TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012883.2.1
(1189 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW687013.2|AW687013 NF005A06RT1F1040 Developing root Med... 299 7e-080
gb|AC175090.3| Medicago truncatula clone mth2-156c19, WORKI... 286 7e-076
gb|CA923127.1|CA923127 EST640845 MTUS Medicago truncatula c... 264 3e-069
gb|BG448658.1|BG448658 NF045F11NR1F1092 Nodulated root Medi... 244 3e-066
emb|CR317086.1| mte1-41M22FM1 BAC end, cultivar Jemalong A1... 235 2e-064
emb|CR300646.1| mte1-19G21RM1 BAC end, cultivar Jemalong A1... 245 1e-063
gb|BF519709.1|BF519709 EST457173 DSIL Medicago truncatula c... 233 3e-060
emb|CR314565.1| mte1-38E22RM1 BAC end, cultivar Jemalong A1... 221 2e-056
emb|CR315137.1| mte1-39C6RM1 BAC end, cultivar Jemalong A17... 221 3e-056
gb|CG973490.1|CG973490 MBEKJ65TF mth2 Medicago truncatula g... 174 2e-054
gb|AW687606.2|AW687606 NF011D11RT1F1093 Developing root Med... 205 9e-052
gb|BE319809.2|BE319809 NF022C06RT1F1038 Developing root Med... 200 3e-050
gb|BG452222.1|BG452222 NF085B03LF1F1029 Developing leaf Med... 172 1e-048
gb|BE320472.2|BE320472 NF031B04RT1F1029 Developing root Med... 176 8e-043
emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2... 85 2e-040
gb|BE319936.2|BE319936 NF021D10RT1F1078 Developing root Med... 166 9e-040
emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2... 157 3e-037
gb|BF633520.1|BF633520 NF056B08DT1F1073 Drought Medicago tr... 155 3e-037
gb|BF648296.1|BF648296 NF044C10EC1F1081 Elicited cell cultu... 154 6e-037
gb|BI263433.1|BI263433 NF087C04PL1F1034 Phosphate starved l... 151 5e-036
gb|CA921399.1|CA921399 EST639117 MTUS Medicago truncatula c... 152 1e-035
gb|BE319553.2|BE319553 NF015A06RT1F1037 Developing root Med... 146 6e-034
gb|AL383572.1|AL383572 MtBC15C03F1 MtBC Medicago truncatula... 143 7e-033
gb|CL314551.1|CL314551 mth2-131P23_OP Medicago truncatula B... 119 1e-031
gb|BQ139747.1|BQ139747 NF023H06PH1F1059 Phoma-infected Medi... 121 3e-026
gb|BF646447.1|BF646447 NF075C12EC1F1097 Elicited cell cultu... 116 7e-025
gb|BF645784.1|BF645784 NF017E08EC1F1066 Elicited cell cultu... 113 5e-024
gb|BE319473.2|BE319473 NF019A06RT1F1037 Developing root Med... 93 5e-023
gb|BF646416.1|BF646416 NF071D06EC1F1057 Elicited cell cultu... 109 8e-023
gb|BE325413.2|BE325413 NF088F11ST1F1091 Developing stem Med... 90 2e-022
gb|AJ496927.1|AJ496927 AJ496927 MTFLOW Medicago truncatula ... 106 8e-022
gb|AJ497868.1|AJ497868 AJ497868 MTFLOW Medicago truncatula ... 104 4e-021
emb|CR298951.1| mte1-16P11FM1 BAC end, cultivar Jemalong A1... 52 6e-021
emb|CR295686.1| mte1-12G7FM1 BAC end, cultivar Jemalong A17... 52 8e-021
>gb|AW687013.2|AW687013 NF005A06RT1F1040 Developing root Medicago truncatula cDNA clone
NF005A06RT 5', mRNA sequence
Length = 772
Score = 299 bits (647), Expect = 7e-080
Identities = 124/220 (56%), Positives = 164/220 (74%)
Frame = +1 / +2
Query: 271 KLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCG 450
+L ANEES VTKAS+MKAIK+RMEKDIDEVGKIA K K++ + R+NL+NRQKPGC
Sbjct: 113 RLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGCE 292
Query: 451 KGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETID 630
KG+ +DR+R T ++ KK ++ M +FQTLR+ I+ TVTG RPD+ETID
Sbjct: 293 KGTGIDRARMNMTNSLTKKFRDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETID 472
Query: 631 DLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVE 810
LIETG SEQIF+ AI GRGQ++ TV EIQERHDAV+++E+KLL+L QI++DMAVLVE
Sbjct: 473 HLIETGNSEQIFQQAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVE 652
Query: 811 AQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKW 930
AQG++++NIE+ V+NA +H+Q+G +AL + KW
Sbjct: 653 AQGEILDNIESQVNNAVDHVQRGTTALSKC*ETPEEFSKW 772
Score = 201 bits (434), Expect = 2e-050
Identities = 112/209 (53%), Positives = 123/209 (58%)
Frame = -3 / -2
Query: 896 FWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCIS 717
F SA+ P A TW+SML +SP AST TAMS I C SRSF S S TASC S IS
Sbjct: 738 FESAVVPLWT*STALLTWLSMLSKISP*ASTNTAMSR*I*CKSRSFFSISFTASCLS*IS 559
Query: 716 ATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLK 537
+TV + P P IA ICSLFP SG +PVTV TLLSTTSRYS I L+
Sbjct: 558 STVLTTCPRPASRIACWKICSLFPVSIRWSIVSSSGLVPVTVITLLSTTSRYSSCILCLR 379
Query: 536 V*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSS 357
V S +RS NF V+ L S PF PGFCL R SL +S F AIFPTSS
Sbjct: 378 VWNSVMRSLNFLVNEFVIFILALSIPVPFSQPGFCLLFRFSLLIASIFALTPCAIFPTSS 199
Query: 356 ISFSIRCLIAFMELAFVTXXDSSFAVWSL 270
ISFSI LIAFM AFVT DSS A +SL
Sbjct: 198 ISFSILFLIAFMADAFVTAFDSSLASFSL 112
Score = 65.7 bits (137), Expect(3) = 3e-022
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = -2 / -1
Query: 468 VHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFL 289
V+ +L T+R L I + S FC N P+FINI HPL + FHG CFCN FL
Sbjct: 310 VNTSSLLTARLLSIVQIFSIDSFYFCFDPMCNLPNFINILFHPLFDSFHGRCFCNSF*FL 131
Query: 288 I 286
I
Sbjct: 130 I 128
Score = 53.3 bits (110), Expect(3) = 3e-022
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = -2 / -1
Query: 744 YSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLS 565
+SIMSLL F S L+S+ + + E LLT S YQV+N L I + + N S NL+
Sbjct: 586 HSIMSLLNFFYSAHDLSSACFKNCLLEDLLTVSSFYQVVNRLIIWSSSRNCNNSSLHNLT 407
Query: 564 ILLPDCFSQGLKIIH 520
