TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023585.2.1
(635 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cD... 194 2e-054
gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula c... 194 2e-054
gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula c... 194 2e-054
gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula c... 194 2e-054
gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula c... 194 2e-054
gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infect... 194 2e-054
gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infect... 194 2e-054
gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infect... 194 2e-054
gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infect... 194 2e-054
gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cD... 194 3e-054
gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infect... 194 3e-054
gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower M... 194 5e-054
gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cD... 194 5e-053
gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula... 194 9e-049
gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cD... 194 9e-049
gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula c... 194 9e-049
gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula c... 194 9e-049
gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infect... 194 9e-049
gb|CA921701.1|CA921701 EST639419 MTUS Medicago truncatula c... 104 4e-048
gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula... 191 1e-047
gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula c... 188 5e-047
gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula ... 126 1e-043
gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula c... 155 9e-043
gb|BG647362.1|BG647362 EST508981 HOGA Medicago truncatula c... 137 1e-031
gb|CB893026.1|CB893026 EST645818 HOGA Medicago truncatula c... 137 1e-031
gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORK... 79 2e-031
gb|AL389238.1|AL389238 MtBC53F04R1 MtBC Medicago truncatula... 137 2e-031
gb|BQ153766.1|BQ153766 NF046C12IR1F1097 Irradiated Medicago... 134 1e-030
gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved l... 120 3e-026
gb|BF634288.1|BF634288 NF082G02DT1F1019 Drought Medicago tr... 109 5e-023
gb|BF640885.1|BF640885 NF050D12IN1F1101 Insect herbivory Me... 106 4e-022
gb|AW329273.2|AW329273 N200493e rootphos(-) Medicago trunca... 105 5e-022
gb|BE249354.2|BE249354 NF014E10LF1F1082 Developing leaf Med... 105 5e-022
gb|BG647007.1|BG647007 EST508626 HOGA Medicago truncatula c... 105 5e-022
gb|BI266886.1|BI266886 NF094H07IN1F1064 Insect herbivory Me... 105 5e-022
gb|BQ124258.1|BQ124258 EST609834 GLSD Medicago truncatula c... 105 5e-022
gb|BQ750503.1|BQ750503 EST633239 KVKC Medicago truncatula c... 105 5e-022
gb|CB893980.1|CB893980 EST646772 HOGA Medicago truncatula c... 105 5e-022
gb|CA922986.1|CA922986 EST640704 MTUS Medicago truncatula c... 105 5e-022
gb|AL374004.1|AL374004 MtBB04B02F1 MtBB Medicago truncatula... 104 2e-021
gb|BF003223.1|BF003223 EST431771 KV1 Medicago truncatula cD... 104 2e-021
gb|BG582103.1|BG582103 EST483841 GVN Medicago truncatula cD... 103 3e-021
gb|BI311950.1|BI311950 EST5313700 GESD Medicago truncatula ... 103 3e-021
gb|CX542164.1|CX542164 s13dNF86A08GS055_467636 Germinating ... 103 3e-021
gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula c... 102 5e-021
>gb|CB892321.1|CB892321 EST649290 KV3 Medicago truncatula cDNA clone KV3-53J20, mRNA
sequence
Length = 852
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 222 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 401
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 402 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 497
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 457 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 278
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 277 AGRLVP*IPAWLQR*KSN 224
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 549 VRPLPALKDNVKKVMFYC* 605
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 604 QQ*NMTFLTLSFNAGRGLT 548
>gb|CA920840.1|CA920840 EST638558 MTUS Medicago truncatula cDNA clone MTUS-32A1, mRNA
sequence
Length = 743
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 590 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 411
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 410 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 315
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / +1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 355 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 534
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 535 AGRLVP*IPAWLQR*KSN 588
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 263 VRPLPALKDNVKKVMFYC* 207
