), Expect(2) = 6e-053
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL +W+KQNITEVYH WQKL
Sbjct: 980 NVFDLVEWKKQNITEVYHNWQKL 1048
Score = 41.8 bits (85), Expect(2) = 5e-022
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 70 NFCQVW*TSVMFCFLQSPKSNMF 2
+FCQ+W TSVMFCF S KS F
Sbjct: 1047 SFCQLWYTSVMFCFFHSTKSKTF 979
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 188 bits (406), Expect(2) = 1e-051
Identities = 68/92 (73%), Positives = 81/92 (88%)
Frame = +3 / -2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
N +R LWKLGTLP GL+TFW RTFPL+++WH LGLGYNPNVN KDI RAAV+HYNGN+KP
Sbjct: 52300 NHDRQLWKLGTLPPGLITFWKRTFPLNKAWHVLGLGYNPNVNQKDIDRAAVMHYNGNMKP 52121
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP* 347
WLEI +PK+R YW+ +VNY+ V+LRECNINP*
Sbjct: 52120 WLEISIPKFRGYWTKYVNYNHVYLRECNINP* 52025
Score = 101 bits (215), Expect(2) = 7e-023
Identities = 51/91 (56%), Positives = 58/91 (63%)
Frame = -1 / +3
Query: 352 AVQGFMLHSRRNT*S*LTCADQYLRYFGNPISSQGFRFPL*WMTAARLISLTLTFGLYPS 173
++ G MLHSR+ T* *LT Q G IS+ GF FPL* +TAAR IS LT GL P
Sbjct: 52020 SIYGLMLHSRK*T*L*LTYFVQ*PLNLGILISNHGFMFPL*CITAARSISFWLTLGL*PR 52199
Query: 172 PN*CHERSRGNVRFQKVTRPAGRVPSFHNSL 80
PN CH G VRFQKV RP G VP+FH+ L
Sbjct: 52200 PNTCHALFSGKVRFQKVMRPGGSVPNFHSCL 52292
Score = 45.5 bits (93), Expect(2) = 1e-051
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL W++Q ITEVYH WQ L
Sbjct: 52701 NVFDLVQWKRQKITEVYHNWQNL 52633
Score = 36.3 bits (73), Expect(2) = 7e-023
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1 / +2
Query: 67 FCQVW*TSVMFCFLQSPKSNMF 2
FCQ+W TSV+FC KSN F
Sbjct: 52637 FCQLWYTSVIFCLFHWTKSNTF 52702
>gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF088D03EC 5', mRNA sequence
Length = 645
Score = 193 bits (415), Expect = 3e-048
Identities = 67/112 (59%), Positives = 88/112 (78%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W+K+NIT +YH WQ LNE+R LWKLGTLP GL+TF+N T+PLDR WH LGLGY
Sbjct: 142 NVFDLKEWKKRNITGIYHRWQDLNEDRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGY 321
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+P +N+ +I AAV HYNGN KPWL + + KY+ YWS +V +D +L+ CN+
Sbjct: 322 DPALNLTEIDNAAVXHYNGNFKPWLNLAVSKYKSYWSKYVMFDNPYLQVCNL 477
>gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula cDNA clone pGESD4L15 5' end,
mRNA sequence
Length = 731
Score = 190 bits (409), Expect = 2e-047
Identities = 66/113 (58%), Positives = 90/113 (79%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
NMFDL W+K++IT +YH WQ LNE+R+LWKLGTLP GL+TF+ T PL++SWH LGLGY
Sbjct: 260 NMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGY 439
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
+P+++ +I AAV+HYNGN+KPWLEI + KYR YW+ +V Y+ +LR C ++
Sbjct: 440 SPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLS 598
>gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF024D06FL 5', mRNA sequence
Length = 724
Score = 177 bits (381), Expect = 1e-043
Identities = 61/111 (54%), Positives = 85/111 (76%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ T PLD+SWH LGLGY
Sbjct: 147 NFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 326
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP++++ +I AAV+H+NGN+KPWL+I + +++ WS +V+ + F++ CN
Sbjct: 327 NPSISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 479
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 177 bits (381), Expect = 1e-043
Identities = 61/111 (54%), Positives = 85/111 (76%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ T PLD+SWH LGLGY
Sbjct: 260 NFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 439