I + S+ L+ H
Sbjct: 406 IFILYSLSESLEFCH 362
Score = 25.8 bits (50), Expect(3) = 3e-022
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 873 LYVVGGVRDMGLDVVDHVSLRLNKNCHV 790
L ++ + D+ DVV + SL N +CHV
Sbjct: 715 LDMIDCIVDLAFDVV*NFSLSFN*HCHV 632
>gb|AC175090.3| Medicago truncatula clone mth2-156c19, WORKING DRAFT SEQUENCE, 16
ordered pieces
Length = 138337
Score = 286 bits (618), Expect = 7e-076
Identities = 117/247 (47%), Positives = 168/247 (68%)
Frame = +1 / +1
Query: 199 NLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIA 378
NL F + V+ I+ + + L KL ANEES V A +MK ++ RM+KD+++V K
Sbjct: 91177 NLDKFFEDVENIKEDMKTIEQLYRKLKEANEESKTVHNAKTMKELRARMDKDVEQVLKRV 91356
Query: 379 PQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
K K++ L+R N +NR PGCG GS+ DR+R + KKLK+ MDDFQ LR ++
Sbjct: 91357 KIIKGKLEALDRSNAANRNIPGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQGLRARMQL 91536
Query: 559 XXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHD 738
FT+TG + DEETI++LI +G+SE + AIQ QGRGQI+DT++EIQERHD
Sbjct: 91537 EYKETVERRYFTITGEKADEETIENLISSGESENFMQRAIQEQGRGQIMDTISEIQERHD 91716
Query: 739 AVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRN 918
AV+++E+ L+EL Q+F+DMA LVE+QG +NNIE+HV++A++ +++G LQ A+ Q+N
Sbjct: 91717 AVKEIEKNLIELHQVFLDMATLVESQGQQLNNIESHVAHASSFVRRGTEQLQEARVQQKN 91896
Query: 919 SRKWMCY 939
SRKW CY
Sbjct: 91897 SRKWTCY 91917
Score = 106 bits (227), Expect = 6e-022
Identities = 67/142 (47%), Positives = 74/142 (52%)
Frame = -3 / -3
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF C A S P +A TW+S+LL P ST+ A+S N CNS F S S
Sbjct: 91904 FLEFFCCTLAS*SCSVPLLTKELACATWLSILLSCCP*DSTKVAISKNT*CNSIKFFSIS 91725
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASC S IS VS I PLP IA SL P S PV VK L ST S
Sbjct: 91724 LTASCLS*ISEIVSII*PLPCS*IALCMKFSLSPLDIKFSIVSSSAFSPVIVKYLRSTVS 91545
Query: 566 RYSCLIASLKV*KSSIRSFNFF 501
YS I +LK *KSSI S +FF
Sbjct: 91544 LYSSCILALKP*KSSIISLSFF 91479
>gb|CA923127.1|CA923127 EST640845 MTUS Medicago truncatula cDNA clone MTUS-63D3, mRNA
sequence
Length = 769
Score = 264 bits (570), Expect = 3e-069
Identities = 113/162 (69%), Positives = 135/162 (83%)
Frame = +1 / -2
Query: 451 KGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETID 630
KGSAVDRSR TT A+KKKLKE+M +FQ LREAI + FTVTG R DEETID
Sbjct: 747 KGSAVDRSRTATTIALKKKLKEKMAEFQILREAIHEEYREVVERRVFTVTGARADEETID 568
Query: 631 DLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVE 810
LIETG SEQIF+ AIQ QGRGQ++DT+AEIQERH+AVRD+ERKLL+LQQ FMD+AVLV+
Sbjct: 567 RLIETGDSEQIFQKAIQEQGRGQVMDTLAEIQERHEAVRDVERKLLDLQQTFMDIAVLVD 388
Query: 811 AQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
AQGDM++NIE+ VS+A +H+QQG ++LQ AKK+QRNSRKWMC
Sbjct: 387 AQGDMLDNIESQVSSAVDHVQQGNNSLQKAKKMQRNSRKWMC 262
Score = 206 bits (445), Expect = 5e-052
Identities = 97/159 (61%), Positives = 107/159 (67%)
Frame = -3 / +2
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEFLC FFAFW L PCC A ET SML MSPCAST TA+S+N+CC S +FLS S
Sbjct: 272 FLEFLCIFFAFWRELFPCCT*STALETCDSMLSSMSPCASTNTAISINVCCKSSNFLSTS 451
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRS ISA VS WP P IA ICSL P S PVTV T LSTTS
Sbjct: 452 LTASCRS*ISARVSITWPRPCS*IAFWKICSLSPVSINLSIVSSSALAPVTVNTRLSTTS 631
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPF 450
RYS +ASL++* S+I SF+FFF A VV LDRSTA+PF
Sbjct: 632 RYSSWMASLRI*NSAIFSFSFFFKAIVVAVLDRSTADPF 748
>gb|BG448658.1|BG448658 NF045F11NR1F1092 Nodulated root Medicago truncatula cDNA clone
NF045F11NR 5', mRNA sequence
Length = 667
Score = 244 bits (528), Expect(2) = 3e-066
Identities = 111/174 (63%), Positives = 129/174 (74%)
Frame = +1 / +1
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
L F KKV +E KL NLL KL A+EE+ VTKA +MKAIKQRMEKD+DEV K A
Sbjct: 145 LDSFFKKVQELEKQYVKLDNLLRKLQDAHEETKAVTKAPAMKAIKQRMEKDVDEVKKTAY 324
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQX 561
KTKV+EL+++NL+NRQKP CGKGSAVDRSR TT A+KKKLKE+M +FQ LREAI +
Sbjct: 325 FLKTKVEELDKENLANRQKPACGKGSAVDRSRTATTIALKKKLKEKMAEFQILREAIHEE 504
Query: 562 XXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEI 723
FTVTG R DEETID LIETG SEQIF+ AIQ QGR Q++DT+AEI
Sbjct: 505 YREVVERRVFTVTGARADEETIDRLIETGDSEQIFQKAIQEQGRXQVMDTLAEI 666
Score = 183 bits (395), Expect = 4e-045
Identities = 95/174 (54%), Positives = 105/174 (60%)
Frame = -3 / -3
Query: 722 ISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIAS 543
ISA VS W P IA ICSL P S PVTV T LSTTSRYS +AS
Sbjct: 665 ISARVSITWXRPCS*IAFWKICSLSPVSINLSIVSSSALAPVTVNTRLSTTSRYSSWMAS 486
Query: 542 LKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPT 363
L++* S+I SF+FFF A VV LDRSTA+PFP GFCL + SLSSSST VF A+F T
Sbjct: 485 LRI*NSAIFSFSFFFKAIVVAVLDRSTADPFPQAGFCLLAKFSLSSSSTLVFKKYAVFLT 306
Query: 362 SSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFK 201
SS SFSI C IAFM A VT SS+A WS R SF S + TF KK K
Sbjct: 305 SSTSFSILCFIAFMAGALVTALVSSWASWSFLKRLSSFTYCFSSS*TFLKKLSK 144
Score = 72.1 bits (151), Expect(2) = 6e-025
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = -2 / -2
Query: 720 FSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFS 541
F V YLASSL L+S+ E L +GL +NCL I + Y K S +NL+I D FS
Sbjct: 663 FC*GVHYLASSLFLNSLLENLFAVTGLN*SVNCLLISSRAGYCKYASLNNLTIFFMDGFS 484