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / +1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 208 QQ*NMTFLTLSFNAGRGLT 264
>gb|CA921380.1|CA921380 EST639098 MTUS Medicago truncatula cDNA clone MTUS-39F8, mRNA
sequence
Length = 736
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / -1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 730 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 551
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 550 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 455
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / +3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 495 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 674
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 675 AGRLVP*IPAWLQR*KSN 728
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 403 VRPLPALKDNVKKVMFYC* 347
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / +3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 348 QQ*NMTFLTLSFNAGRGLT 404
>gb|CA991416.1|CA991416 EST644924 GESD Medicago truncatula cDNA clone GESD-32N10, mRNA
sequence
Length = 657
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 130 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 309
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 310 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 405
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 365 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 186
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 185 AGRLVP*IPAWLQR*KSN 132
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 457 VRPLPALKDNVKKVMFYC* 513
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 512 QQ*NMTFLTLSFNAGRGLT 456
>gb|CA989739.1|CA989739 EST643247 GLSD Medicago truncatula cDNA clone pGLSD-42J7, mRNA
sequence
Length = 647
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 186 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 365
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 366 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 461
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 421 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 242
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 241 AGRLVP*IPAWLQR*KSN 188
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 513 VRPLPALKDNVKKVMFYC* 569
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 568 QQ*NMTFLTLSFNAGRGLT 512
>gb|CX518047.1|CX518047 s13dNF31D08VI074_421807 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 598
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 53 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 232
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 233 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 328
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 288 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 109
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 108 AGRLVP*IPAWLQR*KSN 55
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 380 VRPLPALKDNVKKVMFYC* 436
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CX518123.1|CX518123 s13dNF27D02VI014_421959 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 579
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 53 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 232
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 233 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 328
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 288 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 109
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 108 AGRLVP*IPAWLQR*KSN 55
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 380 VRPLPALKDNVKKVMFYC* 436
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CX521755.1|CX521755 s13dNF1SH04VI042_469314 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 545
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 53 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 232
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 233 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 328
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -3
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 288 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 109
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 108 AGRLVP*IPAWLQR*KSN 55
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 380 VRPLPALKDNVKKVMFYC* 436
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|CX522959.1|CX522959 s13dNF87A06VI049_471722 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 471
Score = 194 bits (419), Expect(2) = 2e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 53 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 232
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 233 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 328