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP++++ +I AAV+H+NGN+KPWL+I + +++ WS +V+ + F++ CN
Sbjct: 440 NPSISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 592
>gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula cDNA clone GESD-28P9, mRNA
sequence
Length = 695
Score = 175 bits (377), Expect = 5e-043
Identities = 60/111 (54%), Positives = 84/111 (75%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ T PLD+SWH LG GY
Sbjct: 126 NFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGFGY 305
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
NP++++ +I AAV+H+NGN+KPWL+I + +++ WS +V+ + F++ CN
Sbjct: 306 NPSISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 458
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 150 bits (323), Expect(2) = 2e-039
Identities = 52/90 (57%), Positives = 72/90 (80%)
Frame = +3 / -3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R+LWKLGTLP GL+TF+ T PL++SWH LGLGY+P+++ +I AAV+HYNGN+KP
Sbjct: 86814 NEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKP 86635
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
WLEI + KYR YW+ +V Y+ +LR C ++
Sbjct: 86634 WLEIAMTKYRPYWTKYVKYNHPYLRNCKLS 86545
Score = 42.3 bits (86), Expect(2) = 2e-039
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
NMFDL W+K++IT +YH WQ L
Sbjct: 87198 NMFDLKVWKKKDITGIYHRWQNL 87130
>gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cDNA clone pGVN-63F8 5' end, mRNA
sequence
Length = 593
Score = 105 bits (224), Expect(2) = 6e-039
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +WRK+N+T +YH WQ+ N +R LWKLGTLP GL+TF+ T PLD SWH LG GY
Sbjct: 214 NVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGY 393
Score = 76.7 bits (161), Expect(2) = 6e-039
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3 / +1
Query: 189 NVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
NV+ + I R AV+H+NGN KPWL+IG+ KY+ W H++Y FL++CN +
Sbjct: 397 NVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHTFLQQCNFH 549
>gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula genomic clone 44G15, DNA
sequence
Length = 776
Score = 105 bits (224), Expect(3) = 6e-039
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +3 / +1
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
N +R LWKLGTLP GL+TFW TFPL+RSWH LGLGYNP+VN KDI AAVIH
Sbjct: 541 NHDRQLWKLGTLPPGLMTFWKHTFPLNRSWHVLGLGYNPDVNQKDIESAAVIH 699
Score = 52.4 bits (108), Expect(3) = 6e-039
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N+FDL +W+KQNITEVYH WQKL
Sbjct: 348 NVFDLVEWKKQNITEVYHKWQKL 416
Score = 44.6 bits (91), Expect(3) = 6e-039
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 231 YNGNLKPWLEIGLPKYRKYWSAH 299
YNGN+KPWLEI + K++ YW+ +
Sbjct: 706 YNGNMKPWLEISIQKFQGYWTKY 774
>gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula cDNA clone MtBB29G01 T7, mRNA
sequence
Length = 527
Score = 158 bits (339), Expect = 8e-038
Identities = 53/95 (55%), Positives = 76/95 (80%)
Frame = +3 / +2
Query: 51 YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
YH WQ LNENR LWKLGTLP GL+T+++ T PLD+SWH LGLGYNP++++ +I AAV+H
Sbjct: 2 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVH 181
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
+NGN+KPWL+I + +++ WS +V+ + F++ CN
Sbjct: 182 FNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQACN 286
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 152 bits (326), Expect = 5e-036
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +3 / +2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ T PLD+SWH LGLGY