Query: 540 QGLKIIHPFLQFLF 499
Q LK H LQFLF
Sbjct: 483 QDLKFSHLLLQFLF 442
Score = 64.3 bits (134), Expect(2) = 6e-025
Identities = 35/89 (39%), Positives = 48/89 (53%)
Frame = -2 / -2
Query: 468 VHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFL 289
V+ R+ STSR LPI ++ Q NF L +F +FINI LH LL HG F + G L
Sbjct: 411 VNSRSFSTSRLLPISQILFVQLFNFGL*EICSFLNFINILLHSLLYSLHGRSFGHSLGLL 232
Query: 288 ICSXELIQ*I*QLCNYTLNCIDLLQEIFQ 202
+ EL Q + +L L ++L +E Q
Sbjct: 231 MGILELSQKVIELHILFLKLLNLFEETIQ 145
Score = 29.9 bits (59), Expect(2) = 3e-066
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 100 MNNLLTDSFELPRRDSSRDADI 165
MN+LLT+SFE+PR D ++
Sbjct: 46 MNDLLTESFEIPRGRGGGDIEL 111
>emb|CR317086.1| mte1-41M22FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 917
Score = 235 bits (507), Expect(2) = 2e-064
Identities = 100/212 (47%), Positives = 141/212 (66%)
Frame = +1 / +3
Query: 193 SDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGK 372
S NL F + V+ ++ + + L KL ANEES V A +MK ++ RM+KD+++V K
Sbjct: 204 SINLDKFFEDVENVKEDMRLVEKLYRKLQEANEESKIVHNAKTMKDLRARMDKDVEQVLK 383
Query: 373 IAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAI 552
K K++ LER N +NR PGCG GS+ DR+R + KKLK+ MDDFQ LR +
Sbjct: 384 RVKIIKGKLEALERSNAANRNIPGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQGLRARM 563
Query: 553 RQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQER 732
+Q FT+TG + DE+TI++LI +G+SE + AIQ QGRGQI+DT++EIQER
Sbjct: 564 QQEYKETIERRYFTITGEKADEDTIENLISSGESETFMQRAIQEQGRGQIMDTISEIQER 743
Query: 733 HDAVRDLERKLLELQQIFMDMAVLVEAQGDMI 828
HDAV+++E+ L+EL Q+F+DMA LVE+QG I
Sbjct: 744 HDAVKEIEKNLIELHQVFLDMAALVESQGQQI 839
Score = 125 bits (267), Expect = 2e-027
Identities = 82/182 (45%), Positives = 90/182 (49%)
Frame = -3 / -2
Query: 827 IMSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLF 648
I PC ST AMS N CNS F S SLTASC S IS VS I PLP IA SL
Sbjct: 838 ICCPCDSTSAAMSKNT*CNSIKFFSISLTASCLS*ISDIVSII*PLPCS*IALCIKVSLS 659
Query: 647 PXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDR 468
P S PV VK LLS S YSC I +L *KSSI S +FF L
Sbjct: 658 PLDIKFSIVSSSAFSPVIVKYLLSIVSLYSCCILALNP*KSSIISLSFFPNPLTTEVLVL 479
Query: 467 STAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSS 288
S EP PHPG LF S++S+ + T S S SI L +F+ LA T SS
Sbjct: 478 SADEPGPHPGMFLFAAFERSNASSLPLMILTLLRTCSTSLSILALRSFIVLALWTILLSS 299
Query: 287 FA 282
FA
Sbjct: 298 FA 293
Score = 33.1 bits (66), Expect(2) = 2e-064
Identities = 11/34 (32%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 802 LVEAQGDMINNIETHVSNATNHIQQGVSALQNAK 903
L+ + + +NNIE+HV++A++ +++G L A+
Sbjct: 814 LLSHKDNKLNNIESHVAHASSFVRRGTEQLHEAR 915
>emb|CR300646.1| mte1-19G21RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 650
Score = 245 bits (529), Expect = 1e-063
Identities = 99/210 (47%), Positives = 147/210 (70%)
Frame = +1 / -2
Query: 289 EESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVD 468
++S V A +MK ++ RM+KD+++V K K K++ L+R N +NR PGCG GS+ D
Sbjct: 631 KKSKTVHNAKTMKELRARMDKDVEQVLKRVKIIKGKLEALDRSNAANRNIPGCGPGSSAD 452
Query: 469 RSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETG 648
R+R + KKLK+ MDDFQ LR ++ FT+TG + DEETI++LI +G
Sbjct: 451 RTRTSVVSGLGKKLKDMMDDFQGLRARMQLEYKETVERRYFTITGEKADEETIENLISSG 272
Query: 649 KSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMI 828
+SE + AIQ QGRGQI+DT++EIQERHDAV+++E+ L+EL Q+F+DMA LVE+QG +
Sbjct: 271 ESENFMQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMATLVESQGQQL 92
Query: 829 NNIETHVSNATNHIQQGVSALQNAKKLQRN 918
NNIE+HV++A++ +++G LQ A+ Q+N
Sbjct: 91 NNIESHVAHASSFVRRGTEQLQEARVQQKN 2
>gb|BF519709.1|BF519709 EST457173 DSIL Medicago truncatula cDNA clone pDSIL-21B11, mRNA
sequence
Length = 657
Score = 233 bits (504), Expect = 3e-060
Identities = 95/217 (43%), Positives = 142/217 (65%)
Frame = +1 / -2
Query: 286 NEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAV 465
+E S + A ++K I+ +M+ D+ K A K +++ L+R N ++R PG G GS+
Sbjct: 656 HERSKTLHSAKAVKDIRSKMDADVALALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSS 477
Query: 466 DRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIET 645
DR+R ++KKLK+ MD F LR+ I +TVTG PD++T+D LI T
Sbjct: 476 DRTRTSVVSGLRKKLKDSMDSFNNLRQQISSEYRETVQRRYYTVTGENPDDKTVDLLIST 297
Query: 646 GKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDM 825
G+SE + AIQ QGR I+DT+ EIQERHD V+++ER L+EL Q+FMDM+VLV++QG+
Sbjct: 296 GESETFLQKAIQQQGRANIMDTIQEIQERHDTVKEIERNLMELHQVFMDMSVLVQSQGEQ 117
Query: 826 INNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
++NIE+HV+ A ++++ GV L A+K Q N+RKW C
Sbjct: 116 LDNIESHVARANSYVRGGVQQLHVARKHQMNTRKWTC 6
Score = 119 bits (254), Expect = 1e-025
Identities = 80/205 (39%), Positives = 99/205 (48%)
Frame = -3 / +1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FL F+ F A + TP + +A TW+S+L SPC T+T MS+N +S FLS S
Sbjct: 16 FLVFIWCFLATCNCWTPPLTYELARATWLSILSNCSPCD*TKTDMSINTW*SSIRFLSIS 195
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
T SC S IS VS ++ LP CWIA SL P SG PVTV L T S
Sbjct: 196 FTVSCLS*ISWIVSMMFALPCCWIAFCKNVSLSPVEMRRSTVLSSGFSPVTV*YLRCTVS 375
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVF 387
YS I L++ K S+ S +FF L RS EP P PG L L SS+S+
Sbjct: 376 LYSEDICCLRLLKLSMESLSFFLKPLTTDVLVRSEDEPGPAPGKLLLASLDRSSASSRSL 555
