TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950160.2.1
(846 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cD... 164 2e-056
gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-... 159 5e-053
gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula ... 79 4e-039
gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell cultu... 71 5e-039
gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cD... 69 4e-034
gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORK... 79 4e-033
gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower M... 65 5e-031
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 65 5e-031
gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula c... 67 2e-030
gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula c... 63 2e-030
gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula c... 69 2e-029
gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula c... 69 2e-029
gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula c... 69 2e-029
gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Med... 69 2e-029
emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17... 81 3e-029
gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula g... 77 6e-029
gb|AC155898.15| Medicago truncatula clone mth2-109f1, compl... 69 2e-028
gb|AC158737.14| Medicago truncatula clone mth2-154f20, comp... 69 3e-028
gb|AC146721.7| Medicago truncatula clone mth2-145n10, compl... 67 3e-027
gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone m... 70 7e-027
gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula c... 67 6e-026
gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKI... 67 2e-025
gb|AC148653.1| Medicago truncatula chromosome unknown clone... 66 3e-025
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 65 4e-025
gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula... 65 7e-024
gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula c... 67 2e-023
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 65 3e-023
gb|CG956619.1|CG956619 MBEFU73TF mth2 Medicago truncatula g... 66 4e-023
gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula g... 57 2e-022
gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower M... 69 9e-022
gb|CG938710.1|CG938710 MBEEA61TRC mth2 Medicago truncatula ... 66 2e-021
gb|CG946208.1|CG946208 MBEEA63TRC mth2 Medicago truncatula ... 66 6e-021
>gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cDNA clone pGVN-63F8 5' end, mRNA
sequence
Length = 593
Score = 164 bits (352), Expect(2) = 2e-056
Identities = 59/84 (70%), Positives = 67/84 (79%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDLATIKEGAVLHYNGNMKPWLK 576
D TLWKLG+LPPGLL FYGL E LDP WHVLG GYT VD I+ GAVLH+NGN KPWLK
Sbjct: 289 DRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLK 468
Query: 575 IGMEKYKSFWDNYVDYSHPLIQQC 504
IG+EKYK W+ ++DYSH +QQC
Sbjct: 469 IGIEKYKPLWEKHIDYSHTFLQQC 540
Score = 99.1 bits (210), Expect(2) = 2e-029
Identities = 49/87 (56%), Positives = 52/87 (59%)
Frame = +1 / -1
Query: 490 NQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVARSTVV*PSPKT 669
NQ HC K E*S S + LYFSIPI + G FPL CSTAP I ST V*P P T
Sbjct: 554 NQ*KLHCCKKV*E*SICFSHRGLYFSIPIFNQGLEFPLKCSTAPLSIN*GSTFV*PKPST 375
Query: 670 CHLGSNASTKP*KARSPGGKDPSFHRV 750
CH GS S P* +PGGK PSFH V
Sbjct: 374 CHDGSKGSVSP*NVNNPGGKVPSFHNV 294
Score = 77.1 bits (162), Expect(2) = 2e-056
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WAFGMNV DLVEWR KNVTGIYHYWQE+NV
Sbjct: 199 WAFGMNVFDLVEWRKKNVTGIYHYWQEKNV 288
Score = 51.5 bits (106), Expect(2) = 2e-029
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +3 / -1
Query: 756 TLRSCQ**YMPVTFLFLHSTRSSTFIPNA 842
T SCQ* MPVTF FLHST+S+TFIPNA
Sbjct: 287 TFFSCQ*W*MPVTFFFLHSTKSNTFIPNA 201
>gb|AC173290.1| Medicago truncatula chromosome 2 clone mth2-45a9, *** SEQUENCING IN
PROGRESS ***, 7 unordered pieces
Length = 125396
Score = 159 bits (342), Expect(2) = 5e-053
