TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3064721.2.1
(689 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 118 1e-055
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 84 4e-044
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 84 8e-044
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 78 1e-043
gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula ... 107 3e-043
gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell cultu... 108 6e-043
gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower M... 102 4e-040
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 102 4e-040
gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula c... 102 2e-039
gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cD... 99 5e-036
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 102 4e-035
gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-... 99 4e-034
gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula g... 69 2e-033
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 68 2e-031
gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula c... 77 4e-029
gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula c... 77 4e-029
gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula c... 77 4e-029
gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Med... 77 4e-029
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 67 1e-028
gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula c... 56 2e-028
gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower M... 104 6e-028
gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula... 67 9e-028
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 62 3e-026
gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula c... 62 2e-025
emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17... 61 9e-024
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 59 1e-023
gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula c... 62 2e-022
gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula g... 99 7e-022
gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Med... 77 3e-021
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 118 bits (253), Expect(3) = 1e-055
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2 / -3
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNR 163
ACGWAYGMN+FDL W+KQNITEVYH WQKLN +R LWKLGTLP GL+TFW R
Sbjct: 544 ACGWAYGMNVFDLVEWKKQNITEVYHNWQKLNHDRQLWKLGTLPPGLITFWKR 386
Score = 90.0 bits (190), Expect(2) = 7e-025
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = -3 / +3
Query: 165 MRFQKVTRPAGRVPSFHNSLFSFNFCQVW*TSVMFCFLHPDKSNMFMPYAQPQA 4
+RFQ V RP G VP+FH+ L F+FCQ+W TSVMFCF H KS F+PYA PQA
Sbjct: 384 VRFQNVIRPGGSVPNFHSCLS*FSFCQLWYTSVMFCFFHSTKSKTFIPYAHPQA 545
Score = 84.0 bits (177), Expect(3) = 1e-055
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1 / -3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
TFPL+RSWH LGLGYNPNVN+KDI RA VIH+NGNLK
Sbjct: 385 TFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLK 275
Score = 53.8 bits (111), Expect(3) = 1e-055
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2 / -3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WLEI +PK++ YW+ +V+Y+ +L+ECNIN
Sbjct: 271 WLEISIPKFKGYWTKYVDYESEYLRECNIN 182
Score = 45.1 bits (92), Expect(2) = 7e-025
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -1 / +3
Query: 302 WAIQSQARSFKFPLKWMTVARLISFSLTFGLYPSPS*CHERSRGNV 165
+ I + FKFPL +T A ISF LT GL P P C +R GNV
Sbjct: 249 FGILISSHGFKFPL**ITAALSISFWLTLGL*PRPKTCQDRFSGNV 386
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 84.0 bits (177), Expect(4) = 4e-044
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1 / +2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
TFPL+RSWH LGLGYNPNVN+KDI RA VIH+NGNLK
Sbjct: 45458 TFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLK 45568
Score = 75.3 bits (158), Expect(4) = 4e-044
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2 / +1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
ACGWAYGMN+FDL W+KQNITEVYH WQKL