Query: 386 A*GAIFPTSSISFSIRCLIAFMELA 312
A + S SI I+F A
Sbjct: 556 TSLAFLRAKATSASILERISFTAFA 630
>emb|CR314565.1| mte1-38E22RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 580
Score = 221 bits (477), Expect = 2e-056
Identities = 88/179 (49%), Positives = 129/179 (72%)
Frame = +1 / -3
Query: 343 MEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERM 522
M+KD+++V K K K++ L+R N +NR PGCG GS+ DR+R + KKLK+ M
Sbjct: 578 MDKDVEQVLKRVKIIKGKLEALDRSNAANRNIPGCGPGSSADRTRTSVVSGLGKKLKDMM 399
Query: 523 DDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQI 702
DDFQ LR ++ FT+TG + DEETI++LI +G+SE + AIQ QGRGQI
Sbjct: 398 DDFQGLRARMQLEYKETVERRYFTITGEKADEETIENLISSGESENFMQRAIQEQGRGQI 219
Query: 703 LDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQG 879
+DT++EIQERHDAV+++E+ L+EL Q+F+DMA LVE+QG +NNIE+HV++A++ +++G
Sbjct: 218 MDTISEIQERHDAVKEIEKNLIELHQVFLDMATLVESQGQQLNNIESHVAHASSFVRRG 42
>emb|CR315137.1| mte1-39C6RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 633
Score = 221 bits (476), Expect = 3e-056
Identities = 89/198 (44%), Positives = 135/198 (68%)
Frame = +1 / -3
Query: 325 KAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKK 504
K + K +++ ++ K K++ L+R N +NR PGCG GS+ DR+R + K
Sbjct: 595 KNFEHEWTKMLNKSLNVSKIIKGKLEALDRSNAANRNIPGCGPGSSADRTRTSVVSGLGK 416
Query: 505 KLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQH 684
KLK+ MDDFQ LR ++ FT+TG + DEETI++LI +G+SE + AIQ
Sbjct: 415 KLKDMMDDFQGLRARMQLEYKETVERRYFTITGEKADEETIENLISSGESENFMQRAIQE 236
Query: 685 QGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATN 864
QGRGQI+DT++EIQERHDAV+++E+ L+EL Q+F+DMA LVE+QG +NNIE+HV++A++
Sbjct: 235 QGRGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMATLVESQGQQLNNIESHVAHASS 56
Query: 865 HIQQGVSALQNAKKLQRN 918
+++G +Q A+ Q+N
Sbjct: 55 FVRRGTEQVQEARVQQKN 2
Score = 98.7 bits (209), Expect(2) = 1e-021
Identities = 63/139 (45%), Positives = 71/139 (51%)
Frame = -3 / +3
Query: 917 FLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRSLTA 738
F C A + P +A TW+S+LL P ST+ A+S N CNS F S SLTA
Sbjct: 3 FFCCTLAS*TCSVPLLTKELACATWLSILLSCCP*DSTKVAISKNT*CNSIKFFSISLTA 182
Query: 737 SCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYS 558
SC S IS VS I PLP IA SL P S PV VK L ST S YS
Sbjct: 183 SCLS*ISEIVSII*PLPCS*IALCMKFSLSPLDIKFSIVSSSAFSPVIVKYLRSTVSLYS 362
Query: 557 CLIASLKV*KSSIRSFNFF 501
I +LK *KSSI S +FF
Sbjct: 363 SCILALKP*KSSIISLSFF 419
Score = 26.3 bits (51), Expect(2) = 1e-021
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2 / +3
Query: 399 NFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFL 289
+F L + F NIF+H FHG + FL
Sbjct: 522 SFPLIIFDTFKDLFNIFVHSCSKFFHGFSIVHGFYFL 632
>gb|CG973490.1|CG973490 MBEKJ65TF mth2 Medicago truncatula genomic clone 74K10, DNA
sequence
Length = 681
Score = 174 bits (374), Expect(2) = 2e-054
Identities = 64/117 (54%), Positives = 96/117 (82%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
FT+TG + DE+TI++LI +G+SE + AIQ QGRGQI+DT++EIQERHDAV+++E+ L+
Sbjct: 196 FTITGEKADEDTIENLISSGESETFMQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLI 375
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCY 939
EL Q+F+DMA LVE+QG +NNIE+HV++A++ +++G L A++ Q++SRKW CY
Sbjct: 376 ELHQVFLDMAALVESQGQQLNNIESHVAHASSFVRRGTEQLHEAREHQKDSRKWTCY 546
Score = 60.6 bits (126), Expect(2) = 2e-054
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +1 / +3
Query: 397 VDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
++ L R N +NR PGCG S+ DR+R + KKLK+ MDDFQ LR ++Q
Sbjct: 3 LEAL*RSNAANRNIPGCGPRSSADRTRTSVVSGLGKKLKDMMDDFQGLRARMQQ 164
>gb|AW687606.2|AW687606 NF011D11RT1F1093 Developing root Medicago truncatula cDNA clone
NF011D11RT 5', mRNA sequence
Length = 517
Score = 205 bits (443), Expect = 9e-052
Identities = 81/166 (48%), Positives = 114/166 (68%)
Frame = +1 / +3
Query: 439 PGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDE 618
PG G GS+ DR+R ++KKLK+ MD F LR+ I +TVTG PD+
Sbjct: 9 PGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLRQQISSEYRETVQRRYYTVTGENPDD 188
Query: 619 ETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMA 798
+T+D LI TG+SE + AIQ QGR I+DT+ EIQERHD V+++ER L+EL Q+FMDM+
Sbjct: 189 KTVDLLISTGESETFLQKAIQQQGRANIMDTIQEIQERHDTVKEIERNLMELHQVFMDMS 368
Query: 799 VLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
VLV++QG+ ++NIE+HV+ A ++++ GV L A+K Q N+RKW C
Sbjct: 369 VLVQSQGEQLDNIESHVARANSYVRGGVQQLHVARKHQMNTRKWTC 506
Score = 111 bits (237), Expect = 2e-023
Identities = 68/163 (41%), Positives = 83/163 (50%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FL F+ F A + TP + +A TW+S+L SPC T+T MS+N +S FLS S
Sbjct: 496 FLVFIWCFLATCNCWTPPLTYELARATWLSILSNCSPCD*TKTDMSINTW*SSIRFLSIS 317
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
T SC S IS VS ++ LP CWIA SL P SG PVTV L T S
Sbjct: 316 FTVSCLS*ISWIVSMMFALPCCWIAFCKNVSLSPVEMRRSTVLSSGFSPVTV*YLRCTVS 137
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPG 438
YS I L++ K S+ S +FF L RS EP P PG
Sbjct: 136 LYSEDICCLRLLKLSMESLSFFLKPLTTDVLVRSEDEPGPAPG 8
>gb|BE319809.2|BE319809 NF022C06RT1F1038 Developing root Medicago truncatula cDNA clone
NF022C06RT 5', mRNA sequence
Length = 493
Score = 200 bits (432), Expect = 3e-050