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -2 / -1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDLATIKEGAVLHYNGNMKPWLK 576
D TLWKLG+LPPGLL FYGL+ LD WHVLG GYT VD I++G VLH+NGN KPWLK
Sbjct: 46655 DRTLWKLGTLPPGLLTFYGLI*KLDRSWHVLGFGYTKVDPRLIEKGVVLHFNGNSKPWLK 46476
Query: 575 IGMEKYKSFWDNYVDYSHPLIQQC 504
IG+EKYK W+ ++DYSHPL+Q+C
Sbjct: 46475 IGIEKYKPLWEKHIDYSHPLLQEC 46404
Score = 159 bits (342), Expect(2) = 5e-053
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYTTVDLATIKEGAVLHYNGNMKPWLK 576
D TLWKLG+LPPGLL FYGL+ LD WHVLG GYT VD I++G VLH+NGN KPWLK
Sbjct: 105669 DRTLWKLGTLPPGLLTFYGLI*KLDRSWHVLGFGYTKVDPRLIEKGVVLHFNGNSKPWLK 105490
Query: 575 IGMEKYKSFWDNYVDYSHPLIQQC 504
IG+EKYK W+ ++DYSHPL+Q+C
Sbjct: 105489 IGIEKYKPLWEKHIDYSHPLLQEC 105418
Score = 89.5 bits (189), Expect(2) = 3e-025
Identities = 46/87 (52%), Positives = 49/87 (56%)
Frame = +1 / +2
Query: 490 NQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVARSTVV*PSPKT 669
NQ H KG E*S S + LYFS+PI + G FPL CST P I ST V*P P T
Sbjct: 105404 NQ*KLHSCNKG*E*SICFSHRGLYFSMPIFNQGLEFPLKCSTTPFSINRGSTFV*PKPST 105583
Query: 670 CHLGSNASTKP*KARSPGGKDPSFHRV 750
CH SN P* SPGG PSFH V
Sbjct: 105584 CHDRSNF*INP*NVNSPGGNVPSFHSV 105664
Score = 89.5 bits (189), Expect(2) = 3e-025
Identities = 46/87 (52%), Positives = 49/87 (56%)
Frame = +1 / +1
Query: 490 NQRMKHC*IKGCE*ST*LSQKLLYFSIPILSHGFIFPL*CSTAPSLIVARSTVV*PSPKT 669
NQ H KG E*S S + LYFS+PI + G FPL CST P I ST V*P P T
Sbjct: 46390 NQ*KLHSCNKG*E*SICFSHRGLYFSMPIFNQGLEFPLKCSTTPFSINRGSTFV*PKPST 46569
Query: 670 CHLGSNASTKP*KARSPGGKDPSFHRV 750
CH SN P* SPGG PSFH V
Sbjct: 46570 CHDRSNF*INP*NVNSPGGNVPSFHSV 46650
Score = 70.3 bits (147), Expect(2) = 5e-053
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMNV DLVEWR NVTGIYHYWQ +N
Sbjct: 46745 WAFGMNVFDLVEWRKNNVTGIYHYWQAKN 46659
Score = 70.3 bits (147), Expect(2) = 5e-053
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMNV DLVEWR NVTGIYHYWQ +N
Sbjct: 105759 WAFGMNVFDLVEWRKNNVTGIYHYWQAKN 105673
Score = 47.3 bits (97), Expect(2) = 3e-025
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2 / +1
Query: 758 IALLPIMIYACHILVPPFNQIKHVHTKCP 844
I LPIM+ A +I+ PP NQIK++H KCP
Sbjct: 105673 ILCLPIMVDAGYIIFPPLNQIKYIHPKCP 105759
Score = 47.3 bits (97), Expect(2) = 3e-025
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 758 IALLPIMIYACHILVPPFNQIKHVHTKCP 844
I LPIM+ A +I+ PP NQIK++H KCP
Sbjct: 46659 ILCLPIMVDAGYIIFPPLNQIKYIHPKCP 46745
>gb|BI309958.1|BI309958 EST5311708 GESD Medicago truncatula cDNA clone pGESD4L15 5' end,
mRNA sequence
Length = 731
Score = 78.5 bits (165), Expect(3) = 4e-039
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++D I+ AV+HYNGNMKPWL+I M KY+ +W YV Y+HP ++ C
Sbjct: 446 SIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNC 589
Score = 68.9 bits (144), Expect(3) = 4e-039
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYT 648
D LWKLG+LPPGL+ FYGL L+ WHVLGLGY+
Sbjct: 335 DRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYS 442
Score = 54.2 bits (112), Expect(3) = 4e-039
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN+ DL W+ K++TGIYH WQ N
Sbjct: 245 WAYGMNMFDLKVWKKKDITGIYHRWQNLN 331
>gb|BF650423.1|BF650423 NF088D03EC1F1028 Elicited cell culture Medicago truncatula cDNA
clone NF088D03EC 5', mRNA sequence
Length = 645
Score = 71.2 bits (149), Expect(3) = 5e-039
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = -2 / +1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
++L I AV HYNGN KPWL + + KYKS+W YV + +P +Q C +R
Sbjct: 331 LNLTEIDNAAVXHYNGNFKPWLNLAVSKYKSYWSKYVMFDNPYLQVCNLR 480
Score = 68.0 bits (142), Expect(3) = 5e-039
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D TLWKLG+LPPGL+ FY L LD WHVLGLGY
Sbjct: 217 DRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGY 321
Score = 62.0 bits (129), Expect(3) = 5e-039
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WAFGMNV DL EW+ +N+TGIYH WQ+ N
Sbjct: 127 WAFGMNVFDLKEWKKRNITGIYHRWQDLN 213
>gb|CB892201.1|CB892201 EST649170 KV3 Medicago truncatula cDNA clone KV3-53D13, mRNA