Sbjct: 45154 ACGWAYGMNVFDLVEWKKQNITEVYHNWQKL 45246
Score = 53.8 bits (111), Expect(4) = 4e-044
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WLEI +PK++ YW+ +V+Y+ +L+ECNIN
Sbjct: 45572 WLEISIPKFKGYWTKYVDYESEYLRECNIN 45661
Score = 46.4 bits (95), Expect(4) = 4e-044
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 98 NENRLLWKLGTLPAGLVTFWNR 163
N +R LWKLGTLP GL+TFW R
Sbjct: 45392 NHDRQLWKLGTLPPGLITFWKR 45457
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 84.0 bits (177), Expect(4) = 8e-044
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
TFPL+RSWH LGLGYNPNVN+KDI RA VIH+NGNLK
Sbjct: 1260 TFPLNRSWHVLGLGYNPNVNQKDIERAAVIHYNGNLK 1370
Score = 75.3 bits (158), Expect(4) = 8e-044
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2 / +2
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
ACGWAYGMN+FDL W+KQNITEVYH WQKL
Sbjct: 956 ACGWAYGMNVFDLVEWKKQNITEVYHNWQKL 1048
Score = 53.8 bits (111), Expect(4) = 8e-044
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WLEI +PK++ YW+ +V+Y+ +L+ECNIN
Sbjct: 1374 WLEISIPKFKGYWTKYVDYESEYLRECNIN 1463
Score = 46.4 bits (95), Expect(4) = 8e-044
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 98 NENRLLWKLGTLPAGLVTFWNR 163
N +R LWKLGTLP GL+TFW R
Sbjct: 1194 NHDRQLWKLGTLPPGLITFWKR 1259
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 78.0 bits (164), Expect(4) = 1e-043
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1 / -2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
TFPL+++WH LGLGYNPNVN+KDI RA V+H+NGN+K
Sbjct: 52234 TFPLNKAWHVLGLGYNPNVNQKDIDRAAVMHYNGNMK 52124
Score = 72.5 bits (152), Expect(4) = 1e-043
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
HACGWAYGMN+FDL W++Q ITEVYH WQ L
Sbjct: 52728 HACGWAYGMNVFDLVQWKRQKITEVYHNWQNL 52633
Score = 63.4 bits (132), Expect(4) = 1e-043
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2 / -2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP* 376
WLEI +PK+R YW+ +VNY+ V+L+ECNINP*
Sbjct: 52120 WLEISIPKFRGYWTKYVNYNHVYLRECNINP* 52025
Score = 46.4 bits (95), Expect(4) = 1e-043
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / -2
Query: 98 NENRLLWKLGTLPAGLVTFWNR 163
N +R LWKLGTLP GL+TFW R
Sbjct: 52300 NHDRQLWKLGTLPPGLITFWKR 52235
>gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula cDNA clone pGESD4L15 5' end,
mRNA sequence
Length = 731
Score = 107 bits (228), Expect(3) = 3e-043
Identities = 37/52 (71%), Positives = 46/52 (88%)
Frame = +2 / +2
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
+ACGWAYGMNMFDL W+K++IT +YH WQ LNE+R+LWKLGTLP GL+TF+
Sbjct: 233 NACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFY 388
Score = 62.9 bits (131), Expect(3) = 3e-043
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1 / +2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PL++SWH LGLGY+P+++ +I A V+H+NGN+K
Sbjct: 395 THPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMK 505
Score = 44.6 bits (91), Expect(3) = 3e-043
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WLEI + KYR YW+ +V Y+ +L+ C ++
Sbjct: 509 WLEIAMTKYRPYWTKYVKYNHPYLRNCKLS 598
>gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF088D03EC 5', mRNA sequence
Length = 645
Score = 108 bits (230), Expect(3) = 6e-043
Identities = 37/52 (71%), Positives = 45/52 (86%)
Frame = +2 / +1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWN 160
ACGWA+GMN+FDL W+K+NIT +YH WQ LNE+R LWKLGTLP GL+TF+N
Sbjct: 118 ACGWAFGMNVFDLKEWKKRNITGIYHRWQDLNEDRTLWKLGTLPPGLITFYN 273
Score = 61.6 bits (128), Expect(3) = 6e-043
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T+PLDR WH LGLGY+P +N +I A V H+NGN K
Sbjct: 277 TYPLDRGWHVLGLGYDPALNLTEIDNAAVXHYNGNFK 387
Score = 44.1 bits (90), Expect(3) = 6e-043
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
WL + + KY+ YWS +V +D +LQ CN+
Sbjct: 391 WLNLAVSKYKSYWSKYVMFDNPYLQVCNL 477
>gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF024D06FL 5', mRNA sequence
Length = 724
Score = 102 bits (217), Expect(3) = 4e-040
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2 / +3
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