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 288 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 109
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 108 AGRLVP*IPAWLQR*KSN 55
Score = 39.1 bits (79), Expect(2) = 2e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 380 VRPLPALKDNVKKVMFYC* 436
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 435 QQ*NMTFLTLSFNAGRGLT 379
>gb|BM779610.1|BM779610 EST590186 KV2 Medicago truncatula cDNA clone pKV2-52F5, mRNA
sequence
Length = 796
Score = 194 bits (419), Expect(2) = 3e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 359 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 538
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 539 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 634
Score = 92.3 bits (195), Expect(2) = 7e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 594 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 415
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 414 AGRLVP*IPAWLQR*KSN 361
Score = 38.6 bits (78), Expect(2) = 3e-054
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 686 VRPLPALKDHVKKVMFYC* 742
Score = 32.7 bits (65), Expect(2) = 7e-022
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T+SF AGRG T
Sbjct: 741 QQ*NMTFLTWSFNAGRGLT 685
>gb|CX517073.1|CX517073 s13dNF12C02VI018_398617 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 543
Score = 194 bits (419), Expect(2) = 3e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 163 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 342
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 343 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 438
Score = 92.3 bits (195), Expect(2) = 4e-021
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 398 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 219
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 218 AGRLVP*IPAWLQR*KSN 165
Score = 38.6 bits (78), Expect(2) = 3e-054
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1 / +1
Query: 280 VKPLPAVKEKVKRVMFYC 333
V+PLPA+K+ VK+VMFYC
Sbjct: 490 VRPLPALKDNVKKVMFYC 543
Score = 29.9 bits (59), Expect(2) = 4e-021
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 332 Q*NITLFTFSFTAGRGFT 279
Q*N+T T SF AGRG T
Sbjct: 542 Q*NMTFLTLSFNAGRGLT 489
>gb|BI271708.1|BI271708 NF011C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF011C12FL 5', mRNA sequence
Length = 691
Score = 194 bits (419), Expect(2) = 5e-054
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 192 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 371
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 372 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 467
Score = 92.3 bits (195), Expect(2) = 9e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -1 / -1
Query: 236 SDISGSMXXXXXXXXRCA*YAGGTTETERVHRA*V*QRLFVSVCISSAVKLFSSQRTW** 57
S++SGSM +CA*YAGGT ETERVH A V* RL V + SA+KLFSS T **
Sbjct: 427 SEVSGSM*NLALNAAKCA*YAGGTIETERVHLAYV*HRLLVKL*RPSALKLFSSHST*** 248
Query: 56 AGLLVPWIPA*LQR*KSN 3
AG LVP IPA LQR*KSN
Sbjct: 247 AGRLVP*IPAWLQR*KSN 194
Score = 37.7 bits (76), Expect(2) = 5e-054
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK VMFYC*
Sbjct: 519 VRPLPALKDNVKXVMFYC* 575
Score = 32.2 bits (64), Expect(2) = 9e-022
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 335 QQ*NITLFTFSFTAGRGFT 279
QQ*N+T T SF AGRG T
Sbjct: 574 QQ*NMTFLTLSFNAGRGLT 518
>gb|BE204926.1|BE204926 EST397546 KV0 Medicago truncatula cDNA clone pKV0-18L21, mRNA
sequence
Length = 603
Score = 194 bits (419), Expect(2) = 5e-053
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 225 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 404
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 405 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 500
Score = 34.5 bits (69), Expect(2) = 5e-053
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1 / +3
Query: 280 VKPLPAVKEKVKRVMFY 330
V+PLPA+K+ VK+VMFY
Sbjct: 552 VRPLPALKDNVKKVMFY 602
>gb|AL385609.1|AL385609 MtBC29E08F1 MtBC Medicago truncatula cDNA clone MtBC29E08 T3, mRNA
sequence
Length = 454
Score = 194 bits (419), Expect = 9e-049
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 176 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 355
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 356 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 451
>gb|BF003776.1|BF003776 EST432274 KV1 Medicago truncatula cDNA clone pKV1-13L5, mRNA
sequence
Length = 601
Score = 194 bits (419), Expect = 9e-049
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 305 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 484
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 485 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 580
>gb|AJ502254.1|AJ502254 AJ502254 MTAMP Medicago truncatula cDNA clone mtgmadc120018e05,
mRNA sequence
Length = 604
