TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3054736.2.1
         (725 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CA920629.1|CA920629  EST638347 MTUS Medicago truncatula c...   154   2e-036
gb|BQ148856.1|BQ148856  NF083B11FL1F1092 Developing flower M...   131   1e-029
gb|AJ499253.1|AJ499253  AJ499253 MTGIM Medicago truncatula c...   109   6e-023

>gb|CA920629.1|CA920629 EST638347 MTUS Medicago truncatula cDNA clone MTUS-30E1, mRNA
           sequence
          Length = 748

 Score =  154 bits (330), Expect = 2e-036
 Identities = 63/103 (61%), Positives = 76/103 (73%)
 Frame = +3 / -2

                                                                       
Query: 48  LLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAM 227
           LL  EYF+HA   +YALS++VV++L   ++DS RMF  EDVTIGAWMLAMNVKHE+N  +
Sbjct: 708 LLEREYFLHAYVPIYALSADVVQSLVFLRNDSFRMFSNEDVTIGAWMLAMNVKHENNLEL 529

                                                      
Query: 228 CDSVCTPTSIAVWDSKKCSGTCNVADKIKQLHNTTVCSKSPTL 356
           C S CT TSIAVWD  KCSG CN   K+ +LH    CS+SPTL
Sbjct: 528 CASDCTATSIAVWDIPKCSGLCNPEKKMLELHQKESCSQSPTL 400



>gb|BQ148856.1|BQ148856 NF083B11FL1F1092 Developing flower Medicago truncatula cDNA clone
           NF083B11FL 5', mRNA sequence
          Length = 669

 Score =  131 bits (281), Expect = 1e-029
 Identities = 52/89 (58%), Positives = 62/89 (69%)
 Frame = +3 / +2

                                                                       
Query: 3   VVNDPNLKWYESSWELLGNEYFMHASGSLYALSSEVVEALATAKSDSLRMFDYEDVTIGA 182
           V  DP LKWYE    LLG EYF+HA G +YALS++V  +L   +++S RMF  EDVTIGA
Sbjct: 401 VFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVXSSLVALRNNSFRMFSNEDVTIGA 580

                                        
Query: 183 WMLAMNVKHEDNRAMCDSVCTPTSIAVWD 269
           WMLAMNV HE+   +C   CT TSIA WD
Sbjct: 581 WMLAMNVNHENIHELCSXXCTSTSIAGWD 667



>gb|AJ499253.1|AJ499253 AJ499253 MTGIM Medicago truncatula cDNA clone mtgmacc120001h06,
           mRNA sequence
          Length = 473

 Score =  109 bits (232), Expect = 6e-023
 Identities = 42/75 (56%), Positives = 52/75 (69%)
 Frame = +3 / -3

                                                                       
Query: 132 KSDSLRMFDYEDVTIGAWMLAMNVKHEDNRAMCDSVCTPTSIAVWDSKKCSGTCNVADKI 311
           +++S RMF  EDVTIGAWMLAMNV HE+   +C   CT TSIAVWD  KCSG CN   ++
Sbjct: 468 RNNSFRMFSNEDVTIGAWMLAMNVNHENIHELCSPECTSTSIAVWDIPKCSGLCNPEKRM 289

                          
Query: 312 KQLHNTTVCSKSPTL 356
            +LH    C +SPT+
Sbjct: 288 LELHQMDSCIQSPTM 244



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 799,725,702
Number of Sequences: 392609
Number of extensions: 11435801
Number of successful extensions: 53239
Number of sequences better than 1.0e-020: 4
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 23570124215
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)