sequence
Length = 822
Score = 68.9 bits (144), Expect(3) = 4e-034
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = -2 / -3
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
V+ I+ AV+HYNGN+KPWL+I + K+K +W YVDY +++C
Sbjct: 331 VNQKDIERAAVIHYNGNLKPWLEISIPKFKGYWTKYVDYESEYLREC 191
Score = 58.3 bits (121), Expect(3) = 4e-034
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMNV DLVEW+ +N+T +YH WQ+ N
Sbjct: 535 WAYGMNVFDLVEWKKQNITEVYHNWQKLN 449
Score = 57.4 bits (119), Expect(3) = 4e-034
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ L+ WHVLGLGY
Sbjct: 445 DRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGY 341
>gb|AC147014.24| Medicago truncatula clone mth2-164l15, WORKING DRAFT SEQUENCE
Length = 127679
Score = 78.5 bits (165), Expect(3) = 4e-033
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++D I+ AV+HYNGNMKPWL+I M KY+ +W YV Y+HP ++ C
Sbjct: 86697 SIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNC 86554
Score = 68.9 bits (144), Expect(3) = 4e-033
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYT 648
D LWKLG+LPPGL+ FYGL L+ WHVLGLGY+
Sbjct: 86808 DRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYS 86701
Score = 52.4 bits (108), Expect(3) = 4e-033
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQ 767
WA+GMN+ DL W+ K++TGIYH WQ
Sbjct: 87213 WAYGMNMFDLKVWKKKDITGIYHRWQ 87136
>gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF024D06FL 5', mRNA sequence
Length = 724
Score = 64.8 bits (135), Expect(3) = 5e-031
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLGLGY
Sbjct: 222 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 326
Score = 62.9 bits (131), Expect(3) = 5e-031
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+H+NGNMKPWL I M ++K W YVD +Q C
Sbjct: 333 SISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQAC 476
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR T YHYWQ N
Sbjct: 132 WAYGMNFFDLDAWRRVKCTEEYHYWQNLN 218
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 64.8 bits (135), Expect(3) = 5e-031
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLGLGY
Sbjct: 335 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 439
Score = 62.9 bits (131), Expect(3) = 5e-031
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+H+NGNMKPWL I M ++K W YVD +Q C
Sbjct: 446 SISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQAC 589
Score = 46.4 bits (95), Expect(3) = 5e-031
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR T YHYWQ N
Sbjct: 245 WAYGMNFFDLDAWRRVKCTEEYHYWQNLN 331
>gb|CA919688.1|CA919688 EST637406 MTUS Medicago truncatula cDNA clone MTUS-16F9, mRNA
sequence
Length = 756
Score = 66.6 bits (139), Expect(3) = 2e-030
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -2 / -3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW+LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 559 DLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGY 455
Score = 56.1 bits (116), Expect(3) = 2e-030
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2 / -3
Query: 629 IKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
++ V+H+NG KPWL I + +S W YVD+S I+ C +R
Sbjct: 430 VENAGVIHFNGRAKPWLDIAFPELRSLWTKYVDFSDKFIKSCNIR 296
Score = 49.6 bits (102), Expect(3) = 2e-030
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WA+GMN+ DL WR N++ YH+W +N+
Sbjct: 655 WAYGMNIFDLEAWRRTNISNKYHHWVAQNI 566
>gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula cDNA clone GESD-28P9, mRNA
sequence
Length = 695
Score = 62.9 bits (131), Expect(3) = 2e-030
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+H+NGNMKPWL I M ++K W YVD +Q C
Sbjct: 312 SISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQAC 455
Score = 62.9 bits (131), Expect(3) = 2e-030
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLG GY
Sbjct: 201 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGFGY 305
Score = 46.4 bits (95), Expect(3) = 2e-030
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR T YHYWQ N