Score = 194 bits (419), Expect = 9e-049
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 249 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 428
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 429 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 524
>gb|CB892929.1|CB892929 EST645721 HOGA Medicago truncatula cDNA clone HOGA-26O13, mRNA
sequence
Length = 776
Score = 194 bits (419), Expect = 9e-049
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 490 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 669
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 670 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 765
>gb|CX520294.1|CX520294 s13dNF40A01VI001_444640 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 472
Score = 194 bits (419), Expect = 9e-049
Identities = 75/92 (81%), Positives = 83/92 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 111 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 290
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
YAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 291 YAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 386
>gb|CA921701.1|CA921701 EST639419 MTUS Medicago truncatula cDNA clone MTUS-43D7, mRNA
sequence
Length = 802
Score = 104 bits (221), Expect(3) = 4e-048
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +1 / -3
Query: 97 DEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSE 237
D +Q+LTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY EP++ E
Sbjct: 671 DGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPDLQE 531
Score = 82.6 bits (174), Expect(3) = 4e-048
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1 / -2
Query: 7 DFYLCSHAGIQGTSRPAHYHVLWDENNFTA 96
DFYLCSHAGIQGTSRPAHYHVLWDENNFTA
Sbjct: 762 DFYLCSHAGIQGTSRPAHYHVLWDENNFTA 673
Score = 44.6 bits (91), Expect(3) = 4e-048
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / -3
Query: 247 SKSSNGTNGGLVKPLPAVKEKVKRVMFYC* 336
SK++ VKPLPA+KE VKRVMFYC*
Sbjct: 506 SKTTRAAGDCGVKPLPALKENVKRVMFYC* 417
>gb|AL388861.1|AL388861 MtBC51C02F1 MtBC Medicago truncatula cDNA clone MtBC51C02 T3, mRNA
sequence
Length = 491
Score = 191 bits (411), Expect = 1e-047
Identities = 73/85 (85%), Positives = 80/85 (94%)
Frame = +1 / +2
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAY
Sbjct: 176 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAY 355
Query: 181 YAHLAAFRARFYMEPEMSENQTSKS 255
YAHLAAFRARFYMEPE S++ + S
Sbjct: 356 YAHLAAFRARFYMEPETSDSGSMTS 430
>gb|BG648445.1|BG648445 EST510064 HOGA Medicago truncatula cDNA clone pHOGA-19F10 5' end,
mRNA sequence
Length = 832
Score = 188 bits (406), Expect = 5e-047
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSV +VPPAY
Sbjct: 567 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVFIVPPAY 746
Query: 181 YAHLAAFRARFYMEPEMSENQTSKSSNG 264
YAHLAAF+ARFYMEPE S++ + S G
Sbjct: 747 YAHLAAFKARFYMEPETSDSGSMTSGAG 830
>gb|BI312109.1|BI312109 EST5313859 GESD Medicago truncatula cDNA clone pGESD17C13 5' end,
mRNA sequence
Length = 741
Score = 126 bits (269), Expect(2) = 1e-043
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCT 150
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCT
Sbjct: 442 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCT 591
Score = 71.6 bits (150), Expect(2) = 1e-043
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +1 / +2
Query: 151 RSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
RSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 593 RSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 718
>gb|CB894497.1|CB894497 EST647289 HOGA Medicago truncatula cDNA clone HOGA-31K16, mRNA
sequence
Length = 623
Score = 155 bits (334), Expect(2) = 9e-043
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +1 / +2
Query: 46 SRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEP 225
SRPAHYHVLWDENNF+AD +Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP
Sbjct: 2 SRPAHYHVLWDENNFSADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 181
Query: 226 EMSENQTSKSSNGTNGG 276
E S++ + S + GG
Sbjct: 182 ETSDSGSMTSGAVSRGG 232
Score = 39.1 bits (79), Expect(2) = 9e-043
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1 / +2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+K+ VK+VMFYC*
Sbjct: 284 VRPLPALKDNVKKVMFYC* 340
>gb|BG647362.1|BG647362 EST508981 HOGA Medicago truncatula cDNA clone pHOGA-16N9 5' end,
mRNA sequence
Length = 778
Score = 137 bits (294), Expect = 1e-031
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G GTS+P HYHVLWDE+ FT+D +Q L ++C+T+ARCT+ VS+VPP Y
Sbjct: 229 EFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLQKLIYDMCFTFARCTKPVSLVPPVY 408
Query: 181 YAHLAAFRARFYMEPEMS 234
YA LAA+R R Y E +MS
Sbjct: 409 YADLAAYRGRLYYEAKMS 462
>gb|CB893026.1|CB893026 EST645818 HOGA Medicago truncatula cDNA clone HOGA-26D21, mRNA
sequence
Length = 842
Score = 137 bits (294), Expect = 1e-031