AC WAYGMN FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ + L
Sbjct: 123 ACAWAYGMNFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPL 293
Score = 67.0 bits (140), Expect(3) = 4e-040
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LGLGYNP+++ +I A V+HFNGN+K
Sbjct: 282 TKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMK 392
Score = 35.0 bits (70), Expect(3) = 4e-040
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2 / +3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I + +++ WS +V+ + F+Q CN
Sbjct: 396 WLDIAMTQFKPLWSKYVDVELEFVQACN 479
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 102 bits (217), Expect(3) = 4e-040
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2 / +2
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
AC WAYGMN FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ + L
Sbjct: 236 ACAWAYGMNFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPL 406
Score = 67.0 bits (140), Expect(3) = 4e-040
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1 / +2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LGLGYNP+++ +I A V+HFNGN+K
Sbjct: 395 TKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMK 505
Score = 35.0 bits (70), Expect(3) = 4e-040
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2 / +2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I + +++ WS +V+ + F+Q CN
Sbjct: 509 WLDIAMTQFKPLWSKYVDVELEFVQACN 592
>gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula cDNA clone GESD-28P9, mRNA
sequence
Length = 695
Score = 102 bits (217), Expect(3) = 2e-039
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2 / +3
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
AC WAYGMN FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ + L
Sbjct: 102 ACAWAYGMNFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPL 272
Score = 65.2 bits (136), Expect(3) = 2e-039
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LG GYNP+++ +I A V+HFNGN+K
Sbjct: 261 TKPLDKSWHVLGFGYNPSISMDEINNAAVVHFNGNMK 371
Score = 35.0 bits (70), Expect(3) = 2e-039
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2 / +3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I + +++ WS +V+ + F+Q CN
Sbjct: 375 WLDIAMTQFKPLWSKYVDVELEFVQACN 458
>gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cDNA clone pGVN-63F8 5' end, mRNA
sequence
Length = 593
Score = 99.1 bits (210), Expect(4) = 5e-036
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2 / +1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
ACGWA+GMN+FDL WRK+N+T +YH WQ+ N +R LWKLGTLP GL+TF+
Sbjct: 190 ACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFY 342
Score = 49.2 bits (101), Expect(4) = 5e-036
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WL+IG+ KY+ W H++Y FLQ+CN +
Sbjct: 460 WLKIGIEKYKPLWEKHIDYSHTFLQQCNFH 549
Score = 30.9 bits (61), Expect(4) = 5e-036
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 166 TFPLDRSWHQLGLGY 210
T PLD SWH LG GY
Sbjct: 349 TEPLDPSWHVLGFGY 393
Score = 29.0 bits (57), Expect(4) = 5e-036
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 217 NVNEKDIRRATVIHFNGNLK 276
NV+ + I R V+HFNGN K
Sbjct: 397 NVDPQLIERGAVLHFNGNSK 456
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 102 bits (217), Expect(2) = 4e-035
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +2 / +2
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
AC WAYGMN FDL WR+ TE YH WQ LNENR LWKLGTLP GL+T+++ + L
Sbjct: 386 ACAWAYGMNFFDLDAWRRVKCTEEYHYWQNLNENRTLWKLGTLPPGLITYYSTTKPL 556
Score = 67.0 bits (140), Expect(2) = 4e-035
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1 / +2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LGLGYNP+++ +I A V+HFNGN+K
Sbjct: 545 TKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMK 655
>gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-45a9, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 125396
Score = 99.1 bits (210), Expect(4) = 4e-034
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / -1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRI 166
ACGWA+GMN+FDL WRK N+T +YH WQ N +R LWKLGTLP GL+TF+ I