Sbjct: 111 WAYGMNFFDLDAWRRVKCTEEYHYWQNLN 197
>gb|CA922000.1|CA922000 EST639718 MTUS Medicago truncatula cDNA clone MTUS-47D7, mRNA
sequence
Length = 808
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2 / -2
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+D I++ AV+HY+G KPW+ IG+ +YKS+W ++ + HPL+++C
Sbjct: 447 IDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRC 307
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
WAFGMN+ DL +WR N+TG+YH + +R
Sbjct: 651 WAFGMNLFDLQQWRQHNLTGVYHKYLQR 568
Score = 48.7 bits (100), Expect(3) = 2e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
L+ GSLP G L FY + LD +WH+LGLGY
Sbjct: 552 LFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 457
>gb|CA922579.1|CA922579 EST640297 MTUS Medicago truncatula cDNA clone MTUS-55E11, mRNA
sequence
Length = 775
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2 / -1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+D I++ AV+HY+G KPW+ IG+ +YKS+W ++ + HPL+++C
Sbjct: 391 IDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRC 251
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
WAFGMN+ DL +WR N+TG+YH + +R
Sbjct: 595 WAFGMNLFDLQQWRQHNLTGVYHKYLQR 512
Score = 48.7 bits (100), Expect(3) = 2e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -1
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
L+ GSLP G L FY + LD +WH+LGLGY
Sbjct: 496 LFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 401
>gb|BQ165630.1|BQ165630 EST611499 KVKC Medicago truncatula cDNA clone pKVKC-10F2, mRNA
sequence
Length = 735
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2 / -2
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+D I++ AV+HY+G KPW+ IG+ +YKS+W ++ + HPL+++C
Sbjct: 470 IDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRC 330
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3 / -2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
WAFGMN+ DL +WR N+TG+YH + +R
Sbjct: 674 WAFGMNLFDLQQWRQHNLTGVYHKYLQR 591
Score = 48.7 bits (100), Expect(3) = 2e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / -2
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
L+ GSLP G L FY + LD +WH+LGLGY
Sbjct: 575 LFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 480
>gb|BG453110.1|BG453110 NF092D05LF1F1043 Developing leaf Medicago truncatula cDNA clone
NF092D05LF 5', mRNA sequence
Length = 652
Score = 68.9 bits (144), Expect(3) = 2e-029
Identities = 20/47 (42%), Positives = 35/47 (74%)
Frame = -2 / +1
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+D I++ AV+HY+G KPW+ IG+ +YKS+W ++ + HPL+++C
Sbjct: 439 IDTNKIEQAAVIHYDGIRKPWMDIGLGRYKSYWSKFMKFDHPLLRRC 579
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
WAFGMN+ DL +WR N+TG+YH + +R
Sbjct: 235 WAFGMNLFDLQQWRQHNLTGVYHKYLQR 318
Score = 48.7 bits (100), Expect(3) = 2e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2 / +1
Query: 746 LWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
L+ GSLP G L FY + LD +WH+LGLGY
Sbjct: 334 LFNTGSLPLGWLTFYNKIMILDRRWHILGLGY 429
>emb|CR341503.1| mte1-73J4RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 471
Score = 81.3 bits (171), Expect(2) = 3e-029
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -2 / -1
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
TVD + I+ AV+HYNGNMKPWL I M KY+S+W YV Y+H +Q+C
Sbjct: 345 TVDRSMIENAAVVHYNGNMKPWLAIAMTKYRSYWTKYVKYNHSYLQKC 202
Score = 68.9 bits (144), Expect(2) = 3e-029
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / -1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYT 648
D LWKLG+LPPGL+ FYGL L+ WHVLGLGY+
Sbjct: 456 DRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYS 349
>gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula genomic clone 78A1, DNA sequence
Length = 914
Score = 77.1 bits (162), Expect(2) = 6e-029
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERNV 755
WAFGMNV DLVEWR KNVTGIYHYWQE+NV
Sbjct: 682 WAFGMNVFDLVEWRKKNVTGIYHYWQEKNV 771
Score = 72.1 bits (151), Expect(2) = 6e-029