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G GTS+P HYHVLWDE+ FT+D +Q L ++C+T+ARCT+ VS+VPP Y
Sbjct: 441 EFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLQKLIYDMCFTFARCTKPVSLVPPVY 620
Query: 181 YAHLAAFRARFYMEPEMS 234
YA LAA+R R Y E +MS
Sbjct: 621 YADLAAYRGRLYYEAKMS 674
>gb|AC160838.12| Medicago truncatula clone mth2-158e24, WORKING DRAFT SEQUENCE, 4
ordered pieces
Length = 120311
Score = 78.5 bits (165), Expect(4) = 2e-031
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = +1 / -3
Query: 37 QGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
QGTS+PAHYHV+WD+N F+ADE+Q+LTNNLCYT S + YY
Sbjct: 40548 QGTSKPAHYHVIWDDNKFSADEIQSLTNNLCYT*INSILSYQIFLHYYY 40402
Score = 59.3 bits (123), Expect(4) = 2e-031
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1 / -2
Query: 166 VPPAYYAHLAAFRARFYMEPEMSENQTSK 252
VPPAYYAHLAA+RARFYMEP++ EN S+
Sbjct: 40177 VPPAYYAHLAAYRARFYMEPDVHENAKSQ 40091
Score = 42.8 bits (87), Expect(4) = 2e-031
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1 / -2
Query: 280 VKPLPAVKEKVKRVMFYC* 336
V+PLPA+KEKVK+VMFYC*
Sbjct: 40066 VRPLPALKEKVKKVMFYC* 40010
Score = 36.3 bits (73), Expect(4) = 2e-031
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / -2
Query: 1 EFDFYLCSHAGIQ 39
EFDFYLCSHAG+Q
Sbjct: 40657 EFDFYLCSHAGVQ 40619
>gb|AL389238.1|AL389238 MtBC53F04R1 MtBC Medicago truncatula cDNA clone MtBC53F04 T7, mRNA
sequence
Length = 549
Score = 137 bits (293), Expect = 2e-031
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYL SH G+QGTSRP HYHVL DEN F +D +QTL+ NLCY +ARCTR+VS+VPP Y
Sbjct: 61 EFDFYLQSHPGLQGTSRPTHYHVLLDENGFNSDSLQTLSYNLCYVFARCTRAVSLVPPVY 240
Query: 181 YAHLAAFRARFYMEPE 228
YAHL RARF+ E
Sbjct: 241 YAHLVCARARFHSSGE 288
>gb|BQ153766.1|BQ153766 NF046C12IR1F1097 Irradiated Medicago truncatula cDNA clone
NF046C12IR 5', mRNA sequence
Length = 578
Score = 134 bits (287), Expect = 1e-030
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAY 180
EFDFYLCSH G GTS+P HYHVLWDE+ FT+D + L ++C+T+ARCT+ VS+VPP Y
Sbjct: 255 EFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDNLXKLIYDMCFTFARCTKPVSLVPPVY 434
Query: 181 YAHLAAFRARFYMEPEMS 234
YA LAA+R R Y E +MS
Sbjct: 435 YADLAAYRGRLYYEXKMS 488
>gb|BG456918.1|BG456918 NF099B09PL1F1075 Phosphate starved leaf Medicago truncatula cDNA
clone NF099B09PL 5', mRNA sequence
Length = 683
Score = 120 bits (256), Expect = 3e-026
Identities = 45/50 (90%), Positives = 48/50 (96%)
Frame = +1 / +3
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCT 150
EFDFYLCSHAGIQGTSRPAHYHVL DENNF+AD +Q+LTNNLCYTYARCT
Sbjct: 525 EFDFYLCSHAGIQGTSRPAHYHVLXDENNFSADGLQSLTNNLCYTYARCT 674
>gb|BF634288.1|BF634288 NF082G02DT1F1019 Drought Medicago truncatula cDNA clone NF082G02DT
5', mRNA sequence
Length = 175
Score = 109 bits (232), Expect = 5e-023
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +2
Query: 106 QTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQTSKSSNGTNGG 276
Q+LTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEPE S++ + S + GG
Sbjct: 2 QSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVSRGG 172
>gb|BF640885.1|BF640885 NF050D12IN1F1101 Insect herbivory Medicago truncatula cDNA clone
NF050D12IN 5', mRNA sequence
Length = 677
Score = 106 bits (226), Expect = 4e-022
Identities = 45/93 (48%), Positives = 59/93 (63%)
Frame = +1 / +1
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFYLC+HAG+ GTSRP HYHVL DE F+ DE+Q L ++L Y Y R T ++SVV P Y
Sbjct: 328 YDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICY 507
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLV 282
AHLAA + +M+ E +S + G V
Sbjct: 508 AHLAATQLGQFMKFEDKSETSSSHGGLSAAGAV 606
>gb|AW329273.2|AW329273 N200493e rootphos(-) Medicago truncatula cDNA clone MHRP-18C1, mRNA
sequence
Length = 588
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 146 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 325
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 326 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 463
>gb|BE249354.2|BE249354 NF014E10LF1F1082 Developing leaf Medicago truncatula cDNA clone
NF014E10LF 5', mRNA sequence
Length = 646
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +1
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 109 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 288
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 289 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 426
>gb|BG647007.1|BG647007 EST508626 HOGA Medicago truncatula cDNA clone pHOGA-15M6 5' end,
mRNA sequence
Length = 616
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 156 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 335
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 336 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 473
>gb|BI266886.1|BI266886 NF094H07IN1F1064 Insect herbivory Medicago truncatula cDNA clone