Sbjct: 46754 ACGWAFGMNVFDLVEWRKNNVTGIYHYWQAKNADRTLWKLGTLPPGLLTFYGLI 46593
Score = 99.1 bits (210), Expect(4) = 4e-034
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +2 / -3
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRI 166
ACGWA+GMN+FDL WRK N+T +YH WQ N +R LWKLGTLP GL+TF+ I
Sbjct: 105768 ACGWAFGMNVFDLVEWRKNNVTGIYHYWQAKNADRTLWKLGTLPPGLLTFYGLI 105607
Score = 46.9 bits (96), Expect(4) = 4e-034
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WL+IG+ KY+ W H++Y LQECN +
Sbjct: 46484 WLKIGIEKYKPLWEKHIDYSHPLLQECNFH 46395
Score = 46.9 bits (96), Expect(4) = 4e-034
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2 / -3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WL+IG+ KY+ W H++Y LQECN +
Sbjct: 105498 WLKIGIEKYKPLWEKHIDYSHPLLQECNFH 105409
Score = 29.9 bits (59), Expect(4) = 4e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 175 LDRSWHQLGLGY 210
LDRSWH LG GY
Sbjct: 46586 LDRSWHVLGFGY 46551
Score = 29.9 bits (59), Expect(4) = 4e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 175 LDRSWHQLGLGY 210
LDRSWH LG GY
Sbjct: 105600 LDRSWHVLGFGY 105565
Score = 25.4 bits (49), Expect(4) = 4e-034
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / -1
Query: 220 VNEKDIRRATVIHFNGNLK 276
V+ + I + V+HFNGN K
Sbjct: 46544 VDPRLIEKGVVLHFNGNSK 46488
Score = 25.4 bits (49), Expect(4) = 4e-034
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 220 VNEKDIRRATVIHFNGNLK 276
V+ + I + V+HFNGN K
Sbjct: 105558 VDPRLIEKGVVLHFNGNSK 105502
>gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula genomic clone 44G15, DNA
sequence
Length = 776
Score = 68.9 bits (144), Expect(5) = 2e-033
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1 / +1
Query: 163 HTFPLDRSWHQLGLGYNPNVNEKDIRRATVIH 258
HTFPL+RSWH LGLGYNP+VN+KDI A VIH
Sbjct: 604 HTFPLNRSWHVLGLGYNPDVNQKDIESAAVIH 699
Score = 53.3 bits (110), Expect(5) = 2e-033
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 26 MNMFDLSGWRKQNITEVYHTWQKL 97
MN+FDL W+KQNITEVYH WQKL
Sbjct: 345 MNVFDLVEWKKQNITEVYHKWQKL 416
Score = 43.2 bits (88), Expect(5) = 2e-033
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 98 NENRLLWKLGTLPAGLVTFW 157
N +R LWKLGTLP GL+TFW
Sbjct: 541 NHDRQLWKLGTLPPGLMTFW 600
Score = 26.7 bits (52), Expect(5) = 2e-033
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 281 WLEIGLPKYRKYWSAH 328
WLEI + K++ YW+ +
Sbjct: 727 WLEISIQKFQGYWTKY 774
Score = 26.7 bits (52), Expect(5) = 2e-033
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / +2
Query: 5 ACGWAYGM 28
ACGWAYGM
Sbjct: 320 ACGWAYGM 343
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 67.5 bits (141), Expect(4) = 2e-031
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
+ACGWAYGMNMFDL W+K++IT +YH WQ L
Sbjct: 87225 NACGWAYGMNMFDLKVWKKKDITGIYHRWQNL 87130
Score = 62.9 bits (131), Expect(4) = 2e-031
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1 / -3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PL++SWH LGLGY+P+++ +I A V+H+NGN+K
Sbjct: 86748 THPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMK 86638
Score = 44.6 bits (91), Expect(4) = 2e-031
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2 / -3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNIN 370
WLEI + KYR YW+ +V Y+ +L+ C ++
Sbjct: 86634 WLEIAMTKYRPYWTKYVKYNHPYLRNCKLS 86545
Score = 42.8 bits (87), Expect(4) = 2e-031
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +2 / -3
Query: 98 NENRLLWKLGTLPAGLVTFW 157
NE+R+LWKLGTLP GL+TF+
Sbjct: 86814 NEDRVLWKLGTLPPGLMTFY 86755
>gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula cDNA clone MTUS-47D7, mRNA
sequence
Length = 808
Score = 77.1 bits (162), Expect(3) = 4e-029
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2 / -2
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
+AC WA+GMN+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+I L
Sbjct: 663 NACTWAFGMNLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMIL 490
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / -2
Query: 175 LDRSWHQLGLGYNPNVNEKDIRRATVIHFNG 267
LDR WH LGLGY+ ++ I +A VIH++G