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLG 660
D TLWKLG+LPPGLL FYGL E LDP WHVLG
Sbjct: 772 DRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLG 867
>gb|AC155898.15| Medicago truncatula clone mth2-109f1, complete sequence
Length = 93173
Score = 68.9 bits (144), Expect(3) = 2e-028
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = -2 / +2
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
V+ I+ AV+HYNGN+KPWL+I + K+K +W YVDY +++C
Sbjct: 45512 VNQKDIERAAVIHYNGNLKPWLEISIPKFKGYWTKYVDYESEYLREC 45652
Score = 57.4 bits (119), Expect(3) = 2e-028
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ L+ WHVLGLGY
Sbjct: 45398 DRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGY 45502
Score = 56.5 bits (117), Expect(3) = 2e-028
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -3 / +1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQE 764
WA+GMNV DLVEW+ +N+T +YH WQ+
Sbjct: 45163 WAYGMNVFDLVEWKKQNITEVYHNWQK 45243
>gb|AC158737.14| Medicago truncatula clone mth2-154f20, complete sequence
Length = 114538
Score = 68.9 bits (144), Expect(3) = 3e-028
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = -2 / +3
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
V+ I+ AV+HYNGN+KPWL+I + K+K +W YVDY +++C
Sbjct: 1314 VNQKDIERAAVIHYNGNLKPWLEISIPKFKGYWTKYVDYESEYLREC 1454
Score = 57.4 bits (119), Expect(3) = 3e-028
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ L+ WHVLGLGY
Sbjct: 1200 DRQLWKLGTLPPGLITFWKRTFPLNRSWHVLGLGY 1304
Score = 56.5 bits (117), Expect(3) = 3e-028
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQE 764
WA+GMNV DLVEW+ +N+T +YH WQ+
Sbjct: 965 WAYGMNVFDLVEWKKQNITEVYHNWQK 1045
>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
Length = 133097
Score = 67.0 bits (140), Expect(3) = 3e-027
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -2 / -2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNGNMKPWL I + +YK+ W YVD +Q C
Sbjct: 46489 SISMDEINNAAVIHYNGNMKPWLDIALNQYKNLWTKYVDSDMEFVQMC 46346
Score = 65.7 bits (137), Expect(3) = 3e-027
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D T+WK G+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 46600 DQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGY 46496
Score = 46.9 bits (96), Expect(3) = 3e-027
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
W +GMN+ DL WR + T YHYWQ +
Sbjct: 47105 WTYGMNIFDLDAWRREKCTEHYHYWQNK 47022
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence
Length = 172016
Score = 69.8 bits (146), Expect(3) = 7e-027
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = -2 / -2
Query: 644 VDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
V+ I AV+HYNGNMKPWL+I + K++ +W YV+Y+H +++C
Sbjct: 52180 VNQKDIDRAAVMHYNGNMKPWLEISIPKFRGYWTKYVNYNHVYLREC 52040
Score = 57.4 bits (119), Expect(3) = 7e-027
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ L+ WHVLGLGY
Sbjct: 52294 DRQLWKLGTLPPGLITFWKRTFPLNKAWHVLGLGY 52190
Score = 51.9 bits (107), Expect(3) = 7e-027
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQ 767
WA+GMNV DLV+W+ + +T +YH WQ
Sbjct: 52716 WAYGMNVFDLVQWKRQKITEVYHNWQ 52639
>gb|AW981266.1|AW981266 EST392419 DSIL Medicago truncatula cDNA clone pDSIL-12F23, mRNA
sequence
Length = 667
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNGNMKPWL I + +YK+ W YVD +Q C
Sbjct: 144 SISMDEINNAAVIHYNGNMKPWLDIALNQYKNLWTKYVDSDMEFVQMC 287
Score = 65.7 bits (137), Expect(3) = 6e-026
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D T+WK G+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 33 DQTIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGY 137
Score = 24.0 bits (46), Expect(3) = 6e-026
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3 / +3
Query: 781 YHYWQERN 758
YHYWQ +N
Sbjct: 6 YHYWQNKN 29
>gb|AC150844.30| Medicago truncatula clone mth2-104a5, WORKING DRAFT SEQUENCE, 7 ordered
pieces
Length = 137420
Score = 66.6 bits (139), Expect(3) = 2e-025
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2 / -1