NF094H07IN 5', mRNA sequence
Length = 642
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 204 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 383
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 384 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 521
>gb|BQ124258.1|BQ124258 EST609834 GLSD Medicago truncatula cDNA clone pGLSD-34D22, mRNA
sequence
Length = 722
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 158 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 337
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 338 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 475
>gb|BQ750503.1|BQ750503 EST633239 KVKC Medicago truncatula cDNA, mRNA sequence
Length = 783
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / -3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 649 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 470
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 469 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 332
>gb|CB893980.1|CB893980 EST646772 HOGA Medicago truncatula cDNA clone HOGA-29L17, mRNA
sequence
Length = 794
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 182 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 361
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 362 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 499
>gb|CA922986.1|CA922986 EST640704 MTUS Medicago truncatula cDNA clone MTUS-61C12, mRNA
sequence
Length = 786
Score = 105 bits (225), Expect = 5e-022
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1 / -2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 653 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 474
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLPAVKEKVKRV 321
AHLAA + +M+ E +S P+P + + + V
Sbjct: 473 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDSV 336
>gb|AL374004.1|AL374004 MtBB04B02F1 MtBB Medicago truncatula cDNA clone MtBB04B02 T3, mRNA
sequence
Length = 492
Score = 104 bits (221), Expect = 2e-021
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = +1 / +1
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 187 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 366
Query: 184 AHLAAFRARFYMEPEMSENQTSKSSNGTNGGLVKPLP 294
AHLAA + +M+ E +S P+P
Sbjct: 367 AHLAASQVGQFMKFEDKSETSSSHGGSGRDINGSPIP 477
>gb|BF003223.1|BF003223 EST431771 KV1 Medicago truncatula cDNA clone pKV1-3E1, mRNA
sequence
Length = 397
Score = 104 bits (221), Expect = 2e-021
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = +1 / +1
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFYLC+HAG+ GTSRP HYHVL DE F+ DE+Q L ++L Y Y R T ++SVV P Y
Sbjct: 178 YDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICY 357
Query: 184 AHLAAFRARFYME 222
AHLAA + +M+
Sbjct: 358 AHLAATQLGQFMK 396
>gb|BG582103.1|BG582103 EST483841 GVN Medicago truncatula cDNA clone pGVN-66B2 5' end, mRNA
sequence
Length = 830
Score = 103 bits (219), Expect = 3e-021
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 449 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 628
Query: 184 AHLAAFRARFYMEPEMSENQTS 249
AHLAA + +M+ E +S
Sbjct: 629 AHLAASQVGQFMKFEDKSETSS 694
>gb|BI311950.1|BI311950 EST5313700 GESD Medicago truncatula cDNA clone pGESD16D7 5' end,
mRNA sequence
Length = 592
Score = 103 bits (219), Expect = 3e-021
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +1 / +3
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFY+C+HAG+ GTSRP HYHVL DE F+ D++Q L ++L Y Y R T ++SVV P Y
Sbjct: 36 YDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 215
Query: 184 AHLAAFRARFYMEPEMSENQTS 249
AHLAA + +M+ E +S
Sbjct: 216 AHLAASQVGQFMKFEDKSETSS 281
>gb|CX542164.1|CX542164 s13dNF86A08GS055_467636 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 564
Score = 103 bits (219), Expect = 3e-021
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +1 / +2
Query: 4 FDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYY 183
+DFYLC+HAG+ GTSRP HYHVL DE F+ DE+Q L ++L Y Y R T ++SVV P Y
Sbjct: 365 YDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICY 544
Query: 184 AHLAA 198
AHLAA
Sbjct: 545 AHLAA 559
>gb|CB895213.1|CB895213 EST648005 HOGA Medicago truncatula cDNA clone HOGA-33N16, mRNA
sequence
Length = 892
Score = 102 bits (218), Expect = 5e-021
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +1 / +1
Query: 1 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNL 126
EFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +Q+LTNNL
Sbjct: 766 EFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQSLTNNL 891
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 666,048,578
Number of Sequences: 392609
Number of extensions: 9287762
Number of successful extensions: 60506
Number of sequences better than 1.0e-020: 50
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19788820865
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)