Identities = 79/115 (68%), Positives = 102/115 (88%)
Frame = +1 / +3
Query: 592 TVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLE 771
TVTG RPD+ETID LIETG SEQIF+ AI GRGQ++ TV EIQERHDAV+++E+KLL+
Sbjct: 30 TVTGTRPDDETIDHLIETGNSEQIFQQAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLD 209
Query: 772 LQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
L QI++DMAVLVEAQG++++NIE+ V+NA +H+Q+G +ALQ+AKKLQ+NSRKWMC
Sbjct: 210 LHQIYLDMAVLVEAQGEILDNIESQVNNAVDHVQRGTTALQSAKKLQKNSRKWMC 374
Score = 117 bits (250), Expect = 4e-025
Identities = 65/121 (53%), Positives = 71/121 (58%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
F EF SF A SA+ P A TW+SML +SP AST TAMS I C SRSF S S
Sbjct: 364 FREFFWSFLAL*SAVVPLWT*STALLTWLSMLSKISP*ASTNTAMSR*I*CKSRSFFSIS 185
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
TASC S IS+TV + P P IA ICSLFP SG +PVTV TLLSTTS
Sbjct: 184 FTASCLS*ISSTVLTTCPRPASRIACWKICSLFPVSIRWSIVSSSGLVPVTVITLLSTTS 5
Query: 566 R 564
R
Sbjct: 4 R 2
>gb|BG452222.1|BG452222 NF085B03LF1F1029 Developing leaf Medicago truncatula cDNA clone
NF085B03LF 5', mRNA sequence
Length = 625
Score = 172 bits (371), Expect(3) = 1e-048
Identities = 77/119 (64%), Positives = 91/119 (76%)
Frame = +1 / +2
Query: 202 LKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAP 381
L F KKV +E KL NLL KL A+EE+ VTKA +MKAIKQRMEKD+DEV K A
Sbjct: 164 LDSFFKKVQELEKQYVKLDNLLRKLQDAHEETKAVTKAPAMKAIKQRMEKDVDEVKKTAY 343
Query: 382 QAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
KTKV+EL+++NL+NRQKP CGKGSAVDRSR TT A+KKKLKE+M +FQ LREAI +
Sbjct: 344 FLKTKVEELDKENLANRQKPACGKGSAVDRSRTATTIALKKKLKEKMAEFQILREAIHE 520
Score = 145 bits (312), Expect = 1e-033
Identities = 71/123 (57%), Positives = 81/123 (65%)
Frame = -3 / -2
Query: 569 SRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFV 390
SRYS +ASL++* S+I SF+FFF A VV LDRSTA+PFP GFCL + SLSSSST V
Sbjct: 531 SRYSSWMASLRI*NSAIFSFSFFFKAIVVAVLDRSTADPFPQAGFCLLAKFSLSSSSTLV 352
Query: 389 FA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKK 210
F A+F TSS SFSI C IAFM A VT SS+A WS R SF S + TF KK
Sbjct: 351 FKKYAVFLTSSTSFSILCFIAFMAGALVTALVSSWASWSFLKRLSSFTYCFSSS*TFLKK 172
Query: 209 SFK 201
K
Sbjct: 171 LSK 163
Score = 31.3 bits (62), Expect(3) = 1e-048
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIET 645
FTVT R D ETID LIET
Sbjct: 552 FTVTRARADXETIDXLIET 608
Score = 29.9 bits (59), Expect(3) = 1e-048
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 100 MNNLLTDSFELPRRDSSRDADI 165
MN+LLT+SFE+PR D ++
Sbjct: 65 MNDLLTESFEIPRGRGGGDIEL 130
>gb|BE320472.2|BE320472 NF031B04RT1F1029 Developing root Medicago truncatula cDNA clone
NF031B04RT 5', mRNA sequence
Length = 531
Score = 176 bits (378), Expect = 8e-043
Identities = 69/141 (48%), Positives = 98/141 (69%)
Frame = +1 / +2
Query: 514 ERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGR 693
+ MD F LR+ I +TVTG PD++T+D LI TG+SE + AIQ QGR
Sbjct: 14 DSMDSFNNLRQQISSEYRETVQRRYYTVTGENPDDKTVDLLISTGESETFLQKAIQQQGR 193
Query: 694 GQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQ 873
I+DT+ EIQERHD V+++ER L+EL Q+FMDM+VLV++QG+ ++NIE+HV+ A ++++
Sbjct: 194 ANIMDTIQEIQERHDTVKEIERNLMELHQVFMDMSVLVQSQGEQLDNIESHVARANSYVR 373
Query: 874 QGVSALQNAKKLQRNSRKWMC 936
GV L A+K Q N+RKW C
Sbjct: 374 GGVQQLHVARKHQMNTRKWTC 436
>emb|CT485798.1| Medicago truncatula chromosome 5 clone mth2-24d7, WORKING DRAFT
SEQUENCE
Length = 116322
Score = 84.9 bits (179), Expect(3) = 2e-040
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +1 / +2
Query: 706 DTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVS 885
D Q RH+A D++R L +L Q+F+DMA+LVE QG+ ++NIE +V NA +I G S
Sbjct: 39710 DADMRTQVRHEAAMDIQRSLNKLHQVFLDMAILVETQGEKVDNIEDNVVNAAQYIHGGTS 39889
Query: 886 ALQNAKKLQRNSRKWM 933
L A ++++ +RKW+
Sbjct: 39890 NLYYASQIKKRNRKWV 39937
Score = 66.6 bits (139), Expect(3) = 2e-040
Identities = 30/100 (30%), Positives = 55/100 (55%)
Frame = +1 / +2
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
D D+E+G NL F ++V+AI+ + +++NLL L NEE+ A ++ +
Sbjct: 39182 DVDLELGNLNPTQDPNLSQFFQEVEAIKVEMEEITNLLLDLQQLNEETKSTHSAKVLRGL 39361
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
+ RM+ D+ V + A K +++ L++ N++NR C K
Sbjct: 39362 RDRMDSDMVAVLRKANIIKARLEALQKSNIANRSISECYK 39481
Score = 55.1 bits (114), Expect(3) = 2e-040
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1 / +2
Query: 451 KGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETID 630
+GS +DR+R T +K KL++ M+DFQ+LR+ I +TVTG P +E ++
Sbjct: 39482 EGSPIDRTRVSVTNGLKVKLRDMMNDFQSLRDKIVLDHKEDLKRRYYTVTGEVPSDEVME 39661
Query: 631 DLI 639
+I
Sbjct: 39662 KMI 39670
>gb|BE319936.2|BE319936 NF021D10RT1F1078 Developing root Medicago truncatula cDNA clone
NF021D10RT 5', mRNA sequence
Length = 462
Score = 166 bits (356), Expect = 9e-040
Identities = 63/116 (54%), Positives = 90/116 (77%)
Frame = +1 / +1
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
+TVTG PD++T+D LI TG+SE + AIQ QGR I+DT+ EIQERHD V+++ER L+
Sbjct: 49 YTVTGENPDDKTVDLLISTGESETFLQKAIQQQGRANIMDTIQEIQERHDTVKEIERNLM 228
Query: 769 ELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
EL Q+FMDM+VLV++QG+ ++NIE+HV+ A ++++ GV L A+K Q N+RKW C
Sbjct: 229 ELHQVFMDMSVLVQSQGEQLDNIESHVARANSYVRGGVQQLHVARKHQMNTRKWTC 396
