TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cD... 215 4e-055
gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell cultu... 215 4e-055
gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell cultu... 215 4e-055
gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Me... 215 4e-055
gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cD... 215 4e-055
gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula ... 215 4e-055
gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infect... 215 4e-055
gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula c... 215 4e-055
gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved l... 208 7e-053
gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell cultu... 205 6e-052
gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula c... 201 8e-051
gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula... 200 2e-050
gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula c... 174 7e-049
gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating ... 185 5e-046
gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula c... 174 1e-042
gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKI... 98 1e-040
gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower M... 139 5e-032
>gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cDNA clone pGVN-49J6, mRNA
sequence
Length = 393
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 56 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 235
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 236 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 379
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 372 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 193
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 192 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 55
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -3
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 370 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 191
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 190 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 59
>gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF080B09EC 5', mRNA sequence
Length = 656
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 140 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 319
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 320 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 463
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 456 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 277
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 276 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 139
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -2
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 454 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 275
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 274 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 143
>gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell culture Medicago truncatula cDNA
clone NF097B10EC 5', mRNA sequence
Length = 664
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 133 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 312
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 313 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 456
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 449 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 270
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 269 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 132
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -2
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 447 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 268
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 267 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 136
>gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF085B07IN 5', mRNA sequence
Length = 651
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 145 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 324
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 325 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 468
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 461 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 282
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 281 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 144
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 459 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 280
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 279 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 148
>gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cDNA clone pKV2-51F16, mRNA
sequence
Length = 544
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +2
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 38 PMEEDAVVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 217
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 218 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 361
Score = 160 bits (344), Expect = 2e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 354 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 175
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 174 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFTTASSSIG 37
Score = 124 bits (265), Expect = 2e-027
Identities = 51/104 (49%), Positives = 69/104 (66%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 352 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 173
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ + F H
Sbjct: 172 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILHDSIFFH 41
>gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula cDNA clone mt--abc955109g05,
mRNA sequence
Length = 623
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +3
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 45 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 224
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 225 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 368
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 361 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 182
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 181 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 44
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 359 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 180
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 179 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 48
>gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 522
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 97 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 276
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 277 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 420
Score = 159 bits (342), Expect = 4e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 413 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 234
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 233 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 96
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 411 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 232
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 231 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 100
>gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula cDNA clone MTYAH63, mRNA
sequence
Length = 756
Score = 215 bits (465), Expect = 4e-055
Identities = 92/108 (85%), Positives = 94/108 (87%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 124 PMEEDAVRKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 303
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 304 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 447
Score = 160 bits (343), Expect = 3e-038
Identities = 72/106 (67%), Positives = 78/106 (73%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 440 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 261
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 260 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFLTASSSIG 123
Score = 122 bits (260), Expect = 8e-027
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 438 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 259
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 258 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 127
>gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF067D09PL 5', mRNA sequence
Length = 683
Score = 208 bits (449), Expect = 7e-053
Identities = 90/108 (83%), Positives = 92/108 (85%)
Frame = +3 / +3
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 87 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
VREMWTEVPKTGKGKKKA PVNKDR ISKMFLRGDSVIIVLRN K* +
Sbjct: 267 VREMWTEVPKTGKGKKKAQPVNKDRXISKMFLRGDSVIIVLRNXK*AS 410
Score = 155 bits (334), Expect = 5e-037
Identities = 71/106 (66%), Positives = 77/106 (72%)
Frame = -3 / -2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ FLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 403 YLXFLRTMMTESPRRNILLMXRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 224
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
RP +FLL RQLIRT VLF TLIMST+ GP S++G
Sbjct: 223 RPRSFLLLRQLIRTCVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 86
Score = 119 bits (254), Expect = 5e-026
Identities = 50/104 (48%), Positives = 67/104 (64%)
Frame = -2 / -1
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 401 FGVPKNNDDRISTKEHFADXTILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 222
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFYVGFFRH 90
+L VV +D+NL ++ HHE+R T E LFL+ F H
Sbjct: 221 A*KLFVVTTIDQNLCVVFHTHHEYR*WTSVEFLFLILPDSIFFH 90
>gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell culture Medicago truncatula cDNA
clone NF061F08EC 5', mRNA sequence
Length = 682
Score = 205 bits (442), Expect = 6e-052
Identities = 86/92 (93%), Positives = 88/92 (95%)
Frame = +3 / +1
Query: 129 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 308
F+ GPLSVL MSV+NNTQVLINCRNNKKLLGRV AFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 157 FNIGPLSVLYMSVRNNTQVLINCRNNKKLLGRVMAFDRHCNMVLENVREMWTEVPKTGKG 336
Query: 309 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 404
KKKA PVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 337 KKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 432
Score = 167 bits (360), Expect = 1e-040
Identities = 73/89 (82%), Positives = 78/89 (87%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLMNLSLFTG AFF PLPVFGTSVHISLTFSRT+LQC SKA T
Sbjct: 431 YLGFLRTMMTESPRRNILLMNLSLFTG*AFFFPLPVFGTSVHISLTFSRTILQCLSKAMT 252
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMSTERGP 137
RP +FLLFRQ I T VLFLTL+ ST+ GP
Sbjct: 251 RPRSFLLFRQFISTCVLFLTLM*STDSGP 165
Score = 119 bits (255), Expect = 4e-026
Identities = 51/98 (52%), Positives = 66/98 (67%)
Frame = -2 / -2
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T++H AYE + V+ SL L+FT L LGPH PN+ KNH+AVPIE
Sbjct: 429 FGVPKNNDDRISTKKHFAYESIFVYWLSLFLSFTSLWNLGPHFPNIFKNHIAVPIESHDT 250
Query: 221 TKQLLVVPAVDKNLGIILDAHHEHRERTGAELLFLLFY 108
T +L VVP + + L II + H EHR + E LFL+ Y
Sbjct: 249 T*KLFVVPTIYQYLCIISNTHVEHR*WSNVEFLFLVHY 136
Score = 102 bits (217), Expect = 7e-021
Identities = 48/104 (46%), Positives = 71/104 (68%)
Frame = +2 / +3
Query: 95 GRNQHKKGGRGVQHRSSLGAHDERQE*YPGSYQLPEQQEVAWSRASLRSALQHGS*ER*G 274
GR + GRG+QH +++ A E +*Y G+ +L EQQ+ + S R ALQ+GS*+ *G
Sbjct: 123 GRCSDNEPGRGIQHWTTICALHEC*K*YTGTDKLSEQQKASRSCHGFR*ALQYGS*KC*G 302
Query: 275 DVDRGTEDR*RQEEGSPGEQGQVHKQDVPPWGFGHHCPQEPEMS 406
+VDRG++D *R+E+GS +Q +HKQ+V W F HHC EP+++
Sbjct: 303 NVDRGSKDW*RKEKGSASKQR*IHKQNVSSWRFCHHCS*EPQIN 434
>gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula cDNA clone MtTA01H10S6, mRNA
sequence
Length = 468
Score = 201 bits (434), Expect = 8e-051
Identities = 85/90 (94%), Positives = 86/90 (95%)
Frame = +3 / +2
Query: 141 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 320
P VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA
Sbjct: 2 PGQVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 181
Query: 321 LPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 182 QPVNKDRFISKMFLRGDSVIIVLRNPK*AS 271
Score = 152 bits (327), Expect = 5e-036
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -3 / -1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 264 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 85
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMST 149
RP +FLL RQLIRT VLF TLIMST
Sbjct: 84 RPRSFLLLRQLIRTCVLFFTLIMST 10
Score = 108 bits (231), Expect = 8e-023
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = -2 / -3
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 262 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 83
Query: 221 TKQLLVVPAVDKNLGIILDAHHEH 150
+L VV +D+NL ++ HHE+
Sbjct: 82 A*KLFVVTTIDQNLCVVFHTHHEY 11
>gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula cDNA clone MtBB22A12 T3, mRNA
sequence
Length = 464
Score = 200 bits (431), Expect = 2e-050