Sbjct: 410 NFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 589
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPW 254
NP++++ +I AAV+H+NGN+KPW
Sbjct: 590 NPSISMDEINNAAVVHFNGNMKPW 661
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 143 bits (306), Expect(2) = 1e-035
Identities = 48/88 (54%), Positives = 71/88 (80%)
Frame = +3 / +3
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NENR LWKLGTLP GL+T+++ T PLD+SWH LGLGYNP++++ +I AAV+H+NGN+KP
Sbjct: 51087 NENRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMKP 51266
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECN 335
WL+I + +++ WS +V+ + F++ CN
Sbjct: 51267 WLDIAMTQFKPLWSKYVDVELEFVQACN 51350
Score = 37.3 bits (75), Expect(2) = 1e-035
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKL 71
N FDL WR+ TE YH WQ L
Sbjct: 50367 NFFDLDAWRRVKCTEEYHYWQNL 50435
>gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula cDNA clone pDSIL-12F23, mRNA
sequence
Length = 667
Score = 150 bits (323), Expect = 1e-035
Identities = 52/95 (54%), Positives = 73/95 (76%)
Frame = +3 / +3
Query: 51 YHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIH 230
YH WQ NE++ +WK GTLP GL+TF++ T LD+SWH LGLGYNP++++ +I AAVIH
Sbjct: 6 YHYWQNKNEDQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIH 185
Query: 231 YNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECN 335
YNGN+KPWL+I L +Y+ W+ +V+ D F++ CN
Sbjct: 186 YNGNMKPWLDIALNQYKNLWTKYVDSDMEFVQMCN 290
>gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-45a9, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 125396
Score = 100 bits (214), Expect(2) = 3e-035
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +WRK N+T +YH WQ N +R LWKLGTLP GL+TF+ LDRSWH LG GY
Sbjct: 46730 NVFDLVEWRKNNVTGIYHYWQAKNADRTLWKLGTLPPGLLTFYGLI*KLDRSWHVLGFGY 46551
Score = 100 bits (214), Expect(2) = 3e-035
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +WRK N+T +YH WQ N +R LWKLGTLP GL+TF+ LDRSWH LG GY
Sbjct: 105744 NVFDLVEWRKNNVTGIYHYWQAKNADRTLWKLGTLPPGLLTFYGLI*KLDRSWHVLGFGY 105565
Score = 68.9 bits (144), Expect(2) = 3e-035
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3 / -1
Query: 192 VNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
V+ + I + V+H+NGN KPWL+IG+ KY+ W H++Y L+ECN +
Sbjct: 46544 VDPRLIEKGVVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHPLLQECNFH 46395
Score = 68.9 bits (144), Expect(2) = 3e-035
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3 / -3
Query: 192 VNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNIN 341
V+ + I + V+H+NGN KPWL+IG+ KY+ W H++Y L+ECN +
Sbjct: 105558 VDPRLIEKGVVLHFNGNSKPWLKIGIEKYKPLWEKHIDYSHPLLQECNFH 105409
>gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF092D05LF 5', mRNA sequence
Length = 652
Score = 147 bits (316), Expect = 1e-034
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = +3 / +1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+ LDR WH LGLGY
Sbjct: 250 NLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 429
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+ ++ I +AAVIHY+G KPW++IGL +Y+ YWS + +D LR CNI
Sbjct: 430 DSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 585
>gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula cDNA clone pKVKC-10F2, mRNA
sequence
Length = 735
Score = 147 bits (316), Expect = 1e-034
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = +3 / -2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+ LDR WH LGLGY
Sbjct: 659 NLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 480