>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE
Length = 89591
Score = 157 bits (338), Expect = 3e-037
Identities = 63/135 (46%), Positives = 91/135 (67%)
Frame = +1 / +3
Query: 532 QTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDT 711
Q LR+ + +TVTG DEE I+ +I G E AIQ GRG++L+T
Sbjct: 22884 QGLRQKMMSEYKETVGRRYYTVTGEHADEEVIEKIISNGDDESFLGKAIQEHGRGKVLET 23063
Query: 712 VAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSAL 891
V EIQ+RHDA +++E+ LLEL QIF+DMAV+VEAQG+ +++IE HV +A+++++ G L
Sbjct: 23064 VVEIQDRHDAAKEIEKSLLELHQIFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNL 23243
Query: 892 QNAKKLQRNSRKWMC 936
AK+ Q++SRKWMC
Sbjct: 23244 HGAKQYQKSSRKWMC 23288
>gb|BF633520.1|BF633520 NF056B08DT1F1073 Drought Medicago truncatula cDNA clone NF056B08DT
5', mRNA sequence
Length = 563
Score = 155 bits (333), Expect(2) = 3e-037
Identities = 68/150 (45%), Positives = 97/150 (64%)
Frame = +1 / +1
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
D ++ + ++ + ++ F K++ + I K+S LL KL ANEES VTKAS+MKAI
Sbjct: 112 DIEMGLQDQRSSSDMGMEAFNKQIQDADKQIEKVSALLQKLKEANEESKAVTKASAMKAI 291
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLK 513
K+RMEKDIDEVGKIA K K++ + R+NL+NRQKPGC G+ +DR+R T ++ KK +
Sbjct: 292 KKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGCENGTGIDRARMNMTNSLTKKFR 471
Query: 514 ERMDDFQTLREAIRQXXXXXXXXXXFTVTG 603
+ M +FQTLR+ + FTVTG
Sbjct: 472 DLMTEFQTLRQEYKMNIVRVWKKKLFTVTG 561
Score = 106 bits (226), Expect = 8e-022
Identities = 59/124 (47%), Positives = 69/124 (55%)
Frame = -3 / -1
Query: 605 LPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLF 426
+PVTV T L + L+V S +RS NF V+ L S PF PGFCL
Sbjct: 563 VPVTVNNFFFHTLTIFILYSCLRVWNSVMRSLNFLVNEFVIFILALSIPVPFSQPGFCLL 384
Query: 425 DRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFA 246
R SL +S F AIFPTSSISFSI LIAFM AFVT DSS A +S + D+F+
Sbjct: 383 FRFSLLIASIFALTPCAIFPTSSISFSILFLIAFMADAFVTAFDSSLASFSF*SSADTFS 204
Query: 245 IILS 234
I LS
Sbjct: 203 ICLS 192
Score = 22.1 bits (42), Expect(2) = 3e-037
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 85 SLLAAMNNLLTDSF 126
S + MN+LLTDSF
Sbjct: 31 SSFSNMNDLLTDSF 72
>gb|BF648296.1|BF648296 NF044C10EC1F1081 Elicited cell culture Medicago truncatula cDNA
clone NF044C10EC 5', mRNA sequence
Length = 665
Score = 154 bits (331), Expect(2) = 6e-037
Identities = 68/149 (45%), Positives = 97/149 (65%)
Frame = +1 / +3
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
D ++ + ++ + ++ F K++ + I K+S LL KL ANEES VTKAS+MKAI
Sbjct: 219 DIEMGLQDQRSSSDMGMEAFNKQIQDADKQIEKVSALLQKLKEANEESKAVTKASAMKAI 398
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLK 513
K+RMEKDIDEVGKIA K K++ + R+NL+NRQKPGC KG+ +DR+R T ++ KK +
Sbjct: 399 KKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGCEKGTGIDRARMNMTNSLTKKFR 578
Query: 514 ERMDDFQTLREAIRQXXXXXXXXXXFTVT 600
+ M +FQTLR+ I+ TVT
Sbjct: 579 DLMTEFQTLRQRIQDEYREGVERKVITVT 665
Score = 119 bits (255), Expect = 8e-026
Identities = 65/122 (53%), Positives = 73/122 (59%)
Frame = -3 / -2
Query: 599 VTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDR 420
VTV T LST SRYS I L+V S +RS NF V+ L S PF PGFCL R
Sbjct: 664 VTVITFLSTPSRYSSCILCLRVWNSVMRSLNFLVNEFVIFILALSIPVPFSQPGFCLLFR 485
Query: 419 LSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAII 240
SL +S F AIFPTSSISFSI LIAFM AFVT DSS A +S + D+F+I
Sbjct: 484 FSLLIASIFALTPCAIFPTSSISFSILFLIAFMADAFVTAFDSSLASFSF*SSADTFSIC 305
Query: 239 LS 234
LS
Sbjct: 304 LS 299
Score = 22.1 bits (42), Expect(2) = 6e-037
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 85 SLLAAMNNLLTDSF 126
S + MN+LLTDSF
Sbjct: 138 SSFSNMNDLLTDSF 179
>gb|BI263433.1|BI263433 NF087C04PL1F1034 Phosphate starved leaf Medicago truncatula cDNA
clone NF087C04PL 5', mRNA sequence
Length = 603
Score = 151 bits (324), Expect(2) = 5e-036
Identities = 65/134 (48%), Positives = 93/134 (69%)
Frame = +1 / +1
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
D ++ + ++ + ++ F K++ + I K+S LL KL ANEES VTKAS+MKAI
Sbjct: 190 DIEMGLQDQRSSSDMGMEAFNKQIQDADKQIEKVSALLQKLKEANEESKAVTKASAMKAI 369
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLK 513
K+RMEKDIDEVGKIA K K++ + R+NL+NRQKPGC KG+ +DR+R T ++ KK
Sbjct: 370 KKRMEKDIDEVGKIAHGVKAKIEAINRENLNNRQKPGCEKGTGIDRARMNMTNSLTKKFX 549
Query: 514 ERMDDFQTLREAIR 555
+ M +FQTLR+ I+
Sbjct: 550 DLMTEFQTLRQRIQ 591
Score = 105 bits (223), Expect = 2e-021
Identities = 57/111 (51%), Positives = 65/111 (58%)
Frame = -3 / -2
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVF 387
RYS I L+V S +RS NF V+ L S PF PGFCL R SL +S F
Sbjct: 602 RYSSCILCLRVWNSVMRSXNFLVNEFVIFILALSIPVPFSQPGFCLLFRFSLLIASIFAL 423
Query: 386 A*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILS 234
AIFPTSSISFSI LIAFM AFVT DSS A +S + D+F+I LS
Sbjct: 422 TPCAIFPTSSISFSILFLIAFMADAFVTAFDSSLASFSF*SSADTFSICLS 270
Score = 22.1 bits (42), Expect(2) = 5e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 85 SLLAAMNNLLTDSF 126
S + MN+LLTDSF
Sbjct: 109 SSFSNMNDLLTDSF 150
>gb|CA921399.1|CA921399 EST639117 MTUS Medicago truncatula cDNA clone MTUS-39H3, mRNA
sequence
Length = 633
Score = 152 bits (326), Expect = 1e-035
Identities = 59/115 (51%), Positives = 84/115 (73%)
Frame = +1 / -2