Query: 629 IKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
+K AV+HYNG KPWL+IG E K FW YV+YS+ ++ C
Sbjct: 40637 VKMAAVIHYNGQSKPWLEIGFEHLKPFWTKYVNYSNDFVRNC 40512
Score = 64.3 bits (134), Expect(3) = 2e-025
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -2 / -1
Query: 749 TLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
T+WKLG+LPP L+AF G V +DP WH+LGLGY
Sbjct: 40760 TMWKLGTLPPALIAFRGHVHPIDPSWHMLGLGY 40662
Score = 42.8 bits (87), Expect(3) = 2e-025
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYW 770
WA+GMNV DL WR N+ YH W
Sbjct: 41306 WAYGMNVFDLRAWRAANIRETYHSW 41232
>gb|AC148653.1| Medicago truncatula chromosome unknown clone mte1-26k20, *** SEQUENCING
IN PROGRESS ***, 11 unordered pieces
Length = 147635
Score = 65.7 bits (137), Expect(3) = 3e-025
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2 / -2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 24214 DLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGY 24110
Score = 55.6 bits (115), Expect(3) = 3e-025
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / -2
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
+L K V+H+NG KPWL I + K W YVD+S I+ C +R
Sbjct: 24097 NLVDAKNAGVVHFNGWAKPWLDIAFPQLKPLWTKYVDFSDNFIESCHIR 23951
Score = 51.9 bits (107), Expect(3) = 3e-025
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQER 761
WA+GMN+LDL WR N++ YHYW E+
Sbjct: 24512 WAYGMNILDLEAWRKTNISYTYHYWVEQ 24429
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 64.8 bits (135), Expect(3) = 4e-025
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLGLGY
Sbjct: 51093 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 51197
Score = 62.9 bits (131), Expect(3) = 4e-025
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / +3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+H+NGNMKPWL I M ++K W YVD +Q C
Sbjct: 51204 SISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQAC 51347
Score = 44.6 bits (91), Expect(3) = 4e-025
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQ 767
WA+GMN DL WR T YHYWQ
Sbjct: 50352 WAYGMNFFDLDAWRRVKCTEEYHYWQ 50429
>gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula cDNA clone MtBB29G01 T7, mRNA
sequence
Length = 527
Score = 64.8 bits (135), Expect(3) = 7e-024
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLGLGY
Sbjct: 29 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 133
Score = 62.9 bits (131), Expect(3) = 7e-024
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+H+NGNMKPWL I M ++K W YVD +Q C
Sbjct: 140 SISMDEINNAAVVHFNGNMKPWLDIAMTQFKPLWSKYVDVELEFVQAC 283
Score = 22.1 bits (42), Expect(3) = 7e-024
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3 / +2
Query: 781 YHYWQERN 758
YHYWQ N
Sbjct: 2 YHYWQNLN 25
>gb|CA918792.1|CA918792 EST636510 MTUS Medicago truncatula cDNA clone MTUS-3C6, mRNA
sequence
Length = 667
Score = 67.0 bits (140), Expect(2) = 2e-023
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = -2 / -3
Query: 647 TVDLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQC 504
++ + I AV+HYNGNMKPWL I + +YK+ W YVD +Q C
Sbjct: 509 SISMDEINNAAVIHYNGNMKPWLDIALNQYKNLWTKYVDSDMEFVQMC 366
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -2 / -3
Query: 788 RHISLLAGAQCDHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
R + LLA + +WK G+LPPGL+ FY ++LD WHVLGLGY
Sbjct: 653 RTLPLLAEQE*RPDIWKSGTLPPGLITFYSTTKSLDKSWHVLGLGY 516
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 64.8 bits (135), Expect(3) = 3e-023
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -2 / +2
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
+ TLWKLG+LPPGL+ +Y + LD WHVLGLGY
Sbjct: 485 NRTLWKLGTLPPGLITYYSTTKPLDKSWHVLGLGY 589
Score = 46.4 bits (95), Expect(3) = 3e-023
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3 / +2
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN DL WR T YHYWQ N
Sbjct: 395 WAYGMNFFDLDAWRRVKCTEEYHYWQNLN 481
Score = 36.3 bits (73), Expect(3) = 3e-023
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2 / +2