Sbjct: 492 LDRRWHILGLGYDSGIDTNKIEQAAVIHYDG 400
Score = 44.1 bits (90), Expect(3) = 4e-029
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / -2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
W++IGL +Y+ YWS + +D L+ CNI
Sbjct: 387 WMDIGLGRYKSYWSKFMKFDHPLLRRCNI 301
>gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula cDNA clone MTUS-55E11, mRNA
sequence
Length = 775
Score = 77.1 bits (162), Expect(3) = 4e-029
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2 / -1
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
+AC WA+GMN+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+I L
Sbjct: 607 NACTWAFGMNLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMIL 434
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / -1
Query: 175 LDRSWHQLGLGYNPNVNEKDIRRATVIHFNG 267
LDR WH LGLGY+ ++ I +A VIH++G
Sbjct: 436 LDRRWHILGLGYDSGIDTNKIEQAAVIHYDG 344
Score = 44.1 bits (90), Expect(3) = 4e-029
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / -1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
W++IGL +Y+ YWS + +D L+ CNI
Sbjct: 331 WMDIGLGRYKSYWSKFMKFDHPLLRRCNI 245
>gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula cDNA clone pKVKC-10F2, mRNA
sequence
Length = 735
Score = 77.1 bits (162), Expect(3) = 4e-029
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2 / -2
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
+AC WA+GMN+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+I L
Sbjct: 686 NACTWAFGMNLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMIL 513
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / -2
Query: 175 LDRSWHQLGLGYNPNVNEKDIRRATVIHFNG 267
LDR WH LGLGY+ ++ I +A VIH++G
Sbjct: 515 LDRRWHILGLGYDSGIDTNKIEQAAVIHYDG 423
Score = 44.1 bits (90), Expect(3) = 4e-029
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / -2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
W++IGL +Y+ YWS + +D L+ CNI
Sbjct: 410 WMDIGLGRYKSYWSKFMKFDHPLLRRCNI 324
>gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF092D05LF 5', mRNA sequence
Length = 652
Score = 77.1 bits (162), Expect(3) = 4e-029
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2 / +1
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
+AC WA+GMN+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+I L
Sbjct: 223 NACTWAFGMNLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMIL 396
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 175 LDRSWHQLGLGYNPNVNEKDIRRATVIHFNG 267
LDR WH LGLGY+ ++ I +A VIH++G
Sbjct: 394 LDRRWHILGLGYDSGIDTNKIEQAAVIHYDG 486
Score = 44.1 bits (90), Expect(3) = 4e-029
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
W++IGL +Y+ YWS + +D L+ CNI
Sbjct: 499 WMDIGLGRYKSYWSKFMKFDHPLLRRCNI 585
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 67.0 bits (140), Expect(4) = 1e-028
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LGLGYNP+++ +I A V+HFNGN+K
Sbjct: 51153 TKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMK 51263
Score = 59.7 bits (124), Expect(4) = 1e-028
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +2 / +3
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKL 97
AC WAYGMN FDL WR+ TE YH WQ L
Sbjct: 50343 ACAWAYGMNFFDLDAWRRVKCTEEYHYWQNL 50435
Score = 45.5 bits (93), Expect(4) = 1e-028
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 98 NENRLLWKLGTLPAGLVTFWNRIRSL 175
NENR LWKLGTLP GL+T+++ + L
Sbjct: 51087 NENRTLWKLGTLPPGLITYYSTTKPL 51164
Score = 35.0 bits (70), Expect(4) = 1e-028
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2 / +3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I + +++ WS +V+ + F+Q CN
Sbjct: 51267 WLDIAMTQFKPLWSKYVDVELEFVQACN 51350
>gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula cDNA clone MTUS-16F9, mRNA
sequence
Length = 756
Score = 56.1 bits (116), Expect(4) = 2e-028
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2 / -3
Query: 8 CGWAYGMNMFDLSGWRKQNITEVYHTWQKLN 100
C WAYGMN+FDL WR+ NI+ YH W N
Sbjct: 661 CAWAYGMNIFDLEAWRRTNISNKYHHWVAQN 569
Score = 54.2 bits (112), Expect(4) = 2e-028
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +1 / -3