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+ ++ I +AAVIHY+G KPW++IGL +Y+ YWS + +D LR CNI
Sbjct: 479 DSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 324
>gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula cDNA clone MTUS-47D7, mRNA
sequence
Length = 808
Score = 147 bits (316), Expect = 1e-034
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = +3 / -2
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+ LDR WH LGLGY
Sbjct: 636 NLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 457
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+ ++ I +AAVIHY+G KPW++IGL +Y+ YWS + +D LR CNI
Sbjct: 456 DSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 301
>gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula cDNA clone MTUS-55E11, mRNA
sequence
Length = 775
Score = 147 bits (316), Expect = 1e-034
Identities = 54/112 (48%), Positives = 75/112 (66%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+ LDR WH LGLGY
Sbjct: 580 NLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 401
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
+ ++ I +AAVIHY+G KPW++IGL +Y+ YWS + +D LR CNI
Sbjct: 400 DSGIDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRCNI 245
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 138 bits (296), Expect(2) = 3e-034
Identities = 48/88 (54%), Positives = 69/88 (78%)
Frame = +3 / -2
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE++ +WK GTLP GL+TF++ T LD+SWH LGLGYNP++++ +I AAVIHYNGN+KP
Sbjct: 46606 NEDQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKP 46427
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECN 335
WL+I L +Y+ W+ +V+ D F++ CN
Sbjct: 46426 WLDIALNQYKNLWTKYVDSDMEFVQMCN 46343
Score = 37.3 bits (75), Expect(2) = 3e-034
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQ 65
N+FDL WR++ TE YH WQ
Sbjct: 47090 NIFDLDAWRREKCTEHYHYWQ 47028
>emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 471
Score = 145 bits (312), Expect = 4e-034
Identities = 52/93 (55%), Positives = 72/93 (77%)
Frame = +3 / -1
Query: 72 NENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKP 251
NE+R+LWKLGTLP GL+TF+ T PL++SWH LGLGY+P V+ I AAV+HYNGN+KP
Sbjct: 462 NEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPTVDRSMIENAAVVHYNGNMKP 283
Query: 252 WLEIGLPKYRKYWSAHVNYDQVFLRECNINP*T 350
WL I + KYR YW+ +V Y+ +L++C ++ *+
Sbjct: 282 WLAIAMTKYRSYWTKYVKYNHSYLQKCKLHE*S 184
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 132 bits (283), Expect(2) = 8e-033
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = +3 / -1
Query: 60 WQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNG 239
WQ L N +WKLGTLP L+ F P+D SWH LGLGY +V+ ++ AAVIHYNG
Sbjct: 40784 WQNLRSNMTMWKLGTLPPALIAFRGHVHPIDPSWHMLGLGYQNKTSVEKVKMAAVIHYNG 40605
Query: 240 NLKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWLEIG + +W+ +VNY F+R C+I
Sbjct: 40604 QSKPWLEIGFEHLKPFWTKYVNYSNDFVRNCHI 40506
Score = 38.2 bits (77), Expect(2) = 8e-033
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTWQK 68
N+FDL WR NI E YH+W K
Sbjct: 41291 NVFDLRAWRAANIRETYHSWLK 41226
>gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 667
Score = 133 bits (284), Expect(2) = 1e-031
Identities = 46/83 (55%), Positives = 65/83 (78%)
Frame = +3 / -3
Query: 87 LWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIG 266
+WK GTLP GL+TF++ T LD+SWH LGLGYNP++++ +I AAVIHYNGN+KPWL+I
Sbjct: 611 IWKSGTLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIA 432
Query: 267 LPKYRKYWSAHVNYDQVFLRECN 335
L +Y+ W+ +V+ D F++ CN
Sbjct: 431 LNQYKNLWTKYVDSDMEFVQMCN 363