Query: 647 TVDLATIKEGAVLHYNGNMKPW 582
++ + I AV+H+NGNMKPW
Sbjct: 596 SISMDEINNAAVVHFNGNMKPW 661
>gb|CG956619.1|CG956619 MBEFU73TF mth2 Medicago truncatula genomic clone 47M1, DNA sequence
Length = 786
Score = 65.7 bits (137), Expect(3) = 4e-023
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 267 DLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGY 371
Score = 55.6 bits (115), Expect(3) = 4e-023
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / +3
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
+L K V+H+NG KPWL I + K W YVD+S I+ C +R
Sbjct: 384 NLVDAKNAGVVHFNGWAKPWLDIAFPQLKPLWTKYVDFSDNFIESCHIR 530
Score = 29.5 bits (58), Expect(3) = 4e-023
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 808 WRNKNVTGIYHYWQER 761
WR N++ YHYW E+
Sbjct: 5 WRKTNISYTYHYWVEQ 52
>gb|CG921442.1|CG921442 MBEFI44TR mth2 Medicago truncatula genomic clone 44G15, DNA
sequence
Length = 776
Score = 57.0 bits (118), Expect(3) = 2e-022
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D LWKLG+LPPGL+ F+ L+ WHVLGLGY
Sbjct: 547 DRQLWKLGTLPPGLMTFWKHTFPLNRSWHVLGLGY 651
Score = 46.0 bits (94), Expect(3) = 2e-022
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 605 YNGNMKPWLKIGMEKYKSFWDNY 537
YNGNMKPWL+I ++K++ +W Y
Sbjct: 706 YNGNMKPWLEISIQKFQGYWTKY 774
Score = 45.5 bits (93), Expect(3) = 2e-022
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 832 MNVLDLVEWRNKNVTGIYHYWQE 764
MNV DLVEW+ +N+T +YH WQ+
Sbjct: 345 MNVFDLVEWKKQNITEVYHKWQK 413
>gb|BI271827.1|BI271827 NF012D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF012D10FL 5', mRNA sequence
Length = 685
Score = 68.9 bits (144), Expect(2) = 9e-022
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGYT 648
D LWKLG+LPPGL+ FYGL L+ WHVLGLGY+
Sbjct: 561 DRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYS 668
Score = 56.1 bits (116), Expect(2) = 9e-022
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -3 / +3
Query: 844 WAFGMNVLDLVEWRNKNVTGIYHYWQERN 758
WA+GMN+ DL EW+ ++TGIYH WQ N
Sbjct: 471 WAYGMNIFDLKEWKKXDITGIYHKWQNMN 557
>gb|CG938710.1|CG938710 MBEEA61TRC mth2 Medicago truncatula genomic clone 36K1, DNA
sequence
Length = 765
Score = 65.7 bits (137), Expect(3) = 2e-021
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2 / +1
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 262 DLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGY 366
Score = 55.6 bits (115), Expect(3) = 2e-021
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / +1
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
+L K V+H+NG KPWL I + K W YVD+S I+ C +R
Sbjct: 379 NLVDAKNAGVVHFNGWAKPWLDIAFPQLKPLWTKYVDFSDNFIESCHIR 525
Score = 24.0 bits (46), Expect(3) = 2e-021
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3 / +3
Query: 805 RNKNVTGIYHYWQER 761
R N++ YHYW E+
Sbjct: 3 RKTNISYTYHYWFEQ 47
>gb|CG946208.1|CG946208 MBEEA63TRC mth2 Medicago truncatula genomic clone 36K5, DNA
sequence
Length = 912
Score = 65.7 bits (137), Expect(3) = 6e-021
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -2 / +3
Query: 755 DHTLWKLGSLPPGLLAFYGLVEALDPKWHVLGLGY 651
D +LW LG+LPPGL+AF+G V +DP WH+LGLGY
Sbjct: 261 DLSLWHLGTLPPGLIAFHGNVHTIDPFWHMLGLGY 365
Score = 55.6 bits (115), Expect(3) = 6e-021
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -2 / +3
Query: 641 DLATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDNYVDYSHPLIQQCFMR 495
+L K V+H+NG KPWL I + K W YVD+S I+ C +R
Sbjct: 378 NLVDAKNAGVVHFNGWAKPWLDIAFPQLKPLWTKYVDFSDNFIESCHIR 524
Score = 22.6 bits (43), Expect(3) = 6e-021
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3 / +2
Query: 796 NVTGIYHYWQER 761
N++ YHYW E+
Sbjct: 11 NISYTYHYWVEQ 46
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,026,000,027
Number of Sequences: 392609
Number of extensions: 16310923
Number of successful extensions: 72325
Number of sequences better than 1.0e-020: 41
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 28611862015
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)