Query: 163 HTFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
H +D WH LGLGY N N D+ A VIHFNG K
Sbjct: 502 HVHVIDPFWHMLGLGYQENTNVDDVENAGVIHFNGRAK 389
Score = 39.1 bits (79), Expect(4) = 2e-028
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2 / -3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
WL+I P+ R W+ +V++ F++ CNI
Sbjct: 385 WLDIAFPELRSLWTKYVDFSDKFIKSCNI 299
Score = 32.7 bits (65), Expect(4) = 2e-028
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 89 QKLNENRLLWKLGTLPAGLVTFWNRI 166
Q + + LW+LGTLP GL+ F +
Sbjct: 574 QNIKSDLSLWQLGTLPPGLIAFHGHV 497
>gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF012D10FL 5', mRNA sequence
Length = 685
Score = 104 bits (221), Expect(2) = 6e-028
Identities = 35/52 (67%), Positives = 45/52 (86%)
Frame = +2 / +3
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
+ACGWAYGMN+FDL W+K +IT +YH WQ +NE+R+LWKLGTLP GL+TF+
Sbjct: 459 NACGWAYGMNIFDLKEWKKXDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFY 614
Score = 41.4 bits (84), Expect(2) = 6e-028
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVN 225
T PL++SWH LGLGY+P VN
Sbjct: 621 THPLNKSWHVLGLGYSPTVN 680
>gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula cDNA clone MtBB29G01 T7, mRNA
sequence
Length = 527
Score = 67.0 bits (140), Expect(3) = 9e-028
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +1 / +2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PLD+SWH LGLGYNP+++ +I A V+HFNGN+K
Sbjct: 89 TKPLDKSWHVLGLGYNPSISMDEINNAAVVHFNGNMK 199
Score = 60.6 bits (126), Expect(3) = 9e-028
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 77 YHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
YH WQ LNENR LWKLGTLP GL+T+++ + L
Sbjct: 2 YHYWQNLNENRTLWKLGTLPPGLITYYSTTKPL 100
Score = 35.0 bits (70), Expect(3) = 9e-028
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2 / +2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I + +++ WS +V+ + F+Q CN
Sbjct: 203 WLDIAMTQFKPLWSKYVDVELEFVQACN 286
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 62.5 bits (130), Expect(4) = 3e-026
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1 / -2
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T LD+SWH LGLGYNP+++ +I A VIH+NGN+K
Sbjct: 46540 TKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMK 46430
Score = 57.9 bits (120), Expect(4) = 3e-026
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2 / -1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQ 91
AC W YGMN+FDL WR++ TE YH WQ
Sbjct: 47114 ACAWTYGMNIFDLDAWRREKCTEHYHYWQ 47028
Score = 41.4 bits (84), Expect(4) = 3e-026
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2 / -2
Query: 98 NENRLLWKLGTLPAGLVTFWNRIRSL 175
NE++ +WK GTLP GL+TF++ +SL
Sbjct: 46606 NEDQTIWKSGTLPPGLITFYSTTKSL 46529
Score = 38.2 bits (77), Expect(4) = 3e-026
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2 / -2
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I L +Y+ W+ +V+ D F+Q CN
Sbjct: 46426 WLDIALNQYKNLWTKYVDSDMEFVQMCN 46343
>gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula cDNA clone pDSIL-12F23, mRNA
sequence
Length = 667
Score = 62.5 bits (130), Expect(3) = 2e-025
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1 / +3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T LD+SWH LGLGYNP+++ +I A VIH+NGN+K
Sbjct: 93 TKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMK 203
Score = 53.8 bits (111), Expect(3) = 2e-025
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 77 YHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
YH WQ NE++ +WK GTLP GL+TF++ +SL
Sbjct: 6 YHYWQNKNEDQTIWKSGTLPPGLITFYSTTKSL 104
Score = 38.2 bits (77), Expect(3) = 2e-025
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2 / +3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I L +Y+ W+ +V+ D F+Q CN
Sbjct: 207 WLDIALNQYKNLWTKYVDSDMEFVQMCN 290
>emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 471
Score = 61.1 bits (127), Expect(3) = 9e-024
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1 / -1
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T PL++SWH LGLGY+P V+ I A V+H+NGN+K