Score = 24.9 bits (48), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / -1
Query: 33 QNITEVYHTWQKLNENR 83
+ TE YH WQ NE++
Sbjct: 664 EKCTEHYHYWQNKNEDQ 614
>gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula cDNA clone MTUS-16F9, mRNA
sequence
Length = 756
Score = 121 bits (258), Expect(2) = 3e-031
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +3 / -3
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW+LGTLP GL+ F +D WH LGLGY N NV D+ A VIH+NG
Sbjct: 574 QNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGR 395
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ R W+ +V++ F++ CNI
Sbjct: 394 AKPWLDIAFPELRSLWTKYVDFSDKFIKSCNI 299
Score = 35.0 bits (70), Expect(2) = 3e-031
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLN 74
N+FDL WR+ NI+ YH W N
Sbjct: 640 NIFDLEAWRRTNISNKYHHWVAQN 569
>gb|CF068061.1|CF068061 EST668782 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 605
Score = 118 bits (253), Expect = 6e-026
Identities = 41/76 (53%), Positives = 59/76 (77%)
Frame = +3 / +2
Query: 108 PAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKY 287
P GL+TF++ T LD+SWH LGLGYNP++++ +I AAVIHYNGN+KPWL+I L +Y+
Sbjct: 2 PPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIALNQYKNL 181
Query: 288 WSAHVNYDQVFLRECN 335
W+ +V+ D F++ CN
Sbjct: 182 WTKYVDSDMEFVQMCN 229
>gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF012D10FL 5', mRNA sequence
Length = 685
Score = 118 bits (252), Expect = 8e-026
Identities = 41/65 (63%), Positives = 54/65 (83%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL +W+K +IT +YH WQ +NE+R+LWKLGTLP GL+TF+ T PL++SWH LGLGY
Sbjct: 486 NIFDLKEWKKXDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGY 665
Query: 183 NPNVN 197
+P VN
Sbjct: 666 SPTVN 680
>gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Medicago truncatula cDNA clone
NF092H11LF 5', mRNA sequence
Length = 632
Score = 117 bits (251), Expect = 1e-025
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +3 / +3
Query: 3 NMFDLGDWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGY 182
N+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+ LDR WH LGLGY
Sbjct: 357 NLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 536
Query: 183 NPNVNVKDIRRAAVIHYNGNLKPWLEIGL 269
+ ++ I +AAVIHY+G KPW++IGL
Sbjct: 537 DSGIDTNKIEQAAVIHYDGIRKPWMDIGL 623
>gb|CG956619.1|CG956619 MBEFU73TF mth2 Medicago truncatula genomic clone 47M1, DNA sequence
Length = 786
Score = 110 bits (234), Expect(2) = 4e-025
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3 / +3
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW LGTLP GL+ F +D WH LGLGY N N+ D + A V+H+NG
Sbjct: 252 QNIKSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGW 431
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ + W+ +V++ F+ C+I
Sbjct: 432 AKPWLDIAFPQLKPLWTKYVDFSDNFIESCHI 527
Score = 27.2 bits (53), Expect(2) = 4e-025
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 24 WRKQNITEVYHTW 62
WRK NI+ YH W
Sbjct: 5 WRKTNISYTYHYW 43
>gb|AC148653.1| Medicago truncatula chromosome unknown clone mte1-26k20, *** SEQUENCING
IN PROGRESS ***, 11 unordered pieces
Length = 147635
Score = 110 bits (234), Expect(2) = 1e-024
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3 / -2
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW LGTLP GL+ F +D WH LGLGY N N+ D + A V+H+NG
Sbjct: 24229 QNIKSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGW 24050
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ + W+ +V++ F+ C+I
Sbjct: 24049 AKPWLDIAFPQLKPLWTKYVDFSDNFIESCHI 23954
Score = 33.1 bits (66), Expect(2) = 1e-024