Query: 592 TVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLE 771
TVTG DEE I+ + G E AIQ GRG++L+TV EIQ+RHDA +++E+ LLE
Sbjct: 632 TVTGEHADEEVIEKIFSNGDDESFLGKAIQDHGRGKVLETVVEIQDRHDAAKEIEKSLLE 453
Query: 772 LQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
L QIF+DMAV+VEAQG+ +++IE HV +A+++++ G L AK+ Q++SRKWMC
Sbjct: 452 LHQIFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNLHGAKQYQKSSRKWMC 288
>gb|BE319553.2|BE319553 NF015A06RT1F1037 Developing root Medicago truncatula cDNA clone
NF015A06RT 5', mRNA sequence
Length = 357
Score = 146 bits (314), Expect = 6e-034
Identities = 57/117 (48%), Positives = 83/117 (70%)
Frame = +1 / +2
Query: 529 FQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILD 708
F LR+ I +TVTG PD++T+D LI TG+SE + AIQ QGR I+D
Sbjct: 2 FNNLRQQISSEYRETVQRRYYTVTGENPDDKTVDLLISTGESETFLQKAIQQQGRANIMD 181
Query: 709 TVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQG 879
T+ EIQERHD V+++ER L+EL Q+FMDM+VLV++QG+ ++NIE+HV+ A ++++ G
Sbjct: 182 TIQEIQERHDTVKEIERNLMELHQVFMDMSVLVQSQGEQLDNIESHVARANSYVKGG 352
>gb|AL383572.1|AL383572 MtBC15C03F1 MtBC Medicago truncatula cDNA clone MtBC15C03 T3, mRNA
sequence
Length = 482
Score = 143 bits (306), Expect = 7e-033
Identities = 58/96 (60%), Positives = 78/96 (81%)
Frame = +1 / +3
Query: 646 GKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDM 825
G SEQIF+ AI GRGQ++ TV EIQERHDAV+++E+KLL+L I++DMAVLVEAQG++
Sbjct: 3 GNSEQIFQQAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHXIYLDMAVLVEAQGEI 182
Query: 826 INNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWM 933
++NIE+ V+NAT+H++ G AL AK LQ+ SRK M
Sbjct: 183 LDNIESQVANATDHVKSGNDALHTAKSLQKKSRKCM 290
Score = 103 bits (219), Expect = 7e-021
Identities = 56/120 (46%), Positives = 62/120 (51%)
Frame = -3 / -2
Query: 1004 FFHGWXXXXXXXXXXXXXXXXXXXXHFLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLI 825
FFHG+ HFL+F C FA A P VAF TW+SML
Sbjct: 361 FFHGFTTPSTIKMAMSRTNIMAIIMHFLDFFCKLFAVCRASLPDFT*SVAFATWLSMLSK 182
Query: 824 MSPCASTRTAMSMNICCNSRSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLFP 645
+SP AST TAMS C SRSF S S TASC S IS+TV + P P IA ICSLFP
Sbjct: 181 ISP*ASTNTAMSR*X*CKSRSFFSISFTASCLS*ISSTVLTTCPRPASRIACWKICSLFP 2
>gb|CL314551.1|CL314551 mth2-131P23_OP Medicago truncatula BAC end sequences Medicago
truncatula genomic 5', DNA sequence
Length = 687
Score = 119 bits (254), Expect(3) = 1e-031
Identities = 49/100 (49%), Positives = 66/100 (66%)
Frame = +1 / +2
Query: 442 GCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEE 621
GCG S+ DR+ + KKLK+ MDDFQ LR ++Q T+TG + DE+
Sbjct: 44 GCGPXSSADRTXTSVVSGLGKKLKDMMDDFQGLRATMQQEYKETIERRYXTITGEKADED 223
Query: 622 TIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDA 741
TI++LI +G+SE + AIQ QGRGQI+DT++EIQERHDA
Sbjct: 224 TIENLISSGESETFMQRAIQXQGRGQIMDTISEIQERHDA 343
Score = 31.3 bits (62), Expect(3) = 1e-031
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 742 VRDLERKLLELQQIFMDMAVLV 807
V++ E+ L+EL +F+DMA LV
Sbjct: 345 VKEXEKNLIELHXVFLDMAALV 410
Score = 25.8 bits (50), Expect(3) = 1e-031
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 802 LVEAQGDMINNIETHVS 852
L E+QG + NIE+HV+
Sbjct: 406 LFESQGQQLXNIESHVA 456
>gb|BQ139747.1|BQ139747 NF023H06PH1F1059 Phoma-infected Medicago truncatula cDNA clone
NF023H06PH 5', mRNA sequence
Length = 658
Score = 121 bits (258), Expect = 3e-026
Identities = 53/158 (33%), Positives = 87/158 (55%)
Frame = +1 / +1
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A +L F ++V+ ++ + +L L L ++E S + A ++K I+ +M+ D+
Sbjct: 178 AQTGVHLDKFFEEVEGVKEELKELDRLYESLRVSHERSKTLHSAKAVKDIRSKMDADVAL 357
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N ++R PG G GS+ DR+R ++KKLK+ MD F LR
Sbjct: 358 ALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLR 537
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSE 657
+ I +TVTG PD++T+D LI TG+SE
Sbjct: 538 QQISSEYRETVQRRYYTVTGENPDDKTVDLLISTGESE 651
>gb|BF646447.1|BF646447 NF075C12EC1F1097 Elicited cell culture Medicago truncatula cDNA
clone NF075C12EC 5', mRNA sequence
Length = 649
Score = 116 bits (248), Expect = 7e-025
Identities = 51/155 (32%), Positives = 84/155 (54%)
Frame = +1 / +1
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A +L F ++V+ ++ + +L L L ++E S + A ++K I+ +M+ D+
Sbjct: 172 AQTGVHLDKFFEEVEGVKEELKELDRLYESLRVSHERSKTLHSAKAVKDIRSKMDADVAL 351
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N ++R PG G GS+ DR+R ++KKLK+ MD F LR
Sbjct: 352 ALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLR 531
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETG 648
+ I +TVTG PD++T+D LI TG
Sbjct: 532 QQISSEYRETVQRRYYTVTGENPDDKTVDLLISTG 636
>gb|BF645784.1|BF645784 NF017E08EC1F1066 Elicited cell culture Medicago truncatula cDNA
clone NF017E08EC 5', mRNA sequence
Length = 680
Score = 113 bits (242), Expect = 5e-024
Identities = 50/154 (32%), Positives = 83/154 (53%)
Frame = +1 / +2
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A +L F ++V+ ++ + +L L L ++E S + A ++K I+ +M+ D+
Sbjct: 218 AQTGVHLDKFFEEVEGVKEELKELDRLYESLRVSHERSKTLHSAKAVKDIRSKMDADVAL 397
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N ++R PG G GS+ DR+R ++KKLK+ MD F LR
Sbjct: 398 ALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLR 577