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +3 / +2
Query: 150 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPV 329
VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA PV
Sbjct: 2 VLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPV 181
Query: 330 NKDRFISKMFLRGDSVIIVLRNPK*VA 410
NKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 182 NKDRFISKMFLRGDSVIIVLRNPK*AS 262
Score = 152 bits (327), Expect = 5e-036
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 255 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 76
Query: 223 RPSNFLLFRQLIRTWVLFLTLIMST 149
RP +FLL RQLIRT VLF TLIMST
Sbjct: 75 RPRSFLLLRQLIRTCVLFFTLIMST 1
Score = 108 bits (231), Expect = 8e-023
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = -2 / -2
Query: 401 FRVPEDNDDRIPTEEHLAYEPVLVHRESLLLAFTGLRYLGPHLPNVLKNHVAVPIEGSHA 222
F VP++NDDRI T+EH A E +LV SLLL+FTGLR+L PH P++ KNH+AV I+
Sbjct: 253 FGVPKNNDDRISTKEHFADETILVDWLSLLLSFTGLRHLSPHFPDIFKNHIAVSIKSPDT 74
Query: 221 TKQLLVVPAVDKNLGIILDAHHEH 150
+L VV +D+NL ++ HHE+
Sbjct: 73 A*KLFVVTTIDQNLCVVFHTHHEY 2
>gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula cDNA clone MTYBA66, mRNA
sequence
Length = 754
Score = 174 bits (374), Expect(2) = 7e-049
Identities = 73/90 (81%), Positives = 75/90 (83%)
Frame = +3 / +3
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLM SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 117 PMEEDAVGKNEEEEFNTGPLSVLMRSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 296
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKM 356
VREMWTEVPKTGKGKKKA PVNKDRFIS +
Sbjct: 297 VREMWTEVPKTGKGKKKAQPVNKDRFISNV 386
Score = 122 bits (261), Expect(2) = 9e-033
Identities = 56/89 (62%), Positives = 62/89 (69%)
Frame = -3 / -1
Query: 352 LLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWVL 173
LLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA TRP +FLL RQLIRT VL
Sbjct: 382 LLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRTCVL 203
Query: 172 FLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
F TL+MST+ GP S++G
Sbjct: 202 FFTLLMSTDSGPVLNSSSSFFPTASSSIG 116
Score = 41.4 bits (84), Expect(2) = 7e-049
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 348 SKMFLRGDSVIIVLRNPK*VA 410
S MFLRGDSVIIVLRNPK* +
Sbjct: 376 SAMFLRGDSVIIVLRNPK*AS 438
Score = 39.1 bits (79), Expect(2) = 9e-033
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3 / -3
Query: 403 HFGFLRTMMTESPRRNI 353
+ GFLRTMMTESPRRNI
Sbjct: 431 YLGFLRTMMTESPRRNI 381
>gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 365
Score = 185 bits (399), Expect = 5e-046
Identities = 78/92 (84%), Positives = 79/92 (85%)
Frame = +3 / +3
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 90 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 269
Query: 267 VREMWTEVPKTGKGKKKALPVNKDRFISKMFL 362
VREMWTEVPKTGKGKKKA PVNKDRFISKMFL
Sbjct: 270 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFL 365
Score = 130 bits (278), Expect = 3e-029
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = -3 / -2
Query: 361 RNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRT 182
RNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA TRP +FLL RQLIRT
Sbjct: 364 RNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRT 185
Query: 181 WVLFLTLIMSTERGPXXXXXXXXXXXXXSAMG 86
VLF TLIMST+ GP S++G
Sbjct: 184 CVLFFTLIMSTDSGPVLNSSSSFFPTASSSIG 89
>gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula cDNA clone pHOGA-18D13 5' end,
mRNA sequence
Length = 508
Score = 174 bits (374), Expect = 1e-042
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +3 / +3
Query: 180 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 359
+VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA PVNKDRFISKMF
Sbjct: 9 RVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMF 188
Query: 360 LRGDSVIIVLRNPK*VA 410
LRGDSVIIVLR+PK* +
Sbjct: 189 LRGDSVIIVLRSPK*AS 239
Score = 132 bits (282), Expect = 7e-030
Identities = 58/74 (78%), Positives = 61/74 (82%)
Frame = -3 / -1
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGTSVHISLTFSRTMLQCRSKART 224
+ G LRTMMTESPRRNILLM SL TG AFF PLPV GTSVHIS TFSRT+LQC SKA T
Sbjct: 232 YLGLLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGTSVHISRTFSRTILQCLSKALT 53
Query: 223 RPSNFLLFRQLIRT 182
RP +FLL RQLIRT
Sbjct: 52 RPRSFLLLRQLIRT 11
>gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 110967
Score = 97.7 bits (207), Expect(2) = 1e-040
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +3 / -1
Query: 153 LMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 290
LM+ ++ QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 99852 LMLILQTPMQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 99715
Score = 90.0 bits (190), Expect(2) = 1e-040
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +3 / -1
Query: 285 EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*VA 410
+VPKTGKGKKKA PVNKDRFISKMFLRGDSVIIVLRNPK* +
Sbjct: 99618 QVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK*AS 99493
Score = 73.5 bits (154), Expect(3) = 5e-030
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = -3 / +2
Query: 403 HFGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 287
+ GFLRTMMTESPRRNILLM SL TG AFF PLPV GT
Sbjct: 99500 YLGFLRTMMTESPRRNILLMKRSLLTG*AFFFPLPVLGT 99616
Score = 67.0 bits (140), Expect(3) = 5e-030
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3 / +2
Query: 289 TSVHISLTFSRTMLQCRSKARTRPSNFLLFRQLIRTWV 176
TSVHIS TFSRT+LQC SKA TRP +FLL RQLIRT +
Sbjct: 99716 TSVHISRTFSRTILQCLSKALTRPRSFLLLRQLIRTCI 99829
Score = 29.5 bits (58), Expect(3) = 5e-030
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 184 TWVLFLTLIMSTERGP 137
T VLF TLIMST+ GP
Sbjct: 99916 TCVLFFTLIMSTDSGP 99963
>gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower Medicago truncatula cDNA clone
NF020H02FL 5', mRNA sequence
Length = 354
Score = 139 bits (298), Expect = 5e-032
Identities = 59/73 (80%), Positives = 60/73 (82%)
Frame = +3 / +1
Query: 87 PMAXXXXXXXXXXXFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLEN 266
PM F+TGPLSVLMMSVKNNTQVLIN RNNKKLLGRVRAFDRHCNMVLEN
Sbjct: 136 PMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINXRNNKKLLGRVRAFDRHCNMVLEN 315
Query: 267 VREMWTEVPKTGK 305
VREMWTEVPKTGK
Sbjct: 316 VREMWTEVPKTGK 354
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 573,604,634
Number of Sequences: 392609
Number of extensions: 7229368
Number of successful extensions: 35625
Number of sequences better than 1.0e-020: 25
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21427385650
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)