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 3 NMFDLGDWRKQNITEVYHTW 62
N+ DL WRK NI+ YH W
Sbjct: 24497 NILDLEAWRKTNISYTYHYW 24438
>gb|CG938710.1|CG938710 MBEEA61TRC mth2 Medicago truncatula genomic clone 36K1, DNA
sequence
Length = 765
Score = 110 bits (234), Expect = 3e-023
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3 / +1
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW LGTLP GL+ F +D WH LGLGY N N+ D + A V+H+NG
Sbjct: 247 QNIKSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGW 426
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ + W+ +V++ F+ C+I
Sbjct: 427 AKPWLDIAFPQLKPLWTKYVDFSDNFIESCHI 522
>gb|CG946208.1|CG946208 MBEEA63TRC mth2 Medicago truncatula genomic clone 36K5, DNA
sequence
Length = 912
Score = 110 bits (234), Expect = 3e-023
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3 / +3
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW LGTLP GL+ F +D WH LGLGY N N+ D + A V+H+NG
Sbjct: 246 QNIKSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGW 425
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ + W+ +V++ F+ C+I
Sbjct: 426 AKPWLDIAFPQLKPLWTKYVDFSDNFIESCHI 521
>gb|CG965021.1|CG965021 MBEGJ85TR mth2 Medicago truncatula genomic clone 50O2, DNA sequence
Length = 794
Score = 110 bits (234), Expect = 3e-023
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3 / +3
Query: 63 QKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGN 242
Q + + LW LGTLP GL+ F +D WH LGLGY N N+ D + A V+H+NG
Sbjct: 249 QNIKSDLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGYQENTNLVDAKNAGVVHFNGW 428
Query: 243 LKPWLEIGLPKYRKYWSAHVNYDQVFLRECNI 338
KPWL+I P+ + W+ +V++ F+ C+I
Sbjct: 429 AKPWLDIAFPQLKPLWTKYVDFSDNFIESCHI 524
>gb|BE205173.1|BE205173 EST397849 KV0 Medicago truncatula cDNA clone pKV0-20H11, mRNA
sequence
Length = 585
Score = 107 bits (229), Expect = 1e-022
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +3 / -1
Query: 126 FWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKYWSAHVN 305
F++ T LD+SWH LGLGYNP++++ +I AAVIHYNGN+KPWL+I L +Y+ W+ +V+
Sbjct: 585 FYSTTKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMKPWLDIALNQYKNLWTKYVD 406
Query: 306 YDQVFLRECN 335
D F++ CN
Sbjct: 405 SDMEFVQMCN 376
>gb|BG588402.1|BG588402 EST490211 MHRP- Medicago truncatula cDNA clone pMHRP-53G17, mRNA
sequence
Length = 812
Score = 105 bits (224), Expect = 6e-022
Identities = 34/78 (43%), Positives = 54/78 (69%)
Frame = +3 / +1
Query: 108 PAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKY 287
PA L+ F N+ +PL+ SW + GLG++ ++ I+ A V+HYNG +KPWL++G+P Y+ Y
Sbjct: 502 PASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPNYKSY 681
Query: 288 WSAHVNYDQVFLRECNIN 341
W ++N + L ECN+N
Sbjct: 682 WKKYLNKEDQLLSECNVN 735
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
Length = 127058
Score = 105 bits (224), Expect = 6e-022
Identities = 34/78 (43%), Positives = 54/78 (69%)
Frame = +3 / -3
Query: 108 PAGLVTFWNRTFPLDRSWHQLGLGYNPNVNVKDIRRAAVIHYNGNLKPWLEIGLPKYRKY 287
PA L+ F N+ +PL+ SW + GLG++ ++ I+ A V+HYNG +KPWL++G+P Y+ Y
Sbjct: 33129 PASLLAFENKIYPLNESWVRSGLGHDYKIDSNSIKSAPVLHYNGKMKPWLDLGIPNYKSY 32950
Query: 288 WSAHVNYDQVFLRECNIN 341
W ++N + L ECN+N
Sbjct: 32949 WKKYLNKEDQLLSECNVN 32896
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 625,102,200
Number of Sequences: 392609
Number of extensions: 8840339
Number of successful extensions: 47168
Number of sequences better than 1.0e-020: 47
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 18206791776
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)