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIET 645
+ I +TVTG PD++T+D LI T
Sbjct: 578 QQISSEYRETVQRRYYTVTGENPDDKTVDLLIST 679
>gb|BE319473.2|BE319473 NF019A06RT1F1037 Developing root Medicago truncatula cDNA clone
NF019A06RT 5', mRNA sequence
Length = 253
Score = 93.2 bits (197), Expect(2) = 5e-023
Identities = 38/58 (65%), Positives = 50/58 (86%)
Frame = +1 / +1
Query: 640 ETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEA 813
++G SEQIF+ AI GRGQ++ TV EIQERHDAV+++E+KLL+L QI++DMAVLVEA
Sbjct: 79 KSGNSEQIFQQAILEAGRGQVVSTV*EIQERHDAVKEIEKKLLDLHQIYLDMAVLVEA 252
Score = 36.8 bits (74), Expect(2) = 5e-023
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +3
Query: 592 TVTGNRPDEETIDDLIETGK 651
TVTG RPD+ETID LIE K
Sbjct: 30 TVTGTRPDDETIDHLIEIWK 89
>gb|BF646416.1|BF646416 NF071D06EC1F1057 Elicited cell culture Medicago truncatula cDNA
clone NF071D06EC 5', mRNA sequence
Length = 667
Score = 109 bits (233), Expect = 8e-023
Identities = 48/149 (32%), Positives = 81/149 (54%)
Frame = +1 / +1
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A +L F ++V+ ++ + +L L L ++E S + A ++K I+ +M+ D+
Sbjct: 181 AQTGVHLDKFFEEVEGVKEELKELDRLYESLRVSHERSKTLHSAKAVKDIRSKMDADVAL 360
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N ++R PG G GS+ DR+R ++KKLK+ MD F LR
Sbjct: 361 ALKKAKLVKLRLEALDRSNEASRSLPGAGPGSSSDRTRTSVVSGLRKKLKDSMDSFNNLR 540
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETID 630
+ I +TVTG PD++T+D
Sbjct: 541 QQISSEYRETVQRXYYTVTGENPDDKTVD 627
>gb|BE325413.2|BE325413 NF088F11ST1F1091 Developing stem Medicago truncatula cDNA clone
NF088F11ST 5', mRNA sequence
Length = 548
Score = 89.5 bits (189), Expect(3) = 2e-022
Identities = 41/87 (47%), Positives = 58/87 (66%)
Frame = +1 / +3
Query: 154 DADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAI 333
D ++ + ++ + ++ F K++ + I K+S LL KL ANEES VTKAS+MKAI
Sbjct: 198 DIEMGLQDQRSSSDMGMEAFNKQIQDADKQIEKVSALLQKLKEANEESKAVTKASAMKAI 377
Query: 334 KQRMEKDIDEVGKIAPQAKTKVDELER 414
K+RMEKDIDEVGKIA K K++ + R
Sbjct: 378 KKRMEKDIDEVGKIAHGVKAKIEAINR 458
Score = 33.6 bits (67), Expect(3) = 2e-022
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 433 QKPGCGKGSAVDRSREQTTGAV 498
QKPGC KG+ +DR+R T +
Sbjct: 479 QKPGCEKGTGIDRARMNMTNCI 544
Score = 22.1 bits (42), Expect(3) = 2e-022
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +3
Query: 85 SLLAAMNNLLTDSF 126
S + MN+LLTDSF
Sbjct: 117 SSFSNMNDLLTDSF 158
>gb|AJ496927.1|AJ496927 AJ496927 MTFLOW Medicago truncatula cDNA clone mt--abc955101g06,
mRNA sequence
Length = 434
Score = 106 bits (226), Expect = 8e-022
Identities = 40/59 (67%), Positives = 55/59 (93%)
Frame = +1 / +3
Query: 760 KLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
KLL+L QI++DMAVLVEAQG++++NIE+ V+NA +H+Q+G +ALQ+AKKLQ+NSRKWMC
Sbjct: 3 KLLDLHQIYLDMAVLVEAQGEILDNIESQVNNAVDHVQRGTTALQSAKKLQKNSRKWMC 179
>gb|AJ497868.1|AJ497868 AJ497868 MTFLOW Medicago truncatula cDNA clone mt--abc955115f01,
mRNA sequence
Length = 223
Score = 104 bits (221), Expect = 4e-021
Identities = 39/68 (57%), Positives = 58/68 (85%)
Frame = +1 / +2
Query: 733 HDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQ 912
HDAV+++E+ L + ++MAVLVEAQG++++NIE+ V+NA +H+Q+G +ALQ+AKKLQ
Sbjct: 2 HDAVKEIEKNFLIYIRFTLNMAVLVEAQGEILDNIESQVNNAVDHVQRGTTALQSAKKLQ 181
Query: 913 RNSRKWMC 936
+NSRKWMC
Sbjct: 182 KNSRKWMC 205
>emb|CR298951.1| mte1-16P11FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 677
Score = 52.4 bits (108), Expect(3) = 6e-021
Identities = 18/31 (58%), Positives = 28/31 (90%)
Frame = +1 / -3
Query: 697 QILDTVAEIQERHDAVRDLERKLLELQQIFM 789
Q++ TV EIQERHDAV+++E+KLL+L Q+++
Sbjct: 438 QVVSTVEEIQERHDAVKEIEKKLLDLHQVYL 346
Score = 45.1 bits (92), Expect(3) = 6e-021
Identities = 17/32 (53%), Positives = 25/32 (78%)
Frame = +1 / -3
Query: 826 INNIETHVSNATNHIQQGVSALQNAKKLQRNS 921
+N V+NA +H+Q+G +ALQ+AKKLQ+NS
Sbjct: 111 VNKRLVQVNNAVDHVQRGTTALQSAKKLQKNS 16
Score = 42.8 bits (87), Expect(3) = 6e-021
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +1 / -3
Query: 778 QIFMDMAVLVEAQGDMINNIETHV 849
QI++DMAVLVEAQG++++NIE+ V
Sbjct: 261 QIYLDMAVLVEAQGEILDNIESQV 190
>emb|CR295686.1| mte1-12G7FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 787
Score = 52.4 bits (108), Expect(3) = 8e-021
Identities = 18/31 (58%), Positives = 28/31 (90%)
Frame = +1 / -3
Query: 697 QILDTVAEIQERHDAVRDLERKLLELQQIFM 789
Q++ TV EIQERHDAV+++E+KLL+L Q+++
Sbjct: 428 QVVSTVEEIQERHDAVKEIEKKLLDLHQVYL 336
Score = 44.6 bits (91), Expect(3) = 8e-021
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1 / -3
Query: 826 INNIETHVSNATNHIQQGVSALQNAKKLQRN 918
+N V+NA +H+Q+G SALQ+AKKLQ+N
Sbjct: 101 VNKRLVQVNNAVDHVQRGTSALQSAKKLQKN 9
Score = 42.8 bits (87), Expect(3) = 8e-021
Identities = 16/24 (66%), Positives = 23/24 (95%)
Frame = +1 / -3
Query: 778 QIFMDMAVLVEAQGDMINNIETHV 849
QI++DMAVLVEAQG++++NIE+ V
Sbjct: 251 QIYLDMAVLVEAQGEILDNIESQV 180
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,052,940,502
Number of Sequences: 392609
Number of extensions: 14664673
Number of successful extensions: 91020
Number of sequences better than 1.0e-020: 44
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 42721284240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)