Sbjct: 396 THPLNKSWHVLGLGYSPTVDRSMIENAAVVHYNGNMK 286
Score = 45.1 bits (92), Expect(3) = 9e-024
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2 / -1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNINP*T 379
WL I + KYR YW+ +V Y+ +LQ+C ++ *+
Sbjct: 282 WLAIAMTKYRSYWTKYVKYNHSYLQKCKLHE*S 184
Score = 42.8 bits (87), Expect(3) = 9e-024
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +2 / -1
Query: 98 NENRLLWKLGTLPAGLVTFW 157
NE+R+LWKLGTLP GL+TF+
Sbjct: 462 NEDRVLWKLGTLPPGLMTFY 403
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 58.8 bits (122), Expect(4) = 1e-023
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +2 / -1
Query: 8 CGWAYGMNMFDLSGWRKQNITEVYHTWQK 94
C WAYGMN+FDL WR NI E YH+W K
Sbjct: 41312 CAWAYGMNVFDLRAWRAANIRETYHSWLK 41226
Score = 52.8 bits (109), Expect(4) = 1e-023
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1 / -1
Query: 163 HTFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
H P+D SWH LGLGY + + ++ A VIH+NG K
Sbjct: 40709 HVHPIDPSWHMLGLGYQNKTSVEKVKMAAVIHYNGQSK 40596
Score = 40.0 bits (81), Expect(4) = 1e-023
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2 / -1
Query: 86 WQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
WQ L N +WKLGTLP L+ F + +
Sbjct: 40784 WQNLRSNMTMWKLGTLPPALIAFRGHVHPI 40695
Score = 39.6 bits (80), Expect(4) = 1e-023
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECNI 367
WLEIG + +W+ +VNY F++ C+I
Sbjct: 40592 WLEIGFEHLKPFWTKYVNYSNDFVRNCHI 40506
>gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 667
Score = 62.5 bits (130), Expect(4) = 2e-022
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1 / -3
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRRATVIHFNGNLK 276
T LD+SWH LGLGYNP+++ +I A VIH+NGN+K
Sbjct: 560 TKSLDKSWHVLGLGYNPSISMDEINNAAVIHYNGNMK 450
Score = 38.2 bits (77), Expect(4) = 2e-022
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2 / -3
Query: 281 WLEIGLPKYRKYWSAHVNYDQVFLQECN 364
WL+I L +Y+ W+ +V+ D F+Q CN
Sbjct: 446 WLDIALNQYKNLWTKYVDSDMEFVQMCN 363
Score = 35.9 bits (72), Expect(4) = 2e-022
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / -3
Query: 113 LWKLGTLPAGLVTFWNRIRSL 175
+WK GTLP GL+TF++ +SL
Sbjct: 611 IWKSGTLPPGLITFYSTTKSL 549
Score = 24.9 bits (48), Expect(4) = 2e-022
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 59 QNITEVYHTWQKLNENR 109
+ TE YH WQ NE++
Sbjct: 664 EKCTEHYHYWQNKNEDQ 614
>gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula genomic clone 78A1, DNA sequence
Length = 914
Score = 99.1 bits (210), Expect(2) = 7e-022
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = +2 / +1
Query: 5 ACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFW 157
ACGWA+GMN+FDL WRK+N+T +YH WQ+ N +R LWKLGTLP GL+TF+
Sbjct: 673 ACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFY 825
Score = 25.8 bits (50), Expect(2) = 7e-022
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1 / +1
Query: 166 TFPLDRSWHQLGLGYNPNVNEKDIRR 243
T PLD SWH LG + + D +R
Sbjct: 832 TEPLDPSWHVLGFWLHKR*SSVDRKR 909
>gb|BG453366.1|BG453366 NF092H11LF1F1093 Developing leaf Medicago truncatula cDNA clone
NF092H11LF 5', mRNA sequence
Length = 632
Score = 77.1 bits (162), Expect(2) = 3e-021
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2 / +3
Query: 2 HACGWAYGMNMFDLSGWRKQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRIRSL 175
+AC WA+GMN+FDL WR+ N+T VYH + + N L+ G+LP G +TF+N+I L
Sbjct: 330 NACTWAFGMNLFDLQQWRQHNLTGVYHKYLQRGSNMPLFNTGSLPLGWLTFYNKIMIL 503
Score = 46.0 bits (94), Expect(2) = 3e-021
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 175 LDRSWHQLGLGYNPNVNEKDIRRATVIHFNG 267
LDR WH LGLGY+ ++ I +A VIH++G
Sbjct: 501 LDRRWHILGLGYDSGIDTNKIEQAAVIHYDG 593
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 694,573,720
Number of Sequences: 392609
Number of extensions: 9665422
Number of successful extensions: 43916
Number of sequences better than 1.0e-020: 38
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 22057602875
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)